Gabriela Moura (C419-8D2C-07A1)

Curriculum Vitae

Gabriela Moura

Gabriela Moura is PI of 6 FCT or CCDRC projects with a global budget of 1,4M€ (BIA-BCM/72251, 130K€ and BIA-GEN/110383, 193K€; BIA-MIC/31849, 239K€; CENTRO-08-5864-FSE-000039, 280k€; CENTRO-01-01D2-FEDER-000001, 310k€; 2022.01376.PTDC, 249k€), from which >500k€ are to be executed in the near future. She has been involved as team member in 27 national and international projects, including 2 EU-FP7 projects (Sybaris and Mephitis) and 1 HSFP project. She published 52 papers in ISI journals, including Genome Research, PLoS Biology, PNAS, EMBO J., Trends in Genetics and Genome Biology. She has also published 3 book chapters, 3 papers in national journals with referee, 25 papers in conference proceedings and is regular reviewer for 10 ISI indexed journals. She has a total impact factor of 260.6, an average Impact Factor of 5.01, a total number of citations of 1300 and an h-index of 22. She was invited for 20 oral presentations in national and international meetings and 38 of her abstracts have been selected for oral presentations in national and international congresses. Co-organized the GenomePT Symposium (2019-Vila do Conde, 100 participants), XLI Jornadas Portuguesas de Genética (2017-Aveiro, 100 participants), XXIII international tRNA meeting (2010-Aveiro, 250 participants from 25 countries), III National RNA Meeting (2008-Aveiro, 120 participants), XV National Congress of Biochemistry (2006-Aveiro, 500 participants), 3ª Reunião Anual de Biologia do RNA (2006-Aveiro, 120 participants), the XII National Yeast Meeting (2004-Aveiro, 100 participants) and various advanced courses of the Aveiro Biology and Medical Sciences Departments. The main objective of her research is to understand the process of protein synthesis fidelity, determine how the environment and diseases impact on gene translation errors and elucidate its consequences on genome evolution and health. Therefore, she works at the interface of Cell Biology, Biochemistry, Molecular Biology, Genetics and Microbiology, using yeast and zebra fish as model systems, and in silico tools that she is developing in collaboration with the Bioinformatics Group of the University of Aveiro. This group integrates researchers with very different research backgrounds, such as biologists (Department of Biology and Health Sciences Program, University of Aveiro), software engineers (Institute of Electronics and Telematics Engineering, IEETA, University of Aveiro) and mathematicians (Department of Mathematics, University of Aveiro), in a strongly interdisciplinary environment. She coordinates the Medical Genomics Group of the Aveiro Institute for Biomedicine – iBiMED, (http://www.ua.pt/ibimed/), is a founding member of the Aveiro Bioinformatics Laboratory (www.bioinformatics.ua.pt) and participated actively in the implementation of the Aveiro RNA Biology Laboratory (www.ua.pt/ii/rnomics). She also leads the Genomics facility of iBiMED, which is equipped with two microarray platforms, Illumina and Nanopore DNA sequencers and NGS support equipment, computation and software and is part of the National Consortium for Genome Sequencing and Analysis (GenomePortugal), which is integrated in the National Roadmap of Research Infrastructures. Currently, this platform integrates the author, 1 wet-lab technician and 2 bioinformatics technicians. Ongoing genome sequencing and analysis focus on comparative and evolutionary genomics of yeast, mouse, human cells and tissues, with particular emphasis on detection of single nucleotide polymorphisms (SNPs), copy number variants (CNVs), indels, loss of heterozigozity (LOH) and aneuploidies. Bioinformatics pipelines for analysis of RNASeq, methylSeq and metagenomics data are permanently being implemented and updated, in collaboration with the Aveiro Bioinformatics Lab.

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Identification

Personal identification

Full name: Gabriela Moura

Citation names

Moura, Gabriela
Moura, G.R.
Moura, G.

Author identifiers

Ciência ID: C419-8D2C-07A1
ORCID iD: 0000-0003-2243-6123
Google Scholar ID: https://scholar.google.pt/citations?user=RBvIBz8AAAAJ

Telephones

Telephone

234247249 (Professional)

Addresses

Department od Medical Sciences, University of Aveiro, Agras do Crasto, 3810-193, Aveiro, Aveiro, Portugal (Professional)

Websites

https://www.ua.pt/ibimed/ (Scholar)

Knowledge fields

Medical and Health Sciences - Basic Medicine - Human Genetics
Natural sciences - Biological Sciences - Genetics and Heredity

Education

	Degree	Classification
1994/09/01 - 2000/03/24 Concluded	Biomedical Sciences (Doutoramento) Major in Applied Physiology Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal "Estudo dos Mecanismos de Calcificação de um Modelo Bivalve" (THESIS/DISSERTATION)	approved by unanimous vote
2000 Concluded	Gabriela Moura (Doutoramento) Major in Outra:Sem especialidade Universidade do Porto, Portugal "Estudo de Mecanismos de Calcificação em Moluscos" (THESIS/DISSERTATION)
1988/09/01 - 1992/07/31 Concluded	Ciências do Meio Aquático (Licenciatura) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	17

Affiliation

Science

	Category Host institution	Employer
2016 - Current	Principal Investigator (Research)	Universidade de Aveiro Instituto de Biomedicina, Portugal
	Universidade de Aveiro Instituto de Biomedicina, Portugal
2014 - 2015	Contracted Researcher (Research)	Universidade de Aveiro CICECO, Portugal
	Universidade de Aveiro CICECO, Portugal
2008 - 2014	Contracted Researcher (Research)	Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
	Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal

Teaching in Higher Education

	Category Host institution	Employer
2016 - Current	Assistant Professor (University Teacher)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2015 - 2019	Assistant Professor (University Teacher)	Universidade de Aveiro, Portugal

2015 - 2016	Invited Assistant Professor (University Teacher)	Universidade de Aveiro - Secção Autónoma das Ciências da Saúde, Portugal
	Universidade de Aveiro - Secção Autónoma das Ciências da Saúde, Portugal
2013 - 2015	Invited Assistant Professor (University Teacher)	Universidade de Aveiro, Portugal

2008 - 2010	Invited Assistant Professor (University Teacher)	Universidade de Aveiro - Secção Autónoma das Ciências da Saúde, Portugal
	Universidade de Aveiro - Secção Autónoma das Ciências da Saúde, Portugal
2005 - 2007	Invited Assistant Professor (University Teacher)	Universidade de Aveiro Departamento de Biologia, Portugal
	Universidade de Aveiro Departamento de Biologia, Portugal
2004 - 2005	Invited Assistant (Polytechnic Teacher)	Instituto Politécnico do Porto Escola Superior de Saúde, Portugal
	Instituto Politécnico do Porto Escola Superior de Saúde, Portugal

Projects

Grant

	Designation	Funders
2022/11/01 - 2026/09/30	European Genomic Data Infrastructure (GDI) project 101081813 Researcher Universidade de Aveiro Departamento de Ciências Médicas, Portugal	Ongoing
2022/10/01 - 2025/09/30	EPIBOOST: BOOSting excellence in environmental EPIgenetics 101078991 Researcher Universidade de Aveiro, Portugal	Ongoing
2022/04/01 - 2023/06/30	COVID2123: Optimization of iBiMED-Aveiro diagnostic, screening and surveillance platforms for genetic variants of COVID-19 CENTRO-01-01D2-FEDER-000001 Principal investigator Universidade de Aveiro Instituto de Biomedicina, Portugal	Comissão de Coordenação e Desenvolvimento Regional do Centro Ongoing

Contract

	Designation	Funders
2023/02/01 - 2026/01/31	Roles of the Candida albicans variome in its interaction with the human host 2022.01376.PTDC Principal investigator Universidade de Aveiro, Portugal Universidade de Coimbra, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2022/01/01 - 2024/12/31	Finding new genetic markers of antifungal resistance in the fungal pathogen Candida albicans PTDC/BIA-MIC/1141/2021 Researcher Universidade de Aveiro, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2021/07/01 - 2023/06/30	Building Capacity in the Centre Region for Precision Medicine, Based on Genomics CENTRO-08-5864-FSE-000039 Co-Principal Investigator (Co-PI)	Comissão de Coordenação e Desenvolvimento Regional do Centro Ongoing
2018/07/01 - 2022/06/30	Identification and quantification of protein biosynthesis errors at the proteome scale. PTDC/BIA-MIB/31238/2017 Researcher Universidade de Aveiro, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2018/06/01 - 2022/05/31	Impact of wide-spread proteome aggregation through aging in mammals and implications for the development of age-related diseases. PTDC/BTM-TEC/29843/2017 Researcher Universidade de Aveiro, Portugal Universidade do Minho, Portugal Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal Universidade de Coimbra Centro de Inovação em Biomedicina e Biotecnologia, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2018/06/01 - 2022/02/28	MIStranslation: a novel trigger of genome instability In Cancer PTDC/MED-ONC/28834/2017 Researcher Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal Universidade de Aveiro, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2020/10/15 - 2021/10/14	SIARC-Soluções integradas para a automação do rastreio de alto débito da COVID-19 CENTRO-01-02B7-FEDER-069749 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Associação para a Inovação e Desenvolvimento da FCT Concluded
2018/07/05 - 2021/07/04	CANCYL: Exploring the genome of the emergent pathogenic fungus, Candida rugosa PTDC/BIA-MIC/31849/2017 Principal investigator Universidade de Aveiro Instituto de Biomedicina, Portugal Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2018/07/01 - 2021/06/30	Pulmonary rehabilitation innovation and microbiota in exacerbations of COPD PTDC/SAU-SER/28806/2017 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2018/06/01 - 2021/05/31	GoBack – New therapeutics targets for spinal cord regeneration PTDC/CVT-CVT/32261/2017 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2018/09/01 - 2020/09/01	MEDISIS : Promoção do envolvimento dos atores chave da Região Centro para a transferência de conhecimento e criação de novas parcerias nas áreas da Medicina de Sistemas CENTRO-01-0246-FEDER-000018 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Comissão de Coordenação e Desenvolvimento Regional do Centro Ongoing
2020/05/04 - 2020/08/03	Very high throughput low cost test for the massification of SarS-CoV-2 screening FACC 20/7/89-Projeto031 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2016/07/01 - 2020/06/30	MEDPERSYST: Synaptic networks and Personalized Medicine Approaches to Understand Neurobehavioural Diseases Accross the Lifespan SAICTPAC/0010/2015 Researcher Universidade de Coimbra Instituto de Ciências Nucleares Aplicadas à Saúde, Portugal Universidade de Coimbra, Portugal FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal Universidade de Aveiro, Portugal Universidade do Minho, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2016/07/01 - 2020/06/30	NetDiamond: NEw Targets in DIAstolic heart failure: from coMOrbidities to persoNalizeD medicine SAICTPAC/0047/2015 Researcher Universidade do Porto Faculdade de Medicina, Portugal Universidade Nova de Lisboa Faculdade de Ciências Médicas, Portugal Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal Instituto Nacional de Engenharia Biomédica, Portugal Instituto de Biologia Experimental e Tecnológica, Portugal Universidade de Aveiro, Portugal Instituto de Biologia Molecular e Celular, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2017/06/01 - 2020/05/31	GenomePT: National Facility for genome sequencing and analysis POCI/01/0145/FEDER/022184 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Fundação para a Ciência e a Tecnologia Ongoing
2017 - 2020	Protein aggregation through aging - pAGE CENTRO-01-0145-FEDER-000003 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal	Comissão de Coordenação e Desenvolvimento Regional do Centro Ongoing
2016/02 - 2019/01	GENetic and clinIcAL markers in COPD trajectory PTDC/DTPPIC/ 2284/2014 Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2016 - 2019	GENIAL: Genetic and clinical markers in COPD trajectory PTCD/DTP-PIC/2284/2014 PTDC/DTP-PIC/2284/2014 Researcher Universidade de Aveiro Instituto de Biomedicina, Portugal Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2011/01/01 - 2014/06/30	DECODING: Large scale approaches to unravel genome decoding rules PTDC/BIA-GEN/110383/2009 Principal investigator Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2013 - 2014	Projeto Estratégico – LA 17 – 2013-2014 PeST-c/mar/la0017/2013 Researcher Universidade de Aveiro CICECO, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2010/06/01 - 2013/11/30	Reversion of a genetic code alteration in the human pathogen Candida albicans PTDC/BIA-MIC/099826/2008 info:eu-repo/grantAgreement/FCT/5876-PPCDTI/99826/PT Researcher Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2009/11/01 - 2013	SYBARIS - Finding biomarkers of anti-microbial drug resistance via a systems biology analysis of fungal pathogen interactions with the human immune system info:eu-repo/grantAgreement/EC/FP7/242220/EU Researcher Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2011/01/01 - 2012/12/31	Projecto Estratégico - LA 17 - 2011-2012 PEst-C/MAR/LA0017/2011 Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2008/01/01 - 2012/12/31	Molecular biology studies CONT_DOUT/52/UA/1292/6194/ 35/2006 Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2008/05/02 - 2012/01/31	Developing new tools for studying mRNA mistranslation PTDC/BIA-BCM/72251/2006 info:eu-repo/grantAgreement/FCT/5876-PPCDTI/72251/PT Principal investigator Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2009 - 2012	MEPHITIS - Targetting protein synthesis in the apicoplast and cytoplasm of Plasmodium MEPHITIS-FP7-HEALTH-2009-223024 Researcher Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2009/01/01 - 2011/12/31	Implementation of a Nacional Facility for DNA Microarrays: Phase II PTDC/BIA-BCM/64745/2006 Researcher Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2008/01/01 - 2011/09/30	Assessing the combined effects of chemical stressors and UV radiation on Daphnia magna PTDC/AMB/74346/2006 info:eu-repo/grantAgreement/FCT/5876-PPCDTI/74346/PT Researcher Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2005 - 2009	mRNA mistranslation in biological processes RGP0045/2005 Researcher Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Human Frontier Science Program Concluded
2007/06/01 - 2008/11/30	New statistical methodologies for analysis DNA microarrays data PTDC/MAT/72974/2006 Universidade de Aveiro, Portugal Universidade de Aveiro Centro de Investigação e Desenvolvimento em Matemática e Aplicações, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2005/09/01 - 2008	Impact of mRNA mistranslation on cell degeneration and evolution info:eu-repo/grantAgreement/FCT/POCI/55476/PT Researcher Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2005/06/01 - 2008	Determination of the 3D-structure of the translational factors that mediate a genetic code change in Candida albicans info:eu-repo/grantAgreement/FCT/POCI/55472/PT Researcher Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2002/05/01 - 2007/12/31	STUDY OF CODON CONTEXT IN THE YEAST GENOME SFRH/BPD/7195/2001 Universidade de Aveiro, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2002/09/01 - 2005	Developing new tools for genome analysis info:eu-repo/grantAgreement/FCT/POCI/39030/PT Post-doc Fellow Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
1999 - 2000	Molecular characterization of the non-standard mechanism of translation of the pathological yeast Candida albicans PRAXIS/P/SAU/14123/1998 Post-doc Fellow Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
1996 - 1998	Biomineralization model in Anodonta cygnea PRAXIS/2/2.1/BIA/172/94 PhD Student Fellow Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	Fundação para a Ciência e a Tecnologia Concluded
1992 - 1995	Biomineralization in a freshwater bivalve STRDA/C/CEN/279/92 PhD Student Fellow Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	Fundação para a Ciência e a Tecnologia Concluded

