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Tony Collins, principal researcher at the CBMA, Univ. of Minho. I am a protein scientist/enzymologist, principally focused on deciphering the molecular determinants of protein/enzyme structure, function & stability, while also developing proteins for application. I have expertise in all areas of the protein bioprospection process, from the screening of environmental samples for proteins of interest, to the production, purification, characterisation, engineering & application of proteins. I have a PhD in Biochemistry from the Univ. of Liege, Belgium, & completed a post-doctoral study at the same University before pursuing an EMBO long term fellowship at the ITQB, Univ. of Lisbon, Portugal. These studies were focused on investigating how cold-adapted enzymes from polar & marine environments have adapted to function efficiently in their low temperature environments. Using comparative biochemistry & biophysics approaches in conjunction with protein engineering & protein structure studies, we obtained a greater understanding of enzyme cold-adaptation strategies, thereby facilitating improved successes in the tailoring of enzymes to process conditions. Specifically, we showed the important role of enzyme flexibility & the balancing of activity, stability & flexibility in enzymes adapted to different thermal environments. In addition, during these studies, we identified a novel xylanase with novel characteristics & functions, thereby permitting a new understanding of these glycoside hydrolases & a reappraisal of their diversity & classification. Importantly also, these fundamental studies were successfully translated into 5 patents & a worldwide marketed product: a cold-adapted enzyme for use in the baking industry. At the CBMA, I am involved in research, teaching, training & management activities. I initially worked with protein-based-polymers, focused on the production, purification & characterisation of these, & enabled for the development & optimisation of pilot & industrial scale production & purification processes with 150-fold higher protein yields than previously reported & a simplified purification process. More recently, my expertise in protein science has been harnessed for studies with a yeast chitinase, which has been successfully heterologously produced in a eukayotic host, purified, characterised, & shown to have potential in vaccine applications against yeast infections, with patent submission pending. Presently, I am leading research on the development of a biorefinery system for the enzyme-based transformation of macroalgae to novel value-added bioactive products, & am prospecting the marine environment for novel enzymes with potential for use in this. I am also developing novel, low cost, high-throughput site-directed mutagenesis approaches to enhance the protein engineering toolbox & enable a more streamlined tailoring of enzymes. Outputs: 63 publications with currently 8090 citations. Principal inventor of 5 international patents & 1 internationally commercialised biotechnological product. Funding received for 13 research projects, 4 as the principal investigator, as well as public & private funding for participation as research scientist in 2 scientific expeditions to Antarctica. Reviewer for numerous international peer reviewed journals & project reviewer & coordinator for both national & international funding agencies. 62 poster presentations & 33 oral presentations, including invited & keynote presentations, both nationally & internationally. Author & contributor to numerous local & national newspapers & radio opinion pieces, interviews and exhibitions. Supervised 37 post-doc, PhD & BSc projects. Jury member for 33 PhD, MSc & BSc projects nationally & internationally. Coordinator & lecturer in the MSc. in Molecular Genetics & MSc. in Applied Biochemistry. 2 times member of the Scientific Council, & member of the coordinating committee for researcher evaluation at the School of Sciences, Univ. of Minho.
Identification

Personal identification

Full name
James Anthony Collins

Citation names

  • Tony Collins

Author identifiers

Ciência ID
E01F-D5D8-3438
ORCID iD
0000-0002-4167-973X
Google Scholar ID
https://scholar.google.pt/citations?user=JIAMor4AAAAJ&hl=en

Email addresses

  • tcollins@bio.uminho.pt (Professional)

Telephones

Telephone
  • 253601519 (Professional)

Addresses

  • Centre of Molecular and Environmental Biology (CBMA). Department of Biology, University of Minho, 4710-057, Braga, Braga, Portugal (Professional)

Websites

Knowledge fields

  • Engineering and Technology - Industrial Biotechnology
  • Natural sciences - Biological Sciences - Biochemistry
  • Engineering and Technology - Industrial Biotechnology - Biocatalysis
  • Natural sciences - Biological Sciences - Molecular Biology
  • Engineering and Technology - Other Engineering and Technologies - Food and Beverages
  • Engineering and Technology - Industrial Biotechnology - Bioprocessing Technologies
  • Natural sciences - Biological Sciences - Marine Biology

Languages

Language Speaking Reading Writing Listening Peer-review
English (Mother tongue)
Portuguese Upper intermediate (B2) Advanced (C1) Elementary (A2) Upper intermediate (B2)
French Elementary (A2) Upper intermediate (B2) Beginner (A1) Intermediate (B1)
Education
Degree Classification
2005/02/17
Concluded
PhD in Biochemistry (Doctor of Philosophy)
Université de Liège, Belgium
"A novel family 8 psychrophilic xylanase: fundamentals and applications" (THESIS/DISSERTATION)
Distinction with Highest Honors
1998
Concluded
MSc in Biotechnology (Master)
De Montfort University, United Kingdom
"Isolation and expression of alkaliphilic protease genes." (THESIS/DISSERTATION)
B+
1994
Concluded
BSc (Hons) in Biological Sciences (Bachelor)
University of Wolverhampton, United Kingdom
"n/a" (THESIS/DISSERTATION)
2i
Affiliation

Science

Category
Host institution
Employer
2015/02/09 - Current Principal Investigator (Research) Universidade do Minho, Portugal
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2014/10/09 - 2015/02/08 Invited Auxiliary Researcher (Research) Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2009/10/01 - 2014/09/30 Auxiliary Researcher (Research) Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2007/05/01 - 2009/09/30 Postdoc (Research) European Molecular Biology Organization (EMBO), Germany
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2005/02/09 - 2007/04/30 Postdoc (Research) Université de Liège, Belgium
1998/06/01 - 1998/09/30 Research Trainee (Research) Genencor International BV, Netherlands
1995/10/01 - 1997/08/31 Contracted Researcher (Research) Stiefel Laboratories UK Ltd, United Kingdom
1995/02/01 - 1995/06/30 Research Trainee (Research) Cadbury UK Ltd., United Kingdom
Cadbury UK Ltd., United Kingdom
Projects

Grant

Designation Funders
2007/05/13 - 2009/05/12 Psychrophiles and psychrophilic enzymes for the study of compatible solutes and their mechanism of action: the role of protein dynamics.
ALTF 950-2006
Principal investigator
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
European Molecular Biology Organisation (EMBO)
Concluded

Contract

Designation Funders
2022/11/01 - 2025/12/31 Development of new biorefinery models for the advanced processing of algal biomass in ingredients. The Blue Economy Pact (PBA), Vertical Algas, Sub-Project 2.
C644915664-00000026
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Agência para a Competitividade e Inovação IP
Ongoing
2020/10/01 - 2023/09/30 ATLANTIDA - Platform for the monitoring of the North Atlantic ocean and tools for the sustainable exploitation of the marine resources.
NORTE-01-0145-FEDER-000040
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
Comissao de Coordenacao e Desenvolvimento Regional do Norte

European Regional Development Fund
Concluded
2021/04/01 - 2023/06/30 River2Ocean - Socio-ecological and biotechnological solutions for the conservation and valorisation of aquatic biodiversity in the Minho Region.
NORTE-01-0145-FEDER-000068
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Comissao de Coordenacao e Desenvolvimento Regional do Norte

European Regional Development Fund
Concluded
2019/04/10 - 2023/04/09 Sourdough biotechnology network towards novel, healthier and sustainable food and bioprocesses (Sourdomics)
CA18101
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
European Cooperation in Science and Technology
Concluded
2016/06/01 - 2020/05/31 EcoAgriFood: Innovative Green Products and Processes to Promote Agri-Food Bioeconomy.
NORTE-01-0145-FEDER-000009
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Comissao de Coordenacao e Desenvolvimento Regional do Norte
Concluded
2016/10/01 - 2020/03/31 FunBioPlas: Novel synthetic biocomposites for biomedical devices.
ERA-IB-2-6/0004/2014
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2013/07/01 - 2016/06/30 NMR Net - National Facility for Nuclear Magnetic Resonance: from Molecular Structure and Dynamics to Protein Function, Cell Physiology, and Metabolomics
RECI/BBB-BQB/0230/2012
Researcher
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal

Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2014/04/07 - 2015/10/06 Unravelling the determinants of xylanase function and stability and enhancing the biotechnological value of a highly active Antarctic xylanase (EngXyl)
EXPL/BBB-BIO/1772/2013,
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/06/01 - 2014/05/31 ECOplast: Research in new biomass-based composites from renewable resources with improved properties for vehicle parts moulding.
FP7-NMP-2009-SME-3 (collaborative project number 246176)
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
European Commission
Concluded
2011/01/01 - 2013/12/31 Projecto Estratégico - UI 4050 - 2011-2012
PEst-C/BIA/UI4050/2011
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2005/05/13 - 2007/05/12 Cold-adapted cross-linking enzymes in the food and feed industries
EPH3310300R0202
Principal investigator
Universite de Liege Département des Sciences de la Vie, Belgium
Direction Generale des Technologies de la Recherche et de l’Energie (DGTRE)
Concluded
2003/05/12 - 2005/05/11 Development of a xylanase for use in the food industry
R0202/215266 - PINDXYL
Principal investigator
Universite de Liege Département des Sciences de la Vie, Belgium
Direction Generale des Technologies de la Recherche et de l’Energie (DGTRE)
Concluded

Other

Designation Funders
2021/01/01 - 2025/12/31 Aquatic Research Infrastructure Network
LA/P/0069/2020
Researcher
Universidade do Minho, Portugal

Universidade do Algarve, Portugal

Instituto Politécnico de Leiria, Portugal

Instituto Universitário de Ciências Psicológicas Sociais e da Vida, Portugal

FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Universidade de Lisboa Faculdade de Ciências, Portugal

Universidade de Coimbra, Portugal

Universidade de Évora, Portugal

Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação, Portugal

Centro de Ciências do Mar e do Ambiente, Portugal

Universidade NOVA de Lisboa, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
Outputs

