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In 2010, I received a PhD in Biology from the University of Aveiro (EUR>80k FCT mixed PhD studentship SFRH/BD/19640/2004), resulting in two papers. Afterward, I collaborated with the IEC in Portugal on Science outreach and produced several manuals. In 2012, I resumed my scientific career after obtaining funding (EUR>7K) through the European Commission Lifelong Learning Programme for a Leonardo da Vinci Post-Doc traineeship at the Professor Timothy R. Walsh lab (School of Medicine, Cardiff University): Animals, clinical environment, water and patients colonised and infected with multidrug-resistant Gram-negative bacteria (MDR-GNB) carrying blaNDM and blaCTXM15 in Karachi, Pakistan. Presentations in conferences and two undergraduate students supervision resulted from this work. In August 2013, I was appointed as a research associate for R-GNOSIS (EC/FP7/282512/EU). European project exploring cutting-edge interventions to reduce carriage, infection and spread of MDR-GNB. I was responsible for the molecular microbiology support for the clinical work packages and performed audits to labs involved in the study. Presentations at conferences resulted from this work. From March 2015, I was research associate and lead scientist for BARNARDS, a combination of two research programs, USD4.28M (OPP1119772) and USD849K (OP1191522; co-applicant), funded by the Bill & Melinda Gates Foundation. BARNARDS developed a network and analytical tools to understand the burden of antimicrobial resistance, risk factors and microbiological causes of infant sepsis across 12 clinical sites in seven LMICs in Africa and South-Asia. Several publications resulted from this work. I supervised staff, students and lab visitors from the BARNARDS network; I liaised with project funders, collaborators and other stakeholders. I was given the ISF/ESCMID Sepsis Award 2019 for my outstanding work during BARNARDS. I showcased TRW lab research in outreach events. In April 2019, my family and I decided to move back to Portugal. Given my proficiency in Oxford Nanopore Technologies methods, I was recruited as a contracted researcher in iBiMED, UA, for the project CANCYL (PTDC/BIA-MIC/31849/2017). I implemented ONT sequencing and data analysis and ONT & Illumina hybrid analysis pipelines for the study and genomic surveillance of fungi and characterisation of the genetic microdiversity of clinically important Candida spp. from different human sources in the context of commensalism and disease. Publications resulted from this work. Currently, I am contracted under the project FunResist (PTDC/BIA-MIC/1141/2021) to identify genetic markers of antifungal resistance, combining combining population genomics, GWAS and eQTL mapping. I supervise and tutor students. I was a member of iBiMED volunteer taskforce for the screening of SARS-CoV-2 for COVID-19 diagnosis in the Centre region of Portugal. I am a member of the steering committees of iBiMED GreenLab and GreenLabs Portugal to promote sustainable research activities in biomedical research. I am a Program Based Learning tutor and a supervisor of Research in Biomedicine of the Biomedical Sciences degree at the Department of Medical Sciences in UA; I am involved in Science outreach activities of iBiMED and UA such as Junior/Summer Academy and TechDays. I was a jury member for two MsC theses, peer-review research articles for various journals, and review research proposals (UKRI; COST actions). My research interests are Microbiology, Genomics, Metagenomics and Bioinformatics analysis for the characterisation of microbes and microbiota associated with disease and integrate multimodal data to study the microbiota interactions with biotic and abiotic factors. I was on maternity leave between August 2016 and February 2017. To be able to cope personal and professional development, namely by having an important role in impactful and purposeful projects as BARNARDS while being a mother is, for me, a great accomplishment.
Identificação

Identificação pessoal

Nome completo
Maria João Mendes de Carvalho
Data de nascimento
1978/10/23
Género
Feminino

Nomes de citação

  • MJ Carvalho

Identificadores de autor

Ciência ID
2B1C-C120-B274
ORCID iD
0000-0001-6819-927X

Endereços de correio eletrónico

  • mjcarvalho@ua.pt (Profissional)

Telefones

Telefone
  • (+351) 234370200 Ext.: 22126 (Profissional)