Outputs

Publications

Book	Fernando Regateiro; Sofia L. Marques; Sonya Neto; Miguel Pinheiro; João Manuel Santos de Miranda; Manuel Santos; Gabriela Moura. Sequenciação de DNA – NGS: Manual de Boas Práticas. 2023. 10.14195/978-989-26-2525-6 Regateiro, Fernando (coord.); Marques, Sofia; Neto, Sonya; Pinheiro, Miguel; Santos, Manuel; Moura, Gabriela. Sequenciação de DNA – NGS manual de boas práticas. Imprensa da Universidade de Coimbra. 2023. 10.14195/978-989-26-2525-6
Book chapter	Ferreira, Susana; Afreixo, Vera; Moura, Gabriela; Tavares, Ana Helena. "Study of the epigenetic signals in the human genome". Springer, 2017. 10.1007/978-3-319-60816-7_26 Moura, G.; Gomes, A.C.; Santos, Manuel A.S.. "The Genetic Code of the Candida CTG Clade". In Candida and Candidiasis, Second Edition, edited by Richard A. Calderone; C.J. Clancy, 45-55. Washington: American Society of Microbiology, 2012. 10.1128/9781555817176.ch4 Moura, G.; Lima-Costa, T.; Carreto, L.; Gomes, A.C; Santos, Manuel A.S.. "Molecular evolution of the Candida genetic code". In Candida: comparative and functional genomics, edited by Christophe d'Enfert; Berhard Hube, 135-149. United Kingdom: Caister Academic Press, 2007. Published Moura, Gabriela; Pinheiro, Miguel; Freitas, Adelaide Valente; Oliveira, José Luís; Santos, Manuel A. S.. "Computational and statistical methodologies for ORFeome primary structure analysis". In Comparative Genomics, edited by Nick Bergman, 449-462. United States: Humana Press, 2007. Published • https://doi.org/10.1007/978-1-59745-514-5_28 Adelaide Valente Freitas; Miguel Pinheiro; José Luis Oliveira; Moura, Gabriela; Santos, Manuel. "A new limiting distribution for a statistical test for the homogeneity of two multinomial populations". Wolfgang Urfer M. Antónia Amaral Turkman, 2005.
Book review	Lozano-Velasco, Estefania; Inácio, José Manuel; Sousa, Inês; Guimarães, Ana Rita; Franco, Diego; Moura, Gabriela; Belo, José António. "miRNAs in Heart Development and Disease". http://hdl.handle.net/10362/163916. https://doi.org/10.3390/ijms25031673
Conference abstract	Marçalo, Rui; Rodrigues, Guilherme; Pinheiro, Miguel; Neto, Sonya; Marques, Sofia L.; Simão, Paula; Martins, Vitória; et al. "Genetic predisposition for low functional status in COPD". 2023. 10.1183/13993003.congress-2023.pa1835 Rodrigues, Guilherme; Marçalo, Rui; Moura, Gabriela; Marques, Alda; Afreixo, Vera. "Decoding the genetic architecture behind disease heterogeneity: a genome-wide association study and cluster analysis In COPD". Paper presented in 5th Statistics on Health Decision Making, 2023. Published • 10.34624/jshd.v5i2.32432 Marçalo, Rui; Rodrigues, Guilherme; Miguel Pinheiro; Neto, Sonya; Marques, Sofia L.; Simão, Paula; Martins, Vitória; et al. "The Influence of Genetic Factors on Reduced Functional Status in COPD". Paper presented in VI Post-Graduate Symposium in Biomedicine, 2023. Published • 10.48528/ym5m-v564 Marçalo, Rui; Marques, Alda; Moura, Gabriela. "Decoding the genetic architecture of reduced functional status in COPD: Insights from cluster analysis and genome-wide association study". Paper presented in Research Summit 2023, University of Aveiro, 2023. Published • 10.48528/nd5m-mk87 Neves, Vasco; Sonya Neto; Marçalo, Rui; Thaís Córdova; Manuel A. S. Santos; Moura, Gabriela. "GWAS and PRS studies of human diseases: perspectives and limitations". Paper presented in III International Meeting of the Portuguese Society of Genetics, Évora, 2023. In press Sonya Neto; Reis, Andreia; Pinheiro, Miguel; Santos, N.; Rodrigues, Ana J.; Neves, Vasco; Sousa, Nuno; Manuel Santos; Moura, Gabriela. "A genomic approach to explore the mechanisms of cognitive aging". Paper presented in III International Meeting of the Portuguese Society of Genetics, 2023. In press Marçalo, Rui; Córdova, Thaís; Neves, Vasco; Pinheiro, Miguel; Santos, Manuel António da Silva; Simão, Paula; Andrade, Lília; et al. "COPD: can genetic background inform about disease heterogeneity?". Paper presented in European Respiratory Society (ERS) International Congress 2022, 2022. Published Marçalo, Rui; Rodrigues, Guilherme; Marques, Alda; Moura, Gabriela. "Exploring functional status in COPD: A combination of statistical and genomic approaches towards understanding functional status in COPD". Paper presented in Scientific Advisory Board Meeting, Institute of Biomedicine (iBiMED), 2022. Published Marçalo, Rui; Marques, Alda; Moura, Gabriela. "Impact of genetic background on the poor prognosis of people with COPD upon COVID-19 infection and high heterogeneity among worldwide populations". Paper presented in Research Summit 2022, University Aveiro, 2022. Published
Conference paper	Rodrigues, Guilherme; Marçalo, Rui; Moura, Gabriela; Afreixo, Vera; Marques, Alda. "Decoding The Genetic Architecture Behind Disease Heterogeneity: A Genome-Wide Association Study And Cluster Analysis In COPD". 2023. 10.34624/jshd.v5i2.32432 Marçalo, Rui; Rodrigues, Guilherme; Pinheiro, Miguel; Neto, Sonya; Marques, Sofia L.; Simão, Paula; Martins, Vitória; et al. "Genetic predisposition for low functional status in COPD". 2023. 10.1183/13993003.congress-2023.PA1835 Carvalho, Maria J.; Pinheiro, Miguel; Reis, Andreia; Bezerra, Ana Rita; Santos, Manuel A. S.; Moura, Gabriela. "Unveiling the genome of Limtongozyma cylindracea". 2022. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "Genetic risk for covid-19 outcomes in COPD". 2021. 10.1183/13993003.congress-2021.pa670 Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "The worldwide covid-19 genetic risk scenario". 2021. 10.1183/13993003.congress-2021.pa675 Reis, Andreia; Pinheiro, Miguel; Carvalho, Maria João; Neto, Sonya; Ferreira, Margarida; Enes, Vera; Moura, Gabriela. "The genomics facility of iBiMED: bioinformatics lab". 2021. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "Genetic risk for covid-19 outcomes in COPD". 2021. 10.1183/13993003.congress-2021.PA670 Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "The worldwide covid-19 genetic risk scenario". 2021. 10.1183/13993003.congress-2021.PA675 Castro, Daniel; Enes, Vera; Moura, Gabriela; Marques, Alda. "Exploring the clinics of chronic obstructive pulmonary disease using multiple correspondence analysis". Paper presented in 2nd Statistics on Health Decision Making: clinical trials, 2020. 10.34624/jshd.v2i2.19527 Freitas, Adelaide; Cabral, Jorge; Iutis, Adela; Antão, Joana; Marques, Sérgio; Costa, Tiago; Moura, Gabriela. "An exploratory analysis of aging gene expression levels using gene functions’ combinations". 2020. https://doi.org/10.34624/jshd.v2i2.19452 Silva, Tatiana; Machado, Filipa; Moura, Gabriela; Marques, Alda. "Genome-wide association study in chronic obstructive pulmonary disease (COPD): associations between genetics and clinical measures". 2019. 10.1097/MD.0000000000015772 Ferreira, Susana; Afreixo, Vera; Moura, Gabriela; Tavares, Ana H. M. P.. "Study of the Epigenetic Signals in the Human Genome". 2017. 10.1007/978-3-319-60816-7_26 Farkas, Z.; Bodi, Z.; Nevozhay, D.; Kalapis, D.; Lazar, V.; Csoergo, B.; Nyerges, A.; et al. "Phenotypic heterogeneity guides adaptive evolution". 2015. Published Weil, T.; Santamaria, R.; Lee, W.; Rung, J.; Tocci, N.; Simões, J.; Bezerra, A.R.; et al. "A genetic code alteration accelerates the acquisition of antifungal drug resistance in Candida albicans". Paper presented in A genetic code alteration accelerates the acquisition of antifungal drug resistance in Candida albicans, 2015. Published Lousado, J.P.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel. "Análise da evolução de repetições de codões e de aminoácidos em dados biológicos". Paper presented in CISTI 2010 – 5th Iberian Conference on Information Systems and Technologies, 2010. Published Lousado, J.P.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel. "An application for study tandem repeats in orthologous genes". 2010. Lousado, José; Oliveira, José; Moura, Gabriela; Santos, Manuel. "Analysing the Evolution of Repetitive Strands in Genomes". 2009. Pinheiro, M.; Oliveira, J.L.; Moura, G.R.; Santos, M.A.S.. "Studying the evolution of codon context in conserved gene sequences". Paper presented in BIOTECHNO, 2008. 10.1109/BIOTECHNO.2008.18 Lousado, José; Oliveira, José; Moura, Gabriela; Santos, Manuel; Lousado, J.P.; Moura, G.R.; Santos, M.A.S.; Oliveira, J.L.. "GeneSplit - Uma Aplicação para o Estudo de Associações de Codões e de Aminoácidos em ORFeomas". 2008. Lousado, José; Oliveira, José; Moura, Gabriela; Santos, Manuel. "Exploiting Codon-Triplets Association for Genome Primary Structure Analysis". 2008. Duarte, J.; Freitas, A.; Pinheiro, M.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel. "ISA: um algoritmo de biclassificação?". Paper presented in XIV Congresso da Sociedade Portuguesa de Estatística, 2007. Published Freitas, A.; Duarte, J.; Pinheiro, M.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel. "Homo sapiens vs Pan troglodytes: quão diferentes são?". Paper presented in XIV Congresso da Sociedade Portuguesa de Estatística, 2007. Published Freitas, A.; Pinheiro, M.; Afreixo, V.; Duarte, J.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel; et al. "A median-based iterative signature algorithm". Paper presented in 56th session of the International Statistical Institute, 2007. Published V. Afreixo; A. Freitas; M. Pinheiro; J. L. Oliveira; Moura, Gabriela; Santos, Manuel. "Exploiting a Biclustering algorithm in ORFeome analysis". Paper presented in 2007 VLDB Workshop on Data Mining in Bioinformatics, 2007. Published Freitas, A.; Pinheiro, M.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel; Adelaide Valente Freitas; Miguel Pinheiro; José Luis Oliveira. "A new limiting distribution for the statistic test for the homogeneity of two multinomial populations". Paper presented in Workshop on Statistics in Genomics and Proteomics, 2005. Published Santos, Manuel; Beltrão, P.; Almeida, R.; Massey, S.; Garey, J.; Moura, Gabriela. "Comparative evolutionary genomics of CUG reassignment in Candida species". Paper presented in XXIst International Conference on the Yeast Genetics and Molecular Biology, 2003. Published Miranda, I.; Moura, Gabriela; Gomes, A.C.; Santos, Manuel. "Codon usage in Candida albicans". 2001. Published Moura, Gabriela; Miranda, I.; Gomes, A.C.; Santos, Manuel. "Non-standard translation and genetic code ambiguity in Candida albicans". 2001.