Publications

Book chapter
  1. Diogo Silva; Gustavo Santos; Mário Barroca; Diogo Costa; Tony Collins. "Inverse PCR for site-directed mutagenesis". In PCR: Methods and Protocols. Methods in Molecular Biology., edited by Domingues, Lucília, 223-238. Springer Science+, 2023.
    Published • 10.1007/978-1-0716-3358-8_18
  2. Silva, Diogo; Santos, Gustavo; Barroca, Mário; Collins, Tony. "Inverse PCR for point mutation introduction". In Methods in Molecular Biology: PCR: Methods and Protocols,, edited by Domingues, Lucília, 87-100. Springer New York, 2017.
    Published • 10.1007/978-1-4939-7060-5_5
  3. Barroca, Mário; Santos, Gustavo; Gerday, Charles; Collins, Tony. "Biotechnological aspects of cold-active enzymes". In Psychrophiles: From Biodiversity to Biotechnology, edited by Margesin, Rosa, 461-475. Springer International Publishing, 2017.
    Published • 10.1007/978-3-319-57057-0_19
  4. Collins, Tony; Gerday, Charles. "Enzyme catalysis in psychrophiles". In Psychrophiles: From Biodiversity to Biotechnology, edited by Margesin, Rosa, 209-235. Springer International Publishing, 2017.
    Published • 10.1007/978-3-319-57057-0_10
  5. Collins, Tony; Gerday, Charles. "Psychrophiles: from biodiversity to biotechnology". edited by Rosa Margesin. Springer International Publishing, 2017.
    Published • 10.1007/978-3-319-57057-0
  6. Marx, Jean Claude; D'Amico, Salvino; Collins, Tony; Feller, Georges. "Cold-adapted enzymes: fundamentals and biotechnological aspects". In Applied Biotechnology, edited by Meshram, S. U.; Shinde, G.B., 183-188. I K International Publishing House, 2009.
    Published
  7. Collins, Tony; Roulling, Frédéric; Piette, Florence; Marx, Jean-Claude; Feller, Georges; Gerday, Charles; D'Amico, Salvino. "Fundamentals of cold-adapted enzymes". In Psychrophiles: from Biodiversity to Biotechnology, edited by Margesin, Rosa; Schinner, Franz; Marx, Jean Claude; Gerday, Charles, 211-227. Springer Berlin Heidelberg, 2008.
    Published • 10.1007/978-3-540-74335-4_13
  8. Collins, Tony; D'Amico, Salvino; Marx, Jean-Claude; Feller, Georges; Gerday, Charles. "Cold-adapted enzymes". In Physiology and Biochemistry of Extremophiles, edited by Gerday, Charles; Glansdorff, Nicolas, 165-179. American Society of Microbiology, 2007.
    Published • 10.1128/9781555815813.ch13
  9. D'amico, Salvino; Georlette, Daphné; Collins, Tony; Feller, Georges; Gerday, Charles. "Microcalorimetry as applied to psychrophilic enzymes". In Biocalorimetry 2: Application of Calorimetry in the Biological Sciences, edited by Ladbury, J.E., 231-240. John Wiley & Sons, Ltd, 2005.
    Published • 10.1002/0470011122.ch13
  10. Collins, Tony; Claverie, Paule; D'Amico, Salvino; Georlette, Daphné; Gratia, Emmanuelle; Hoyoux, Anne; Meuwis, Marie-Alice; et al. "Life in the cold: psychrophilic enzymes". In Recent Research Developments in Proteins, edited by Pandalai, S.G., 13-26. Transworld Research Network, Trivandrum, 2002.
    Published
  11. D'Amico, Salvino; Claverie, Paule; Collins, Tony; Feller, Georges; Georlette, Daphné; Gratia, Emmanuelle; Hoyoux, Anne; et al. "Cold-adapted enzymes: an unachieved symphony". In Cell and Molecular Responses To Stress. Protein Adaptations and Signal Transduction, edited by Storey K.B; Storey J.M., 31-42. Elsevier, 2001.
    Published • 10.1016/s1568-1254(01)80005-x
  12. Georlette, D.; Bentahir, M.; Claverie, P.; Collins, T.; D’amico, S.; Delille, D.; Feller, G.; et al. "Cold-adapted enzymes". In Physics and Chemistry Basis of Biotechnology, edited by Bulte J.; Decuyper M., 177-196. Kluwer Academic Publishers B.V., 2001.
    Published • 10.1007/0-306-46891-3_7
Conference paper
  1. Collins, Tony; Barroca, Mário; Branca, Fernando; Azevedo Silva, Joao; da Costa, André; Machado, Raul; Casal, Margarida. "Optimising a cell factory system for the bioproduction of silk-elastin-like polymers.". Paper presented in 1st International Conference on Natural Fibres (ICNF2013): Sustainable Materials for Advanced Applications, Guimarães, 2013.
  2. Collins, Tony; Hoyoux, Anne; Van Petegem, Filip; De Vos, Dirk; Van Beeumen, Jozef; Stals, Ingeborg; Nerinckx, Wim; et al. "A novel family 8 psychrophilic xylanase: fundamentals and applications". Paper presented in International Symposium on Extremophiles and their Applications, Tokyo, 2005.
    Published • 10.11490/isea.2005.0.73.0
  3. Gerday, Charles; D'Amico, Salvino; Collins, Tony; Marx, Jean-Claude; Feller, Georges; Sonan, Guillaume. "Adaptation strategies and use of cold-adapted enzymes in biotechnological processes". Paper presented in International Symposium on Extremophiles and their Applications, Tokyo, 2005.
    Published • 10.11490/isea.2005.0.66.0
  4. Gerday, Charles; Marx, Jean-Claude; Collins, Tony; D'Amico, Salvino; Feller, Georges. "Fundamental and biotechnological aspects of cold-adapted enzymes.". Paper presented in 229th National Meeting of the American-Chemical-Society, 2005.
Conference poster
  1. Margarida Costa; Diana Rodrigues; Luis Melo; Joana Azeredo; Collins, Tony. "Bacteriophage endolysins as novel specific antimicrobials.". Paper presented in II CBMA Open Day, 2025.
  2. Bragança A.R.; Marques Silva A.R.; Gomes J.; Collins, Tony; Casal, Margarida; Soares Silva I.; Machado R.. "Unlocking the biotechnological potential of marine microorganisms: the River2Ocean project's contribution to the blue bioeconomy". Paper presented in Microbiotec’23: Congress of Microbiology and Biotechnology 2023, Covilhã, Portugal, 2023.
  3. Bragança A.R.; Gomes J.; Marques Silva A.R.; Collins, Tony; Casal, Margarida; Soares Silva I.; Machado R. "The River2Ocean project: isolation, genotyping and phenotyping of marine microorganisms as key drivers for sustainable innovation.". Paper presented in IV International Meeting of the Portuguese Society of Genetics (IMPSG IV), 2023.
  4. Costa, D. F.; Mendonça, Da Cruz M.; Collins, Tony. "A novel approach for site-directed mutagenesis: process optimisation.". Paper presented in IV International Meeting of the Portuguese Society of Genetics (IMPSG IV), 2023.
  5. Costa D. F.; Collins, Tony. "Extraction of xylan from Palmaria palmata.". Paper presented in IV Chemical & Biological Engineering Doctoral Symposium - Innovation in Chemical and Biological Engineering., 2023.
  6. Bragança A.R.; Marques Silva A.R.; Gomes J.; Collins, Tony; Casal, Margarida; Soares Silva I.; Machado, Raul. "Marine microbial resources: paving the way for a blue bioeconomy.". Paper presented in 15th International Conference on Culture Collections (ICCC15)., 2023.
  7. Bragança A.R.; Marques Silva A.R.; Collins, Tony; Casal, Margarida; Soares Silva I.; Machado, Raul. "Establishment of a biobank of marine microorganisms with biotechnological potential.". Paper presented in International Conference on Biotechnology for a Circular Bioeconomy. European Federation of Biotechnology (EFB) and Asian Federation of Biotechnology (AFOB), 2023.
  8. Costa, Diogo Felix; Mendonça ,Da Cruz Mauro; Collins, Tony. "A novel method for single and multi-site-directed mutagenesis.". Paper presented in Chemical & Biological Engineering Doctoral Symposium - Biotechnology to Shape the Future, 2022.
  9. Costa-Barbosa, Augusto; Pacheco M I; Ferreira D.J.S.; Correia A.; Collins, Tony; Sampaio, Paula. "Candida albicans chitinase Cht3: a novel vaccine antigen against fungal systemic infections.". Paper presented in III Chemical & Biological Engineering Doctoral Symposium - Biotechnology to Shape the Future., 2022.
  10. Miranda-Cadena, Katherine; Dias, Maresol; Costa-Barbosa, Augusto; Collins, Tony; Marcos-Ariasa, C.; Erasoa, E.; Quidósa, G.; Sampaio, Paula. "Antifungal activities of carvacrol, cinnamaldehyde, citral and thymol liposomes against Candida.". Paper presented in 9th Trends in Medical Mycology Congress (TIMM), Nice, France., 2019.
  11. Barbosa, Augusto; Dias, Marisol; Real Oliveira, M. Elisabete C.D.; Pais, Célia; Collins, Tony; Sampaio, Paula. "Characterisation and liposomal encapsulation of recombinant Candida albicans Cht3 - a novel subunit antigen against fungal infections.". Paper presented in IV Symposium PDBMA, 2018.
  12. Barbosa, Augusto; Dias, Maresol; Real Oliveira, M. Elisabete C.D.; Collins, Tony; Sampaio, Paula. "Candida albicans Cht3 as a novel recombinant subunit antigen against fungal infections: characterisation and liposomal encapsulation.". Paper presented in XXI Jornadas de Biologia de Leveduras Prof NVU, Braga, Portugal, 2018.
  13. Silva, Paulo C.; Domingues, Lucília; Collins, Tony; Oliveira, Rui; Johansson, Björn. "Quantitative assessment of DNA damage in the industrial ethanol production strain Saccharomyces cerevisiae PE-2.". Paper presented in XXI Jornadas de Biologia de Leveduras Prof NVU, Braga, Portugal, 2018.
  14. Barroca, Mário; Pacheco, Margarida; Oliveira, Bruno; Velosa, Paulo; Santos, Gustavo; Collins, Tony. "Deciphering the role of exposed surface residues in protein stability.". Paper presented in XLI Jornadas Portuguesas de Genética, Aveiro, Portugal, 2017.
  15. Pacheco, Margarida; Barroca, Mário; Oliveira, Bruno; Velosa, Paulo; Santos, Gustavo; Collins, Tony. "Investigating the role of exposed surface residues in protein stability.". Paper presented in Applied Biochemistry Symposium, Braga, Portugal, 2017.
    10.1109/eitc.2005.1544341
  16. Barroca, Mário; Olíveira, Bruno; Pacheco, Margarida; Santos, Gustavo; Velosa, Paulo; Silva, Diogo; Collins, Tony. "Enhancement of the biotechnological value of a commercial cold-adapted xylanase.". Paper presented in 2nd Joint BIOTECnico - AEM Workshop, Lisbon, Portugal, 2017.
  17. Barroca, Mário; Rodrigues, Paulo; Pacheco, Margarida; Branca, Fernando; Casal, Margarida; Collins, Tony. "High-level biosynthesis of a silk-elastin-like protein in E. coli: fed batch production and antibiotic free selection.". Paper presented in XIX National Congress of Biochemistry, Guimarães, Portugal, 2016.
  18. Barroca, Mário; Santos, Gustavo; Oliveira, Bruno; Pacheco, Margarida; Velosa, Paulo; Silva, Diogo; Collins, Tony. "Protein engineering for low pH stability: the role of exposed surface residues.". Paper presented in XIX National Congress of Biochemistry, Guimarães, Portugal, 2016.
  19. Costa-Barbosa, Augusto; Sampaio, Paula; Collins, Tony. "Heterologous production and purification of Candida albicans Cht3 and Sap2: novel recombinant subunit antigens.". Paper presented in XIX National Congress of Biochemistry, Guimarães, Portugal, 2016.
  20. Pereira, Ana Margarida; Machado, Raul; Bernardo, Telma; da Costa, André; Ribeiro, Artur; Collins, Tony; Gomes, Andreia Castro; et al. "Silk-based biomaterials with improved cell adhesion properties". Paper presented in XIX Congresso Nacional de Bioquímica SPB2016, 2016.
  21. Velosa, Paulo; Esteki, Leila; Azevedo, F.; Collins, Tony; Johansson, Björn. "Expression of a cold adapted xylanase in Saccharomyces cerevisiae for xylan metabolisation.". Paper presented in XL Jornadas Portuguesas de Genética, Coimbra, Portugal., 2016.
  22. Barroca, Mário; Santos, Gustavo; Olíveira, Bruno; Velosa, Paulo; Silva, Diogo; Johansson, Björn; Collins, Tony. "Engineering a commercial cold-adapted xylanase for improved acid pH stability.". Paper presented in XL Jornadas Portuguesas de Genética, Coimbra, Portugal, 2016.
  23. Costa-Barbosa, Augusto; Sampaio, Paula; Collins, Tony. "Production and purification of Candida albicans Cht3 and Sap2 in E. coli: novel recombinant subunit antigens.". Paper presented in Jornadas Portuguesas de Genética, Coimbra, Portugal, 2016.
  24. Pereira, Ana Margarida Macedo Bernardes; Machado, Raul; Costa, André Manuel Abreu; Ribeiro, Artur J.; Collins, Tony; Gomes, Andreia Castro; Leonor, I. B.; et al. "Genetically engineered silk-based composite biomaterials functionalized with fibronectin type-II that promote cell adhesion". Paper presented in XL Jornadas Portuguesas de Genética, Coimbra, Portugal., 2016.
  25. Barroca, Mário; Rodrigues, Paulo; Branca, Fernando; Casal, Margarida; Collins, Tony. "Reducing Acetate Accumulation and Plasmid Instability for Enhanced Recombinant Protein Production in E. coli". Paper presented in III Symposium PDBMA, Braga, Portugal, 2015.
  26. Barroca, Mário; Santos, Gustavo; Silva, Diogo; Johansson, Björn; Collins, Tony. "Investigating the Role of Surface Exposed Residues in the Acidic pH Instability of a Commercial Xylanase.". Paper presented in III Symposium PDBMA, Braga, Portugal, 2015.
