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Juliane Fonseca de Oliveira. Completed the PhD also in Mathematics in 2017/01/17 by University of Porto and University of Coimbra. Completed Bachelor in Mathematics in 2011/07/01 by Federal University of Bahia. Over the last 5 years, I researched, worked on 16 publications and expanded my knowledge toward data architecture and analysis, statistical inference, epidemiology of infectious diseases and their related factors, including healthcare systems structures and social-economic inequities. In addition, I have been committed to science communication and public engagement activities, collaborating with medical practitioners, policy-makers and media in Brazil (https://pamepi.rondonia.fiocruz.br/news.html#midia). I developed technologies that integrate data processes, modelling, visualisation, and scientific communication to solve health problems and improve population life conditions. I completed two post-doctoral fellowships (PF), one research grant, collaborated on four projects and currently, I am a principal investigator of a project funded by the Bill & Melinda Gates and Minderoo Foundations HDR-UK (July/2021 to July/2022).
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Identification

Personal identification

Full name
Juliane Fonseca de Oliveira

Citation names

  • Oliveira, Juliane F

Author identifiers

Ciência ID
FA1C-E6B0-88DE
ORCID iD
0000-0002-7167-8754

Websites

Knowledge fields

  • Exact Sciences - Mathematics
  • Exact Sciences - Mathematics - Applied Mathematics
  • Exact Sciences - Mathematics - Statistics and Probability

Languages

Language Speaking Reading Writing Listening Peer-review
English Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2) Advanced (C1)
Italian Elementary (A2) Elementary (A2) Elementary (A2) Upper intermediate (B2)
Portuguese (Mother tongue)
Education
Degree Classification
2011/09/12 - 2017/01/17
Concluded
 Matemática (Doutoramento)
Major in Sem especialidade
Universidade do Porto Faculdade de Ciências, Portugal
"Bifurcation of Projected Patterns" (THESIS/DISSERTATION)
 Aprovado com distinção
2008/02/01 - 2011/07/01
Concluded
 B.S. Mathematics (Bachelor)
Major in Mathematics
Universidade Federal da Bahia, Brazil
"The Einstein Equation in Flag Manifolds F(3) and F(4)" (THESIS/DISSERTATION)
 8.1
Affiliation

Science

Category
Host institution 		Employer
2021/07/01 - Current Principal Investigator (Research) Centro de Integração de Dados e Conhecimentos para a Saúde, Brazil
Centro de Integração de Dados e Conhecimentos para Saúde, Brazil
(...)
2020/11/01 - 2021/11/30 Invited Principal Investigator (Research) Fundação Oswaldo Cruz Rondonia , Brazil
Fundação Oswaldo Cruz Rondonia , Brazil
(...)
2020 - 2021 Invited Principal Investigator (Research) Center of Data and Knowledge Integration for Health, Brazil
Fundação Oswaldo Cruz, Brazil
Projects

Grant

Designation Funders
2020/10/07 - 2021/11/30 FIOCRUZ PROGRAM FOR INNOVATION FOSTERING - INNOVATIVE IDEAS AND PRODUCTS - COVID 19 STRATEGIC ORDERS
VPPIS-005-FIO-20-2-40
Research Fellow
Fundação Oswaldo Cruz Rondonia , Brazil
 Fundação Oswaldo Cruz
Concluded
2018/07/01 - 2020/10/30 Long-term surveillance platform for Zika and Microcephaly under the Unified Health System of Brazil (SUS)
DIREB-009-FIO-16/SUBP 01
Post-doc Fellow
Fundação Oswaldo Cruz, Brazil

Center of Data and Knowledge Integration for Health, Brazil

Brazilian Ministry of Health, Brazil
Brazilian Ministry of Health

Center of Data and Knowledge Integration for Health

Fundação Oswaldo Cruz
Ongoing
2018/02/01 - 2018/03/31 TB Research Investment Case coordinated by the World Health Organization
OPP1131404
Post-doc Fellow
Liverpool School of Tropical Medicine, United Kingdom

World Health Organisation EDM Documentation Centre, Switzerland
Instituto Gulbenkian de Ciência

Bill and Melinda Gates Foundation US

Fundação para a Ciência e a Tecnologia
Concluded
2016/01/01 - 2017/12/31 Singularities and Algebraic Theory in Dynamical Systems
CAPES-FCT 039/2014
Researcher
Universidade do Porto Centro de Matemática, Portugal