Moradas

  • Department of Medical Sciences & Institute for Biomedicine, University of Aveiro, Agras do Crasto, 3810-193 , Aveiro, Aveiro, Portugal (Profissional)

Websites

Domínios de atuação

  • Ciências Naturais - Ciências Biológicas - Microbiologia
  • Ciências Naturais - Ciências Biológicas - Genética e Hereditariedade
  • Ciências Exatas - Ciências da Computação e da Informação - Bioinformática
  • Ciências Naturais - Ciências Biológicas - Biologia Molecular
  • Ciências Médicas e da Saúde - Ciências da Saúde - Doenças Infeciosas

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Português (Idioma materno)
Inglês Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2)
Espanhol; Castelhano Utilizador independente (B2) Utilizador proficiente (C1) Utilizador elementar (A2) Utilizador proficiente (C1) Utilizador proficiente (C1)
Formação
Grau Classificação
2004/11 - 2010/10/28
Concluído
Biologia (Doutoramento)
Universidade de Aveiro Departamento de Biologia, Portugal

Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
"Diversity of Aeromonas species from different environments in Portugal" (TESE/DISSERTAÇÃO)
Approved
2003/06/03
Concluído
Biologia e Geologia (Ensino de) (Licenciatura)
Universidade de Trás-os-Montes e Alto Douro, Portugal
16/20
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento
Empregador
2022/11/01 - Atual Investigador Contratado (Investigação) Universidade de Aveiro Instituto de Biomedicina, Portugal
Universidade de Aveiro Instituto de Biomedicina, Portugal
2019/05 - 2022/06 Investigador Contratado (Investigação) Universidade de Aveiro Instituto de Biomedicina, Portugal
Universidade de Aveiro Instituto de Biomedicina, Portugal
2013/04/18 - 2013/07/31 Pós-doutorado (Investigação) Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Cardiff University School of Medicine, Reino Unido
2012/09/22 - 2013/04/17 Pós-doutorado (Investigação) Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Cardiff University School of Medicine, Reino Unido

Outras Carreiras

Categoria Profissional
Instituição de acolhimento
Empregador
2011/01/31 - 2012/07/31 Carreiras / Categorias Subsistentes Instituto de Educação e Cidadania, Portugal

Outros

Categoria Profissional
Instituição de acolhimento
Empregador
2015/03/01 - 2019/04 Research Associate; Lead Scientist (Research) Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Cardiff University School of Medicine, Reino Unido
2013/08/01 - 2015/02/28 Research Associate (Research) Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Cardiff University School of Medicine, Reino Unido
Projetos

Bolsa

Designação Financiadores
2012/09/22 - 2013/04/17 Animals, clinical environment, water and patients colonised and infected with multidrug-resistant Gram-negative bacteria (MDR-GNB) carrying blaNDM and blaCTXM15 in Karachi, Pakistan - a one health approach
2012-1-PT1-LEO02-11437
Bolseiro de Pós-Doutoramento
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
European Commission
Concluído
2004/11/01 - 2010/10/28 DIVERSITY OF AEROMONAS SPECIES FROM DIFFERENT ENVIRONMENTS IN PORTUGAL
info:eu-repo/grantAgreement/FCT/SFRH/SFRH2%FBD2%F196402%F2004/PT
Bolseiro de Doutoramento
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal

Universidade de Aveiro Departamento de Biologia, Portugal
Fundação para a Ciência e a Tecnologia
Concluído

Projeto

Designação Financiadores
2022/11/01 - Atual FunResist - Finding new genetic markers of antifungal resistance in the fungal pathogen Candida albicans
PTDC/BIA-MIC/1141/2021
Investigador
Universidade de Aveiro Instituto de Biomedicina, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2019/05 - 2022/06/30 Exploring the genome of the emergent pathogenic fungus Candida rugosa - CANCYL
PTDC/BIA-MIC/31849/2017
Investigador
Universidade de Aveiro Instituto de Biomedicina, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2018/04 - 2018/12 BARNARDS
OP1191522
Outra
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Bill & Melinda Gates Foundation
Em curso
2015/04 - 2018/03 BARNARDS
OPP1119772
Outra
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
Bill & Melinda Gates Foundation
Em curso
2013 - 2015 Resistance in Gram-Negative Organisms: Studying Intervention Strategies
Outra
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
European Commission
Concluído
Produções