Conference poster	Bosse, Frank; Correia, Patrícia D.; Estrada, Veronica; Reis, Andreia; Ramos, Sara; Moura, Gabriela; Müller, Hans Werner; Vieira, Sandra Isabel. "Comparative Expression Analysis Reveals Cell Type-Specific Neuronal Injury-Responses.". Paper presented in Glia 2023, 2023. Correia, Patrícia D.; Estrada, Veronica; Reis, Andreia; Ramos, Sara; Marques, Sofia; Arinto, Patrícia; Lopes, Fátima; et al. "Central versus Peripheral nervous injuries: What are the transcriptomic differences and similarities, 24 hours after lesion?". Paper presented in FENs-Forum 2022, Paris, 2022. Correia, Patrícia D.; Estrada, Veronica; Reis, Andreia; Ramos, Sara; Arinto, Patrícia; Lopes, Fátima; Moura, Gabriela; et al. "Early transcriptomic signatures of sensory and motor neurons, after central or peripheral nerve injury.". Paper presented in 2nd International Meeting of Portuguese Spinal Cord Injury Researchers, 2022. Carvalho, Maria J.; Pinheiro, Miguel; Reis, Andreia; Bezerra, Ana Rita; Santos, Manuel A. S.; Moura, Gabriela. "Unveiling the genome of Limtongozyma cylindracea". 2022. Guimarães, Ana R.; Ana Rita Macedo Bezerra; Reis, Andreia; Moura, Gabriela; Manuel António da Silva Santos; Pinheiro, Miguel. "PHASEfilter - filtering heterozygous variants from phased genomes". Paper presented in XI Bioinformatics Open Days, 2022. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "COPD as a COVID-19 risk group: Is genetic background the reason?". Paper presented in GenomePT Symposium 2021, 2021. MJ Carvalho; Moura, Gabriela; Miguel Pinheiro. Corresponding author: MJ Carvalho. "De novo assembly and annotation of the Candida cylindracea genome". Paper presented in Oxford Nanopore Technologies London Calling 2021, 2021. Direito, Inês; Monteiro, Liliana; Melo, Tânia; Figueira, Daniela; Lobo, João; Enes, V.; Moura, Gabriela; et al. "Protein aggregation and hormone-related cancers: a novel approach to improve diagnosis and overcome endocrine therapy resistance?". Paper presented in Breast Cancer Symposium, 2021. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana João; Sousa, Nuno; Santos, Manuel António da Silva; Simão, Paula; et al. "Genetic risk for COVID-19 outcomes in COPD and differences among worldwide populations". Paper presented in Bioinformatic Open Days, 2021. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "Genetic risk for covid-19 outcomes in COPD". 2021. 10.1183/13993003.congress-2021.PA670 Reis, Andreia; Pinheiro, Miguel; Carvalho, Maria João; Neto, Sonya; Ferreira, Margarida; Enes, Vera; Moura, Gabriela. "The genomics facility of iBiMED: bioinformatics lab". 2021. Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana; Sousa, Nuno; Santos, Manuel; Simão, Paula; et al. "The worldwide covid-19 genetic risk scenario". 2021. 10.1183/13993003.congress-2021.PA675 Guimarães, Ana R.; Pinheiro, Miguel; Reis, Andreia; Moura, Gabriela; Ana Rita Macedo Bezerra; Manuel António da Silva Santos. "Adaptation to codon reassignment induces major genomic and transcriptomic alterations in S. cerevisiae". Paper presented in GenomePT Symposium, 2021. Moura, G.. "Exploring the clinics of chronic obstructive pulmonary disease using multiple correspondence analysis". Paper presented in 2nd Statistics on Health Decision Making: clinical trials, 2020. Freitas, Adelaide; Cabral, Jorge; Iutis, Adela; Antão, Joana; Marques, Sérgio; Costa, Tiago; Moura, Gabriela. ", An exploratory analysis of aging gene expression levels using gene functions’ combinations: As expected the heart has age!". Paper presented in 2nd meeting in Statistics on Health Decision Making: clinical trials, 2020. Direito, Inês; Monteiro, Liliana; Enes, V.; Lobo, João; Henrique, Rui; Jerónimo, Carmen; Amado, Francisco; et al. "Breast cancer endocrine resistance is associated to a dysregulation of protein quality control". Paper presented in EACR-AACR-ASPIC Conference: Tumor Microenvironment, 2020. Correia, Patrícia D.; Estrada, Veronica; Reis, Andreia; Ramos, Sara; Moura, Gabriela; Müller, Hans Werner; Bosse, Frank; Vieira, Sandra. "PNI versus SCI: the acute neuronal-specific transcriptional responses after lesion". 2020. Reis, Andreia; Coimbra, Rita; Pinheiro, Miguel; Enes, Vera; Ferreira, Margarida; Neto, Sonya; Moura, Gabriela. "Multiomics approaches to study ageing and age-related diseases in research model organisms and in humans". 2019. Coimbra, Rita; Pinheiro, Miguel; Reis, Andreia; Bezerra, Ana Rita; Oliveira, José Luís; Souciet, Jean-Luc; Santos, Manuel A. S.; Moura, Gabriela. "The genome of Candida cylindracea to study the role of the translational machinery on gene evolution". 2018. Coimbra, Rita; Pinheiro, Miguel; Reis, Andreia; Bezerra, Ana Rita; Oliveira, José Luís; Souciet, Jean-Luc; Santos, Manuel A. S.; Moura, Gabriela. "The impact of a codon reassignment event on the evolution of the yeast C.cylindracea". 2018. Melro, Hélder; Moura, Gabriela; Pires De Dias Marques, Alda Sofia; Marques, Alda. "Genetic profile and patient-reported outcomes (PROs) in COPD: a systematic review". 2017. 10.1183/1393003.congress-2017.pa4713 Fernandes, J.; Frommlet, Jörg C.; Moura, G.; Santos, M. A. S.. "Testing of a ß–galactosidase reporter system for the in vivo study of codon context effects on translation". Paper presented in XXXVI Jornadas Portuguesas de Genética, 2011. Fernandes, J.; Frommlet, J.; Moura, Gabriela; Santos, Manuel. "Testing of a beta-galactosidase reporter system for the in vivo study of codon context effects on translation". Paper presented in XXXVI Jornadas Portuguesas de Genética, 2011. Moura, G.; Pinheiro, M.; Freitas, A.; Oliveira, J. L.; Frommlet, Jörg C.; Santos, M. A. S.. "Codon-pair context biases are conserved in coding sequences of bacteria, archaea and eukaryotes". Paper presented in XVII Congresso Nacional de Bioquímica, 2010. Gomes, A.C.; Moura, Gabriela; Farabaugh, P.; Santos, Manuel. "The impact of environmental stress on genome translational fidelity". Paper presented in XVII Congresso Nacional de Bioquímica, 2010. Paredes, J.A.; Carreto, L.; Costa, T.L.; Moura, Gabriela; Santos, Manuel. "The transcriptional responses to genome mistranslation in yeast". Paper presented in XXXV Jornadas Portuguesas de Genética, 2010. P. Gaspar; J.L. Oliveira; J. Frommlet; Moura, Gabriela; Santos, Manuel. "A gene multi-optimization tools as novel approach to heterologous expression". Paper presented in 14th International Conference on Research in Computational Molecular Biology (RECOMB 2010), 2010. Gomes, A.C.; Moura, Gabriela; Farabaugh, P.; Santos, Manuel. "The impact of environmental stress on the accuracy of tRNA decoding". Paper presented in 23rd tRNA Workshop (tRNA 2010), 2010. J. Frommlet; P. Gaspar; M. Pinheiro; J.L. Oliveira; A.C. Gomes; Moura, Gabriela; Santos, Manuel. "Integrating tRNA abundance, codon-usage, codon-context and functional rare codon data in de novo synthesis of Plasmodium falciparum genes for optimal expression in Escherichia coli". Paper presented in 23rd tRNA Workshop (tRNA 2010), 2010. Gaspar, P.; Oliveira, J. L.; Frommlet, Jörg C.; Moura, G.; Santos, M. A. S.. "A gene multi-optimization tool as novel approach to hetelogeneous expression". Paper presented in 14th International Conference on Research in Computational Molecular Biology (RECOMB 2010), 2010. Gomes, C.; Moura, Gabriela; Oliveira, J.L.; Pinheiro, M.; Farabaugh, P.J.; Kramer, E.; Santos, Manuel. "The role of biased codon-context on mRNA decoding error in vivo in yeast". Paper presented in Translational Control, Cold Spring Harbor Laboratory, 2008. Moura, Gabriela; Pinheiro, M.; Freitas, A.; Oliveira, J.L.; Santos, Manuel. "Codon context rules governing mRNA decoding accuracy and gene evolution". Paper presented in HFSP – 8th Annual Awardees Meeting, 2008. Gomes, C.; Moura, Gabriela; Gomes, A.C.; Oliveira, J.L.; Pinheiro, M.; Freitas, A.; Santos, Manuel. "The role of codon-context on mRNA decoding error in vivo in yeast". Paper presented in EMBO Conference on Protein Synthesis and Translational Control, 2007. Moura, Gabriela; M. Pinheiro; C. Gomes; A. Freitas; J.L. Oliveira; Santos, Manuel. "Large scale comparative codon context analysis unveils novel rules governing gene evolution". Paper presented in XV Congresso Nacional de Bioquímica (CNB2006), 2006. M. Pinheiro; Moura, Gabriela; A. Freitas; Santos, Manuel; J.L. Oliveira. "A bioinformatics system to analyze sequences at a genomic scale". Paper presented in XV Congresso Nacional de Bioquímica (CNB2006), 2006. A. Freitas; L. Ferreira; J. Duarte; M. Pinheiro; J.L. Oliveira; Moura, Gabriela; Santos, Manuel. "Homo sapiens vs Pan troglodytes: how different are they?". Paper presented in XV Congresso Nacional de Bioquímica (CNB2006), 2006. Lousado, José; Moura, Gabriela; Pinheiro, Miguel; Oliveira, José; Santos, Manuel. "Large scale comparative genomics of codon context". 2006. Santos, Manuel; Beltrão, P.; Almeida, R.; Rocha, R.; Moura, Gabriela. "A genetic code change had a major impact on the evolution of the Candida albicans genome". Paper presented in 21th International tRNA Workshop (tRNA-2005), 2005. Moura, Gabriela; Miguel Pinheiro; Joel Arrais; Adelaide Valente; José Luís Oliveira; Santos, Manuel. "Comparative analysis of codon context biases in yeast genomes". Paper presented in ESF-EMBO Symposium on Comparative Genomics of Eukaryotic Microorganisms, 2005. M. Pinheiro; V. Afreixo; Moura, Gabriela; A. Freitas; Santos, Manuel; J. L. Oliveira. "Bioinformation system for unveil general rules of codon context". Paper presented in XIV Congresso Nacional de Bioquímica, 2004. Moura, Gabriela; Miguel Pinheiro; Vera Afreixo; Adelaide Valente; José Luís Oliveira; Santos, Manuel. "Genome scale codon context analysis for Saccharomyces cerevisiae and Candida albicans". Paper presented in XII Jornadas de Biologia de Leveduras Prof. Nicolau van Uden, 2004. Santos, Manuel; R.M. Rocha; Moura, Gabriela; R. M. Silva. "A novel and critical role for a genetic code change in the evolution of the genus Candida". Paper presented in ASM Conference: Candida and Candidiasis (7th), 2004. Moura, Gabriela; M. Pinheiro; V. Afreixo; A. Valente; J. L. Oliveira; Santos, Manuel. "Comparative codon context analysis at a genomic scale defines new mRNA decoding rules". Paper presented in Translational Control Meeting, 2004. M. Pinheiro; V. Afreixo; Moura, Gabriela; G. Dias; A.S. Pereira; A. Valente; Santos, Manuel; J. L. Oliveira. "Bioinformation system and statistical methodologies for gene primary structure analysis". Paper presented in EuroMISE 2004, 2004. Moura, Gabriela; Steve Massey; James R. Garey; Pedro Beltrão; Ricardo Almeida; Mick F. Tuite; Santos, Manuel. "Comparative genomics unravels the evolutionary pathway of a genetic code change in Candida spp.". Paper presented in ESF Programme in Functional Genomics: 1st European Conference (ESFFG'2003), 2003. José L. Oliveira; Miguel Pinheiro; Gaspar Dias; Moura, Gabriela; Vera Afreixo; Adelaide Valente; António S. Pereira; Santos, Manuel. "New software tools for comparative genomics". Paper presented in ESF Programme in Functional Genomics: 1st European Conference (ESFFG'2003), 2003. Moura, Gabriela; Steven, M.; James, G.; Pedro, B.; Ricardo, A.; Mick, F. T.; Santos, Manuel. "Decoding and evolution of the CUG codon in Candida spp.". Paper presented in XIII Congresso Nacional de Bioquímica, 2002. Moura, Gabriela; I. Miranda; C. Gomes; Santos, Manuel; Miranda, I.; Gomes, A.C.. "Non-standard translation and genetic code ambiguity in C. albicans". Paper presented in 27th Meeting of the FEBS, 2001. Moura, Gabriela; Isabel Miranda; Santos, Manuel. "Molecular characterization of non-standard translation in Candida albicans". Paper presented in XII Congresso Nacional de Bioquímica, 2000.
