Identification
Personal identification
- Full name
- Magdalena Ksiezarek
Citation names
- Ksiezarek, M
Author identifiers
- Ciência ID
- 501F-D919-A2F7
- ORCID iD
- 0000-0003-1088-5394
- Researcher Id
- T-8991-2017
Email addresses
- up201509334@ff.up.pt (Professional)
Websites
- https://orcid.org/0000-0003-1088-5394 (Professional)
- https://www.requimte.pt/ucibio/people/magdalena-dorota-ksiezarek (Professional)
- http://luisapeixelab.com/research.html (Professional)
- https://twitter.com/MagdalenaKsi (Social media)
Knowledge fields
- Natural sciences - Biological Sciences - Microbiology
- Medical and Health Sciences
- Medical and Health Sciences - Health Sciences - Infectious Diseases
- Medical and Health Sciences - Basic Medicine - Pharmacology and pharmacy
- Medical and Health Sciences - Health Sciences - Epidemiology
Languages
| Language | Speaking | Reading | Writing | Listening | Peer-review |
|---|---|---|---|---|---|
| Polish | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | |
| English | Advanced (C1) | Advanced (C1) | Advanced (C1) | Advanced (C1) | |
| Italian | Intermediate (B1) | Upper intermediate (B2) | Intermediate (B1) | Upper intermediate (B2) | |
| Portuguese | Intermediate (B1) | Intermediate (B1) | Intermediate (B1) | Intermediate (B1) |
Education
| Degree | Classification | |
|---|---|---|
|
2017/09/01 - 2021/10/31
Ongoing
|
PhD Student (Doutoramento)
UCIBIO/REQUIMTE. Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, Portugal, Portugal
|
|
|
2016/09/15 - 2017/08/31
Concluded
|
Research trainee (Outros)
UCIBIO/REQUIMTE. Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, Portugal, Portugal
|
|
|
2016/04/01 - 2016/07/31
Concluded
|
Traineeship in Laboratory of Microbiology under Erasmus+ Exchange Program (Outros)
UCIBIO/REQUIMTE. Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, Portugal, Portugal
|
|
|
2010/10/01 - 2016/03/31
Concluded
|
Uniform Pharmacy Master’s Studies (Mestrado integrado)
Wroclaw Medical University, Poland
"The analysis in vitro of activity of rifampicin with connections ß-lactam antibiotics against multidrug-resistant strains
of Acinetobacter baumannii. " (THESIS/DISSERTATION)
|
17 |
|
2015/10/01 - 2016/03/01
Concluded
|
Traineeship in community pharmacy within the Master in Pharmacy (Outros)
Pharmacy “Lotnicza”, Wroclaw, Poland, Poland
|
|
|
2013/10/01 - 2015/12/31
Concluded
|
Active member of Students Organization “Young Pharmacy” (Outros)
Faculty of Pharmacy, Wroclaw Medical University, Poland, Poland
|
|
|
2015/07/01 - 2015/09/01
Concluded
|
Traineeship in hospital pharmacy under the ERASMUS program (Outros)
Hospital San Giovanni di Dio, Cagliari, Sardinia, Italy, Italy
|
|
|
2013/10/01 - 2015/06/30
Concluded
|
Active member of Student Scientific Society of Microbiologists (Outros)
Department of Microbiology, Faculty of Pharmacy, Wroclaw Medical University, Poland, Poland
|
|
|
2014/09/01 - 2014/09/30
Concluded
|
Traineeship in hospital pharmacy within the Master in Pharmacy (Outros)
Jan Mikulicz-Radecki University Teaching Hospital, Wroclaw, Poland, Poland