Publicações

Artigo em revista
  1. Nieto-Rosado, Maria; Sands, Kirsty; Portal, Edward A. R.; Thomson, Kathryn M.; Carvalho, Maria J.; Mathias, Jordan; Milton, Rebecca; et al. "Colonisation of hospital surfaces from low- and middle-income countries by extended spectrum ß-lactamase- and carbapenemase-producing bacteria". Nature Communications 15 1 (2024): http://dx.doi.org/10.1038/s41467-024-46684-z.
    Acesso aberto • Publicado • 10.1038/s41467-024-46684-z
  2. Portal, E. A. R.; Sands, K.; Farley, C.; Boostrom, I.; Jones, E.; Barrell, M.; MJ Carvalho; et al. "Characterisation of colistin resistance in Gram-negative microbiota of pregnant women and neonates in Nigeria". Nature Communications 15 1 (2024): http://dx.doi.org/10.1038/s41467-024-45673-6.
    10.1038/s41467-024-45673-6
  3. Sharmi Naha; Priyanka Basak; Kirsty Sands; Rebecca Milton; Maria J. Carvalho; Shravani Mitra; Amrita Bhattacharjee; et al. "Carriage and within-host diversity of mcr-1.1- harboring Escherichia coli from pregnant mothers: inter- and intra-mother transmission dynamics of mcr-1.1". Emerging Microbes & Infections (2023): http://dx.doi.org/10.1080/22221751.2023.2278899.
    10.1080/22221751.2023.2278899
  4. Carvalho, M. J.; Sands, K.; Thomson, K.; Portal, E.; Mathias, J.; Milton, R.; Gillespie, D.; et al. "Antibiotic resistance genes in the gut microbiota of mothers and linked neonates with or without sepsis from low- and middle-income countries". Nature Microbiology 7 9 (2022): 1337-1347. http://dx.doi.org/10.1038/s41564-022-01184-y.
    Acesso aberto • Publicado • 10.1038/s41564-022-01184-y
  5. Sands, Kirsty; Carvalho, Maria J.; Spiller, Owen B.; Portal, Edward A. R.; Thomson, Kathryn; Watkins, William John; Mathias, Jordan; et al. "Characterisation of Staphylococci species from neonatal blood cultures in low- and middle-income countries". BMC Infectious Diseases 22 1 (2022): http://dx.doi.org/10.1186/s12879-022-07541-w.
    Publicado • 10.1186/s12879-022-07541-w
  6. Milton, Rebecca; Gillespie, David; Dyer, Calie; Taiyari, Khadijeh; Carvalho, Maria J; Thomson, Kathryn; Sands, Kirsty; et al. "Neonatal sepsis and mortality in low-income and middle-income countries from a facility-based birth cohort: an international multisite prospective observational study". The Lancet Global Health 10 5 (2022): e661-e672. http://dx.doi.org/10.1016/s2214-109x(22)00043-2.
    Acesso aberto • 10.1016/s2214-109x(22)00043-2
  7. Thomson, Kathryn M; Dyer, Calie; Liu, Feiyan; Sands, Kirsty; Portal, Edward; Carvalho, Maria J; Barrell, Matthew; et al. "Effects of antibiotic resistance, drug target attainment, bacterial pathogenicity and virulence, and antibiotic access and affordability on outcomes in neonatal sepsis: an international microbiology and drug evaluation prospective substudy (BARNARDS)". The Lancet Infectious Diseases 21 12 (2021): 1677-1688. http://dx.doi.org/10.1016/s1473-3099(21)00050-5.
    10.1016/s1473-3099(21)00050-5
  8. Solomon, Semaria; Akeju, Oluwasefunmi; Odumade, Oludare A.; Ambachew, Rozina; Gebreyohannes, Zenebe; Van Wickle, Kimi; Abayneh, Mahlet; et al. "Prevalence and risk factors for antimicrobial resistance among newborns with gram-negative sepsis". PLOS ONE 16 8 (2021): e0255410. http://dx.doi.org/10.1371/journal.pone.0255410.
    10.1371/journal.pone.0255410