Journal article	Inês Correia; Carla Oliveira; Andreia Reis; Ana Rita Guimarães; Susana Aveiro; Pedro Domingues; Ana Rita Bezerra; et al. "A Proteogenomic Pipeline for the Analysis of Protein Biosynthesis Errors in the Human Pathogen Candida albicans". Molecular & Cellular Proteomics (2024): https://doi.org/10.1016/j.mcpro.2024.100818. 10.1016/j.mcpro.2024.100818 Regateiro, Fernando J.; Silva, Henriqueta; Lemos, Manuel C.; Moura, Gabriela; Torres, Pedro; Pereira, André Dias; Dias, Luís; et al. "Promoting advanced medical services in the framework of 3PM—a proof-of-concept by the “Centro” Region of Portugal". EPMA Journal 15 1 (2024): 135-148. http://dx.doi.org/10.1007/s13167-024-00353-9. 10.1007/s13167-024-00353-9 Estefania Lozano-Velasco; José Manuel Inácio; Inês Sousa; Ana Rita Guimarães; Diego Franco; Gabriela Moura; José António Belo. "miRNAs in Heart Development and Disease". International Journal of Molecular Sciences (2024): https://doi.org/10.3390/ijms25031673. 10.3390/ijms25031673 Lozano-Velasco, Estefania; Inácio, José Manuel; Sousa, Inês; Guimarães, Ana Rita; Franco, Diego; Moura, Gabriela; Belo, José António. "miRNAs in Heart Development and Disease". (2024): http://hdl.handle.net/10773/41271. 10.3390/ijms25031673 Regateiro, Fernando J.; Silva, Henriqueta; Lemos, Manuel C.; Moura, Gabriela; Torres, Pedro; Pereira, André Dias; Dias, Luís; et al. "Promoting advanced medical services in the framework of 3PM: a proof-of-concept by the "Centro" Region of Portugal". (2024): http://hdl.handle.net/10773/41273. 10.1007/s13167-024-00353-9 Regateiro, Fernando J; Silva, Henriqueta Alexandra Mendes Breda Lobo Coimbra; Lemos, Manuel C.; Moura, Gabriela; Torres, Pedro Marcelo Amado Garcia da Rocha; Pereira, André Gonçalo Dias; Dias, Luis C.; et al. "Promoting advanced medical services in the framework of 3PM-a proof-of-concept by the "Centro" Region of Portugal". (2024): https://hdl.handle.net/10316/115032. https://doi.org/10.1007/s13167-024-00353-9 Afreixo, Vera; Tavares, Ana Helena; Enes, Vera; Pinheiro, Miguel; Rodrigues, Leonor; Moura, Gabriela. "Stable variable selection method with shrinkage regression applied to the selection of genetic variants associated with Alzheimer’s Disease". (2024): http://hdl.handle.net/10773/41173. 10.3390/app14062572 Ana Rita R. Silva; Patrícia V. Silva; Ana Raquel Soares; M. Nazaret González-Alcaraz; Cornelis A. M. van Gestel; Dick Roelofs; Gabriela Moura; Amadeu M. V. M. Soares; Susana Loureiro. "Daphnia magna Multigeneration Exposure to Carbendazim: Gene Transcription Responses". Toxics (2023): https://doi.org/10.3390/toxics11110918. 10.3390/toxics11110918 Jose M Inacio; Fernando Cristo; Miguel Pinheiro; Francisco Vasques-Nóvoa; Francisca Saraiva; Mafalda Marques Nunes; Graça Rosas; et al. "Myocardial RNA Sequencing Reveals New Potential Therapeutic Targets in Heart Failure with Preserved Ejection Fraction". Biomedicines (2023): https://www.mdpi.com/2227-9059/11/8/2131. 10.3390/biomedicines11082131 Inácio, José M.; Cristo, Fernando; Pinheiro, Miguel; Vasques-Nóvoa, Francisco; Saraiva, Francisca; Nunes, Mafalda M.; Rosas, Graça; et al. "Myocardial RNA sequencing reveals new potential therapeutic targets in heart failure with preserved ejection fraction". (2023): http://hdl.handle.net/10773/41269. 10.3390/biomedicines11082131 Inácio, José M.; Cristo, Fernando; Pinheiro, Miguel; Vasques-Nóvoa, Francisco; Saraiva, Francisca; Nunes, Mafalda M.; Rosas, Graça; et al. "Myocardial RNA Sequencing Reveals New Potential Therapeutic Targets in Heart Failure with Preserved Ejection Fraction". (2023): http://hdl.handle.net/10362/157766. https://doi.org/10.3390/biomedicines11082131 Francisco, Stephany; Martinho, Vera C.; Ferreira, Margarida; Reis, Andreia; Moura, Gabriela; Soares, Ana Raquel; Santos, Manuel A. S.. "The Role of MicroRNAs in Proteostasis Decline and Protein Aggregation during Brain and Skeletal Muscle Aging". (2022): http://hdl.handle.net/10316/103322. https://doi.org/10.3390/ijms23063232 Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana J.; Sousa, Nuno; Santos, Manuel A. S.; Simão, Paula; et al. "Evaluation of the genetic risk for COVID-19 outcomes in COPD and differences among worldwide populations". PLOS ONE 17 2 (2022): e0264009-e0264009. http://hdl.handle.net/10773/33905. 10.1371/journal.pone.0264009 Santos Marcalo, Rui Filipe; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana Joao; Sousa, Nuno; Santos, Manuel; Simao, Paula; et al. "DECIPHERING COPD AS A RISK GROUP FOR COVID-19: CAN WE BLAME GENETICS?". Medicine (2022): https://publons.com/wos-op/publon/57251242/. Rodrigues, Leonor; Cabral, Jorge; Tavares, Ana Helena; Enes, Vera; Pinheiro, Miguel; Moura, Gabriela; Afreixo, Vera. "Assessment of the stability of a procedure for variables selection in high dimensionality data: an application to genomic data - Alzheimer’s disease". (2022): http://hdl.handle.net/10773/38396. 10.34624/jshd.v4i1.28807 Rodrigues, Leonor Carvalho; Cabral, Jorge; Tavares, Ana Helena; Enes, Vera; Pinheiro, Miguel; Moura, Gabriela; Afreixo, Vera. "Assessment of the stability of a procedure for variables selection in high dimensionality data: an application to genomic data - Alzheimer’s Disease". (2022): https://doi.org/10.34624/jshd.v4i1.28807. https://doi.org/10.34624/jshd.v4i1.28807 Francisco, Stephany; Martinho, Vera; Ferreira, Margarida; Reis, Andreia; Moura, Gabriela; Soares, Ana Raquel; Santos Manuel A. S.. "The role of MicroRNAs in proteostasis decline and protein aggregation during brain and skeletal muscle aging". (2022): http://hdl.handle.net/10773/34660. 10.3390/ijms23063232 Francisco, Stephany; Martinho, Vera C.; Ferreira, Margarida; Reis, Andreia; Moura, Gabriela; Soares, Ana Raquel; Santos, Manuel A. S.. "The Role of MicroRNAs in Proteostasis Decline and Protein Aggregation during Brain and Skeletal Muscle Aging". (2022): https://hdl.handle.net/10316/103322. https://doi.org/10.3390/ijms23063232 Marçalo, Rui; Neto, Sonya; Pinheiro, Miguel; Rodrigues, Ana J.; Sousa, Nuno; Santos, Manuel A. S.; Simão, Paula; et al. "Evaluation of the genetic risk for COVID-19 outcomes in COPD and differences among worldwide populations". (2022): http://hdl.handle.net/10773/33905. 10.1371/journal.pone.0264009 Moura, G.. "Integration of segmented regression analysis with weighted gene correlation network analysis identifies genes whose expression is remodeled throughout physiological aging in mouse tissues". Aging 13 14 (2021): 18150-18190. http://dx.doi.org/10.18632/aging.203379. 10.18632/aging.203379 Moura, G.. "Protein Aggregation Patterns Inform about Breast Cancer Response to Antiestrogens and Reveal the RNA Ligase RTCB as Mediator of Acquired Tamoxifen Resistance". Cancers 13 13 (2021): 3195-3195. http://dx.doi.org/10.3390/cancers13133195. 10.3390/cancers13133195 Bezerra, Ana Rita; Oliveira, Carla; Correia, Inês; Guimarães, Ana Rita; Sousa, Gonçalo; Carvalho, Maria João; Moura, Gabriela; Santos, Manuel A. S.. "The role of non-standard translation in Candida albicans pathogenesis". FEMS Yeast Research 21 4 (2021): http://dx.doi.org/10.1093/femsyr/foab032. 10.1093/femsyr/foab032 Guimarães, Ana Rita; Correia, Inês; Sousa, Inês; Oliveira, Carla; Moura, Gabriela; Bezerra, Ana Rita; Santos, Manuel A.S.. "tRNAs as a Driving Force of Genome Evolution in Yeast". Frontiers in Microbiology 12 (2021): http://dx.doi.org/10.3389/fmicb.2021.634004. 10.3389/fmicb.2021.634004 Castanho, Teresa Costa; Santos, Nadine Correia; Meleiro-Neves, C.; Neto, S.; Moura, Gabriela; Santos, Manuel António da Silva; Cruz, Ana Rita Pereira da; et al. "Association of positive and negative life events with cognitive performance and psychological status in late life : a cross- sectional study in Northern Portugal". (2021): http://hdl.handle.net/10437/12153. Barbosa, Pedro; Melnyk, Stepan; Bennuri, Sirish C.; Delhey, Leanna; Reis, Andreia; Moura, Gabriela R; Børsheim, Elisabet; Rose, Shannon; Carvalho, Eugenia. "Redox imbalance and methylation disturbances in early childhood obesity". (2021): http://hdl.handle.net/10773/34659. 10.1155/2021/2207125 Guimarães, Ana Rita; Correia, Inês; Sousa, Inês; Oliveira, Carla; Moura, Gabriela; Bezerra, Ana Rita; Santos, Manuel A.S.. "tRNAs as a driving force of genome evolution in yeast". (2021): http://hdl.handle.net/10773/34657. 10.3389/fmicb.2021.634004 Bezerra, Ana Rita; Oliveira, Carla; Correia, Inês; Guimarães, Ana Rita; Sousa, Gonçalo; Carvalho, Maria João; Moura, Gabriela; Santos, Manuel A. S.. "The role of non-standard translation in Candida albicans pathogenesis". (2021): http://hdl.handle.net/10773/34661. 10.1093/femsyr/foab032 Barbosa, Pedro; Melnyk, Stepan; Bennuri, Sirish C; Delhey, Leanna; Reis, Andreia; Moura, Gabriela R; Børsheim, Elisabet; Rose, Shannon; Carvalho, Eugenia. "Redox Imbalance and Methylation Disturbances in Early Childhood Obesity". (2021): https://hdl.handle.net/10316/105315. https://doi.org/10.1155/2021/2207125 Barbosa, Pedro; Melnyk, Stepan; Bennuri, Sirish C.; Delhey, Leanna; Reis, Andreia; Moura, Gabriela R; Børsheim, Elisabet; Rose, Shannon; Carvalho, Eugenia. "Redox imbalance and methylation disturbances in early childhood obesity". (2021): http://hdl.handle.net/10773/34659. 10.1155/2021/2207125 Vitorino, Rui; Guedes, Sofia; Trindade, Fabio; Correia, Inês; Moura, Gabriela; Carvalho, Paulo; Santos, Manuel A. S.; Amado, Francisco; Santos, Manuel. "De novo sequencing of proteins by mass spectrometry". Expert Review of Proteomics 17 7-8 (2020): 595-607. http://dx.doi.org/10.1080/14789450.2020.1831387. 