  27. Pereira, Ana Margarida; Machado, Raul; Bernardo, Telma; da Costa, André; Ribeiro, A.; Collins, Tony; Gomes, Andreia C.; et al. "Silk-based polymers functionalized with fibronectin type-II for improved cell adhesion.". Paper presented in III Symposium PDBMA, Braga, Portugal, 2015.
  28. Esteki, Leila; Collins, Tony; Johansson, Björn. "Towards functional screening for xylo-oligomer transporters.". Paper presented in 33rd Small Meeting on Yeast Transport and Energetics (SMYTE), Lisbon, Portugal, 2015.
  29. Barroca, Mário; Esteki, Leila; Santos, Gustavo; Silva, Diogo; Johansson, Björn; Collins, Tony. "Enhancing stability and activity of a family 8 xylanase at acidic pH.". Paper presented in XXXIX Jornadas Portuguesas de Genética, Braga, Portugal, 2015.
  30. Esteki, Leila; Collins, Tony; Johansson, Björn. "Developing a recombinant Saccharomyces cerevisiae strain for growth on xylan.". Paper presented in XXXIX Jornadas Portuguesas de Genética, Braga, 2015.
  31. Pereira, Ana Margarida; Machado, Raul; Bernardo, Telma; da Costa, André; Ribeiro, Arthur; Collins, Tony; Gomes, Andreia C.; et al. "Silk-based polymers functionalized with fibronectin type-II for improved cell adhesion.". Paper presented in XXXIX Jornadas Portuguesas de Genética, Braga, Portugal, 2015.
  32. Campos, A. R.; Oliveira, B.; Machado, Raul; Collins, Tony; Azevedo-Silva, João; da Costa, André; Immonen, K.; Wikstrom, L.; Casal, Margarida. "Nanocellulose composites using a recombinant protein based polymer as matrix.". Paper presented in International Conference on Natural Fibers (ICNF2015), Sao Miguel, Azores, Portugal,, 2015.
  33. Barroca, Mário; Esteki, Leila; Santos, Gustavo; Silva, Diogo; Johansson, Björn; Collins, Tony. "Engineering a commercial cold-adapted xylanase for enhanced biotechnological value.". Paper presented in XVIII Congress of the Portuguese Biochemical Society (SPB), Coimbra, Portugal, 2014.
  34. Barroca, Mário; Rodrigues, Paulo; Branca, Fernando; Casal, Margarida; Collins, Tony. "High-level biosynthesis of a silk-elastin-like protein in E. coli: reducing acetate accumulation and plasmid instability.". Paper presented in XVIII Congress of the Portuguese Biochemical Society (SPB), Coimbra, Portugal, 2014.
  35. Barroca, Mário; Esteki, Leila; Santos, Gustavo; Silva, Diogo; Johansson, Björn; Collins, Tony. "Engineering a commercial cold-adapted xylanase for enhanced biotechnological value.". Paper presented in II Jornadas PDMA, Braga, Portugal, 2014.
  36. Barroca, Mário; Rodrigues, Paulo; Branca, Fernando; Casal, Margarida; Collins, Tony. "High-level biosynthesis of a silk-elastin-like protein in E. coli: reducing acetate accumulation and plasmid instability.". Paper presented in II Jornadas PDMA, 2014.
  37. Silva, A. M.; da Costa, André; Chitas, R.; Collins, Tony; Gomes, Andreia C.; Rodríguez-Cabello, Jose Carlos; Lanceros-Mendez, Senentxu; et al. "Fabrication of SELP/Ag nanocomposite materials with antimicrobial properties by electrospinning and solvent casting.". Paper presented in International Conference on Antimicrobial Research (ICAR2014), Madrid, Spain, 2014.
  38. Barroca, Mário; Rodrigues, Paulo; Branca, Fernando; Machado, Raul; Collins, Tony. "High level biosynthesis of a silk-elastin-like protein in E. coli.". Paper presented in XV Jornadas de Biologia Aplicada, Braga, Portugal, 2014.
  39. Barroca, Mário; Rodrigues, Paulo; Branca, Fernando; Collins, Tony; Casal, Margarida. "Optimisation of the fed-batch production of a silk-elastin-like protein: overcoming acetate accumulation and plasmid instability.". Paper presented in I Jornadas PDMA 2013, 2013.
  40. Pereira, Ana Margarida; Bernardo, Telma C.; da Costa, André; Collins, Tony; Machado, Raul; Leonor, Isabel B.; Casal, Margarida; Reis, Rui L.. "Development of new chimeric proteins for tissue engineering.". Paper presented in Term Stem 2013, Porto, Portugal, 2013.
  41. Pereira, Ana Margarida; Bernardo, Telma C.; da Costa, André; Collins, Tony; Machado, Raul; Leonor, Isabel B.; Casal, Margarida; Reis, Rui L.. "Development of new chimeric proteins for tissue engineering.". Paper presented in Polaris 1st Workshop, Porto, Portugal, 2013.
  42. Machado, Raul; da Costa, André; Sencadas, Vitor; Silva, J. A.; Collins, Tony; Arias, Francisco Javier; Lanceros-Mendez, Senentxu; Rodríguez-Cabello, Jose Carlos; Casal, Margarida. "Synthesis and processing of recombinant silk and elastin copolymers.". Paper presented in 1st International Conference on Natural Fibers (ICNF2013), Guimarães, Portugal, 2013.
  43. Campos, A. R.; Oliveira, B.; Machado, Raul; Collins, Tony; Silva, J. A.; da Costa, André; Immonen, K.; Wikstrom, L.; Casal, Margarida. "Novel nanocellulose reinforced recombinant protein based polymer composites.". Paper presented in 1st International Conference on Natural Fibers (ICNF2013), Guimarães, Portugal, 2013.
  44. Collins, Tony; Azevedo Silva, Joao; da Costa, André; Branca, Fernando; Machado, Raul; Casal, Margarida. "Key stress factors and parameters for production optimisation of silk-elastin-like proteins in E. coli BL21(DE3).". Paper presented in Recombinant Protein Production 7 (RPP7), European Federation of Biotechnology. Laupheim, Ulm, Germany, 2013.
  45. Collins, Tony; Azevedo Silva, Joao; da Costa, André; Branca, Fernando; Machado, Raul; Casal, Margarida. "Key stress factors and parameters for batch production optimisation of silk-elastin-like proteins in E. coli.". Paper presented in Microbiotec II, Braga, Portugal, 2011.
  46. Collins, Tony; Matzapetakis, Manolis; Pais, Tiago; Lamosa, Pedro; Santos, Helena. "NMR Solution structure of a cold-adapted thiol-disulfide oxidoreductase.". Paper presented in Microbiotec II, Braga, Portugal, 2011.
  47. Collins, Tony; Matzapetakis, Manolis; Pais, Tiago; Lamosa, Pedro; Santos, Helena. "NMR solution structure of a cold-adapted thiol-disulfide oxidoreductase.". Paper presented in 8th International Congress on Extremophiles, Ponta Delgada, São Miguel, Acores, Portugal, 2010.
  48. Collins, Tony. "NMR solution structure determination of a psychrophilic thiol-disulfide oxidoreductase.". Paper presented in 1st Iberian NMR Meeting, Seville, Spain, 2008.
  49. Collins, Tony; Matzapetakis, Manolis; Pais, Tiago; Lamosa, Pedro; Santos, Helena. "NMR solution structure determination of a psychrophilic thiol-disulfide oxidoreductase.". Paper presented in Portuguese-Spanish-British Joint Biophysics Congress 2008, Parque das Nações, Lisbon, Portugal, 2008.
  50. Pipers, Delphine; Berlemont, Renaud; Power, P.; Collins, Tony; Feller, Georges; Moreno, Galleni. "Isolation of novel hydrolytic genes from an Antarctic metagenomic library.". Paper presented in 3rd International Conference on Polar and Alpine Microbiology, Banff, Canada, 2008.
  51. Collins, Tony; Hoyoux, Anne; Gerday, Charles; Van Petegem, Filip; Van Beeumen, Jozef; Georis, Jacques; Dauvrin Thierry; Feller, Georges. "A novel family 8 psychrophilic xylanase: fundamentals and applications.". Paper presented in Belgian Society of Biochemistry and Molecular Biology Young Scientist Day, Gembloux, Belgium, 2006.
  52. Collins, Tony; Hoyoux, Anne; Dauvrin, Thierry; Gerday, Charles; Feller, Georges. "Cold-adapted xylanases: from Antarctica to the table.". Paper presented in International Conference on Alpine and Polar Microbiology, Innsbruck, Austria, 2006.
  53. D'Amico, Salvino; Collins, Tony; Georlette, Daphne; Marx, Jean-Claude; Gerday, Charles; Feller, Georges. "Activity, stability relationships in extremophilic enzymes.". Paper presented in Joint European and National Astronomy Meeting, Liege, Belgium, 2005.
  54. Georis, Jacques; Arnaut, Filip; Collins, Tony; Dauvrin, Thierry; Meyer, K.; Dutron, Agnès; Feller, Georges; Genot, Bernard; Hoyoux, Anne. "A psychrophilic family 8 xylanase acts as a novel efficient improver of bakery products.". Paper presented in American Association of Cereal Chemists/TIA Joint Meeting 2014, San Diego, USA, 2004.
  55. Collins, Tony; Hoyoux, Anne; Georis, Jacques; Dauvrin, Thierry; Gerday, Charles; Feller, Georges. "A novel family 8 psychrophilic xylanase: fundamentals and applications.". Paper presented in 5th International Congress on Extremophiles 2004, Baltimore, USA, 2004.
  56. D'Amico, Salvino; Collins, Tony; Georlette, Daphné; Marx, Jean-Claude; Gerday, Charles; Feller, Georges. "Activity, stability relationships in extremophilic enzymes.". Paper presented in 5th International Congress on Extremophiles 2004, Baltimore, USA, 2004.
  57. D'Amico, Salvino; Collins, Tony; Georlette, Daphné; Feller, Georges; Gerday, Charles. "Structural adaptations of psychrophilic enzymes.". Paper presented in 5th International Congress on Extremophiles 2004, Baltimore, USA, 2004.
  58. D'Amico, Salvino; Collins, Tony; Georlette, Daphné; Marx, Jean Claude; Gerday, Charles; Feller, Georges. "Activity, stability relationships in extremophilic enzymes.". Paper presented in Conference on Understanding Protein Stability, Stockholm, Sweden, 2004.
  59. Collins, Tony; Meuwis, Marie Alice; Feller, Georges; Gerday, Charles. "A novel family 8 xylanase: characteristics and evolutionary aspects.". Paper presented in Bioforum, Liege, Belgium, 2001.
  60. Meuwis, Marie-Alice; Collins, Tony; Feller, Georges; Gerday, Charles. "Study of thermostabilized mutants of the psychrophilic Pseudoalteromonas haloplanktis xylanase.". Paper presented in Bioforum, Liege, Belgium, 2001.
  61. Collins, Tony; Fux, Frederic; Garsoux, Geneviève; Meuwis, Marie-Alice; Gerday, Charles. "Molecular adaptations to cold: cold adapted bacterial xylanases.". Paper presented in Bioforum 2000, Liege, Belgium, 2000.
  62. Collins, Tony; Gerday, Charles. "Lake vostok: molecular adaptations to cold.". Paper presented in Lake Vostok WorkShop, Cambridge, U.K., 1999.
Journal article
  1. Costa-Barbosa, Augusto; Pacheco MI; Gomes A.C.; Collins, Tony; Vilanova M.; Pais C.; Correia A.; Sampaio P.. "Pre-clinical evaluation of a divalent liposomal vaccine to control human disseminated candidiasis.". Cell Host & Microbe (2025):
    Submitted
  2. Coelho, Diogo; Costa, Diogo Felix; Barroca, Mário; Helena Abreu; Margarida Martins; Collins, Tony. "Simplified, high yielding extraction of xylan/xylo-oligosaccharides from Palmaria palmata.". Algal Research (2025):
    Submitted
  3. Augusto Costa-Barbosa; Diogo Ferreira; Maria Inês Pacheco; Margarida Casal; Henrique Oliveira Duarte; Catarina Gomes; Ana Margarida Barbosa; et al. "Candida albicans chitinase 3 with potential as a vaccine antigen: production, purification, and characterisation". Biotechnology Journal 19 e2300219 (2024): 1-14. https://doi.org/10.1002/biot.202300219.
    Published • 10.1002/biot.202300219
  4. Costa-Barbosa, Augusto; Pacheco, Maria Inês; Carneiro, Catarina; Botelho, Cláudia; Gomes, Andreia C.; Real Oliveira, M. Elisabete C.D.; Collins, Tony; et al. "Design of a lipid nano-delivery system containing recombinant Candida albicans chitinase 3 as a potential vaccine against fungal infections". Biomedicine & Pharmacotherapy 166 115362 (2023): 1-12. http://dx.doi.org/10.1016/j.biopha.2023.115362.
    Published • 10.1016/j.biopha.2023.115362
  5. Mauro Mendonça; Mário Barroca; Tony Collins. "Endo-1,4-ß-xylanase-containing glycoside hydrolase families: characteristics, singularities and similarities". Biotechnology Advances 65 108148 (2023): 1-23. http://dx.doi.org/10.1016/j.biotechadv.2023.108148.
    Published • 10.1016/j.biotechadv.2023.108148
  6. Tony Collins; Georges Feller. "Psychrophilic enzymes: strategies for cold-adaptation". Essays in Biochemistry 67 4 (2023): 701-713. http://dx.doi.org/10.1042/ebc20220193.
    Published • 10.1042/ebc20220193
  7. Miranda-Cadena, Katherine; Dias, Marisol; Costa-Barbosa, Augusto; Collins, Tony; Marcos-Arias, Cristina; Eraso, Elena; Pais, Célia; Quindós, Guillermo; Sampaio, Paula. "Development and characterization of monoolein-based liposomes of carvacrol, cinnamaldehyde, citral, or thymol with anti-Candida activities". Antimicrobial Agents and Chemotherapy 65 4 (2021): http://dx.doi.org/10.1128/aac.01628-20.
    Published • 10.1128/aac.01628-20
  8. Tony Collins; Rosa Margesin. "Psychrophilic lifestyles: mechanisms of adaptation and biotechnological tools". Applied Microbiology and Biotechnology 103 7 (2019): 2857-2871. https://doi.org/10.1007/s00253-019-09659-5.
    Published • 10.1007/s00253-019-09659-5
  9. Margesin, Rosa; Collins, Tony. "Microbial ecology of the cryosphere (glacial and permafrost habitats): current knowledge". Applied Microbiology and Biotechnology 103 6 (2019): 2537-2549. http://dx.doi.org/10.1007/s00253-019-09631-3.