  9. Bezerra, Ana Rita; Oliveira, Carla; Correia, Inês; Guimarães, Ana Rita; Sousa, Gonçalo; MJ Carvalho (2B1C-C120-B274); Moura, Gabriela; Santos, Manuel A S. "The role of non-standard translation in Candida albicans pathogenesis". FEMS Yeast Research 21 4 (2021): http://dx.doi.org/10.1093/femsyr/foab032.
    Acesso aberto • 10.1093/femsyr/foab032
  10. Sands, Kirsty*; MJ Carvalho (2B1C-C120-B274)*; Portal, Edward; Thomson, Kathryn; Dyer, Calie; Akpulu, Chinenye; Andrews, Robert; et al. "Characterization of antimicrobial-resistant Gram-negative bacteria that cause neonatal sepsis in seven low- and middle-income countries". Nature Microbiology 6 4 (2021): 512-523. http://dx.doi.org/10.1038/s41564-021-00870-7.
    Acesso aberto • 10.1038/s41564-021-00870-7
  11. Stewardson, Andrew J; Marimuthu, Kalisvar; Sengupta, Sharmila; Allignol, Arthur; El-Bouseary, Maisra; Carvalho, Maria J; Hassan, Brekhna; et al. "Effect of carbapenem resistance on outcomes of bloodstream infection caused by Enterobacteriaceae in low-income and middle-income countries (PANORAMA): a multinational prospective cohort study". The Lancet Infectious Diseases 19 6 (2019): 601-610. http://dx.doi.org/10.1016/s1473-3099(18)30792-8.
    10.1016/s1473-3099(18)30792-8
  12. Hinchliffe, Philip; Yang, Qiu E.; Portal, Edward; Young, Tom; Li, Hui; Tooke, Catherine L.; MJ Carvalho (2B1C-C120-B274); et al. "Insights into the Mechanistic Basis of Plasmid-Mediated Colistin Resistance from Crystal Structures of the Catalytic Domain of MCR-1". Scientific Reports 7 1 (2017): http://dx.doi.org/10.1038/srep39392.
    Acesso aberto • Publicado • 10.1038/srep39392
  13. Martínez-Murcia, Antonio; Beaz-Hidalgo, Roxana; Navarro, Aaron; MJ Carvalho (2B1C-C120-B274); Aravena-Román, Max; Correia, Antonio; Figueras, Mª. José; Saavedra, Mª. José. "Aeromonas lusitana sp. nov., Isolated from Untreated Water and Vegetables". Current Microbiology 72 6 (2016): 795-803. http://dx.doi.org/10.1007/s00284-016-0997-9.
    Publicado • 10.1007/s00284-016-0997-9
  14. Jones, L.S.; MJ Carvalho (2B1C-C120-B274); Toleman, M.A.; White, P.L.; Connor, T.R.; Mushtaq, A.; Weeks, J.L.; et al. "Characterization of plasmids in extensively drug-resistant Acinetobacter strains isolated in India and Pakistan". Antimicrobial Agents and Chemotherapy 59 2 (2015): 923-929. http://www.scopus.com/inward/record.url?eid=2-s2.0-84921788936&partnerID=MN8TOARS.
    Acesso aberto • Publicado • 10.1128/AAC.03242-14
  15. MJ Carvalho (2B1C-C120-B274); Martínez-Murcia, Antonio; Esteves, Ana Cristina; Correia, António; Saavedra, Maria José. "Phylogenetic diversity, antibiotic resistance and virulence traits of Aeromonas spp. from untreated waters for human consumption". International Journal of Food Microbiology 159 3 (2012): 230-239. http://dx.doi.org/10.1016/j.ijfoodmicro.2012.09.008.
    Acesso aberto • 10.1016/j.ijfoodmicro.2012.09.008
Capítulo de livro
  1. MJ Carvalho; J Tyrrell; LS Jones; Timothy R Walsh. "On the road again – the antibiotic resistance superhighway". In The Battle Against Microbial Pathogens: Basic Science, Technological Advances and Educational Programs, editado por Méndez-Vilas, A., 955-964. Badajoz, Espanha: Formatex Research Center, 2015.
    Publicado
Livro
