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I hold a masters' degree in Pharmaceutical Biotechnology by the Faculty of Pharmacy of the University de Coimbra (awarded in 2019/07) and bachelors' degree in Biochemistry by the Faculty of Sciences and Technology of the same university (awarded in 2018/03). I will also start to attend the PhD in Biomedicine at the Universitat Pompeu Fabra (beginning in October this year). Currently, I am a contracted researcher in Anaxomics Biotech S.L., under a Horizon-2020/Marie Sklodowska-Curie grant (agreement No 765912). I've been able to publish two articles in journals and three sections of books; organized two events and participated in other four. I am a participating researcher in one international project. My areas of interest are Gene-based Diagnostics and Therapeutic Interventions, Bioinformatics and Health-Related Biotechnology in coordination with my base-training in Biochemistry. Within my professional activity, I've interacted with 30 collaborators via co-authorship of scientific papers. Most frequent Keywords: Machine Learning; Pharmacogenomics; Small Molecules; Biologics; Biosimilars; Clinical Medicine; Oncology; Cancer; Biochemistry; Pharmacology; Data-science; Artificial Intelligence; Oncology; Genomics; Bioinformatics.
Identification

Personal identification

Full name
PEDRO MATOS PINTO SANTOS FILIPE
Date of birth
1996/04/25

Citation names

  • Matos-Filipe, Pedro

Author identifiers

Ciência ID
FA13-144F-4980
ORCID iD
0000-0003-0492-0683
Google Scholar ID
tHuuZJgAAAAJ

Email addresses

  • pedro.filipe@anaxomics.com (Professional)

Websites

Knowledge fields

  • Medical and Health Sciences - Medical Biotechnology - Gene-based Diagnostics and Therapeutic Interventions
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Medical and Health Sciences - Medical Biotechnology - Health-Related Biotechnology
  • Natural sciences - Biological Sciences - Biochemistry

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Proficiency (C2) Advanced (C1) Advanced (C1) Advanced (C1)
Spanish; Castilian Upper intermediate (B2) Advanced (C1) Intermediate (B1) Upper intermediate (B2) Intermediate (B1)
Education
Degree Classification
2020/06 - 2023/06
Ongoing
Doctorat en Biomedicina (Doctorat)
Universitat Pompeu Fabra, Spain
2017/10 - 2019/07
Concluded
Pharmaceutical Biotechnology (Mestrado)
Major in Sem especialização
Universidade de Coimbra Faculdade de Farmácia, Portugal
"A Computational Method to Predict the Combinatory Effect of Drugs in Cancer" (THESIS/DISSERTATION)
17
2014/09/11 - 2018/03/18
Concluded
Biochemistry (Licenciatura)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
"Prediction of Secondary Structure of Proteins - an empirical approach to the process" (THESIS/DISSERTATION)
13
Affiliation

Science

Category
Host institution
Employer
2020/02/03 - Current Contracted Researcher (Research) Anaxomics, Spain
Anaxomics, Spain
(...)
2019/11/15 - 2020/01/31 Contracted Researcher (Research) Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal
Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal
2017/09/17 - 2019/09/29 Research Trainee (Research) Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal
CNC.IBILI, Portugal
(...)
Projects

Contract

Designation Funders
2020/02/03 - Current ProEVLifeCycle - The prostate cancer Extracellular Vesicle Network
Researcher
Anaxomics, Spain
EU Framework Programme for Research and Innovation Marie Sklodowska-Curie Actions
Ongoing
Outputs