    Published • 10.1007/s00253-019-09631-3
  10. Monteiro, Bruno; Ferraz, Pedro; Barroca, Mário; da Cruz, Sandra H.; Collins, Tony; Lucas, Cândida. "Conditions promoting effective very high gravity sugarcane juice fermentation". Biotechnology for Biofuels 11 1 (2018): http://dx.doi.org/10.1186/s13068-018-1239-0.
    Published • 10.1186/s13068-018-1239-0
  11. Silva, Paulo César; Domingues, Lucília; Collins, Tony; Oliveira, Rui; Johansson, Björn. "Quantitative assessment of DNA damage in the industrial ethanol production strain Saccharomyces cerevisiae PE-2". FEMS Yeast Research 18 8 (2018): http://dx.doi.org/10.1093/femsyr/foy101.
    Published • 10.1093/femsyr/foy101
  12. Pereira, Ana Margarida; Machado, Raul; da Costa, André; Ribeiro, Artur; Collins, Tony; Gomes, Andreia C.; Leonor, Isabel B.; et al. "Silk-based biomaterials functionalized with fibronectin type II promotes cell adhesion". Acta Biomaterialia 47 (2017): 50-59. http://dx.doi.org/10.1016/j.actbio.2016.10.002.
    Published • 10.1016/j.actbio.2016.10.002
  13. Barroca, Mário; Santos, Gustavo; Johansson, Björn; Gillotin, Florian; Feller, Georges; Collins, Tony. "Deciphering the factors defining the pH-dependence of a commercial glycoside hydrolase family 8 enzyme". Enzyme and Microbial Technology 96 (2017): 163-169. http://dx.doi.org/10.1016/j.enzmictec.2016.10.011.
    Published • 10.1016/j.enzmictec.2016.10.011
  14. Barroca, Mário; Rodrigues, Paulo; Sobral, Rómulo; Costa, M. Manuela R.; Chaves, Susana R.; Machado, Raul; Casal, Margarida; Collins, Tony. "Antibiotic free selection for the high level biosynthesis of a silk-elastin-like protein". Scientific Reports 6 1 (2016): http://dx.doi.org/10.1038/srep39329.
    Published • 10.1038/srep39329
  15. Roulling, Frédéric; Godin, Amandine; Cipolla, Alexandre; Collins, Tony; Miyazaki, Kentaro; Feller, Georges. "Activity-stability relationships revisited in blue oxidases catalyzing electron transfer at extreme temperatures". Extremophiles 20 5 (2016): 621-629. http://dx.doi.org/10.1007/s00792-016-0851-9.
    Published • 10.1007/s00792-016-0851-9
  16. Machado, Raul; da Costa, André; Sencadas, Vitor; Pereira, Ana Margarida; Collins, Tony; Rodríguez-Cabello, José Carlos; Lanceros-Méndez, Senentxu; Casal, Margarida. "Exploring the properties of genetically engineered silk-elastin-like protein films". Macromolecular Bioscience 15 12 (2015): 1698-1709. http://dx.doi.org/10.1002/mabi.201500132.
    Published • 10.1002/mabi.201500132
  17. da Costa, André; Machado, Raul; Ribeiro, Artur; Collins, Tony; Thiagarajan, Viruthachalam; Neves-Petersen, Maria Teresa; Rodríguez-Cabello, José Carlos; Gomes, Andreia C.; Casal, Margarida. "Development of elastin-like recombinamer films with antimicrobial activity". Biomacromolecules 16 2 (2015): 625-635. http://dx.doi.org/10.1021/bm5016706.
    Published • 10.1021/bm5016706
  18. Carneiro, Catarina; Correia, Alexandra; Collins, Tony; Vilanova, Manuel; Pais, Célia; Gomes, Andreia C.; Real Oliveira, M. Elisabete C.D.; Sampaio, Paula. "DODAB:monoolein liposomes containing Candida albicans cell wall surface proteins: A novel adjuvant and delivery system". European Journal of Pharmaceutics and Biopharmaceutics 89 (2015): 190-200. http://dx.doi.org/10.1016/j.ejpb.2014.11.028.
    Published • 10.1016/j.ejpb.2014.11.028
  19. Collins, Tony; Barroca, Mário; Branca, Fernando; Padrão, Jorge; Machado, Raul; Casal, Margarida. "High level biosynthesis of a silk-elastin-like protein in E. coli". Biomacromolecules 15 7 (2014): 2701-2708. http://dx.doi.org/10.1021/bm5005564.
    Published • 10.1021/bm5005564
  20. Pereira, Ana Margarida; Bernardo, Telma C.; da Costa, André; Collins, Tony; Machado, Raul; Leonor, Isabel B.; Casal, Margarida; Reis, Rui L.. "Development of new chimeric proteins for tissue engineering". Journal of Tissue Engineering and Regenerative Medicine 7 1 (2013): 46-52. http://dx.doi.org/10.1002/term.1822.
    Published • 10.1002/term.1822
  21. Machado, Raul; Azevedo-Silva, João; Correia, Cristina; Collins, Tony; Arias, Francisco Javier; Rodríguez-Cabello, Jose Carlos; Casal, Margarida. "High level expression and facile purification of recombinant silk-elastin-like polymers in auto induction shake flask cultures". AMB Express 3 1 (2013): 11. http://dx.doi.org/10.1186/2191-0855-3-11.
    Published • 10.1186/2191-0855-3-11
  22. Collins, Tony; Azevedo-Silva, João; da Costa, André; Branca, Fernando; Machado, Raul; Casal, Margarida. "Batch production of a silk-elastin-like protein in E. coli BL21(DE3): key parameters for optimisation". Microbial Cell Factories 12 1 (2013): 21. http://dx.doi.org/10.1186/1475-2859-12-21.
    Published • 10.1186/1475-2859-12-21
  23. Collins, Tony; Matzapetakis, Manolis; Santos, Helena. "Backbone and side chain 1H, 15N and 13C assignments for a thiol-disulphide oxidoreductase from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125". Biomolecular NMR Assignments 4 2 (2010): 151-154. http://dx.doi.org/10.1007/s12104-010-9230-0.
    Published • 10.1007/s12104-010-9230-0
  24. Marx, Jean Claude; D'Amico, Salvino; Collins, Tony; Feller, Georges. "Cold-Adapted enzymes: fundamentals and biotechnological aspects". Applied Biotechnology (2009): 183-183. https://books.google.pt/books?id=CqYup0-7dGUC.
    Published
  25. Marx, J-C.; Collins, T.; D’Amico, S.; Feller, G.; Gerday, C.. "Cold-adapted enzymes from marine Antarctic microorganisms". Marine Biotechnology 9 3 (2006): 293-304. http://dx.doi.org/10.1007/s10126-006-6103-8.
    Published • 10.1007/s10126-006-6103-8
  26. Collins, Tony; D’Amico, Salvino; Georlette, Daphné; Marx, Jean Claude; Huston, Adrienne L.; Feller, Georges. "A nondetergent sulfobetaine prevents protein aggregation in microcalorimetric studies". Analytical Biochemistry 352 2 (2006): 299-301. http://dx.doi.org/10.1016/j.ab.2006.01.035.
    Published • 10.1016/j.ab.2006.01.035
  27. De Vos, D.; Collins, T.; Nerinckx, W.; Savvides, S. N.; Claeyssens, M.; Gerday, C.; Feller, G.; Van Beeumen, J.. "Oligosaccharide binding in family 8 glycosidases:  crystal structures of active-site mutants of the ß-1,4-xylanase pXyl from Pseudoaltermonas haloplanktis TAH3a in complex with substrate and product.". Biochemistry 45 15 (2006): 4797-4807. http://dx.doi.org/10.1021/bi052193e.
    Published • 10.1021/bi052193e
  28. D'Amico, Salvino; Collins, Tony; Marx, Jean-Claude; Feller, Georges; Gerday, Charles. "Psychrophilic microorganisms: challenges for life". EMBO reports 7 4 (2006): 385-389. http://dx.doi.org/10.1038/sj.embor.7400662.
    Published • 10.1038/sj.embor.7400662
  29. Collins, Tony; Hoyoux, Anne; Dutron, Agnès; Georis, Jacques; Genot, Bernard; Dauvrin, Thierry; Arnaut, Filip; Gerday, Charles; Feller, Georges. "Use of glycoside hydrolase family 8 xylanases in baking". Journal of Cereal Science 43 1 (2006): 79-84. http://dx.doi.org/10.1016/j.jcs.2005.08.002.
    Published • 10.1016/j.jcs.2005.08.002
  30. Collins, T.; De Vos, D.; Hoyoux, A.; Savvides, S.N.; Gerday, C.; Van Beeumen, J.; Feller, G.. "Study of the active site residues of a glycoside hydrolase family 8 xylanase". Journal of Molecular Biology 354 2 (2005): 425-435. http://dx.doi.org/10.1016/j.jmb.2005.09.064.
    Published • 10.1016/j.jmb.2005.09.064
  31. Collins, Tony; Gerday, Charles; Feller, Georges. "Xylanases, xylanase families and extremophilic xylanases". FEMS Microbiology Reviews 29 1 (2005): 3-23. http://dx.doi.org/10.1016/j.femsre.2004.06.005.
    Published • 10.1016/j.femsre.2004.06.005
  32. Marx, Jean-Claude; Blaise, Vinciane; Collins, Tony; D'Amico, Salvino; Delille, Daniel; Gratia, Emmanuelle; Hoyoux, Anne; et al. "A perspective on cold enzymes: current knowledge and frequently asked questions.". Cellular and molecular biology 50 (2004): 643-655.
    Published • 10.1170/T554
  33. Georlette, D.; Blaise, V.; Collins, T.; D'Amico, S.; Gratia, E.; Hoyoux, A.; Marx, J.-C.; et al. "Some like it cold: biocatalysis at low temperatures". FEMS Microbiology Reviews 28 1 (2004): 25-42. http://dx.doi.org/10.1016/j.femsre.2003.07.003.
    Published • 10.1016/j.femsre.2003.07.003
  34. Anne Hoyoux; Vinciane Blaise; Tony Collins; Salvino D'Amico; Emmanelle Gratia; Adrienne Louise Huston; Jean-Claude Marx; et al. "Extreme catalysts from low-temperature environments". Journal of Bioscience and Bioengineering 98 5 (2004): 317-330. https://doi.org/10.1016%2Fs1389-1723%2804%2900290-7.
    Published • 10.1016/s1389-1723(04)00290-7
  35. Collins, Tony; Meuwis, Marie-Alice; Gerday, Charles; Feller, Georges. "Activity, stability and flexibility in glycosidases adapted to extreme thermal environments". Journal of Molecular Biology 328 2 (2003): 419-428. http://dx.doi.org/10.1016/s0022-2836(03)00287-0.
    Published • 10.1016/s0022-2836(03)00287-0
  36. Van Petegem, Filip; Collins, Tony; Meuwis, Marie-Alice; Gerday, Charles; Feller, Georges; Van Beeumen, Jozef. "The structure of a cold-adapted family 8 xylanase at 1.3 Å resolution: structural adaptations to cold and investigation of the active site.". Journal of Biological Chemistry 278 9 (2002): 7531-7539. http://dx.doi.org/10.1074/jbc.m206862200.
    Published • 10.1074/jbc.m206862200
  37. Van Petegem, Filip; Collins, Tony; Meuwis, Marie-Alice; Gerday, Charles; Feller, Georges; Van Beeumen, Jozef. "Crystallization and preliminary X-ray analysis of a xylanase from the psychrophile Pseudoalteromonas haloplanktis". Acta Crystallographica Section D Biological Crystallography 58 9 (2002): 1494-1496. http://dx.doi.org/10.1107/s0907444902011666.
    Published • 10.1107/s0907444902011666
  38. D'Amico, Salvino; Claverie, Paule; Collins, Tony; Georlette, Daphné; Gratia, Emmanuelle; Hoyoux, Anne; Meuwis, Marie-Alice; Feller, Georges; Gerday, Charles. "Molecular basis of cold adaptation". Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences 357 1423 (2002): 917-925. http://dx.doi.org/10.1098/rstb.2002.1105.
    Published • 10.1098/rstb.2002.1105
  39. Collins, Tony; Meuwis, Marie-Alice; Stals, Ingeborg; Claeyssens, Marc; Feller, Georges; Gerday, Charles. "A novel family 8 xylanase, functional and physicochemical characterization". Journal of Biological Chemistry 277 38 (2002): 35133-35139. http://dx.doi.org/10.1074/jbc.m204517200.
    Published • 10.1074/jbc.m204517200
  40. Zecchinon, Laurent; Claverie, Paule; Collins, Tony; D'Amico, Salvino; Delille, Daniel; Feller, Georges; Georlette, Daphne; et al. "Did psychrophilic enzymes really win the challenge?". Extremophiles 5 5 (2001): 313-321. http://dx.doi.org/10.1007/s007920100207.
    Published • 10.1007/s007920100207
  41. Gerday, Charles; Aittaleb, Mohamed; Bentahir, Mostafa; Chessa, Jean-Pierre; Claverie, Paule; Collins, Tony; D'Amico, Salvino; et al. "Cold-adapted enzymes: from fundamentals to biotechnology". Trends in Biotechnology 18 3 (2000): 103-107. http://dx.doi.org/10.1016/s0167-7799(99)01413-4.
    Published • 10.1016/s0167-7799(99)01413-4
Newspaper article
  1. Collins, Tony. "Exploring the Antarctic (Explorando a Antártida)", Diário Do Minho, 2017
  2. Collins, Tony. "Life at the extremes", Nos_Online Journal, 2016
  3. Collins, Tony. "A vida no extremo", Correio do Minho, 2015, https://www.ecum.uminho.pt/pt/Media/Documents/Correio%20do%20Minho/2015/29-05-2015.pdf.
  4. Collins, Tony. "Life at the Extremes (A vida no extremo)", Correio do Minho, 2013, http://www.bio.uminho.pt/uploads/Artigo%20Tony.pdf.
Online resource
  1. De Vos, Dirk; Collins, Tony; Savvides, S.N.; Feller, Georges; Van Beeumen, Jozef. Structure of a cold-adapted family 8 xylanase in complex with substrate (2B4F): D144A-X5. 2006. https://www.wwpdb.org/pdb?id=pdb_00002b4f.
    10.2210/pdb2b4f/pdb
  2. De Vos, Dirk; Collins, Tony; Hoyoux, Anne; Savvides, S. N.; Gerday, Charles; Van Beeumen, Jozef; Feller, Georges. Structure of a cold-adapted family 8 xylanase: E78Q-X3 (1XWQ). 2005. https://www.wwpdb.org/pdb?id=pdb_00001xwq.
    10.2210/pdb1xwq/pdb
  3. Van Petegem, Filip; Collins, Tony; Meuwis, Marie-Alice; Feller, Georges; Gerday, Charles; Van Beeumen, Jozef. Structure of a cold-adapted family 8 xylanase (1H12): WT-xylose (X2). 2003. https://doi.org/10.2210/pdb1h12/pdb.
    10.2210/pdb1H12/pdb
Thesis / Dissertation
  1. Collins, Tony. "A novel family 8 psychrophilic xylanase: fundamentals and applications". PhD, Université de Liège, 2005.
  2. Collins, Tony. "Isolation and expression of alkaliphilic protease genes". Master, Genencor International BV, 1998.