10.1080/14789450.2020.1831387 Francisco, Stephany; Ferreira, Margarida; Moura, Gabriela; Soares, Ana Raquel; Santos, Manuel A. S.; Santos, Manuel A.S.. "Does proteostasis get lost in translation? Implications for protein aggregation across the lifespan". Ageing Research Reviews 62 (2020): 101119. http://hdl.handle.net/10773/28883. 10.1016/j.arr.2020.101119 Tavares, Joana F.; Davis, Nick K.; Poim, Ana; Reis, Andreia; Kellner, Stefanie; Sousa, Inês; Soares, Ana R.; et al. "tRNA-modifying enzyme mutations induce codon-specific mistranslation and protein aggregation in yeast". RNA Biology (2020): 1-13. http://hdl.handle.net/10773/30815. 10.1080/15476286.2020.1819671 Cela, Marta; Paulus, Caroline; Santos, Manuel A. S.; Moura, Gabriela R.; Frugier, Magali; Rudinger-Thirion, Joëlle. "Plasmodium apicoplast tyrosyl-tRNA synthetase recognizes an unusual, simplified identity set in cognate tRNATyr". PLOS ONE 13 12 (2018): e0209805. http://hdl.handle.net/10773/27628. Open access • Published • 10.1371/journal.pone.0209805 Melro, Hélder; Gomes, Jorge; Moura, Gabriela; Marques, Alda. "Genetic profile and patient-reported outcomes in chronic obstructive pulmonary disease: A systematic review". PLoS ONE 13 12 (2018): e0198920. http://hdl.handle.net/10773/23641. Open access • Published • 10.1371/journal.pone.0198920 Weil, Tobias; Santamaría, Rodrigo; Lee, Wanseon; Rung, Johan; Tocci, Noemi; Abbey, Darren; Bezerra, Ana R.; et al. "Adaptive Mistranslation Accelerates the Evolution of Fluconazole Resistance and Induces Major Genomic and Gene Expression Alterations inCandida albicans". mSphere 2 4 (2017): http://hdl.handle.net/10773/27629. Open access • Published • 10.1128/msphere.00167-17 Bódi, Zoltán; Farkas, Zoltán; Nevozhay, Dmitry; Kalapis, Dorottya; Lázár, Viktória; Csörgo, Bálint; Nyerges, Ákos; et al. "Phenotypic heterogeneity promotes adaptive evolution". PLoS biology 15 5 (2017): e2000644-e2000644. http://hdl.handle.net/10773/27800. 10.1371/journal.pbio.2000644 Gaspar, P.; Moura, G.; Santos, M.A.S.; Oliveira, J.L.. "Erratum : mRNA secondary structure optimization using a correlated stem-loop prediction (Nucleic Acids Research (2013) 41:6 (e73) DOI: 10.1093/nar/gks1473)". Nucleic Acids Research 44 11 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84976435942&partnerID=MN8TOARS. 10.1093/nar/gkw127 Gaspar, P.; Luís Oliveira, J.; Frommlet, J.; Santos, M.A.S.; Moura, G.. "Erratum: EuGene: Maximizing synthetic gene design for heterologous expression (Bioinformatics (2012) 28: 20 (2683-2684))". Bioinformatics 32 7 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84964432672&partnerID=MN8TOARS. 10.1093/bioinformatics/btw063 Simões, João; Bezerra, Ana R.; Moura, Gabriela R.; Araújo, Hugo; Gut, Ivo; Bayes, Mónica; Santos, Manuel A. S.; et al. "The fungus Candida albicans tolerates ambiguity at multiple codons". Frontiers in Microbiology 7 MAR (2016): http://hdl.handle.net/10773/27803. 10.3389/fmicb.2016.00401 Moura, G.R.; Pinheiro, M.; Freitas, A.; Oliveira, J.L.; Frommlet, J.C.; Carreto, L.; Soares, A.R.; Bezerra, A.R.; Santos, M.A.S.. "Erratum: Species-Specific Codon Context Rules Unveil Non-Neutrality Effects of Synonymous Mutations (PLoS ONE (2011) 6:10 (e26817))". PLoS ONE 10 12 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84956899012&partnerID=MN8TOARS. 10.1371/journal.pone.0145593 Ragionieri, Lapo; Vitorino, Rui; Frommlet, Joerg; Oliveira, Jose L.; Gaspar, Paulo; Ribas de Pouplana, Lluis; Silva Santos, Manuel A.; et al. "Improving the accuracy of recombinant protein production through integration of bioinformatics, statistical and mass spectrometry methodologies". Febs Journal 282 4 (2015): 769-787. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000350288300010&KeyUID=WOS:000350288300010. 10.1111/febs.13181 Soares, Ana Raquel; Fernandes, Noémia; Reverendo, Marisa; Araújo, Hugo Rafael; Oliveira, José Luís; Moura, Gabriela M. R.; Santos, Manuel A. S.; et al. "Conserved and highly expressed tRNA derived fragments in zebrafish". BMC Molecular Biology 16 1 (2015): http://hdl.handle.net/10773/27821. 10.1186/s12867-015-0050-8 Reverendo, Marisa; Soares, Ana R.; Pereira, Patrícia M.; Carreto, Laura; Ferreira, Violeta; Gatti, Evelina; Pierre, Philippe; et al. "TRNA mutations that affect decoding fidelity deregulate development and the proteostasis network in zebrafish". (2014): http://hdl.handle.net/10773/27840. 10.4161/rna.32199 Gaspar, P.; Moura, G.; Santos, M.A.S.; Oliveira, J.L.. "MRNA secondary structure optimization using a correlated stem-loop prediction". Nucleic Acids Research 41 6 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84876044227&partnerID=MN8TOARS. 10.1093/nar/gks1473 Bezerra, A.R.; Simões, J.; Lee, W.; Rung, J.; Weil, T.; Gut, I.G.; Gut, M.; et al. "Reversion of a fungal genetic code alteration links proteome instability with genomic and phenotypic diversification". Proceedings of the National Academy of Sciences of the United States of America 110 27 (2013): 11079-11084. http://www.scopus.com/inward/record.url?eid=2-s2.0-84879727622&partnerID=MN8TOARS. 10.1073/pnas.1302094110 Mateus, D.D.; Paredes, J.A.; Español, Y.; Ribas de Pouplana, L.; Moura, G.R.; Santos, M.A.; De Pouplana, L.R.; et al. "Molecular reconstruction of a fungal genetic code alteration.". RNA biology 10 6 (2013): 969-980. http://www.scopus.com/inward/record.url?eid=2-s2.0-84894530120&partnerID=MN8TOARS. 10.4161/rna.24683 Gaspar, P.; Oliveira, J.L.; Frommlet, J.; Santos, M.A.S.; Moura, G.; Gaspar, Paulo; Oliveira, José Luís; et al. "EuGene: Maximizing synthetic gene design for heterologous expression". Bioinformatics 28 20 (2012): 2683-2684. http://www.scopus.com/inward/record.url?eid=2-s2.0-84870439703&partnerID=MN8TOARS. 10.1093/bioinformatics/bts465 Soares, A.R.; Pereira, P.M.; Ferreira, V.; Reverendo, M.; Simóes, J.; Bezerra, A.R.; Moura, G.R.; Santos, M.A.S.. "Ethanol exposure induces upregulation of specific microRNAs in zebrafish embryos". Toxicological Sciences 127 1 (2012): 18-28. http://www.scopus.com/inward/record.url?eid=2-s2.0-84860179523&partnerID=MN8TOARS. 10.1093/toxsci/kfs068 Soares, A.R.; Reverendo, M.; Pereira, P.M.; Nivelles, O.; Pendeville, H.; Bezerra, A.R.; Moura, G.R.; Struman, I.; Santos, M.A.S.. "Dre-miR-2188 targets Nrp2a and mediates proper intersegmental vessel development in zebrafish embryos". PLoS ONE 7 6 (2012): http://hdl.handle.net/10773/26659. 10.1371/journal.pone.0039417 Pinheiro, Miguel; Dias, Gaspar; Afreixo, Vera; Valente, Adelaide; Moura, Gabriela; Santos, Manuel A. S.; Oliveira, José Luís. "Sistema bioinformático para análise do mecanismo molecular de descodificação da informação genética". (2012): http://revistas.ua.pt/index.php/revdeti/article/view/1645. Lousado, José Paulo; Oliveira, José Luis; Moura, Gabriela; Santos, Manuel A. S.; Lousado, J.P.; Oliveira, J.L.; Moura, G.; Santos, M.A.S.. "An integrative approach for codon repeats evolutionary analyses". International Journal of Data Mining and Bioinformatics 6 4 (2012): 369-381. http://hdl.handle.net/10773/27635. 10.1504/ijdmb.2012.049294 Paredes, João A.; Carreto, Laura; Simões, João; Bezerra, Ana R.; Gomes, Ana C.; Santamaria, Rodrigo; Kapushesky, Misha; et al. "Low level genome mistranslations deregulate the transcriptome and translatome and generate proteotoxic stress in yeast". BMC Biology 10 (2012): http://hdl.handle.net/10773/26946. 10.1186/1741-7007-10-55 Freitas, A.; Afreixo, V.; Pinheiro, M.; Oliveira, J.L.; Moura, G.; Santos, M.. "Improving the performance of the iterative signature algorithm for the identification of relevant patterns". Statistical Analysis and Data Mining 4 1 (2011): 71-83. http://www.scopus.com/inward/record.url?eid=2-s2.0-79551712212&partnerID=MN8TOARS. 10.1002/sam.10104 Moura, G.R.; Pinheiro, M.; Freitas, A.; Oliveira, J.L.; Frommlet, J.C.; Carreto, L.; Soares, A.R.; et al. "Species-specific codon context rules unveil non-neutrality effects of synonymous mutations". PLoS ONE 6 10 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-80055031054&partnerID=MN8TOARS. 10.1371/journal.pone.0026817 Santos, Manuel A. S.; Gomes, Ana C.; Santos, Maria C.; Carreto, Laura C.; Moura, Gabriela R.; Santos, M.A.S.; Gomes, A.C.; et al. "The genetic code of the fungal CTG clade". Comptes Rendus - Biologies 334 8-9 (2011): 607-611. http://hdl.handle.net/10773/27643. 10.1016/j.crvi.2011.05.008 Carreto, Laura; Eiriz, Maria F.; Domingues, Inês; Schuller, Dorit; Moura, Gabriela R.; Santos, Manuel A. S.; Eiriz, Maria Francisca; et al. "Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains". BMC Genomics 12 (2011): http://hdl.handle.net/10773/25318. 10.1186/1471-2164-12-201 Lousado, José; Oliveira, José; Moura, Gabriela; Santos, Manuel. "An application for studying tandem repeats in orthologous genes". Advances in Bioinformatics (2010): http://hdl.handle.net/10400.19/1052. Moura, Gabriela R.; Paredes, João A.; Santos, Manuel A. S.; Moura, G.R.; Paredes, J.A.; Santos, M.A.S.. "Development of the genetic code: insights from a fungal codon reassignment". FEBS Letters 584 2 (2010): 334-341. http://hdl.handle.net/10773/27657. 10.1016/j.febslet.2009.11.066 Moura, G.R.; Carreto, L.C.; Santos, M.A.. "Genetic code ambiguity: an unexpected source of proteome innovation and phenotypic diversity". Current Opinion in Microbiology 12 6 (2009): 631-637. http://hdl.handle.net/10773/27660. 10.1016/j.mib.2009.09.004 Soares, Ana R.; Pereira, Patrícia M.; Santos, Bruno; Egas, Conceição; Gomes, Ana C.; Arrais, Joel; Oliveira, José L.; et al. "Parallel DNA pyrosequencing unveils new zebrafish microRNAs". BMC Genomics 10 (2009): http://hdl.handle.net/10773/27658. 10.1186/1471-2164-10-195 Silva, Raquel M.; Duarte, Iven C. N.; Paredes, João A.; Lima-Costa, Tatiana; Perrot, Michel; Boucherie, Hélian; Goodfellow, Brian J.; et al. "The yeast PNC1 longevity gene is up-regulated by mRNA mistranslation". PLoS ONE 4 4 (2009): http://hdl.handle.net/10773/27659. 10.1371/journal.pone.0005212 Lousado, J.P.; Oliveira, J.L.; Moura, G.R.; Santos, M.A.S.. "Analysing the evolution of repetitive strands in genomes". Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 5518 LNCS PART 2 (2009): 1047-1054. http://www.scopus.com/inward/record.url?eid=2-s2.0-77952571423&partnerID=MN8TOARS. 10.1007/978-3-642-02481-8_159 Lousado, J.P.; Moura, G.R.; Santos, M.A.S.; Oliveira, J.L.. "Exploiting codon-triplets association for genome primary structure analysis". Proceedings - International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies, BIOTECHNO 2008 (2008): 155-158. http://www.scopus.com/inward/record.url?eid=2-s2.0-52249109635&partnerID=MN8TOARS. 