Universidade de São Paulo Câmpus de São Carlos, Brazil
Fundação para a Ciência e a Tecnologia

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior
Concluded
2017/04/17 - 2017/12/16 Modelling and inference for the population and ecosystem health
IF/01346/2014
Post-doc Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Liverpool School of Tropical Medicine, United Kingdom
Governo da República Portuguesa Ministério da Ciência Tecnologia e Ensino Superior

Fundo Europeu de Desenvolvimento Regional

Fundação para a Ciência e a Tecnologia
Concluded

Contract

Designation Funders
2021/07/05 - 2022/07/31 Routine assessment of infections, prevention and control of SARS-COV-2 on unequal populations.
2021.0097
Principal investigator
Center of Data and Knowledge Integration for Health, Brazil

Centro de Matemática da Universidade do Porto, Portugal

Fundação Oswaldo Cruz, Brazil
Bill and Melinda Gates Foundation US

Minderoo Foundation
Ongoing

Other

Designation Funders
2020/08/01 - 2021/08/31 Cohort of 100 Million Brazilians: Social determination and impact of public policies on the occurrence of infectious diseases
213589/Z/18/Z
Researcher
Center of Data and Knowledge Integration for Health, Brazil

Fundação Oswaldo Cruz, Brazil
Brazilian Ministry of Health
Concluded
2020/01/01 - 2020/01/01 The Impact of Primary Health Care on Tuberculosis Incidence, Cure Rate and Mortality: an Integrated Retrospective and Forecasting Study Based on a Cohort of 100 Million Brazilians
VPGDI-003-FIO-44519
Researcher
Centro de Integração de Dados e Conhecimentos para Saúde, Brazil

