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Andreia Marques is a microbiologist with a PhD in Veterinary Sciences and MSc in Applied Microbiology. She has been working in scientific research for over 10 years now. She is currently a Post-Doc Researcher at the Pathogen Genome Bioinformatics and Computational Biology group. The focus of her PhD research was the study of innate immunity, the identification of biomarkers useful in the veterinary medicine field (i.e. acute phase proteins and miRNAs), but she also worked in other teams and topics, such as microbiology, genomics and proteomics, genetic engineering and plant-bacteria interaction. She is passionate about learning and knowledge transfer between different areas of study, techniques and approaches and has had the great opportunity of working in different countries in Europe: Portugal, Italy and Slovakia. Her current interests are: health sciences, microbiology, genome bioinformatics, Enterobacteriaceae spp. phage genomics, evolution and biomedical applications using phage lysins against resistant Gram-negative bacteria.
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Identification

Personal identification

Full name
Andreia Filipa Tomás Marques

Citation names

  • Marques, Andreia
  • Marques, A. T.
  • Marques, A. Tomas
  • Marques, Andreia T.
  • Marques, AT

Author identifiers

Ciência ID
DC17-69DB-8BB9
ORCID iD
0000-0001-7302-1193
Researcher Id
JYP-0342-2024
Scopus Author Id
56799867000

Email addresses

  • amarques@farm-id.pt (Professional)

Addresses

  • Faculdade de Ciências da Universidade de Lisboa, Edificio C2, 1749-016, Campo Grande, Lisboa, Lisboa, Portugal (Professional)
  • FARM-ID, Associação da Faculdade de Farmácia para a Investigação e Desenvolvimento, Faculdade de Farmácia da Universidade de Lisboa, Avenida Professor Gama Pinto, 1649-003, Lisboa, Lisboa, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Microbiology
  • Natural sciences - Biological Sciences - Cell Biology
  • Natural sciences - Biological Sciences - Biochemistry
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Agrarian Sciences - Veterinary Sciences
  • Medical and Health Sciences - Medical Biotechnology

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
Italian Upper intermediate (B2) Proficiency (C2) Upper intermediate (B2) Proficiency (C2)
Education
Degree Classification
2014 - 2017
Concluded
 Veterinary and Animal Science (Dottorato di Ricerca)
Università Degli Studi di Milano Dipartimento di Medicina Veterinaria, Italy
"Molecular Biomarkers of Welfare in Poultry" (THESIS/DISSERTATION)
2009 - 2011
Concluded
 Applied Microbiology (Mestrado)
Universidade de Lisboa Faculdade de Ciências, Portugal
"Role of a tripartite efflux pump in the symbiosis between Sinorhizobium meliloti and leguminous plants" (THESIS/DISSERTATION)
2006 - 2009
Concluded
 Microbiology (Licenciatura)
Universidade de Lisboa Faculdade de Medicina, Portugal
2005 - 2006
Attended
 Enfermagem (Licenciatura)
Escola Superior de Enfermagem de Lisboa Pólo Calouste Gulbenkian, Portugal
Affiliation

Science

Category
Host institution 		Employer
2022/11 - Current Contracted Researcher (Research) FARM-ID, Associação da Faculdade de Farmácia para a Investigação e Desenvolvimento, Portugal
2019/05 - 2021/12 Contracted Researcher (Research) FARM-ID, Associação da Faculdade de Farmácia para a Investigação e Desenvolvimento, Portugal
2019/01 - 2019/03 Researcher (Research) Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2017/05 - 2018/03 Researcher (Research) Università Degli Studi di Milano Dipartimento di Medicina Veterinaria, Italy
2016/05 - 2016/09 Visiting Researcher (Research) Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2016/02 - 2016/05 Visiting Researcher (Research) Knižnica Univerzity veterinárskeho lekárstva a farmácie v Košiciach, Slovakia
2013/03 - 2013/12 Research Trainee (Research) Instituto de Investigação Científica Tropical, Portugal
2013/10 - 2013/11 Visiting Researcher (Research) Università degli Studi di Milano Dipartimento di Scienze Veterinarie e Sanità Pubblica, Italy
2013/06 - 2013/07 Visiting Researcher (Research) Slovenská Polnohospodárska Univerzita v Nitre, Slovakia
2010/04 - 2010/12 Contracted Researcher (Research) Universidade de Lisboa Instituto Superior Técnico, Portugal
Projects