Intellectual property

Patent
  1. Collins, Tony; Barroca, Mário. 2022. "Process for the production of xylan and xylan products from algae products and their uses thereof. Europe".
    Expired
  2. Collins, Tony; Feller, Georges; Gerday, Charles; Meuwis, Marie Alice. 2012. "Family 8 enzymes with xylanolytic activity". United States.
    Granted/Issued
  3. Dutron, Agnès; Georis, Jacques; Genot, Bernard; Dauvrin, Thierry; Collins, Tony; Hoyoux, Anne; Feller, Georges. 2012. "Use of family 8 enzymes with xylanolytic activity in baking". United States.
    Granted/Issued
  4. Georis, Jacques; Dauvrin Thierry; Hoyoux, Anne; Collins, Tony; Feller, Georges. 2008. "Novel xylanases and their use". United States.
  5. Georis, Jacques; Dauvrin, Thierry; Hoyoux, Anne; Collins, Tony; Feller, Georges. 2005. "Novel xylanases and their use, World Intellectual Property Organization, WIPO (PCT)".
    Granted/Issued
  6. Collins, Tony; Dutron, Agnès; Georis, Jacques; Genot, Bernard; Dauvrin, Thierry; Collins, Tony; Hoyoux, Anne; Feller, Georges. 2004. "Use of family 8 enzymes with xylanolytic activity in baking, World Intellectual Property Organization, WIPO (PCT)".
    Granted/Issued