Centro de Pesquisas Gonçalo Moniz, Brazil

Fundação Oswaldo Cruz, Brazil

Instituto de Salud Global Barcelona, Spain
Bill and Melinda Gates Foundation US

Brazilian Ministry of Health
Ongoing
Outputs

Publications

Journal article
  1. Pereira, Felipe A.C.; Filho, Fábio M.H.S.; de Azevedo, Arthur R.; de Oliveira, Guilherme L.; Flores-Ortiz, Renzo; Valencia, Luis Iván O.; Rodrigues, Moreno M. S.; et al. "Profile of COVID-19 in Brazil: Risk Factors and Socioeconomic Vulnerability Associated with Disease Outcome". SSRN Electronic Journal (2022): http://dx.doi.org/10.2139/ssrn.4081979.
    10.2139/ssrn.4081979
  2. Juliane F. Oliveira; Daniel C. P. Jorge; Rafael V. Veiga; Moreno S. Rodrigues; Matheus F. Torquato; Nivea B. da Silva; Rosemeire L. Fiaccone; et al. Corresponding author: Juliane F. Oliveira. "Mathematical modeling of COVID-19 in 14.8 million individuals in Bahia, Brazil". Nature Communications (2021): https://doi.org/10.1038/s41467-020-19798-3.
    10.1038/s41467-020-19798-3
  3. Guilherme L. de Oliveira; Juliane F. Oliveira; Júlia M. Pescarini; Roberto F. S. Andrade; Joilda S. Nery; Maria Y. Ichihara; Liam Smeeth; et al. Corresponding author: Juliane F. Oliveira. "Estimating underreporting of leprosy in Brazil using a Bayesian approach". PLOS Neglected Tropical Diseases 15 8 (2021): e0009700-e0009700. https://doi.org/10.1371/journal.pntd.0009700.
    10.1371/journal.pntd.0009700
  4. Pataro, Igor M. L.; Oliveira, Juliane F.; Morato, Marcelo M.; Amad, Alan A. S.; Ramos, Pablo I. P.; Pereira, Felipe A. C.; Silva, Mateus S.; et al. Corresponding author: Oliveira, Juliane F.. "A control framework to optimize public health policies in the course of the COVID-19 pandemic". Scientific Reports 11 1 (2021): http://dx.doi.org/10.1038/s41598-021-92636-8.
    10.1038/s41598-021-92636-8
  5. Jorge, Daniel C.P.; Rodrigues, Moreno S.; Silva, Mateus S.; Cardim, Luciana L.; da Silva, Nívea B.; Silveira, Ismael H.; Silva, Vivian A.F.; et al. Corresponding author: Oliveira, Juliane F.. "Assessing the nationwide impact of COVID-19 mitigation policies on the transmission rate of SARS-CoV-2 in Brazil". Epidemics 35 (2021): 100465. http://dx.doi.org/10.1016/j.epidem.2021.100465.
    10.1016/j.epidem.2021.100465
  6. Ximenes, Ricardo Arraes de Alencar; Albuquerque, Maria de Fatima Pessoa Militão de; Martelli, Celina Maria Turchi; Araújo, Thália Velho Barreto de; Miranda Filho, Demócrito de Barros; Souza, Wayner Vieira de; Ichihara, Maria Yury Travassos; et al. "Covid-19 no nordeste do Brasil: entre o lockdown e o relaxamento das medidas de distanciamento social". Ciência & Saúde Coletiva 26 4 (2021): 1441-1456. http://dx.doi.org/10.1590/1413-81232021264.39422020.
    10.1590/1413-81232021264.39422020
  7. Veiga, Rafael V.; Schuler-Faccini, Lavinia; França, Giovanny V. A.; Andrade, Roberto F. S.; Teixeira, Maria Glória; Costa, Larissa C.; Paixão, Enny S.; et al. Corresponding author: Veiga, Rafael V.. "Classification algorithm for congenital Zika Syndrome: characterizations, diagnosis and validation". Scientific Reports 11 1 (2021): http://dx.doi.org/10.1038/s41598-021-86361-5.
    10.1038/s41598-021-86361-5
  8. Miranda, José Garcia Vivas; Silva, Mateus Souza; Bertolino, José Gabriel; Vasconcelos, Rodrigo Nogueira; Cambui, Elaine Cristina Barbosa; Araújo, Marcio Luis Valença; Saba, Hugo; et al. Corresponding author: Miranda, José Garcia Vivas. "Scaling effect in COVID-19 spreading: The role of heterogeneity in a hybrid ODE-network model with restrictions on the inter-cities flow". Physica D: Nonlinear Phenomena 415 (2021): 132792. http://dx.doi.org/10.1016/j.physd.2020.132792.
    10.1016/j.physd.2020.132792
  9. Larissa Catharina Costa; Rafael Valente Veiga; Juliane Fonseca Oliveira; Moreno S. Rodrigues; Roberto F. S. Andrade; Enny S. Paixão; Maria Glória Teixeira; et al. "New Insights on the Zika Virus Arrival in the Americas and Spatiotemporal Reconstruction of the Epidemic Dynamics in Brazil". Viruses 13 1 (2020): 12-12. https://doi.org/10.3390/v13010012.
    10.3390/v13010012
  10. N. Costa, Maria Conceição; Cardim, Luciana Lobato; Teixeira, Maria Gloria; Barreto, Mauricio L.; Carvalho-Sauer, Rita de Cassia Oliveira de; Barreto, Florisneide R.; Carvalho, Martha Suely Itaparica; et al. "Case Fatality Rate Related to Microcephaly Congenital Zika Syndrome and Associated Factors: A Nationwide Retrospective Study in Brazil †". Viruses 12 11 (2020): 1228. http://dx.doi.org/10.3390/v12111228.
    10.3390/v12111228
  11. Ligia Kerr; Carl Kendall; Antônio Augusto Moura da Silva; Estela Maria L Aquino; Julia M Pescarini; Rosa Lívia Freitas de Almeida; Maria Yury Ichihara; et al. "COVID-19 no Nordeste brasileiro: sucessos e limitações nas respostas dos governos dos estados". Ciência & Saúde Coletiva 25 suppl 2 (2020): 4099-4120. https://doi.org/10.1590/1413-812320202510.2.28642020.