|
|
|
2014/02/01 - 2014/07/01
Concluded
|
Master Student of Pharmacy under the ERASMUS program (Outros)
Faculty of Pharmacy, University of Bologna, Italy, Italy
|
|
|
2013/09/01 - 2013/09/30
Concluded
|
Traineeship in community pharmacy within the Master in Pharmacy (Outros)
Pharmacy “Ikar”, Wroclaw, Poland, Poland
|
Affiliation
Others
| Category Host institution |
Employer | |
|---|---|---|
| 2017/09/01 - Current | PhD Student | UCIBIO/REQUIMTE. Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, Portugal, Portugal |
Projects
Grant
| Designation | Funders | |
|---|---|---|
| 2017/09/10 - Current | Comprehensive urinary microbiota profiling: towards better understanding of female urinary tract in health and disease
SFRH/BD/132497/2017
PhD Student Fellow
REQUIMTE / ICETA / Microbiology Department of Faculty of Pharmacy, University of Porto, Portugal
|
Fundação para a Ciência e a Tecnologia, Portugal
Ongoing
|
Outputs
Publications
| Conference abstract |
|
| Conference poster |
|
| Journal article |
|
Other
| Dataset |
|
Activities
Oral presentation
| Presentation title | Event name Host (Event location) |
|
|---|---|---|
| 2020 | Advances in microbiome studies - going beyond species catalogues | Summer School 2020. Module I: Microbiology: Novel
Universidade do Porto Faculdade de Farmacia, Portugal (Porto, Portugal)
|
| 2019 | Paradigm change in female urinary microbiota | Microbiology day, FFUP/ICBAS, Porto, Portugal |
| 2019 | Female urinary tract microbiota profiling: a comprehensive in-depth study | 1st Urobiome meeting, San Diego, USA |
| 2019 | Time to change microbiological approach to overactive bladder | AEU 2019- European Association of Urology, Barcelona, Spain |
| 2017 | Good bacteria, bad bacteria – insights from healthy women urinary microbiota. | Microbiotec 2017- Congress of Microbiology and Biotechnology 2017, Porto |
| 2015 | In vitro activity of carbapenems alone or in combinations with rifampicin against multidrug-resistant strains of Acinetobacter baumannii | 2nd International Forum on Medical Parasitology- Contemporary epidemiological threats, Wroclaw, Poland |
Event organisation
| Event name Type of event (Role) |
Institution / Organization | |
|---|---|---|
| 2018/11/15 - Current | Opening Session of the innovative Citizen Science project "MicroMundo@UPorto" (2018/11/15)
Conference (Member of the Organising Committee)
|
Universidade do Porto Faculdade de Farmácia, Portugal Universidade do Porto Faculdade de Ciências da Nutrição e Alimentação, Portugal, Portugal |
| 2019/05/01 - 2019/07/19 | 1st Workshop MicroMundo@UPorto2019" (2019/05/01)
Workshop (Member of the Organising Committee)
|
Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal Universidade do Porto Faculdade de Ciências da Nutrição e Alimentação, Portugal, Portugal |
Event participation
| Activity description Type of event |
Event name Institution / Organization |
|
|---|---|---|
| 2021/06/25 - 2021/06/25 | The workshop about NGLess which is a domain-specific language for NGS (next-generation sequencing data) processing.