  1. Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 4º a 6º anos; Tema I: Ciências Físicas, Matemática, Terra e Espaço. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2018.
    Publicado
  2. Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 4º a 6º anos; Tema III: Ciências da Vida. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2018.
    Publicado
Manual
  1. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais: Atividades de Verão 2º ciclo. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2017.
    Publicado
  2. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Matemática Divertida: Atividades de verão 2º ciclo. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2017.
    Publicado
  3. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais: Atividades de Verão 1º e 2º ciclos;. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2016.
    Publicado
  4. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 1º e 2º anos; Tema II: Ciências Químicas e da Vida. Mamarrosa, Portugal: Instituto de Educação e Cidadania IEC. 2015.
    Publicado
  5. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 3º ano; Tema II: Ciências Químicas e da Vida. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2015.
    Publicado
  6. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 4º a 6º anos; Tema II: Ciências Químicas e Transformações. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2015.
    Publicado
  7. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 4º a 6º anos; Tema III: Ciências da Vida. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2015.
    Publicado
  8. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Matemática Divertida: Atividades de verão 2º ciclo. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2015.
    Publicado
  9. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Woody e a Floresta Urbana, 1º e 2º ciclos. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2015.
    Publicado
  10. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 1º e 2º anos; Tema I: Ciências Físicas, Terra e Espaço. Mamarrosa, Portugal: Instituto de Educação e Cidadania IEC. 2014.
    Publicado
  11. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 3º ano; Tema I: Ciências Físicas, Terra e Espaço. Mamarrosa, Portugal. 2014.
    Publicado
  12. Ana Santos-Carvalho (031D-3DFB-2713); Alexandra Oliveira; Gabriela Tavares; MJ Carvalho; Nuno Santos; Sónia Ferreira (A41A-A6EE-9365). Ciências Experimentais 4º a 6º anos; Tema I: Ciências Físicas, Matemática, Terra e Espaço. Mamarrosa, Portugal: INSTITUTO DE EDUCACAO E CIDADANIA IEC. 2014.
    Publicado
Poster em conferência
  1. MJ Carvalho; Pinheiro, Miguel; Reis, Andreia; Ana Rita Bezerra (D51F-435D-14EB); Manuel Santos (E312-AA71-68FC); Gabriela Moura (C419-8D2C-07A1). "Unveiling the genome of Limtongozyma cylindracea". Trabalho apresentado em III International Meeting of the Portuguese Society of Genetics, 2022.
  2. MJ Carvalho; Catarina Silva; Ana Rita Guimarães; Ana Rita Bezerra (D51F-435D-14EB); Miguel Pinheiro; Manuel Santos (E312-AA71-68FC); Gabriela Moura (C419-8D2C-07A1). "Paving the way for genomic surveillance, phylogenomics and overall characterisation of Candida sp. isolates". Trabalho apresentado em 2nd GenomePT Symposium, 2021.