    10.1590/1413-812320202510.2.28642020
  12. Oliveira, Juliane F.; Rodrigues, Moreno S.; Skalinski, Lacita M.; Santos, Aline E. S.; Costa, Larissa C.; Cardim, Luciana L.; Paixão, Enny S.; et al. Corresponding author: Oliveira, Juliane F.. "Interdependence between confirmed and discarded cases of dengue, chikungunya and Zika viruses in Brazil: A multivariate time-series analysis". PLOS ONE 15 2 (2020): e0228347. http://dx.doi.org/10.1371/journal.pone.0228347.
    10.1371/journal.pone.0228347
  13. de Oliveira, Juliane Fonseca; Pescarini, Julia Moreira; Rodrigues, Moreno de Souza; Almeida, Bethania de Araujo; Pessanha Henriques, Claudio Maierovitch; Gouveia, Fabio Castro; Rabello, Elaine Teixeira; et al. Corresponding author: de Oliveira, Juliane Fonseca. "The global scientific research response to the public health emergency of Zika virus infection". Plos One (2020): https://publons.com/publon/33946059/.
    10.1371/JOURNAL.PONE.0229790
  14. M. Gabriela M. Gomes; Juliane F. Oliveira; Adelmo Bertolde; Diepreye Ayabina; Tuan Anh Nguyen; Ethel L. Maciel; Raquel Duarte; et al. "Introducing risk inequality metrics in tuberculosis policy development". Nature Communications (2019): https://doi.org/10.1038/s41467-019-10447-y.
    10.1038/s41467-019-10447-y
  15. Paixão, Enny S.; Rodrigues, Moreno S.; Cardim, Luciana L.; Oliveira, Juliane F.; L. C., Catharina; Costa, Maria da Conceição N.; Barreto, Maurício L.; et al. "Impact evaluation of Zika epidemic on congenital anomalies registration in Brazil: An interrupted time series analysis". PLOS Neglected Tropical Diseases 13 9 (2019): e0007721. http://dx.doi.org/10.1371/journal.pntd.0007721.
    10.1371/journal.pntd.0007721
  16. Castro, S.B.S.D.; Labouriau, I.S.; Oliveira, J.F.. "Projections of patterns and mode interactions". Dynamical Systems 33 4 (2018): 547-564. http://www.scopus.com/inward/record.url?eid=2-s2.0-85036644686&partnerID=MN8TOARS.
    10.1080/14689367.2017.1401590
  17. Oliveira, J.F.; Castro, S.B.S.D.; Labouriau, I.S.. "Hexagonal projected symmetries". Acta Crystallographica Section A: Foundations and Advances 71 (2015): 549-558. http://www.scopus.com/inward/record.url?eid=2-s2.0-84940667834&partnerID=MN8TOARS.
    10.1107/S2053273315012905
Online resource
  1. Brazilian COVID-19 data streaming. 2022. https://doi.org/10.48550/arXiv.2205.05032.
  2. Impact of the COVID19-related economic crisis and mitigation effects of social protection on HIV/AIDS and Tuberculosis: an integrated economic, mathematical and epidemiological modelling study. 2022. https://www.researchsquare.com/article/rs-1316131/v1.
  3. Daniel C. P. Jorge; Juliane F. Oliveira; Jose G. V. Miranda; Roberto F. S. Andrade; Suani T. R. Pinho. Corresponding author: Daniel C. P. Jorge. Estimating the effective reproduction number for heterogeneous models using incidence data. 2021. https://arxiv.org/abs/2102.12637.
Thesis / Dissertation
  1. Juliane Fonseca de Oliveira. "Bifurcation of Projected Patterns". PhD, 2017. https://repositorio-aberto.up.pt/handle/10216/90850.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2019/10/29 Disease risk inequalities in mathematical models for infectious disease transmission Link: https://www.youtube.com/watch?v=5Bgj8FS_4NQ&t=135s Café Científico (Scientific divulgation event)
Cidacs/Fiocruz Bahia (Salvador, Brazil)
2018/11 Mathematical modelling of epidemics: the challenge of using big data in the dissemination of Zika, Dengue and Chikungunya viruses Big Data Science Bahia 2018. Link http://www.bigdatascienceba2018.ufba.br/
Federal University of Bahia and Centro de Integração de Dados e Conhecimentos para Saúde (Salvador, Brazil)
2017/10/16 Projections of Patterns and Mode Interactions Symmetry 2017 - The First International Conference on Symmetry
MDPI journal Symmetry (Barcelona, Spain)
2016 Bifurcation of Projected Patterns Post-Graduate Seminar Group, ICMC, University of São Paulo - São Carlos
University of São Paulo - São Carlos (São Paulo, Brazil)
2016 Bifurcation of Projected Patterns Dynamical Systems Seminar
University of Porto (Porto, Portugal)
2016 Dimensionality of Pattern Formation in Reaction Diffusion Systems Dynamical Systems Seminar
Department of Mathematics, University of Porto (Porto, Portugal)
2015 Dimensionality of Pattern Formation in Reaction Diffusion Systems Research Seminar Program (UC-UP Math PhD program)
Department of Mathematics, University of Coimbra (Coimbra, Portugal)
2015 Hexagonal projected Symmetries Algebra and Combinatorics Seminar
Universidade de Coimbra (Coimbra, Portugal)
2014 Hexagonal projected Symmetries Dynamical Systems Seminar
Department of Mathematics, University of Porto (Porto, Portugal)
2012 Spatial Hidden Symmetries in Pattern Formation Seminar of the Mathematics PhD Program of UP-UC
Department of Mathematics, University of Porto (Porto, Portugal)