Contract

Designation Funders
2022/11 - Current In evolution and disease: the underlying role of Helicobacter prophages
PTDC/BTM-TEC/3238/2020
Post-doc
FARM-ID, Associação da Faculdade de Farmácia para a Investigação e Desenvolvimento, Portugal
Ongoing
2019/04 - 2021/12 Phage-Enzybiotic: dealing with critical pathogenic antibiotic-resistant bacteria
PTDC/BTM-SAL/28978/2017
Post-doc
FARM-ID, Associação da Faculdade de Farmácia para a Investigação e Desenvolvimento, Portugal
Concluded
2010/04 - 2010/12 Regulation of exopolysaccharide biosynthesis and virulence of Burkholderia cepacia by protein-tyrosine phosphorylation
PTDC/BIA-MIC/65210/2006
Research Fellow
Universidade de Lisboa Instituto Superior Técnico, Portugal
Concluded
Outputs

Publications

Book chapter
  1. Vale, Filipa F.; Tanoeiro, Luís; Marques, Andreia T.. "16S Genomics for Diagnosing Invasive Bacterial Infection". In Encyclopedia of Infection and Immunity, 287-300. Elsevier, 2022.
    10.1016/b978-0-12-818731-9.00213-5
Conference poster
  1. Lecchi, C.; Marques, A. T. (DC17-69DB-8BB9); Redegalli, M.; Carisetti, M.; Meani, S.; Vinco, LJ.; Ceciliani, F.. "Circulating extracellular miR-22, miR-155, and miR-365 as potential biomarkers to assess the turkey (Meleagris gallopavo) welfare". Paper presented in 5th European Veterinary Immunology Workshop (EVIW), Vienna, Austria, 2015.
  2. Lecchi, C.; Rota, N.; Vitali, A.; Marques, A. T. (DC17-69DB-8BB9); Lacetera, N.. "Effects of temperature on phagocytosis and reactive oxygen species production in bovine polymorphonuclear cells". Paper presented in 5th European Veterinary Immunology Workshop (EVIW), Vienna, Austria, 2015.
  3. Marques, A. T. (DC17-69DB-8BB9); Rigamonti, S.; Lecchi, C.; Grilli, G.; Nodari, SR.; Vinco, LJ.; Ceciliani, F.. "Molecular studies on adipose tissue in farm animals: searching for welfare biomarkers". Paper presented in COST Action FA1002 – Farm Animal Proteomics - Final Meeting, Milan, Italy, 2014.
  4. Marques, A. T. (DC17-69DB-8BB9); Ferreira, AM.; Araújo, SS.; Restelli, L.; Lecchi, C.; Almeida, AM.; Ceciliani, F.. "Gustducin gene expression in sheep, goats and water-buffalo to unravel taste signaling". Paper presented in COST Action FA1002 – Farm Animal Proteomics - Final Meeting, Milan, Italy, 2014.
  5. Marques, A. T. (DC17-69DB-8BB9); Ferreira, AM.; Araújo, SS.; Restelli, L.; Lecchi, C.; Almeida, AM.; Ceciliani, F.. "Gustducin gene expression in sheep, goats and water-buffalo to unravel taste signaling". Paper presented in VI Congress of the “Portuguese Society of Veterinary Sciences", Oeiras, Portugal, 2014.
  6. Santos, MR.; Marques, A. T. (DC17-69DB-8BB9); Becker, JD.; Moreira, LM.. "Comparative transcriptomic analyses of the SMc03169 mutant from Sinorhizobium meliloti and its role in symbiosis with leguminous plants". Paper presented in 10th European Nitrogen Fixation Congress (ENFC), Muniche, Germany, 2012.
  7. Santos, MR.; Marques, A. T. (DC17-69DB-8BB9); Becker, JD.; Moreira, LM.. "Characterization of the TetR transcriptional regulator SMc03169 and its contribution to symbiosis between Sinorhizobium meliloti and leguminous plants". Paper presented in XXXVII Portuguese Genetics Conference, Lisbon, Portugal, 2012.
  8. Marques, A. T. (DC17-69DB-8BB9); Santos, MR.; Becker, JD.; Moreira, LM.. "New molecular determinants of the symbiosis between Sinorhizobium meliloti and Medicago sativa". Paper presented in Microbiotec’11, Braga, Portugal, 2011.
  9. Marques, A. T. (DC17-69DB-8BB9); Santos, MR.; Moreira, LM.. "Role of the Cpx two component regulatory system and a MFS transporter in the symbiosis between Sinorhizobium meliloti and leguminous plants". Paper presented in 17th International Congress Nitrogen Fixation, Fremantle, Western Australia, 2011.
Journal article