  3. MJ Carvalho (2B1C-C120-B274)*; Moura, Gabriela; Miguel Pinheiro. Autor correspondente: MJ Carvalho (2B1C-C120-B274)*. "De novo assembly and annotation of the Candida cylindracea genome". Trabalho apresentado em Oxford Nanopore Technologies London Calling 2021, 2021.
  4. MJ Carvalho; Miguel Pinheiro; Manuel Santos (E312-AA71-68FC); Gabriela Moura (C419-8D2C-07A1). "De novo assembly and annotation of the Candida cylindracea genome: a pipeline for rare organisms". Trabalho apresentado em Bioinformatics Open Days (X Edition) 2021, 2021.
  5. MJ Carvalho. "Incidence of neonatal sepsis from hospitals in South Asia and Africa. The Burden of Antibiotic Resistance in Neonates in Developing Societies (BARNARDS) - a group study. P2443". Trabalho apresentado em 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2019.
  6. MJ Carvalho. "Risk factors of neonatal sepsis from hospitals in South Asia and Africa. The Burden of Antibiotic Resistance in Neonates from Developing Societies (BARNARDS) a group study. P2447". Trabalho apresentado em 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2019.
  7. MJ Carvalho. "Caesarean sections as a potential risk factor for development of neonatal sepsis. EV0518". Trabalho apresentado em 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2017.
  8. MJ Carvalho. "High levels of AMR Enterobacteriaceae present in the maternal faecal flora in low-middle income countries. P1115". Trabalho apresentado em 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2017.
  9. MJ Carvalho. "High Levels of AMR Enterobacteriaceae in the environment of maternity and neonatal units in low-middle income countries. EV0550". Trabalho apresentado em 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2017.
  10. MJ Carvalho. "Characterisation of betalactam resistance mechanisms among UTI isolates collected from women attending primary care across Europe – RGNOSIS. P0730.". Trabalho apresentado em 26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2016.
  11. MJ Carvalho. "Prevalence, socio-demographic and hygiene profile of patients with blaNDM in a tertiary-care hospital in urban Pakistan. P1068". Trabalho apresentado em 25th European Congress of Clinical Microbiology and Infectious Diseases, 2015.
  12. MJ Carvalho. "Extremely-drug resistant and phylogenetically diverse bacteria carrying blaNDM are common among patients from Civil Hospital Karachi, Pakistan. EV0862.". Trabalho apresentado em 25th European Congress of Clinical Microbiology and Infectious Diseases, 2015.
  13. MJ Carvalho. "Characterisation of E. coli isolates carrying blaNDM from the normal flora of patients admitted to a South Asian hospital. P1178". Trabalho apresentado em 26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2015.
  14. MJ Carvalho; et al; Walsh, Timothy R.. "Community carriage and nosocomial acquisition of blaNDM in hospitals in Karachi: a cohort study. P1214.". Trabalho apresentado em 24th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2014.
  15. Mushtaq, A.; MJ Carvalho; et al; Walsh, Timothy R.. "Frequency of carriage of New Delhi metallo beta-lactamase-1 (NDM-1) and CTX-M-15 among patients from hospitals in Karachi: preliminary data assessing risk factors for carriage and infection. P1299". Trabalho apresentado em 23rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2013.