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2015 - 2015 Intentional Meeting of the American, European and Portuguese Mathematical Societies. University of Porto, Portugal, 2015 (2016/06 - 2016/06)
Meeting (Member of the Organising Committee)

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2022/01/21 - 2022/01/22 Invited Speaker
Workshop
 COVID-19: Looking ahead
University of Hyderabad, India
2021/11/16 - 2021/11/17 Invited Speaker
Round table
 Ki GC Annual Meeting: Data Visualizations and Scientific Communications
Health Data Research UK, United Kingdom
2016 - 2016 Seminar: Dimensionality of Pattern Formation in Reaction Diffusion Systems Workshop dynamics in Networks with special properties
Mathematical Bioscience Institute, Ohio State University, The USA, United States
2015 - 2015 Intentional Meeting of the American, European and Portuguese Mathematical Societies. University of Porto, Portugal, 2015
Conference
 Intentional Meeting of the American, European and Portuguese Mathematical Societies. University of Porto, Portugal, 2015
Universidade do Porto Faculdade de Ciências, Portugal
2015 - 2015 Presentation of research: Hexagonal projected Symmetries
Workshop
 Workshop on topics in applied dynamical systems: equivariance and beyond
Mathematical Bioscience Institute, Ohio State University, The USA, United States
2010 - 2010 Presentation of research work: Smooth Structures on Projective Spaces and Grassmann Manifolds
Meeting
 I Encontro Baiano de Pesquisa em Matemática
Universidade estadual de Santa Cruz, Departamento de Matemática, Brazil
2010 - 2010 Presentation of research: Lie Theory and the Topology of Homogeneous Spaces
Conference
 XI Seminário de Pesquisa e Pós- Graduação
Universidade Federal da Bahia, Brazil
2009 - 2009 Presentation of research: Smooth structures on the Real Projective Space
Conference
 XXVII Seminário Estudantil de Pesquisa, X Seminário de Pesquisa e Pós-Graduação
Universidade Federal da Bahia, Brazil
2009 - 2009 Presentation of research: Applications in Winplot for Medium Education
Meeting
 XII Encontro de Matemática da Universidade Federal da Bahia
Universidade Federal da Bahia - Campus Ondina, Brazil
2008 - 2008 Exhibition of Mathematical Objects for Teaching - LEMA/UFBA
Symposium
 I International Symposium on Mathematics Teaching
Universidade Federal da Bahia - Campus Ondina, Brazil

Ad Hoc journal article review

Journal title (ISSN) Publisher
2021/05 - Current Epidemics (1755-4365) Elsevier
2021/04 - Current F1000Research ( 2046-1402) F1000Research
2020/08 - Current Wellcome open research (2398-502X) Wellcome Open Research
2020 - Current PLOS Computational Biology (1553-7358) PLOS

Association member

Society Organization name Role
2011/09/12 - Current Centro de Matemática da Universidade do Porto

Legal proceeding

Activity description Case
2018 - 2018 Oliveira, J.F.D., 2018. Projections of Periodic Functions and Mode Interactions. Multidisciplinary Digital Publishing Institute Proceedings, 2(1), p.88.
Distinctions

Award

2018 Postdoctoral Researcher Fellowship
Brazilian Ministry of Health, Brazil
2018 Researcher fellowship
Instituto Gulbenkian de Ciência, Portugal
2017 Symmetry 2017 Conference Award
MDPI journal Symmetry, Spain
2017 Postdoctoral Researcher fellowship
Fundação para a Ciência e a Tecnologia, Portugal
2012 PhD fellowship
Brazilian National Council for Scientific and Technological Development, Brazil
2009 Institutional Scholarship Program of Scientific Initiation fellowship
Brazilian National Council for Scientific and Technological Development, Brazil
2009 Institutional Scholarship Program of Teaching Initiation fellowship
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Brazil
2008 Graduated scholarship
Center of Afro-Oriental Studies, Brazil

Universidade Federal da Bahia - Campus Ondina, Brazil
2006 Honorable Mention and Bronze Medal in the Brazilian Mathematical Olympiad
Instituto Nacional de Matemática Pura e Aplicada, Brazil

Sociedade Brasileira de Matemática, Brazil