Other

Dataset
  1. Collins, Tony. 1XWT.pdb: Structure of a cold-adapted family 8 xylanase (mutant D281N). https://www.wwpdb.org/pdb?id=pdb_00001xwt.
    10.2210/pdb1xwt/pdb
  2. Collins, Tony. 2A8Z.pdb: Structure of a cold-adapted family 8 xylanase (mutant D144A). https://www.wwpdb.org/pdb?id=pdb_00002a8z.
    10.2210/pdb2a8z/pdb
  3. Collins, Tony. 1H13.pdb: Structure of a cold-adapted family 8 xylanase (wild-type). https://www.wwpdb.org/pdb?id=pdb_00001h13.
    10.2210/pdb1h13/pdb
  4. Collins, Tony. 1H14.pdb: Structure of a cold-adapted family 8 xylanase (mutant D144N). https://www.wwpdb.org/pdb?id=pdb_00001h14.
    10.2210/pdb1h14/pdb
  5. Collins, Tony. 1XW2.pdb: Structure of a cold-adapted family 8 xylanase (mutant E78Q). https://www.wwpdb.org/pdb?id=pdb_00001xw2.
    10.2210/pdb1xw2/pdb
  6. Collins, Tony. BMRB Entry 16689: Backbone and side chain 1H, 15N and 13C assignments for a cold-adapted thiol-disulphide oxidoreductase. http://www.bmrb.wisc.edu/data_library/summary/?bmrbId=16689.
    10.13018/BMR16689
  7. Collins, Tony. Pseudoalteromonas haloplanktis xyl gene for endo-1,4-beta-xylanase, GenBank: AJ427921.1. https://www.ncbi.nlm.nih.gov/nuccore/AJ427921.
Invention
  1. Xylanase enzyme developed for use as a technological aid in baking applications. Currently being commercialised worldwide by Puratos N. V. with sales of over 3 million Euros per year. 2005-ongoing. Commercial bakers. 2005. Collins, Tony.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2025/02/05 Unlocking the potential of Palmaria palmata: sustainable production of xylan and xylooligosaccharides. II CBMA Open Day
University of Minho (Portugal)
2023/10/19 The River2Ocean project: isolation, genotyping and phenotyping of marine microorganisms as key drivers for sustainable innovation. IV International Meeting of the Portuguese Society of Genetics (IMPSG IV).
Portuguese Society of Genetics (Braga, Portugal)
2023/03/09 From extremophiles to protein-based-polymers: fundamental and applied aspects. VIII Jornadas de Bioengenharia
(University of Trás-Os-Montes and Alto Douro, Vila Real, Portugal)
2022/11/25 Bioprospecting the biotechnological potential of marine microorganisms. MicroSummit 2022.
Portuguese Society of Microbiology (SPM) (Porto, Portugal)
2019/10/10 Candida albicans chitinase Cht3: production, purification, characterisation and use as a vaccine antigen. V Symposium PDBMA
Universidade do Minho (Braga, Portugal)
2018/06/19 From extremophiles to protein-based-polymers: fundamental and applied aspects. Invited Key Note Lecture. UI Seminars
University of Iceland (Reykjavik, Iceland)
2018/06/08 Candida albicans Cht3 as a novel recombinant subunit antigen against fungal infections: characterisation and liposomal encapsulation. XXI Jornadas de Biologia de Leveduras
Universidade do Minho (Braga, Portugal)
2018/01/31 From extremophiles to protein-based-polymers: fundamental and applied aspects. Invited Key Note Lecture. XIX Jornadas de Biologia Aplicada
Universidade do Minho (Braga, Portugal)
2017/11/16 From extremophiles to protein-based-polymers: fundamental and applied aspects. Invited Key Note Lecture. ITQB NOVA Scientific Meeting
Universidade Nova de Lisboa, ITQB (Oeiras, Portugal)
2017/09/27 Enhancement of the biotechnological value of a commercial cold-adapted xylanase. 2nd Joint DP_AEM - PDBMA Workshop
Universidade do Minho (Braga, Portugal)
2017/02/16 Enhancement of the biotechnological value of a commercial cold-adapted xylanase. 2nd Joint BIOTECnico - AEM Workshop
Instituto Superior Técnico (IST) (Lisbon, Portugal)
2016/06/03 Overcoming acetate accumulation and plasmid instability in the fed-batch production of proteins. XL Jornadas Portuguesas de Genética
Portuguese Genetics Society (SPG), Universidade de Coimbra (Coimbra, Portugal)
2016/01/19 Cold-adapted enzymes: fundamentals and applications. Invited Lecture. Society for Applied Microbiology (SfAM) Winter Meeting
Society for Applied Microbiology (SfAM) (London, United Kingdom)
2015/12/11 Advanced silk-based genetic polymers with improved cell adhesion properties. MicroBiotec 2015
Portuguese Society of Microbiology and Portuguese Society of Biotechnology (Evora, Portugal)
2015/05/27 High-level biosynthesis of recombinant proteins: E. coli as a cell factory. XXXIX Jornadas Portuguesas de Genética
Portuguese Genetics Society (SPG) (Braga, Portugal)
2015/05/26 Synthetic Protein Biotechnology approaches for the creation of antimicrobial biopolymers. XXXIX Jornadas Portuguesas de Genética
Portuguese Genetics Society (bra, Portugal)
2014/11/27 High-level biosynthesis of a silk-elastin-like protein in E. coli. II Jornadas PDMA
Universidade do Minho (Braga, Portugal)
2014/10/01 Life at the extremes: Enzyme adaptation to low temperature. Invited Key Note Lecture. Beyond the Frozen Challenge (BFC)
Puratos N.V. (Ghent, Belgium)
2013/12/08 Optimising the production of a silk-elastin-like protein in E. coli: overcoming acetate accumulation and plasmid instability. Microbiotec 2013
Portuguese Society of Microbiology and Portuguese Society of Biotechnology (Aveiro, Portugal)
2013/06/09 Optimising a cell factory system for the bioproduction of silk-elastin-like polymers. 1st International Conference on Natural Fibers (ICNF2013)
University of Minho, Fibrenamics International Platform (Guimaraes, Portugal)
2012/10/26 From extremophiles to protein-based-polymers: fundamental and applied aspects. Jornadas do CFUM 2012
Centro de Física, Universidade do Minho (Braga, Portugal)
2010/06/02 Life in the cold: molecular adaptations of cold-adapted enzymes. XXXV Jornadas Portuguesas de Genética
Portuguese Genetics Society (SPG) (Braga, Portugal)
2010/05/25 Life in the cold: molecular adaptations of cold-adapted enzymes. Invited Key Note Lecture. Jornadas de Bioquímica
Universidade do Minho (Braga, Portugal)
2007/01/25 Life in the cold: psychrophilic enzymes. Invited Key Note Lecture. Gordon Research Conference, Temperature Stress in Plants
Gordon Research Conferences (Harbortown, Ventura, C.A., United States)
2006/05/20 Psychrophilic enzymes: molecular-basis of cold-adaptation. Invited Key Note Lecture. Plant and Microbe Adaptations to Cold Meeting (PMAC2006)
(Salsomaggiore Terme, Italy)
2005/11/30 A novel family 8 psychrophilic xylanase: fundamentals and applications. International Symposium on Extremophiles and their Application
International Society for Extremophiles (ISE) (Tokyo, Japan)
2005/04/28 A novel family 8 psychrophilic xylanase: fundamentals and applications. Invited Key Note Lecture. Puratos Group Seminars
Puracor N.V. - Puratos Group (Brussels, Belgium)
2004/09/20 A novel family 8 psychrophilic xylanase: fundamentals and applications. 5th International Congress on Extremophiles 2004
International Society for Extremophiles (ISE) (Baltimore, United States)
2004/09/19 Activity, stability relationships in extremophilic enzymes. 5th International Congress on Extremophiles 2004
International Society for Extremophiles (ISE) (Baltimore, United States)
2004/05/03 A Novel Cold-Adapted Bacterial Xylanase. First Europe Objective 3 Meeting
Heraklion University (Heraklion, Greece)
2001/06/15 Cold adapted xylanases from antarctic microorganisms. International meeting on Enzymes Responsible For The Degradation Of Hemicelluloses.
University of Gent (Gent, Belgium)
2000/05/12 NAD+ and ATP - dependant DNA ligases: an introduction. ColdNet Meeting 2000
University of Crete (Heraklion, Greece)
1999/04/24 Bacterial psychrophilic xylanases: an introduction. ColdNet Meeting 1999
University of Lyon (Lyon, France)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2023/11/13 - 2025/12/31 Development of new biorefinery systems for the advanced processing of algal biomass to ingredients: macroalgae valorisation (Supervision of post-doc research project)
Supervisor
Research Grantee
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2023/10/30 - 2025/02 Characterization of the antifungal activity of CHT3 against skin mycosis fungi: a novel putative antifungal agent.
Co-supervisor
Bioquímica Aplicada (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2024/10 - 2025 Bacteriophage endolysins as new specific antimicrobials.
Supervisor of Margarida Brito Costa
MSc Applied Biochemistry (Master)
Universidade do Minho, Portugal
2022/10/30 - 2024/11/11 Investigation of the use of bacteriophages and their endolytic enzymes in the control of Enterococcus faecalis.
Co-supervisor of Romero Carlos de Albequerque Lima Filho
MSc in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2024 - 2024/06/21 A biorefinery system for valorisation of the macroalgae Palmaria palmata.
Supervisor of Francisco Teixeira Araújo
BSc in Applied Biochemistry (Degree)
Universidade do Minho, Portugal
2018 - 2023/12 New generation antigen delivery system for Candida albicans recombinant proteins as a vaccination strategy against systemic fungal infections
Co-supervisor of Augusto Alexandre Costa Barbosa
PhD in Molecular and Environmental Biology (PhD)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2022/05/09 - 2023/09/30 Tools for the sustainable exploitation of marine resources; enzymes for algae valorisation (Supervision of Research Grantee).
Supervisor of Diogo Henrique Félix Costa
Research Grantee
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2022/04/08 - 2023/06/30 Biotechnological solutions for the valorisation of aquatic biodiversity: screening for value added compounds (Supervision of Research Grantee).
Supervisor
Research Grantee
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2022/09/01 - 2022/09/30 Bacteriophage endolysins as new specific antimicrobials: production and purification of recombinant proteins (Supervision of Research Grantee)
Co-supervisor
Research Grantee
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2020/10/01 - 2022/03/31 Candida albican chitinase 3: production, purification and characterisation
Supervisor of Diogo Jorge Silva Ferreira
MSc in Applied Biochemistry (MBQA) (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2020/10/01 - 2022/02/03 Enhancing the protein engineering toolbox: in vivo recombination in E. coli for multi-site-directed mutagenesis
Supervisor of Diogo Henrique Félix Costa
MSc in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2015/09/01 - 2021/02/25 Enhancement of the biotechnological value of a commercial cold-adapted xylanase.
Supervisor of Mário Jorge Faria Barroca
PhD in Applied and Environmental Microbiology (PhD)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2019/12/30 - 2020/05/31 EcoAgriFood: innovative green products and processes to promote agri-food bioeconomy stability (Supervision of Research Grantee).
Supervisor of Mauro André Mendonça Da Cruz
Research Grantee (Scientific initiation)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2019/12/30 - 2020/05/31 EcoAgriFood: innovative green products and processes to promote agri-food bioeconomy stability (Supervision of Research Grantee).
Supervisor
Research Grantee
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2019/09 - 2020 Identifying the molecular determinants of protein solubility: surface residues.
Supervisor
MSc in Molecular Genetics (Master)
Universidade do Minho Departamento de Biologia, Portugal
2018/09 - 2019/12/11 A cold-adapted subtilisin-like serine protease: production, purification and application.
Co-supervisor of Ricardo Daniel Gavina Gonçalves
MSc in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

University of Iceland, Science Institute, Iceland
2018/09 - 2019/11/20 Development and optimisation of a novel method for multi-site-directed mutagenesis.
Supervisor of Mauro André Mendonça Da Cruz
MSc in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2017/09 - 2018/12/17 Novel enzymes for the agro-food industries
Supervisor of Ricardo José da Silva Cruz Pereira Faria
MSc. in Applied Biochemistry (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2017/09 - 2018/01/24 Metagenomics for enzyme bioprospection.
Co-supervisor of Sofia Granja Martins
MSc. in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