  1. Gonçalves, Tiago; Marques, Andreia T.; Manageiro, Vera; Tanoeiro, Luis; Vital, Joana S.; Duarte, Aida; Vítor, Jorge M.B.; et al. "Antimicrobial activity of prophage endolysins against critical Enterobacteriaceae antibiotic-resistant bacteria". International Journal of Pharmaceutics 651 (2024): 123758. http://dx.doi.org/10.1016/j.ijpharm.2023.123758.
    10.1016/j.ijpharm.2023.123758
  2. Morais, Diana; Tanoeiro, Luís; Marques, Andreia; Gonçalves, Tiago; Duarte, Aida; Matos, António; Vital, Joana; et al. "Liposomal Delivery of Newly Identified Prophage Lysins in a Pseudomonas aeruginosa Model". International Journal of Molecular Sciences 23 17 (2022): 10143. http://dx.doi.org/10.3390/ijms231710143.
    10.3390/ijms231710143
  3. Tanoeiro, Luís; Oleastro, Mónica; Nunes, Alexandra; Marques, Andreia T.; Duarte, Sílvia Vaz; Gomes, João Paulo; Matos, António Pedro Alves; Vítor, Jorge M. B.; Vale, Filipa F.. "Cryptic Prophages Contribution for Campylobacter jejuni and Campylobacter coli Introgression". Microorganisms 10 3 (2022): 516. http://dx.doi.org/10.3390/microorganisms10030516.
    10.3390/microorganisms10030516
  4. Marques, Andreia T.; Tanoeiro, Luís; Duarte, Aida; Gonçalves, Luisa; Vítor, Jorge M. B.; Vale, Filipa F.. "Genomic Analysis of Prophages from Klebsiella pneumoniae Clinical Isolates". Microorganisms 9 11 (2021): 2252. http://dx.doi.org/10.3390/microorganisms9112252.
    Published • 10.3390/microorganisms9112252
  5. Vale, Filipa F.; Vítor, Jorge M.B.; Marques, Andreia T.; Azevedo-Pereira, José Miguel; Anes, Elsa; Goncalves, Joao. "Origin, phylogeny, variability and epitope conservation of SARS-CoV-2 worldwide". Virus Research 304 (2021): 198526. http://dx.doi.org/10.1016/j.virusres.2021.198526.
    Published • 10.1016/j.virusres.2021.198526
  6. Marques, Andreia T.; Vítor, Jorge M. B.; Santos, Andrea; Oleastro, Mónica; Vale, Filipa F.. "Trends in Helicobacter pylori resistance to clarithromycin: from phenotypic to genomic approaches". Microbial Genomics 6 3 (2020): http://dx.doi.org/10.1099/mgen.0.000344.
    10.1099/mgen.0.000344
  7. Restelli, Laura; Marques, Andreia T.; Savoini, Giovanni; Invernizzi, Guido; Carisetti, Michela; Lecchi, Cristina; Bendixen, Emoke; Ceciliani, Fabrizio. "Saturated or unsaturated fat supplemented maternal diets influence omental adipose tissue proteome of suckling goat-kids". Research in Veterinary Science 125 (2019): 451-458. http://dx.doi.org/10.1016/j.rvsc.2017.10.009.
    Published • 10.1016/j.rvsc.2017.10.009
  8. Marques, Andreia Tomás; Anjo, Sandra I.; Bhide, Mangesh; Varela Coelho, Ana; Manadas, Bruno; Lecchi, Cristina; Grilli, Guido; Ceciliani, Fabrizio. "Changes in the intestinal mucosal proteome of turkeys (Meleagris gallopavo) infected with haemorrhagic enteritis virus". Veterinary Immunology and Immunopathology 213 (2019): 109880. http://dx.doi.org/10.1016/j.vetimm.2019.06.001.
    Published • 10.1016/j.vetimm.2019.06.001
  9. Nordio, Laura; Marques, Andreia T.; Lecchi, Cristina; Luciano, Alberto M.; Stefanello, Damiano; Giudice, Chiara. "Immunohistochemical Expression of FXR1 in Canine Normal Tissues and Melanomas". Journal of Histochemistry & Cytochemistry 66 8 (2018): 585-593. http://dx.doi.org/10.1369/0022155418766292.
    Published • 10.1369/0022155418766292
  10. Marques, Andreia T.; Nordio, Laura; Lecchi, Cristina; Grilli, Guido; Giudice, Chiara; Ceciliani, Fabrizio. "Widespread extrahepatic expression of acute-phase proteins in healthy chicken (Gallus gallus) tissues". Veterinary Immunology and Immunopathology 190 (2017): 10-17. http://dx.doi.org/10.1016/j.vetimm.2017.06.006.
    Published • 10.1016/j.vetimm.2017.06.006
  11. Banco, B.; Grilli, G.; Giudice, C.; Marques, A. Tomas; Cotti Cometti, S.; Visigalli, G.; Grieco, V.. "Immunophenotyping of Rabbit Testicular Germ and Sertoli Cells Across Maturational Stages". Journal of Histochemistry & Cytochemistry 64 11 (2016): 715-726. http://dx.doi.org/10.1369/0022155416669918.