Publications

Book chapter
  1. Barreto, Carlos A.V.; Baptista, Salete J.; Preto, António José; Matos-Filipe, Pedro; Mourão, Joana; Melo, Rita; Moreira, Irina. "Prediction and targeting of GPCR oligomer interfaces". In Oligomerization in Health and Disease: From Enzymes to G Protein-Coupled Receptors, 105-149. Elsevier, 2020.
    10.1016/bs.pmbts.2019.11.007
  2. Preto, A.J.; Matos-Filipe, Pedro; Almeida, José G.; Mourão, Joana; Moreira, I.S.. "Predicting Hot-Spots using a Deep Neural Network Approach". In Artificial Neural Networks, edited by Cartwright, H.. Springer, 2020.
    In press
  3. Preto, António J.; Matos-Filipe, Pedro; Koukos, Panagiotis I.; Renault, Pedro; Sousa, Sérgio F.; Moreira, Irina S.. "Structural Characterization of Membrane Protein Dimers". In Protein Supersecondary Structures, edited by Alexander E. Kister, 403-436. Humana Press, 2019.
    Published • 10.1007/978-1-4939-9161-7_21
Conference abstract
  1. Matos-Filipe, Pedro; Preto, A.J.; Almeida, José G.; Koukos, Panagiotis; Bonvin, Alexandre; Moreira, I.S.. "MENSAdb: A Major Structural Statistical Analysis of Membrane Protein Dimers". Paper presented in 6th Meeting of Young Researchers in Structural Computational Biology, Porto, 2018.
  2. Filipe, Pedro; Preto, António; Koukos, Panos; Bonvin, Alexandre; Moreira, Irina. "Alpha-helical and beta-sheet membrane- membrane protein dimers: centralizing information". Paper presented in Proceedings of the MOL2NET 2017, International Conference on Multidisciplinary Sciences, Coimbra, 2017.
    Accepted • 10.3390/mol2net-03-05107
Journal article
  1. Matos-Filipe, Pedro; António J. Preto; Panagiotis I. Koukos; Joana Mourão; Alexandre M.J.J. Bonvin; Irina S. Moreira. "MENSADB: A Thorough Structural Analysis of Membrane Protein Dimers". Biomolecules (q-bio.BM) (2019): arXiv:1902.02321.
    Open access • Published
  2. Melo, Rita; Lemos, Agostinho; Preto, António J.; Bueschell, Beatriz; Matos-Filipe, Pedro; Barreto, Carlos; Almeida, José G.; et al. "An overview of antiretroviral agents for treating HIV infection in paediatric population". Current Medicinal Chemistry 25 (2018): http://dx.doi.org/10.2174/0929867325666180904123549.
    10.2174/0929867325666180904123549
Thesis / Dissertation
  1. Matos-Filipe, Pedro. "A Computational Method to Predict the Combinatory Effect of Drugs in Cancer". 2019.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2018/12 An in-silico Predictor of Protein Dimer Interfaces 6th Meeting of Young Researchers in Structural Computational Biology
(Porto, Portugal)

Event organisation

Event name
Type of event (Role)
Institution / Organization
2017/06/01 - 2017/12/22 Meeting of Young Structural Computational Biology Researchers (2017/12/22 - 2017/12/22)
Meeting (Member of the Organising Committee)
Universidade de Coimbra, Portugal
2015/06 - 2016/06 IX Biochemistry Students' National Meeting (2016/04/18 - 2016/04/21)
Meeting (Member of the Organising Committee)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal

Event participation

Activity description
Type of event
Event name
Institution / Organization
2018/12/21 - 2018/12/21 Participação em "Meeting of Young Structural Computational Biology Researchers".
Meeting
Meeting of Young Structural Computational Biology Researchers
Universidade do Porto, Portugal
2018/09/27 - 2018/09/28 Symposium under the motto "Translational Science: From Academia to Industry", where members of academia and industry shared their perspectives on the socioeconomic and corporate facades of drugs R&D.
Symposium
1st Drugs R&D PhD Symposium
Universidade de Coimbra Faculdade de Farmácia, Portugal
2016/02/19 - 2016/02/19 Participação em palestras e workshop de Propriedade Intelectual da III Reunião Nacional de Bioquímicos.
Meeting
III Reunião Nacional de Bioquímicos
Associação Nacional de Bioquímicos, Portugal

Universidade de Coimbra, Portugal
2016/02/19 - 2016/02/19 Intellectual Property Workshop
Workshop
Intellectual Property Workshop
Associação Nacional de Bioquímicos, Portugal

Association member

Society Organization name Role
2019/03/17 - Current Associação Nacional de Bioquímicos (National Association of Biochemists) Member
2017/12 - 2018/12 Associação Académica de Coimbra (Coimbra Students' Union) Chairman of the board of the General Assembly
2017/01 - 2017/12 Associação Académica de Coimbra (Coimbra Students' Union) General coordinator for Educational Policies
2016/01 - 2017/01 Associação Académica de Coimbra (Coimbra Students' Union) General coordinator for Social Support
2015/06 - 2016/01 Núcleo de Estudantes de Bioquímica da Associação Académica de Coimbra (Biochemistry Commission of the Coimbra Students' Union) Secretary of the board of the General Assembly