University College Cork National University of Ireland, Ireland
2016/09 - 2017/12/19 Deciphering the role of exposed surface residues in protein stability.
Supervisor of Ana Margarida Ribeiro Pacheco
MSc. in Applied Biochemistry (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2016/09 - 2017/04/20 Enzyme engineering for improved xylanase applicability and characterization of a xylan metabolizing Saccharomyces cerevisiae
Co-supervisor of Paulo Ruben Fernandes Veloso
MSc. in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2015/09 - 2017/03/01 Development of a novel recombinant subunit antigen as a vaccination target against candidiasis: Cht3 from Candida albican.
Co-supervisor of Augusto Alexandre Costa Barbosa
MSc. in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2014/09 - 2015/12/11 Engineering a commercial cold-adapted xylanase for improved low pH stability.
Supervisor of Gustavo de Almeida Santos
MSc. in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2014/09 - 2015/12/09 Understanding adaptation to pH in an industrially relevant glycoside hydrolase family 8 Xylanase.
Supervisor of Diogo Ribeiro Silva
MSc. in Molecular Genetic (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2014/05/01 - 2015/06/30 Unravelling the determinants of xylanase function and stability (Supervision of Research Grantee).
Supervisor of Mário Jorge Faria Barroca
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2013/09 - 2015/04/30 Genetic approaches for optimising the fed-batch production of a silk elastin-like polymer in E. coli.
Supervisor of Paulo Jorge Barbosa Rodrigues
MSc. in Applied Biochemistry (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2012/09 - 2013/12/10 Optimisation of the fed-batch production of a silk-elastin-like protein: overcoming acetate accumulation and plasmid instability.
Supervisor of Mário Jorge Faria Barroca
MSc. in Biophysics and Bionanosystems (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2011/09 - 2013/07/04 Thiol-disulphide oxidoreductases: production, purification and structural analysis of a cold adapted DsbA.
Supervisor of Catherine Oliveira Ferreira
MSc. in Molecular Genetics (Master)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2012 - 2013 Production, purification and development of an activity assay for a cold adapted DsbA.
Supervisor of Ana Sofia de Oliveira e Silva
BSc. in Applied Biology (Degree)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2012 - 2013 Optimisation of the production of a silk-elastin-like polymer for use in the automobile industry.
Supervisor of Jorge Miguel Cunha Ribeiro
BSc. in Applied Biology (Degree)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
2006 - 2007 Study of a blue oxidase from the white continent.
Supervisor of Frédéric Roulling
Msc in Biochemistry (Master)
Université de Liège, Belgium
2005 - 2006 pH stability, activity and random mutagenesis of a psychrophilic xylanase.
Supervisor of Virginia Brancato
MSc in Biochemistry (Master)
Université de Liège, Belgium
2003/05/12 - 2005/05/11 Development of a xylanase for use in the food industry (Supervision of post-doctoral study)
Supervisor of Anne Hoyoux
Post-Doc (Other)
Université de Liège, Belgium
2004 - 2005 Study of the activity and stability of a psychrophilic xylanase as a function of pH.
Supervisor of Florian Gillotin
MSc. in Biochemical Sciences (Master)
Université de Liège, Belgium
2003 - 2004 Study of the catalytic site residues of a family 8 glycoside hydrolase and isolation of new xylanases.
Supervisor of Gilles Gaspard
BSc. in Biochemistry (Degree)
Université de Liège, Belgium
2002 - 2003 Study of a family 8 xylanase: stability and study of the catalytic residues.
Co-supervisor of Sophie Leclercq
BSc. in Biochemistry: Biotechnology (Degree)
Université de Liège, Belgium
2002 - 2003 Study of a psychrophilic xylanase: thermostabilisation and study of the active site.
Co-supervisor of Davide Gustin
BSc. in Biochemical Sciences (Degree)
Université de Liège, Belgium
1999 - 2000 Study of Antarctic bacterial xylanases.
Co-supervisor of Frédéric Fux
BSc. in Biochemical Sciences (Degree)
Université de Liège, Belgium

Event participation

Activity description
Type of event
Event name
Institution / Organization
2011 - Current Public Dissemination: Demonstration of scientific activities at the laboratory of molecular biotechnology (LBM), CBMA, UMINHO, Braga, to various student groups from various Portuguese primary and secondary schools. Throughout the years. Public dissemination: of CBMA activities
2025/02/24 - 2025/02/28 Organisation of mentoring activity 'Laboratory of Molecular Biotechnology'. University students. At the centre of the action 2025
Universidade do Minho, Portugal
2025/02/17 - 2025/02/17 Public Dissemination. Organisation/presentation of activity titled ‘The extremophiles: friends of the extremes’. Primary School students. School of Life Sciences - Meet a scientist.
Universidade do Minho, Portugal
2025/02/14 - 2025/02/14 Public Dissemination. Organiser/lecturer of workshop titled ‘PCR in focus: techniques and applications’. General Public – adults.
Congress
ENEBIOQ '25
Universidade do Minho, Portugal
2024/12/18 - 2024/12/20 Public Dissemination. Organisation/presentation of mentoring activity titled ‘Exploring the world of proteins: experimental research in biotechnology’ Secondary School students. VEM – Let’s Experiment UMinho.
Universidade do Minho, Portugal
2024/11/20 - 2024/11/20 Public Dissemination. Organisation/presentation of activity titled ‘Life at the extremes’. Primary School students. Science & Technology week UMINHO
Universidade do Minho, Portugal
2024/09/27 - 2024/09/27 Public Dissemination. European Researcher’s Night (NEI2024). Extremophiles: tools for a more sustainable world. General Public.
Exhibition
European Researcher’s Night (NEI2024)
Universidade do Minho, Portugal
2024/04/15 - 2024/04/15 Public Dissemination. Organisation/presentation of activity titled ‘Life at the extremes: the extremophiles’. Primary School students. School of Life Sciences - Meet a scientist
Universidade do Minho, Portugal
2023/09/29 - 2023/09/29 Presentation of activity titled 'Promoting a sustainable economy through the exploration of marine microorganisms. '. General public dissemination event,
Exhibition
European Researcher Night 2023 (NEI2023), Braga
2023/09/29 - 2023/09/29 Presentation of activity titled 'Life at the extremes: the extremophiles'. General public dissemination event,
Exhibition
European Researcher Night 2023 (NEI2023), Braga
2022/09/30 - 2022/09/30 Presentation of activity titled 'Life at the edge: the extremophiles'. General public dissemination event,
Exhibition
European Researcher Night 2022 (NEI2022), Braga
2022/09/30 - 2022/09/30 Presentation of activity titled 'The role of marine microorganisms in the transition to a sustainable economy.'. General public dissemination event,
Exhibition
European Researcher Night 2022 (NEI2022), Braga
2022/04/26 - 2022/04/26 Organiser/lecturer of workshop titled 'PCR - a simple, versatile, multi-use technique'. General Public dissemination event: adults.
Workshop
IV Jornadas da Ciência.
2022/04/22 - 2022/04/22 Presentation of activity titled ' What is a scientist? The polar regions - a scientists trip to Antarctica.'. Public dissemination event for primary school students.
Workshop
Preschool education project - The North Pole and the Eskimos.
2021/09/24 - 2021/09/24 Presentation of activity titled 'Microbial cell factories for a sustainable growth'. General public dissemination event,
Exhibition
European Researcher Night 2021 (NEI), Braga
Universidade do Minho, Portugal
2019/05/02 - 2019/05/02 UPA UMinho Open Doors 2019: coordinator of activity titled 'Extremophiles and their Industrial Application'. General public dissemination event.
Exhibition
UPA UMinho Open Doors 2019
Universidade do Minho, Portugal
2019/02/28 - 2019/02/28 II Jornadas UM Futuro com Ciência, Braga, UMinho. Coordinator of activity on: professional opportunities for Scientists, a focus on biotechnologists/biochemists. Public dissemination event. II Jornadas UM Futuro com Ciência
Universidade do Minho Departamento de Biologia, Portugal
2016/05/11 - 2016/05/11 BioCientistas de Palmo e Meio: demonstration and supervision of activities demonstrating science, microbiology and biotechnology. Hands-on Science for primary-school children.
Exhibition
BioCientistas de Palmo e Meio
Universidade do Minho Departamento de Biologia, Portugal

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2024/11/11 Investigation of the use of bacteriophages and their endolytic enzymes in the control of Enterococcus faecalis.
(Thesis) Arguer
Romero Carlos de Albuquerque Lima Filho (Master)
Universidade do Minho, Portugal
2023/07/20 Exploration of the genetic resources of the Azores for development of an enzyme with applications in healthcare: development of a targeted approach based on nanotechnology (Enzyme4Thrombus).
(Thesis) Main arguer
Ivo Edgar Araújo Lopes (PhD)
Universidade dos Açores, Portugal
2022/12/16 Candida albican chitinase 3: production, purification and characterisation.
Supervisor
Diogo Jorge Silva Ferreira (Master)
Universidade do Minho, Portugal
2022/02/03 Enhancing the protein engineering toolbox: In vivo recombination in E. coli for multi-site-directed mutagenesis.
Supervisor
Diogo Henrique Félix Costa (Master)
Universidade do Minho Departamento de Biologia, Portugal
2021/06/28 Chronic pain and behavior: a two-way street.
(Thesis) Arguer
Ana Luísa Miranda da Silva (Other)
Universidade do Minho Departamento de Biologia, Portugal
2021/02/25 Enhancement of the biotechnological value of a commercial cold-adapted xylanase.
Supervisor
Mário Jorge Faria Barroca (PhD)
Universidade do Minho Departamento de Biologia, Portugal
2020/10/02 The role of molecular flexibility in temperature adaptation of subtilases.
(Thesis) Main arguer
Kristinn Ragnar Óskarsson (PhD)
School of Engineering and Natural Sciences, University of Iceland, Iceland
2019/12/11 A cold-adapted subtilisin-like serine protease: production, purification and application.
Supervisor
Ricardo Daniel Gavina Gonçalves (Master)
Universidade do Minho Departamento de Biologia, Portugal
2019/11/20 Development and optimisation of a novel method for multi-site-directed mutagenesis.
Supervisor
Mauro André Mendonça Da Cruz (Master)
2019/10/16 Glycanzyme - Characterisation of novel enzymes for protein glycoengineering.
(Thesis) Main arguer
Marlene Baptista (Master)
Universidade do Minho Departamento de Engenharia Biológica, Portugal
2018/12/17 Novel enzymes for the agro-food industries.
Supervisor
Ricardo José da Silva Cruz Pereira Faria (Master)
Universidade do Minho Departamento de Biologia, Portugal
2018/11/20 Effect of site-directed mutagenesis on the efficiency of the amylase gene of Bacillus licheniformis.
(Thesis) Main arguer
Muhammad Adnan Ashraf (PhD)
University of Agriculture Faisalabad Faculty of Sciences, Pakistan
2018/06/21 Ionic effects on subunit interactions in a cold-active alkaline phosphatase from the marine bacterium Vibrio splendidus.
(Thesis) Main arguer
Jens Guðmundur Hjörleifsson (PhD)
School of Engineering and Natural Sciences, University of Iceland, Iceland
2018/01/24 Metagenomics for Enzyme Bioprospection.
Supervisor
Sofia Granja Martins (Master)
Universidade do Minho Departamento de Biologia, Portugal
2017/12/19 Deciphering the role of exposed surface residues in protein stability.
Supervisor
Ana Margarida Ribeiro Pacheco (Master)
Universidade do Minho Departamento de Biologia, Portugal
2017/04/20 Enzyme engineering for improved xylanase applicability and characterization of a xylan metabolizing Saccharomyces cerevisiae.
Supervisor
Paulo Ruben Fernandes Veloso (Master)
Universidade do Minho Departamento de Biologia, Portugal
2017/03/01 Development of a novel recombinant subunit antigen as a vaccination target against candidiasis: Cht3 from Candida albicans.
Supervisor
Augusto Alexandre Costa Barbosa (Master)
Universidade do Minho Departamento de Biologia, Portugal
2015/12/11 Engineering a commercial cold-adapted xylanase for improved low pH stability.
Supervisor
Gustavo de Almeida Santos (Master)
Universidade do Minho Departamento de Biologia, Portugal
2015/12/09 Understanding adaptation to pH in an industrially relevant glycoside hydrolase family 8 xylanase.
Supervisor
Diogo Ribeiro Silva (Master)
Universidade do Minho Departamento de Biologia, Portugal
2015/12/07 Engineering novel metabolic pathways for cheese whey valorization.
(Thesis) Main arguer
Sara Isabel Leite Baptista (Master)
Universidade do Minho Departamento de Engenharia Biológica, Portugal
2015/06/29 Engineering of fatty acid production and secretion in Saccharomyces cerevisiae.
(Thesis) Arguer
Gabriela Filipa Lopes Ribeiro (PhD)
Universidade do Minho Departamento de Biologia, Portugal
2014/12/15 The physiology and biochemistry of Methylacidiphilum fumariolicum SolV.
(Thesis) Main arguer
Fábio José dos Santos Trigo (Master)
Universidade do Minho Departamento de Biologia, Portugal
2014/04/30 Genetic approaches for optimising the fed-batch production of a silk elastin-like polymer in E. coli.
Supervisor
Paulo Jorge Barbosa Rodrigues (Master)
Universidade do Minho Departamento de Biologia, Portugal
2013/12/19 Engineering of core pentose metabolism in Saccharomyces cerevisiae for bio-ethanol production.
(Thesis) Arguer
Filipa Alexandra Barroso Pereira (PhD)
Universidade do Minho Departamento de Biologia, Portugal
2013/12/17 Structural-functional studies of plasma membrane carboxylate transporters in yeast.
(Thesis) Arguer
Joana Margarida Sá Pessoa da Graça Santos (PhD)
Universidade do Minho Departamento de Biologia, Portugal
2013/12/10 Optimisation of the fed-batch production of a silk-elastin-like protein: overcoming acetate accumulation and plasmid instability.
Supervisor
Mário Jorge Faria Barroca (Master)
Universidade do Minho Departamento de Biologia, Portugal
2013/07/25 Production, purification and development of an activity assay for a cold adapted DsbA
Supervisor
Ana Sofia Rodrigues de Oliveira e Silva (Other)
Universidade do Minho Departamento de Biologia, Portugal
2013/07/23 Optimisation of the production of a silk-elastin like polymer for use in the automobile industry: genetic approaches
Supervisor
João M. Cunha Ribeiro (Other)
Universidade do Minho Departamento de Biologia, Portugal
2013/07/04 Thiol-disulphide oxidoreductases: production, purification and structural analysis of a cold adapted DsbA.
Supervisor
Catherine Oliveira Ferreira (Master)
Universidade do Minho Departamento de Biologia, Portugal
2010/10/18 Cloning and expression of antimicrobial peptides and their evaluation for biotechnological applications.
(Thesis) Arguer
André Manual Abreu da Costa (Master)
Universidade do Minho Departamento de Biologia, Portugal
2006/02/24 Structural insights into extremozymes: a study of Sulfolobus acidocaldarius and Moritella profunda aspartate carbamoyltransferase, and of Pseudoalteromonas haloplanktis xylanase pXyl
(Thesis) Arguer
Dirk De Vos (PhD)
Universiteit Gent, Belgium
2003 Study of a family 8 xylanase: stability and study of the catalytic residues
Supervisor
Sophie Leclercq (Other)
Université de Liège, Belgium
2003 Study of a psychrophilic xylanase: thermostabilisation and study of the active site.
Supervisor
David Gustin (Other)
Université de Liège, Belgium