    Published • 10.1369/0022155416669918
  12. Ferreira, Ana M.; Marques, Andreia T.; Fontanesi, Luca; Thulin, Carl-Gustaf; Sales-Baptista, Elvira; Araújo, Susana S.; Almeida, André M.. "Identification of a Bitter-Taste Receptor Gene Repertoire in Different Lagomorphs Species". Frontiers in Genetics 7 (2016): http://dx.doi.org/10.3389/fgene.2016.00055.
    Published • 10.3389/fgene.2016.00055
  13. Marques, Andreia Tomás; Lecchi, Cristina; Grilli, Guido; Giudice, Chiara; Nodari, Sara Rota; Vinco, Leonardo J.; Ceciliani, Fabrizio. "The effect of transport stress on turkey (Meleagris gallopavo) liver acute phase proteins gene expression". Research in Veterinary Science 104 (2016): 92-95. http://dx.doi.org/10.1016/j.rvsc.2015.11.014.
    Published • 10.1016/j.rvsc.2015.11.014
  14. Lecchi, C.; Marques, A. T.; Redegalli, M.; Meani, S.; Vinco, L. J.; Bronzo, V.; Ceciliani, F.. "Circulating extracellular miR-22, miR-155, and miR-365 as candidate biomarkers to assess transport-related stress in turkeys". animal 10 7 (2016): 1213-1217. http://dx.doi.org/10.1017/s1751731115003043.
    Published • 10.1017/s1751731115003043
  15. Ceciliani, Fabrizio; Soler, Laura; Grilli, Guido; Marques, Andreia T.; Giudice, Chiara; Lecchi, Cristina. "The localization and differential expression of Serum Amyloid A in bovine liver and adipose tissue depots". Veterinary Immunology and Immunopathology 168 1-2 (2015): 35-39. http://dx.doi.org/10.1016/j.vetimm.2015.08.004.
    Published • 10.1016/j.vetimm.2015.08.004
  16. Monteiro Ferreira, Ana; Tomás Marques, Andreia; Bhide, Mangesh; Cubric-Curik, Vlatka; Hollung, Kristin; Knight, Christopher Harold; Raundrup, Katrine; et al. "Sequence Analysis of Bitter Taste Receptor Gene Repertoires in Different Ruminant Species". PLOS ONE 10 6 (2015): e0124933. http://dx.doi.org/10.1371/journal.pone.0124933.
    Published • 10.1371/journal.pone.0124933
  17. Santos, Mário R.; Marques, Andreia T.; Becker, Jörg D.; Moreira, Leonilde M.. "TheSinorhizobium melilotiEmrR Regulator Is Required for Efficient Colonization ofMedicago sativaRoot Nodules". Molecular Plant-Microbe Interactions 27 4 (2014): 388-399. http://dx.doi.org/10.1094/mpmi-09-13-0284-r.
    Published • 10.1094/mpmi-09-13-0284-r
Thesis / Dissertation
  1. Marques, A. T.. "Molecular Biomarkers of Welfare in Poultry". PhD, Università degli Studi di Milano Dipartimento di Scienze Veterinarie e Sanità Pubblica, 2017.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2015/07 Circulating extracellular miR-22, miR-155, and miR-365 as potential biomarkers to assess the turkey (Meleagris gallopavo) welfare Veterinary and Animal Science Annual Meeting (VAS Days)
Univer (Milão, Italy)
2015/04 Response to road transportation in turkey (Meleagris gallopavo): the acute phase protein expression in liver and adipose tissue 54° Convegno Nazionale SIPA
(Forli, Italy)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2015 - 2015 Validazione molecolare mediante qPCR di proteine correlate al metabolismo in tessuto adiposo di capra
Co-supervisor of Michela Carisetti
 Corso di Laurea in Triennale in Biotecnologie Veterinarie (Degree)
Università degli Studi di Milano Dipartimento di Scienze Veterinarie e Sanità Pubblica, Italy
2015 - 2015 Quantificazione mediante qPCR di miRNA sierici come potenziali biomarkers per valutare lo stress da trasporto nel tacchino
Co-supervisor of Miriam Redegalli
 Corso di Laurea in Triennale in Biotecnologie Veterinarie (Degree)
Università degli Studi di Milano Dipartimento di Scienze Veterinarie e Sanità Pubblica, Italy
2014 - 2014 The expression of acute phase proteins and adiponectin in adipose tissue of healthy and transport stressed turkey
Co-supervisor of Sara Rigamonti
Università degli Studi di Milano Dipartimento di Scienze Veterinarie e Sanità Pubblica, Italy