10.1109/BIOTECHNO.2008.21 Silva, R.M.; Paredes, J.A.; Moura, G.R.; Manadas, B.; Lima-Costa, T.; Rocha, R.; Miranda, I.; et al. "Critical roles for a genetic code alteration in the evolution of the genus Candida". EMBO Journal 26 21 (2007): 4555-4565. http://www.scopus.com/inward/record.url?eid=2-s2.0-35648984625&partnerID=MN8TOARS. 10.1038/sj.emboj.7601876 Moura, G.; Pinheiro, M.; Arrais, J.; Gomes, A.C.; Carreto, L.; Freitas, A.; Oliveira, J.L.; Santos, M.A.S.. "Large scale comparative codon-pair context analysis unveils general rules that fine-tune evolution of mRNA primary structure". PLoS ONE 2 9 (2007): http://www.scopus.com/inward/record.url?eid=2-s2.0-39449087192&partnerID=MN8TOARS. 10.1371/journal.pone.0000847 Gomes, A.C.; Miranda, I.; Silva, R.M.; Moura, G.R.; Thomas, B.; Akoulitchev, A.; Santos, M.A.S.. "A genetic code alteration generates a proteome of high diversity in the human pathogen Candida albicans". Genome Biology 8 10 (2007): http://www.scopus.com/inward/record.url?eid=2-s2.0-39149086991&partnerID=MN8TOARS. 10.1186/gb-2007-8-10-r206 Miranda, I.; Rocha, R.; Santos, M.C.; Mateus, D.D.; Moura, G.R.; Carreto, L.; Santos, M.A.S.. "A genetic code alteration is a phenotype diversity generator in the human pathogen Candida albicans". PLoS ONE 2 10 (2007): http://www.scopus.com/inward/record.url?eid=2-s2.0-39149117967&partnerID=MN8TOARS. 10.1371/journal.pone.0000996 Moura, Gabriela; Lousado, José; Pinheiro, Miguel; Carreto, Laura; Silva, Raquel; Oliveira, José; Santos, Manuel; et al. "Codon-triplet context unveils unique features of the Candida albicans protein coding genome". BMC Genomics 8 (2007): http://hdl.handle.net/10400.19/967. 10.1186/1471-2164-8-444 Lopes-Lima, M.; Moura, G.; Pratoomchat, B.; Machado, J.. "Correlation between the morpho-cytohistochemistry of the outer mantle epithelium of Anodonta cygnea with seasonal variations and following pollutant exposure". Marine and Freshwater Behaviour and Physiology 39 3 (2006): 235-243. http://www.scopus.com/inward/record.url?eid=2-s2.0-33747588091&partnerID=MN8TOARS. 10.1080/10236240600842691 Pinheiro, M.; Afreixo, V.; Moura, G.; Freitas, A.; Santos, M.A.S.; Oliveira, J.L.. "Statistical, computational and visualization methodologies to unveil gene primary structure features". Methods of Information in Medicine 45 2 (2006): 163-168. http://www.scopus.com/inward/record.url?eid=2-s2.0-33646827361&partnerID=MN8TOARS. Moura, Gabriela; Pinheiro, Miguel; Silva, Raquel; Miranda, Isabel; Afreixo, Vera; Dias, Gaspar; Freitas, Adelaide; et al. "Comparative context analysis of codon pairs on an ORFeome scale". Genome biology 6 3 (2005): http://hdl.handle.net/10773/27689. 10.1186/gb-2005-6-3-r28 Santos, M.A.S.; Moura, G.; Massey, S.E.; Tuite, M.F.. "Driving change: The evolution of alternative genetic codes". Trends in Genetics 20 2 (2004): 95-102. http://www.scopus.com/inward/record.url?eid=2-s2.0-1642513699&partnerID=MN8TOARS. 10.1016/j.tig.2003.12.009 Silva, Raquel M.; Miranda, Isabel; Moura, Gabriela; Santos, Manuel A. S.. "Yeast as a model organism for studying the evolution of non-standard genetic codes". (2004): http://hdl.handle.net/10773/27692. 10.1093/bfgp/3.1.35 Silva, R.M.; Miranda, I.; Moura, G.; Santos, M.A.. "Yeast as a model organism for studying the evolution of non-standard genetic codes.". Briefings in functional genomics & proteomics 3 1 (2004): 35-46. http://www.scopus.com/inward/record.url?eid=2-s2.0-10844224782&partnerID=MN8TOARS. Afreixo, V.; Pinheiro, M.; Oliveira, J.L.; Moura, Gabriela; Santos, Manuel; Freitas, A.. "Association between genetic symbols". Cadernos de Matemática 4 (2004): 1-25. Published Massey, S.E.; Moura, G.; Beltrão, P.; Almeida, R.; Garey, J.R.; Tuite, M.F.; Santos, M.A.S.; et al. "Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG condon in Candida spp". Genome Research 13 4 (2003): 544-557. http://www.scopus.com/inward/record.url?eid=2-s2.0-0242417617&partnerID=MN8TOARS. 10.1101/gr.811003 Moura, Gabriela; Miranda, Isabel; Cheesman, Caroline; Tuite, Mick F.; Santos, Manuel A. S.; Moura, G.; Miranda, I.; et al. "Stop codon decoding in Candida albicans: from non-standard back to standard". Yeast 19 9 (2002): 727-733. http://hdl.handle.net/10773/27699. 10.1002/yea.874 Moura, G.; Vilarinho, L.; Santos, A.C.; Machado, J.. "Organic compounds in the extrapalial fluid and haemolymph of Anodonta cygnea (L.) with emphasis on the seasonal biomineralization process". Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology 125 3 (2000): 293-306. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034015755&partnerID=MN8TOARS. 10.1016/S0305-0491(99)00192-3 Moura, G.; Vilarinho, L.; Machado, J.. "The action of Cd, Cu, Cr, Zn, and Pb on fluid composition of Anodonta cygnea (L.): Organic components". Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology 127 1 (2000): 105-112. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034283435&partnerID=MN8TOARS. 10.1016/S0305-0491(00)00241-8 Moura, G.; Guedes, R.; Machado, J.. "The extracellular mineral concretions in Anodonta cygnea (L.): Different types and manganese exposures caused changes". Journal of Shellfish Research 18 2 (1999): 645-650. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033386683&partnerID=MN8TOARS. Almeida, M.J.; Machado, J.; Moura, G.; Azevedo, M.; Coimbra, J.. "Temporal and local variations in biochemical composition of Crassostrea gigas shells". Journal of Sea Research 40 3-4 (1998): 233-249. http://www.scopus.com/inward/record.url?eid=2-s2.0-0032405698&partnerID=MN8TOARS. 10.1016/S1385-1101(98)00033-1 Almeida, M.J.; Moura, G.; Pinheiro, T.; Machado, J.; Coimbra, J.. "Modifications in Crassostrea gigas shell composition exposed to high concentrations of lead". Aquatic Toxicology 40 4 (1998): 323-334. http://www.scopus.com/inward/record.url?eid=2-s2.0-0031940770&partnerID=MN8TOARS. 10.1016/S0166-445X(97)00062-3 Almeida, M.J.; Moura, G.; Machado, J.; Coimbra, J.; Vilarinho, L.; Ribeiro, C.; Soares-da-Silva, P.. "Amino acid and metal content of Crassostrea gigas shell infested by Polydora sp. in the prismatic layer insoluble matrix and blister membrane". Aquatic Living Resources 9 2 (1996): 179-186. http://www.scopus.com/inward/record.url?eid=2-s2.0-0008495129&partnerID=MN8TOARS.
Preprint	Correia, Inês; Oliveira, Carla; Reis, Andreia; Guimarães, Ana Rita; Aveiro, Susana; Domingues, Pedro; Bezerra, Ana Rita; et al. "A proteogenomic pipeline for the analysis of protein biosynthesis errors in the human pathogen Candida albicans". 2023. http://dx.doi.org/10.1101/2023.10.31.564356. 10.1101/2023.10.31.564356 Oliveira, Carla; Guimarães, Ana Rita; Correia, Inês; Sousa, Inês; Poim, Ana; Rocha, Sílvia M.; Moura, Gabriela; Santos, Manuel A. S.; Bezerra, Ana Rita. "Filamentation in Candida albicans is modulated by adaptive translation of farnesol signalling genes". 2021. http://dx.doi.org/10.1101/2021.01.20.427544. 10.1101/2021.01.20.427544
Thesis / Dissertation	Moura, G.. "FTIR as an evaluator of DNA quality in aging". Master, Universidade de Aveiro Instituto de Biomedicina, 2021. Moura, G.. "Diversidade genética e perfil de suscetibilidade a antifúngicos de dez isolados clínicos de Candida spp". Master, Universidade de Aveiro Instituto de Biomedicina, 2021. Felix, Natália Rigos. "FTIR: uma potencial metodologia para o rastreio de marcadores de envelhecimento no DNA". Master, 2021. http://hdl.handle.net/10773/30953. Silva, Catarina Almeida e. "Genetic diversity and antifungal susceptibility profile of ten clinical isolates of Candida spp". Master, 2021. http://hdl.handle.net/10773/30757. Moura, G.. "O efeito modelador da tradução errada de genes em Candida albicans na interação hospedeiro-patogénio e na patogénese". PhD, Universidade de Aveiro Instituto de Biomedicina, 2020. Conceição, Carolina Neves. "Differential DNA methylation in aging: in silico exploration using high-throughput datasets". Master, Universidade de Aveiro Departamento de Química, 2018. http://hdl.handle.net/10773/24223. Brito, Maria Luísa Saragoça Falcão de. "Metagenomic analysis of saliva microbiome in patients with chronic obstructive pulmonary disease". Master, 2018. http://hdl.handle.net/10773/22041. Tavares, Joana Formigal. "Identification of novel regulators of protein synthesis fidelity using high content genetic screens". PhD, 2018. http://hdl.handle.net/10773/22825. Varanda, Ana Sofia Paulo Varanda. "Unravelling the cellular networks that regulate proteotoxic stress". PhD, 2017. http://hdl.handle.net/10773/22243. Eulálio, Inês Mariana Cardoso. "Developmente of a CNVs detection method through qPCR". Master, 2017. http://hdl.handle.net/10773/22507. Pinto, Cátia Carvalho. "Vine microbiome: a deep analysis of the natural microbial community of Vitis vinifera L.". PhD, 2017. http://hdl.handle.net/10773/22642. Melro, Hélder Filipe Fernandes. "Contributions for unravelling chronic obstructive pulmonary disease trajectory: associations between genetics and clinical measures". Master, 2017. http://hdl.handle.net/10773/21403. Fernandes, Joana Pinto. "Wine & health: biotechnology tools to promote consumers'health". PhD, 2017. http://hdl.handle.net/10773/22660. Cluny, Vasco Silva Oliveira. "Exploratory study of age related epigenomic patterns". Master, 2016. http://hdl.handle.net/10773/17887. Lobato, Carolina Botto Courinha. "A study of alternative initiation codons in Candida cylindracea". Master, 2016. http://hdl.handle.net/10773/17152. Ferreira, Susana Catarina da Costa. "Study of the epigenetic signals in the human genome". Master, 2016. http://hdl.handle.net/10773/16568. Espírito, Ana Cláudia Pereira. "Saccharomycotin transcriptomics by next-generation sequencing". Master, 2015. http://hdl.handle.net/10773/15677. Silva, Nuno Miguel Pereira Mogas da. "Computational system for gene analysis and redesign". Master, 2013. http://hdl.handle.net/10773/12680. Jesus, Ana Filipa Ligeiro de. "Erros de tradução no mRNA e instabilidade genómica". Master, 2012. http://hdl.handle.net/10773/10743. Tavares, Joana Formigal. "Study of the factors that influence proteotoxic stress in yeast". Master, 2012. http://hdl.handle.net/10773/9730. Gaspar, Paulo Miguel da Silva. "Gene optimization for heterologous expression". Master, 2010. http://hdl.handle.net/10773/7238. Moura, G.. "Estudo dos mecanismos de calcificação num modelo bivalve". PhD, Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, 2000.