Workshop
|
NGLess tutorial |
| 2021/06/07 - 2021/06/11 | Holistic Bioinformatics Approaches Used in Microbiome Research | Bioinformatics Virtual Coordination Network, BVCN |
| 2021/06/09 - 2021/06/10 | Microbiome Data Congress 2021 | |
| 2021/05/04 - 2021/05/06 | Genome BC's Genomics Forum | British Columbia, A moment of importance for genomics |
| 2021/04/13 - 2021/05/04 | Microbiome Informatics Webinar Series, weekly seminars | Center of Microbiome Science, The Ohio State University |
| 2021/04/22 - 2021/04/22 | Greater Copenhagen Microbiome Summit 2021 | Greater Copenhagen Microbiome Signature Project, Medicon Valley Alliance |
| 2021/04/17 - 2021/04/17 | BISMiS Live - Microbial Systematics | Bergey's International Society for Microbial Systematics (BISMiS) |
| 2021/04/15 - 2021/04/15 | MIT Microbiome Symposium | MIT Center for Microbiome Informatics & Therapeutics |
| 2021/02/28 - 2021/03/06 | Bioinformatics for Biologists course | Wellcome Genome Campus Advanced Courses through Future Learn |
| 2021/02/15 - 2021/02/19 | GTN Smörgåsbord: A Global Galaxy Course | Galaxy platform: NGS Analysis (DNA-seq and RNA-seq), Proteomics |
| 2021/01/25 - 2021/01/29 | EMBL Virtual Course: Exploratory Analysis of Biological Data: Data Carpentry | EMBL Virtual Course: Exploratory Analysis of Biological Data: Data Carpentry
EMBL Heidelberg - The European Molecular Biology Laboratory, Germany
|
| 2021/01/11 - 2021/01/12 | Software Carpentry Workshop @WISE: Shell, R, Git | SWC Workshop for Women in Science & Engineering, University of Michigan |
| 2020/09/20 - 2020/10/20 | Attendee at the Gut Check: Exploring Your Microbiome online course organized by Rob Knight | Gut Check: Exploring Your Microbiome through Coursera |
| 2020/10/05 - 2020/10/09 | Attendee at the Microbiome Bioinformatics with QIIME 2 course, organized by developers of Qiime pipeline for DNA-based microbiota analysis | Microbiome Bioinformatics with QIIME 2 |
| 2020/09/16 - 2020/09/18 | Attendee at the "Open Online Introduction to R" organized by Professor of Methodology and Statistics Wolfgang Viechtbauer | Open Online Introduction to R |
| 2020/07/08 - 2020/08/12 | Attendee at "Microbial 'Omics Seminar Series" organized by A. Murat Eren, Assistant Professor at The Department of Medicine at the University of Chicago | Microbial 'Omics Seminar Series |
| 2020/08/06 - 2020/08/06 | Attendee at the online event "The Gut Brain Axis across the Life Span" presented by Prof. John Cryan, Professor, Sheba Agarwal-Jans, Scientific Editor | Researcher Academy On Campus, CellPress |
| 2020/06/14 - 2020/06/28 | Participation in online course "Bacterial genomes: Accessing and analysing microbial genome data" | Wellcome Genome Campus through Future Learn |
| 2020/05/06 - 2020/05/06 | Attendee at the Microbiome Data Congress 2020 | The Microbiome Data Congress 2020 |
| 2020/04/01 - 2020/04/19 | Participant in online course "Bacterial Genomes: Antimicrobial resistance in bacterial pathogens" | Wellcome Genome Campus through Future Learn |
| 2019/12/05 - 2019/12/07 | Attendee at the MICROBIOTEC´19 with poster presentation
Congress
|
MICROBIOTEC´19
Portuguese Congress of Microbiology and Biotechnology, Portugal
|
| 2019/10/24 - 2019/10/25 | Participation in training course "Statistics for Experimental Life Scientist" led by Professor Martin C. Michel and organized by Faculty of Medicine, University of Porto | "Statistics for Experimental Life Scientist", FMUP |
| 2019/06/20 - 2019/06/24 | Attendee at the ASM Microbe 2019 organized by American Society for Microbiology with poster presentation
Conference
|
ASM Microbe 2019
American Society for Microbiology, United States
|
| 2019/04/29 - 2019/05/21 | Participation in Biostatistics course organized by ISPUP, UP | Introdução à Bioestatística e suas Aplicações em Investigação Clínica e Epidemiológica, ISPUP, UP |