Outros

Técnica de investigação
  1. This protocol is intended to guide users in creating genomic libraries for MinION & GridION sequencing, using Oxford Nanopore’s SQK-RBK004 rapid kit with high molecular weight microbial gDNA.. Coinvestigador. Ian Boostrom; MJ Carvalho; Refath Farzana; Edward Portal; Kirsty Sands.
    dx.doi.org/10.17504/protocols.io.byhnpt5e • Coinvestigador
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2024/09 Genetic diversity of commensal and clinical Candida albicans isolates XXII Jornadas de Biologia de Leveduras Professor Nicolau van Uden
(Portugal)
2024/05 Genomics for the study of microbial pathogens VII iBiMED Symposium: Sharing Science, Inspiring Progress
Institute of Biomedicine, University of Aveiro (Aveiro, Portugal)
2021/05 One bioinformatics pipeline for genomic characterisation of Candida sp. clinical strains BOD X - 10th Bioinformatics Open Days
University of Minho (Braga, Portugal)
2019/10/11 Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens: Characterisation of gut bacterial isolates and bacteria causing infection in low- and middle-income countries Institute of Biomedicine and Department of Medical Sciences Autumn Seminar Series
Institute of Biomedicine and Department of Medical Sciences - University of Aveiro (Aveiro, Portugal)
2019/04 Insights into the normal microbiota of mothers, infants and clinical environment, and genomes of isolates causing sepsis in infants from low- and middle-income countries (BARNARDS). 29th European Congress of Clinical Microbiology and Infectious Diseases
European society of medical microbiology and infectious diseases (Amsterdam, Países Baixos)
2019/04 Whole genome characterisation of bacterial isolates causing sepsis in infants in low-middle income countries (BARNARDS). 29th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Amsterdam, Países Baixos)
2019 Burden of Antibiotic Resistance in Neonates from Developing Societies (BARNARDS) – Klebsiella pneumoniae in neonatal sepsis. O0873 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Medical Microbiology and Infectious Diseases (Amsterdam, Países Baixos)
2018/06/28 Global antimicrobial resistance: Why now? Superbugs – The End of Modern Medicine as we know it?
Techniquest (Cardiff, Reino Unido)
2018 Bacteria fighting back. Pint of Science 2018
Pint of Science (Cardiff, Reino Unido)
2017/04 The impact of carbapenem resistance on outcomes of bloodstream infections with Enterobacteriaceae in developing countries: an international prospective cohort study 27th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Vienna, Áustria)
2015/04 Environmental dissemination of MDRB carrying blaNDM and blaCTX-M-15 in hospital environment, drinking water, birds and insects. 25th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Copenhagen, Dinamarca)
2013 blaNDM community carriage and nosocomial acquisition in a tertiary-care hospital in Karachi, Pakistan: A Cohort Study. Microbiology & Infection Translational Research Group (MITReG) Annual Symposium for Translational Infection Research in Wales, Swansea-Wales, UK.
Translational Infection Research in Wales (Swansea, Reino Unido)
2013 Risk Factors for blaNDM Community Carriage and Nosocomial Acquisition in a Tertiary-Care Hospital in Karachi, Pakistan. 53rd Interscience Conference on Antimicrobial Agents and Chemotherapy
American Society for Microbiology (Denver, Estados Unidos)

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2024/09 - Atual Genetic markers of antifungal resistance in Candida species
Coorientador de Doménica Riviera
Masters in Molecular Medicine (Mestrado)
Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2023/09/15 - 2024/12/13 Unravelling the phenotypic and genetic diversity among clinical isolates of the human fungal pathogen Candida albicans. https://ria.ua.pt/handle/10773/43750
Coorientador
Masters in Microbiology (Mestrado)
Universidade de Aveiro Departamento de Biologia, Portugal
2021/09 - 2022/12/13 Genetic characterisation of Candida albicans isolates from distinct clinical human samples and the clinical environment
Coorientador de Filipa Azevedo Sampaio
Masters in Microbiology (Mestrado)
Universidade de Aveiro Departamento de Biologia, Portugal
2017/09 - 2018/09 Prevalence of NDM-1, KPC, OXA-48-like, and CTX-M-15 among mothers, neonates and the clinical environment in Islamabad, Pakistan. Supervision of a Professional Training Year student. The work, under BARNARDS umbrella, aimed at developing students learning and research skills like producing and analysing original data, for pursuit of a career in science. The student achieved first class honours. The student was mentioned in the acknowledgements of all papers stemming from BARNARDS and co-authored presentations in conferences.
Orientador de Habiba Saif
Biochemistry (Licenciatura/Bacharelato)
Cardiff University School of Medicine, Reino Unido

Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
2017/09 - 2018/09 Antimicrobial resistance traits among the normal microbiota of mothers, neonates and the clinical environment from Nigeria. Supervision of a Professional Training Year student. The work, under BARNARDS umbrella, aimed at developing students learning and research skills like producing and analysing original data, for pursuit of a career in science. The student achieved first class honours. The student was mentioned in the acknowledgements of all papers stemming from BARNARDS and co-authored conferences¿ presentations.
Orientador de Patrick Hogan
Biochemistry (Licenciatura/Bacharelato)
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
2015/09 - 2016/09 Characterisation of E. coli isolates carrying blaNDM from the normal microbiota of patients admitted to a South Asian hospital. Supervision of a Professional Training Year student. Work aimed at developing students learning and research skills like producing and analysing original data, for pursuit of a career in science. The student achieved an upper-second class honours (presentation in international conference).
Orientador de Ben McCarthy
Biochemistry (Licenciatura/Bacharelato)
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido

Organização de evento

Nome do evento
Tipo de evento (Tipo de participação)
Instituição / Organização
2018/11/23 - 2018/11/23 Meeting of Post-doctoral researchers of the Systems Immunity University Research Institute (SIURI) at Cardiff University to present and discuss available high end technologies and how they were being used by the different groups in the Division. This event aimed at fostering collaborations and the development of careers. There were four sessions with four talks each and a plenary session. (2018/11/23 - 2018/11/23)
Simpósio (Membro da Comissão Organizadora)
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido
2018/06/28 - 2018/06/28 Superbugs – The End of Modern Medicine as we know it? Public engagement event in partnership with industry and charities (2018/06/28 - 2018/06/28)
Exposição (Membro da Comissão Organizadora)
Cardiff University Cardiff Institute of Infection and Immunity, Reino Unido

Techniquest, Reino Unido

Participação em evento

Descrição da atividade
Tipo de evento
Nome do evento
Instituição / Organização
2019/10/07 - 2019/10/13 Event gathering distinct stakeholders to discuss, showcase and promote Information and Communication Technologies, with the aim of improving the transfer of knowledge between Universities and Industry, explore ideas for increasing innovation in the area of ICT and raise public awareness of the sector's relevance and its importance for the country's modernisation. I participated to showcase the research performed at iBiMED, University of Aveiro, namely, the use of next generation sequencing and bioinformatics tools in Biomedicine.
Exposição
TechDays
Câmara Municipal de Aveiro, Portugal
2018/10/15 - 2018/10/18 Grand Challenges is a family of initiatives fostering innovation to solve key global health and development problems. It aims to accelerate the translation of innovation to impact to address the world’s most urgent global health and development problems. The meeting is a forum for researchers to share their work, learn about cutting-edge advances in the field and build collaborations with other investigators and organisations. In 2018, the meeting partially overlapped with the 10th World Health Summit.
Encontro
Grand Challenges Annual Meeting 2018 / 10th World Health Summit
German Federal Ministry of Education & Research, Alemanha

Bill & Melinda Gates Foundation, Estados Unidos

United States Agency for International Development, Estados Unidos

Grand Challenges Canada, Canadá
2017/06 - 2017/06 This event aims to foster closer relations between the Welsh science and engineering community with the National Assembly and Welsh Government (https://www.cardiff.ac.uk/news/view/775889-science-and-the-assembly). I have showcased the latest world-leading expertise on Antimicrobial Resistance research done in Cardiff University Systems Immunity Research Institute, particularly in the Walsh lab, to policy makers, politicians and the public.
Simpósio
Science and the Assembly
Royal Society of Chemistry, Reino Unido

National Assembly for Wales, Reino Unido

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2015 Epidemiology of ß-lactamase producing isolates
Arguente principal
Inês Abrantes Cravo Roxo (Mestrado)
Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2011 Microbiota in Solea spp. in the Public Health Context
Arguente principal
Nuno Miguel Mezia Lopes (Mestrado)
Universidade de Aveiro Departamento de Química, Portugal

Membro de associação

Nome da associação Tipo de participação
2012/01/01 - Atual European Society Clinical Microbiology and Infectious Diseases Member

Tutoria

Tópico Nome do aluno
2019/09 - 2021/02/22 Genetic diversity and antifungal susceptibility profile of ten clinical isolates of Candida spp. Catarina Almeida e Silva
2013/09 - 2014/07 An international perspective of antibiotic resistance in the community. Sara Aguiar
Distinções

Prémio

2019 ISF/ESCMID Sepsis Award
International Sepsis Forum, Estados Unidos

European Society of Clinical Microbiology and Infectious Diseases, Suiça