Other

Other output

Integration of differential gene expression with weighted gene correlation network analysis identifies genes whose expression is remodeled throughout physiological aging in mouse tissues. 2021. Margarida Ferreira; Stephany Francisco; Ana R. Soares; Ana Nobre; Miguel Pinheiro; Andreia Reis; Sonya Neto; et al. https://doi.org/10.1101/2021.02.18.431793.
10.1101/2021.02.18.431793
Recurrent vulvovaginal candidiasis – RVVC. Sem resumo disponível.. 2020. Moura, Gabriela. http://hdl.handle.net/10773/34664.
How ambiguous are you? The role of tRNAs on yeast gene evolution. 2018. Moura, Gabriela. http://hdl.handle.net/10773/34662.

Activities

Supervision

	Thesis Title Role	Degree Subject (Type) Institution / Organization
2022/09/01 - Current	Enhance genetic diagnostics through genome-scale approaches: whole exome sequencing Co-supervisor	Doctoral Program in Biomedicine (PhD) Universidade de Aveiro, Portugal
2020 - Current	The genetic contribution for COPD susceptibility, prognosis and treatment response Supervisor	Universidade de Aveiro Instituto de Biomedicina, Portugal Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2015 - Current	Study of the human epigenome during ageing Supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2017 - 2025/04/03	Protein synthesis control of proteostasis in aging mice Co-supervisor	Biomedicine (PhD) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2022/09/01 - 2024/12/19	Contribution to more efficient lab protocols for Personal Medicine of fungal infections Co-supervisor	Molecular and Celular Biology (Master) Universidade de Aveiro, Portugal
2021/06/01 - 2023/12/20	Exome sequencing vs microarrays genotyping – contribution to a populational study Co-supervisor	Laboratorial Clinic Genetics (Master) Centro Hospitalar e Universitario de Coimbra EPE Hospital Geral, Portugal
2017 - 2023/12/20	Unravelling the roles of proteotoxic stress on genome diversification and disease Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2021/09/01 - 2023/12/18	Codon usage bias in health and in sickness: is this a problem? Co-supervisor	Clinic Bioinformatics (Master) Universidade de Aveiro, Portugal
2016 - 2023/12/14	Loss of proteostasis in cancer: alterations in steroid hormone receptor function leading to endocrine therapy resistance Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2021/09/01 - 2023/06/01	Towards a heritability database – text mining strategies to help geneticists Co-supervisor	Clinic Bioinformatics (Master) Universidade de Aveiro, Portugal
2020/09/01 - 2022/06/01	Genetic characterization of Candida albicans isolates from distinct clinical human samples and the clinical environment Co-supervisor	Microbiology (Master) Universidade de Aveiro, Portugal
2020 - 2022	Investigation of non-AUG dependent pentanucleotide repeat translation in SCA37 Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
2019/09/01 - 2021/06/01	AnalyzeR: Shiny web application for interactive data analysis Supervisor	Medical Statistics (Master) Universidade de Aveiro, Portugal
2019 - 2021	Diversidade genética e perfil de suscetibilidade a antifúngicos de dez isolados clínicos de Candida spp Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal
2019 - 2021	FTIR as an evaluator of DNA quality in aging Supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal
2013 - 2020/12/17	Candida albicans gene mistranslation as a modulator of host-pathogen interactions and pathogenesis Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2019 - 2020	DNA extraction protocol for metagenomics of bacteria and yeast Supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal
2019 - 2020	Integrative metagenomic approach using Nanopore sequencing technology Supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal Universidade de Aveiro Instituto de Biomedicina, Portugal
2016 - 2018	Metagenomic analysis of saliva microbiome in patients with chronic obstructive pulmonary disease Supervisor	Molecular Methods (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2015 - 2018	Differential DNA methylation in aging: in sillico exploration using high-throughput datasets Supervisor	Biotechnology (Master) Universidade de Aveiro Departamento de Química, Portugal
2013 - 2018	Identification of novel regulators of protein synthesis fidelity using high content genetic screens Supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016 - 2017	Contributions for unravelling chronic obstructive pulmonar disease trajectory: associations between genetics and clinical measures Co-supervisor	Molecular Biomedicine (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016 - 2017	Development of a CNVs detection method through qPCR Supervisor	Biotechnology (Master) Universidade de Aveiro Departamento de Química, Portugal
2013 - 2017	VineMicrobiome: uma análise aprofundada do microbioma natural da vinha (Vitis vinífera L.) Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2013 - 2017	Wine & Health: biotechnology tools to promote consumer’s health Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2012 - 2017	Unravelling the cellular networks that regulate proteotoxic stress Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2012 - 2017	Elucidating the role of genome mistranslation on mitochondrial dysfunction Co-supervisor	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2015 - 2016	Exporatory study of age related epigenomic patterns Supervisor	Biotechnology (Master) Universidade de Aveiro Departamento de Química, Portugal
2015 - 2016	A study of alternative initiation codons in Candida cylindracea Supervisor	Molecular Biomedicine (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2015 - 2016	Estudo de sinais epigenéticos no genoma humano Co-supervisor	Molecular Biomedicine (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2014 - 2015	Saccharomycotin transcriptomics by next-generation sequencing Supervisor	Molecular Biomedicine (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2011 - 2013	Computational system for gene analysis and redesign Co-supervisor	Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal
2010 - 2012	Study of the factors that influence proteotoxic stress in yeast Supervisor	Molecular Biomedicine (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2010 - 2012	mRNA mistranslation and genomic instability Co-supervisor	Biotechnology (Master) Universidade de Aveiro Departamento de Química, Portugal
2006 - 2012	The role of environmental stress on protein synthesis fidelity Co-supervisor	Universidade de Aveiro Departamento de Biologia, Portugal
2009 - 2011	mRNA mistranslation in Saccharomyces cerevisiae Co-supervisor	Universidade de Aveiro Departamento de Biologia, Portugal
2005 - 2011	Análise de tripletos e de repetições em estruturas primárias de DNA Co-supervisor	Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal
2008 - 2010	Gene optimization for heterologous expression Co-supervisor	Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal

Event organisation

	Event name Type of event (Role)	Institution / Organization
2023/03/23 - 2023/03/23	iBiMED Seminar. Title: From Astrophysics to Genomics: a road less travelled. Guest: Vasco Neves (2023 - 2023) Seminar (Co-organisor)	Universidade de Aveiro, Portugal
2021/12/11 - 2021/12/11	iBiMED Seminar. Title: Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens: Characterisation of gut bacterial isolates and bacteria causing infection in low- and middle-income countries Guest: Maria João Carvalho (2021 - 2021) Seminar (Co-organisor)	Universidade de Aveiro, Portugal
2019 - 2019	GenomePT Symposium (2019) Symposium (Member of the Organising Committee)	Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2017 - 2017	XLI Jornadas Portuguesas de Genética – Sociedade Portuguesa de Genética (2017) Meeting (Member of the Organising Committee)	Universidade de Aveiro, Portugal
2010 - 2010	23rd International tRNA Meeting – from the origin of life to biomedicine (2010) Meeting (Member of the Organising Committee)	Universidade de Aveiro, Portugal
2006 - 2006	XVth National Congress of Biochemistry (2006) Congress (Member of the Organising Committee)	Universidade de Aveiro, Portugal
2006 - 2006	3ª Reunião Anual de Biologia do RNA (RNA2008) (2006) Meeting (Member of the Organising Committee)	Universidade de Aveiro, Portugal
2004 - 2004	XII Jornadas de Biologia de Leveduras: Professor Nicolau Van Uden (2004) Meeting (Member of the Organising Committee)	Universidade de Aveiro, Portugal
2003 - 2003	Genomics and Proteomics – Biophysical Perspectives. 5th short course of the Portuguese Biophysical Society (2003) Workshop (Member of the Organising Committee)	Universidade de Aveiro, Portugal
1998/01/10 - 1998/01/15	Calcification and Mineralization (1998 - 1998) Workshop (Co-organisor)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Jury of academic degree