| 2019/04/13 - 2019/04/16 | Attendee at the 29th ECCMID European Congress of Clinical Microbiology and Infectious Diseases with three presentations in
Amsterdam, Netherlands
Congress
|
29th ECCMID European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
|
| 2018/10 - 2019/02 | Participation in Science communication course "Comunicar ciência - Ciências da vida e da saúde" organized in ICBAS | Comunicar ciência - Ciências da vida e da saúde, ICBAS |
| 2018/11/15 - 2018/11/15 | "How to Communicate Science? [Survival Guide 1.0]" given by Raquel Branquinho | Opening session of MicroMundo @UPorto project
Universidade do Porto Faculdade de Farmácia, Portugal
Universidade do Porto Faculdade de Ciências da Nutrição e Alimentação, Portugal |
| 2018/09/16 - 2018/09/19 | Participant in EMBL Symposium: The Human Microbiome held in Heidelberg, Germany
Symposium
|
EMBL Symposium: The Human Microbiome
EMBL Heidelberg - The European Molecular Biology Laboratory, Germany
|
| 2018/08/05 - 2018/08/20 | Participant in online course "Bacterial Genomes: From DNA to protein function using bioinformatics" | Wellcome Genome Campus through Future Learn |
| 2018/07 - 2018/07 | Attendee at Manhã do Departamento de Ciências Biológicas da FFUP and contribution to presentation titled Female Urinary Tract
Microbiota Profiling: An Integrative Approach presented by Luísa Peixe
Meeting
|
Manhã do Departamento de Ciências Biológicas da FFUP
Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal
|
| 2018/04/21 - 2018/04/24 | Attendee at the 28th ECCMID European Congress of Clinical Microbiology and Infectious Diseases with poster presentation in
Madrid, Spain
Congress
|
28th ECCMID European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
|
| 2018/03 - 2018/03 | Attendee at Ciclo de Palestras FFUP-ICBAS and contribution to the presentation Unveiling secrets of urinary microbiota: impact
in the urinary tract diseases, presented by Luísa Peixe
Other
|
Ciclo de Palestras FFUP-ICBAS
Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal |
| 2017/12/07 - 2017/12/09 | Attendee at the MICROBIOTEC´17 with oral communication
Congress
|
MICROBIOTEC´17
Portuguese Congress of Microbiology and Biotechnology, Portugal
|
Association member
| Society Organization name | Role | |
|---|---|---|
| 2019 - Current | American Society for Microbiology ASM | |
| 2018 - Current | European Society of Clinical Microbiology and Infectious Diseases ESCMID | |
| 2016 - Current | UCIBIO@REQUIMTE | |
| 2017 - 2019 | Sociedade Portuguesa de Microbiologia (SPM) |
Course / Discipline taught
| Academic session | Degree Subject (Type) | Institution / Organization | |
|---|---|---|---|
| 2020/09/17 - 2020/09/19 | Summer School 2020. Module I: Microbiology: Novel Technologies. 1.5. Advances in microbiome studies – going beyond species catalogues | Universidade do Porto Faculdade de Farmácia, Portugal | |
| 2017 - 2019 | Guest instructor during practical classes in the curricular unit of Clinical Bacteriology | Clinical Analysis (Mestrado) | Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal |
| 2017 - 2019 | Guest instructor during practical classes in the curricular unit of Bacteriology | Integrated Master's Degree in Pharmaceutical Sciences (Mestrado integrado) | Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal |
| 2017 - 2019 | Guest instructor during practical classes in the curricular unit of Microbiological Quality | Quality Control (Mestrado) | Faculdade de Farmácia da Universidade do Porto, Portugal, Portugal |
Mentoring / Tutoring
| Topic | Student name | |
|---|---|---|
| 2019/01/15 - 2019/03/15 | MicroMundo@UPorto 2019 | Márcia Teixeira, Ana Sofia Gomes, Márcia Moreira |
Distinctions
Award
| 2019 | ASM Travel Grant to attend to ASM Microbe 2019, San Francisco, USA
American Society for Microbiology, United States
|
| 2017 | Individual PhD Studentship
Fundação para a Ciência e a Tecnologia, Portugal
|