Committee member

Activity description
Role
Institution / Organization
2022/02 - Current Member of the CCAI_EC (Coordinating Committee for the Evaluation of Researchers) at the School of Sciences, University of Minho. Coordination of the evaluation process, the rules, regulations, and the evaluators and evaluation results for the evaluation of researchers at the University of Minho.
Member
Universidade do Minho Escola de Ciências, Portugal
2013/09 - 2020/12 Member of the Scientific Council of the School of Sciences, Unversity of Minho. Three times elected to scientific council as representative of researchers.
Member
Universidade do Minho Escola de Ciências, Portugal
2010/05/31 - 2010/06/02 Member of the Organising Committee of the XXXV Jornadas Portuguesas de Genética (Portuguese Genetics Society).
Member
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2025/02 - Current Structure and Function of Biomolecules, BSc in Applied Biology. Lecturer (2025-ongoing). Theory and Practicals Structure and Function of Biomolecules (Licenciatura) Universidade do Minho, Portugal
2011/09 - Current Molecular Biotechnology, MSc in Applied Biochemistry. Coordinator (2015-2020) and lecturer (2011-ongoing). Theory and Practicals (20-25 hours) Bioquímica Aplicada (Mestrado) Universidade do Minho Departamento de Biologia, Portugal
2010/09 - Current Genetics and Molecular Biotechnology (GBM), MSc in Molecular Genetics. Coordinator (2011-2014; 2019-ongoing) and lecturer (2010-ongoing). Theory and Practicals (30-35 hours) Genética Molecular (Mestrado) Universidade do Minho Departamento de Biologia, Portugal
2010 - Current Numerous Advanced Courses: Biophysics and Bionanosystems (2010-2011, 2015-2018); Expression and Purification of Proteins (2010); Microbial Physiology (2013); Campus de Mar (2014); Biopolymers (2011, 2015, 2016, 2018); Microbiology: Biological Engineering (2019). Advanced Courses Universidade do Minho, Portugal

Evaluation committee

Activity description
Role
Institution / Organization Funding entity
2022/02 - Current Member of CCAI_EC (Coordinating Committee for the Evaluation of Researchers) at the School of Sciences, University of Minho.
Member
Universidade do Minho Escola de Ciências, Portugal
2015 - Current Project Reviewer for Portugal 2020 project proposals at the Portugueses National Agency for Innovation (Agência Nacional de Inovação - ANI), 2015 and 2017.
Evaluator
Agência Nacional de Inovação SA, Portugal Agência Nacional de Inovação SA
2023 - 2023 Project Reviewer for project proposals at the Hebrew University Center for Sustainability (HUJI), Israel.
Evaluator
Hebrew University Center for Sustainability, Israel
2023 - 2023 Evaluator of researchers performance at the ITQB (Instituto de Tecnologia Química e Biológica António Xavier), Oeiras, Portugal.
Evaluator
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2022 - 2022 Evaluator of completed projects financed by the Portugueses National Agency for Innovation (Agência Nacional de Inovação - ANI).
2017 - 2017 Supervisor/Relator of review process for Portugal 2020 project proposals at the Portugueses National Agency for Innovation (Agência Nacional de Inovação - ANI).
Coordinator
Agência Nacional de Inovação SA, Portugal Agência Nacional de Inovação SA
2015 - 2015 Project Reviewer for project proposals at the Biotechnology and Biological Sciences Research Council (BBSRC), U.K
Evaluator
Biotechnology and Biological Sciences Research Council, United Kingdom Biotechnology and Biological Sciences Research Council
2014 - 2014 Project Reviewer for project proposals for funding by the Icelandic research fund (IRF) at the Icelandic Centre for Research, Iceland (RANNIS).
Evaluator
Icelandic Centre for Research (RANNIS), Iceland Icelandic Centre for Research (RANNIS)

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2025/01/30 Press Release: Profile Researchers - Tony Collins ECUM Newsletter Jan. 2025
2017/02/16 Enzyme studied at UMinho used in bakeries worldwide (Enzima estudada na UMinho usada em padarias de todo o mundo). Correio do Minho
2017/02/16 Enzyme studied at UMinho strengthens bread dough: innovation of Tony Collins in bakeries worldwide (Enzima estudada na UMinho fortalece a massa do pão: Inovação de Tony Collins está nas padarias do mundo). Diário do Minho
2017/02/16 Bakeries worldwide use enzyme studied in Portugal (Padarias de todo o mundo usam enzima estudada em Portugal). Diário de Notícias
2017/02/15 Enzyme studied at UMINHO is used in bakeries worldwide (Enzima estudada na UMinho é usada nas padarias de todo o mundo). VerPortugal
2017/02/15 Enzyme which leads to softer bread developed by UMinho researcher (Enzima que faz pão macio desenvolvida por investigador da UMinho). TV Europa
2017/02/15 The enzyme which conquered the bakeries of the whole world (A enzima que conquistou as padarias do mundo inteiro) Canal Superior TV
2017/02/15 Enzyme studied at UMinho is used in bakeries worldwide (Enzima estudada na UMinho é usada nas padarias de todo o mundo). Braga TV
2017/02/15 Enzyme investigated at the University of Minho used in bakeries worldwide (Enzima desenvolvida na Universidade do Minho é usada nas panificadoras em todo o mundo). Expresso
2016/12/21 Life at the Extremes (A vida nos extremos) Journal interview in relation to research work and scientific background and interests. Nos Jornal online da UMinho

Interview (tv / radio show)

Program Topic
2017/03/21 - 2017/03/21 Ponto de Partida 44 - Radio Antena 1 (Portuguese National Radio Station) Extremophiles: life at the extreme (Extremófilos, a vida nos limites).
2017/02/15 - 2017/02/15 RUM/AAUMTV: Rádio Universitária do Minho/Online TV Enzyme used in bakeries all over the world (Enzima usada nas padarias de todo o mundo).

Scientific expedition

Activity description Institution / Organization
2003/01 - 2003/03 Research scientist on the 53rd (2002-2003) Antarctic Expedition to the French Research Station at Dumont d'Urville in Terre-Adelie, Antarctica. Project 'Isolation of psyrchrophilic microorganisms producting cold-adapted enzymes of biotechnological interest (lead researcher). Expedition financed by both private (Puratos NV) and public (FNRS) funds. l'Institut polaire français Paul Emile Victor (IPEV), France

Fonds de la Recherche Scientific, Belgium

Université de Liège, Belgium

Puratos NV, Belgium
1999/12 - 2000/03 Research scientist on the 51st (1999-2000) Antarctic Expedition to the French Research Station at Dumont d'Urville in Terre-Adelie, Antarctica. Project 'Understanding enzyme adaptation to cold: isolation of cold-adapted organisms (lead researcher). l'Institut polaire français Paul Emile Victor (IPEV), France

Fonds de la Recherche Scientific, Belgium

Université de Liège, Belgium
Distinctions

Award

2022 Honorable mention for poster titled 'A novel method for single and multi-site-directed mutagenesis' presented at III CBED Symposium - Biotechnology to Shape the Future.
Universidade do Minho Centro de Engenharia Biológica, Portugal
2007 EMBO Long Term Fellowship
European Molecular Biology Organization (EMBO), Germany
2004 Laureate of the International Society for Extremophiles (ISE) award 2004 for studies on a cold-adapted xylanase.
International Society for Extremophiles, Japan
2001 Laureate of the Region Wallonne best presentation prize at Bioforum 2001, Liege, Belgium
Conseil économique et social de Wallonie, Belgium
2000 Laureate of the Region Wallonne best presentation prize at Bioforum 2000, Liege, Belgium
Conseil économique et social de Wallonie, Belgium

Other distinction

2002 Research scientist on 53rd (2002-2003) Antarctic Expedition to French Research Station at Dumont d'Urville in Terre-Adelie, Antarctica.
Puratos NV, Belgium

Fonds de la Recherche Scientific, Belgium

l'Institut polaire français Paul Emile Victor (IPEV), France
1999 Research scientist on 51st (1999-2000) Antarctic Expedition to French Research Station at Dumont d'Urville in Terre-Adelie, Antarctica.
Fonds de la Recherche Scientific, Belgium

l'Institut polaire français Paul Emile Victor (IPEV), France