	Topic Role	Candidate name (Type of degree) Institution / Organization
2025/03/31	Leigh syndrome – new variants, new perspectives in a heterogeneous neurodegenerative disease (Thesis) Arguer	Manuela Schubert Baldo (PhD) Universidade do Porto, Portugal
2023/12/21	ReporType: Ferramenta bioinformática flexível para pesquisa de locus e genotipagem de agentes infecciosos President of the jury	Helena Isabel dos Santos Cruz (Master) Universidade de Aveiro, Portugal
2023/12/20	Recoding the Saccharomyces cerevisiae genome Thesis Member	Ana Rita Guimarães Rodrigues da Silva (PhD) Universidade de Aveiro, Portugal
2023/12/20	O varioma português de mais de 12 000 exomas President of the jury	Mariana Raquel Pinto Ribeiro (Master) Universidade de Aveiro, Portugal
2023/02/01	Genotyping microarrays vs whole exome sequencing: contributions to a population study Supervisor	Thaís Baeta Córdova de Oliveira (Master) Universidade de Coimbra, Portugal
2021/02/24	FTIR as an evaluator of DNA quality in aging Supervisor	Natália Rigos Félix (Master) Universidade de Aveiro, Portugal
2020	Pheno-metabolomics: integrative bioinformatics for yeast molecular biotechnology Thesis Member	Edgar da Silva Lopes (PhD) Universidade de Aveiro Instituto de Biomedicina, Portugal
2019	Morphological and protein aggregation changes in the aging mammary gland and breast cancer President of the jury	Daniela Filipa Duarte Figueira (Master) Universidade de Aveiro Instituto de Biomedicina, Portugal
2017	Development of a CNVs detection method through qPCR Supervisor	Inês Mariana Cardoso Eulálio (Master) Universidade de Aveiro Departamento de Química, Portugal
2014	Pheno-metabolomics: integrative bioinformatics for yeast molecular biotechnology (Thesis) Main arguer	Ricardo Filipe Azevedo Franco Duarte (PhD) Universidade do Minho Escola de Ciências, Portugal
2013	Interactor factor as suppressor of mutated mitochondrial tRNA (Thesis) Arguer	Gil Daniel Bregieiro Carraco (Master) Universidade de Aveiro Departamento de Química, Portugal
2013	Utilização do modelo experimental de leveduras Saccharomyces cerevisiae para estudos de metais pesados em doenças neurodegenerativas (Thesis) Arguer	Luís Rafael Rebelo e Silva (Master) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal
2013	A neurotoxicidade do chumbo e sua possível relação causal com a demência de Alzheimer (Thesis) Arguer	Ângela Maria Gonçalves Pimenta (Master) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal
2013	Estudo da variabilidade fenotípica de Saccharomyces cerevisiae ambiental (Thesis) Arguer	Carlos António Pascoal Marques (Other) Universidade de Aveiro Departamento de Biologia, Portugal
2012	mRNA mistranslation and genomic instability Thesis Member	Ana Filipa Ligeiro de Jesus (Master) Universidade de Aveiro Departamento de Química, Portugal
2012	Study of the factors that influence proteotoxic stress in yeast Supervisor	Joana Formigal Tavares (Master) Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2011	Molecular reconstruction of a genetic code alteration Thesis Member	Denisa Daud Mateus (PhD) Universidade de Aveiro Departamento de Biologia, Portugal
2011	Triplet and repetition analysis in DNA primary structures Thesis Member	José Paulo Ferreira Lousado (PhD) Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal
2011	Técnicas moleculares na detecção de vírus respiratórios President of the jury	Katherine Alejandra da Silva Rodrigues (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2011	Utilidade clínica da quantificação do antigénio do core do VHC President of the jury	Nuno Ricardo Gonçalves da Silva (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2011	Biossensor para deteção do antigénio específico da próstata President of the jury	Nélia Maria Pinto de Oliveira (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2011	mRNA mistranslation in Saccharomyces cerevisiae Thesis Member	Jorge Fernando Ferreira de Sousa Paulo (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2011	Síntese de genes de novo (Thesis) Arguer	Joana Pinto Fernandes (Master) Universidade de Aveiro Departamento de Química, Portugal
2011	The cellular response to mRNA mistranslation in mammalian cells (Thesis) Arguer	Mafalda Maria Coelho Azevedo (Other) Universidade de Aveiro Departamento de Biologia, Portugal
2010	Identificação molecular de bactérias patogénicas em amostras clínicas (Thesis) Arguer	Joana Matos de Almeida (Master) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal
2010	Gene optimization for heterologous expression Thesis Member	Paulo Miguel da Silva Gaspar (Master) Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal
2009	Interacção entre mercúrio e sistemas biológicos (Thesis) Main arguer	Mónica Elisabete da Silva Cunha (PhD) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2009	Efeito biológico do chumbo – Estudo por microscopia electrónica de varrimento e microanálise por raio-X (SEM-XRM) – importância médico-legal (Thesis) Arguer	Maria Isabel Sá de Oliveira (Master) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2008	FK506-binding proteins: identification and analysis in Neurospora crassa (Thesis) Arguer	Débora Manuela Moreira Pinto (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2008	HLA and hemochromatosis disease association in São Miguel Island (Thesis) Arguer	Cidália Maria Teixeira Gomes (Master) Universidade de Aveiro Departamento de Biologia, Portugal
2004	Método de detecção do mercúrio e outros metais (SEM-XRM): importância Médico-Legal (Thesis) Arguer	Mónica Elisabete da Silva Cunha (Master) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Ad Hoc journal article review

	Journal title (ISSN)	Publisher
2023 - Current	Frontiers Cellular and Infection Microbiology
2023 - Current	BMC Bioinformatics
2023 - Current	BMC Genomics
2023 - Current	International Journal of Biological Macromolecules
2022 - Current	Computational and Structural Biotechnology Journal
2021 - Current	PeerJ – J Life & Environ Sci
2020 - Current	Clinical Epigenetics
2019 - Current	Archives of Applied Medicine
2017 - Current	BMC Genetics
2016 - Current	Scientific Reports
2015 - Current	Journal of Biomedical Semantics
2012 - Current	World Journal of Microbiology & Biotechnology
2010 - Current	BMC Evolutionary Biology
2009 - Current	Journal of Bioinformatics and Computational Biology
2008 - Current	BMC Biotechnology
2008 - Current	Amino Acids

Association member

	Society Organization name	Role
2022/01/01 - Current	Associação Portuguesa de Micologia Médica (ASPOMM)	member
2022 - Current	European Society of Human Genetics
2022 - Current	American Society of Human Genetics
2022 - Current	Portuguese Society of Human Genetics
2021 - Current	Portuguese Society of Genetics
2005 - Current	Portuguese Biochemistry Society
1995 - Current	Ordem dos Biólogos

Committee member

	Activity description Role	Institution / Organization
2019 - Current	Degree Committee for the Master degree in Medical Statistics Member	Universidade de Aveiro Departamento de Matemática, Portugal
2017 - Current	Counsel of the Department of Medical Sciences Member	Universidade de Aveiro, Portugal
2016 - Current	Scientific Counsel of the Institute of Biomedicine (iBiMED) Member	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2018 - 2022/06/01	Ethics Council of the Department of Medical Sciences Member	Universidade de Aveiro Departamento de Ciências Médicas, Portugal

Conference scientific committee

	Conference name	Conference host
2021 - Current	Statistics on Health Decision Making	Department of Mathematics, University of Aveiro
2024/05/10 - 2024/05/10	BioNexus - 1st edition	DCM-UA
2023/11/17 - 2023/11/17	3rd GenomePT Symposium	INSA-Lisbon
2019 - 2019	GenomePT Symposium	Vairão

Course / Discipline taught

	Academic session	Degree Subject (Type)	Institution / Organization
2021 - Current	Laboratories of Biomedicine	Biomedicine (Licenciatura)	Universidade de Aveiro, Portugal
2019 - Current	Human Genetics	Biomedical Sciences (Licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2019 - Current	Molecular Medicine	Biomedical Sciences (Mestrado)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2019 - Current	Fundamentals of Biomedicine	Medical Statistics (Mestrado)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2018 - Current	Human Genetics and Genomics	Doctoral Program in Biomedical Sciences (Doutoramento)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2017 - Current	Genomics of aging	Doctoral Program in Biomedical Sciences (Doutoramento)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016 - Current	"Da molécula à doença"; "Genética"	Academia de Verão (Outros)	Universidade de Aveiro, Portugal
2012 - Current	Medical Genetics	Biomedical Sciences (Licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2017 - 2019	Molecular Laboratories	Biomedical Sciences (Mestrado)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2014 - 2019	Introduction to Health Sciences	Biomedical Sciences (Licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016 - 2017	RNA-seq data analysis: methodologies for gene expression studies	iBiMED International Advances Training School (Especialização pós-licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016 - 2017	Translational Medicine	Biomedical Sciences, Molecular Biology (Mestrado)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2016/12/13 - 2016/12/30	Genomics in Neurosciences	iBiMED International Advanced Training School (Especialização pós-licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2013 - 2014	Bioinformatics	Biology and Teaching of Biology and Geology (Licenciatura)	Universidade de Aveiro Departamento de Biologia, Portugal
2011 - 2012	RNA Biology	Applied Biology, Molecular and Cellular Biology and Biotechnology (Mestrado)	Universidade de Aveiro Departamento de Biologia, Portugal
2004 - 2011	Introduction to Molecular Biology	Forensic Medicine (Mestrado)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2008 - 2010	Genomics	Biomedicine (Licenciatura)	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2006 - 2007	Biochemistry	Biology and Environmental Engineering (Licenciatura)	Universidade de Aveiro Departamento de Biologia, Portugal
2005 - 2007	Microbiology	Biology and Environmental Engineering (Licenciatura)	Universidade de Aveiro Departamento de Biologia, Portugal
2005 - 2007	Genetics	Biology and Teaching of Biology and Geology (Licenciatura)	Universidade de Aveiro Departamento de Biologia, Portugal
2004 - 2005	Physiology	Physiotherapy and Radiology (Licenciatura)	Instituto Politécnico do Porto Escola Superior de Saúde, Portugal

Evaluation committee

	Activity description Role	Institution / Organization	Funding entity
2020 - Current	Element of the juri to decide access of students to the Masters and Specialization degrees in Medical Statistics Member	Universidade de Aveiro, Portugal
2022 - 2023	Evaluator of the Biomedicine panel of Fundação para a Ciência e Tecnologia (FCT) for PhD fellowship awards Evaluator	Fundação para a Ciência e a Tecnologia, Portugal

Interview (newspaper / magazine)

	Activity description	Newspaper / Forum
2024/04/25	Interview “A Medicina que se foca na prevenção e na economia da Saúde”, under the scope of the International day of DNA	Valor Magazine

Other jury / evaluation

	Activity description	Institution / Organization
2019 - Current	Juri member for poster evaluation at X Jornadas Nacionais de Ciências Biomédicas	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2019 - 2019	Juri member for poster evaluation at X Jornadas Nacionais de Ciências Biomédicas	Universidade de Aveiro Departamento de Ciências Médicas, Portugal
2017 - 2017	Chair of a session at the XLI Jornadas Portuguesas de Genética	Universidade de Aveiro Departamento de Ciências Médicas, Portugal

Distinctions

Award

2016	Scientific photography award iBiMED Universidade de Aveiro Instituto de Biomedicina, Portugal
1992	Eng.º António de Almeida for the best classification at the degree Fundação Engenheiro António de Almeida, Portugal

Title

2024	Director of the Master on Clinic Bioinformatics Universidade de Aveiro, Portugal

Other distinction

2002	Post-doc grant (SFRH/BPD/7195/2001 - FCT) Fundação para a Ciência e a Tecnologia, Portugal
2000	Post-doc grant (PRAXIS/P/SAU/14123/1998) Fundação para a Ciência e a Tecnologia, Portugal
1993	PhD grant (BD/2684/93), program CIENCIA - JNICT Fundação para a Ciência e a Tecnologia, Portugal