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José Maria Santos is an Assistant Professor from the School of Agriculture, University of Lisbon. He has been developing research mainly in Ecohydraulics, Water Resources, and River Restoration and Modelling for the last twenty years. He has 75 articles in SCOPUS (H-index = 30), and more than 2400 citations. He has 30 articles in international conference proceedings and is author of 4 articles in national journals and of 21 articles in national conference proceedings. He is also author of 164 oral communications (9 by invitation) and posters, at international (136) and national (28) meetings. He has reviewed 330+ manuscripts, edited 110+ manuscrits from 60+ ISI Web of Science journals. He is Associate Editor from Water (ISSN 2073-4441), the Journal of Ecohydraulics (ISSN: 2470-5365) and Frontiers in Environmental Science (2296-665X). He is also the Guest Editor of a Special Issue in Sustainability (ISSN 2071-1050). He recently coordinated an FCT exploratory project (IF/00020/2015) targeting the development of holistic fishways to restore fish passage, which followed the FishMove (PTDC/AGR-CFL/117761/2010), that he also coordinated. He is presently the Co-PI of the EcoPeak4Fish project funded by FCT, aiming to develop an integrated approach to support self-sustaining fish populations downstream hydropower plants. He participated in 4 European projects (the most recent the ongoing MERLIN project; https://project-merlin.eu/) and 10 national projects with research and development typology. He also participated in 13 knowledge transfer projects, of which 5 as Responsible, most of them financed by EDP (Energias de Portugal, S.A.), and focused on the area of rehabilitation and restoration of ecosystems, ecohydraulics and ecohydrology, particularly fishways and environmental flows. He supervised 5 PhD theses (2 ongoing) and 7 MSc dissertations (3 ongoing). He organized 8 scientific events (4 international), is member of 2 specialized committees (1 as President) of the Portuguese Association of Water Resources and coordinated 1 international workshop on Fish Passage and Barriers. He was member of the scientific committee of 5 international conferences. He is member of the Executive Board of the Forest Research Centre (a research unit funded by FCT, and classified as “Excellent”). He has received 9 distinctions, being the last one (2020), the ULisbon/CGD Scientific Award.
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Identification

Personal identification

Full name
José Maria Santos

Citation names

  • Santos, J.M.

Author identifiers

Ciência ID
BC14-A6F8-36F0
ORCID iD
0000-0003-1232-2560
Google Scholar ID
iFFKLaAAAAAJ
Researcher Id
F-9022-2010
Scopus Author Id
35481059400

Websites

Knowledge fields

  • Agrarian Sciences - Agriculture, Forestry and Fisheries

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Proficiency (C2) Advanced (C1) Advanced (C1) Proficiency (C2)
Spanish; Castilian Advanced (C1) Advanced (C1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Education
Degree Classification
2004/12/15
Concluded
 Engenharia Florestal (Doutoramento)
Major in Sem especialidade
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
"Effects of River Regulation on Fish Assemblages in Central and the Role of Fish Passes" (THESIS/DISSERTATION)
2000 - 2000
Concluded
 Limnologia (Pós-Graduação)
Centre International de Hautes Etudes Agronomiques Méditerranéennes, France
1992 - 1997
Concluded
 Engenharia Florestal e dos Recursos Naturais (Licenciatura)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
"Distribuição espacial das comunidades piscícolas da bacia do Guadiana e sua relação com os factores ambientais" (THESIS/DISSERTATION)
 Bom
Affiliation

Science

Category
Host institution 		Employer
2018/02/01 - 2019/11/30 Principal Investigator (Research) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2014/11/01 - 2018/01/31 Researcher (Research) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2008/05/31 - 2013/05/31 Auxiliary Researcher (Research) Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2019/12/01 - Current Assistant Professor (University Teacher) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Others

Category
Host institution 		Employer
2006/12/01 - 2008/05/30 Post-doctoral fellow (grant no. BPD/26417/2006 awarded by FCT) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2005 - 2006 Post-doctoral fellow Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2000 - 2004 PhD fellow (grant no. BD/852/2000 awarded by FCT) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
Projects

Contract

Designation Funders
2022/01/01 - Current DAMMED FISH: Impact of structural and functional river network connectivity losses on fish biodiversity ¿ Optimising management solutions
PTDC/CTA-AMB/4086/2021
PTDC/CTA-AMB/4086/2021
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2021/10/01 - Current MERLIN - Mainstreaming Ecological Restoration of freshwater-related ecosystems in a Landscape context: INnovation, upscaling and transformation
101036337
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 European Commission
Ongoing
2021/04/01 - Current AQUADAPT - Ecossistemas fluviais à prova de alterações climáticas para uma gestão sustentável
PD20-00008
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação La Caixa
Ongoing
2022/09/14 - 2026/09/13 CA21104 - Pan-European Network for Sustainable Hydropower (PEN@Hydropower)
CA21104
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 European Union
Ongoing
2021/01/01 - 2025/12/31 Laboratório para a Sustentabilidade do Uso da Terra e dos Serviços dos Ecossistemas
LA/P/0092/2020
Researcher
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2021/03/01 - 2024/08 ECOPEAK4FISH: an integrated approach to support self-sustaining fish populations downstream hydropower plants
PTDC/EAM-AMB/4531/2020
Co-Principal Investigator (Co-PI)
Universidade de Lisboa Instituto de Investigação e Inovação em Engenharia Civil para a Sustentabilidade, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2018/10/02 - 2021/10/01 OPTIMUS PRIME - Optimal greening of irrigated farmland to achieve a prime environment
PTDC/ASP-AGR/29771/2017
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2018 - 2021 ALIENTRADE - Impacts of the global trade of animals on the establishment of invasive species
POCI-01-0145-FEDER-30931
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2017 - 2020 Video-Monitoring of the Touvedo Fish Lift
Video-Monitoring of the Touvedo Fish Lift
Principal investigator
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 EDP
Ongoing
2018/02/01 - 2019/11/30 Development of holistic fishways to restore fish passage at river obstructions
IF/00020/2015
Principal investigator
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2018 - 2019 Passability of the Pego weir for migratory fish species
Passability of the Pego weir for migratory fish species
Principal investigator
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 PEGOP
Ongoing
2014 - 2018 MARS: Managing Aquatic ecosystems and water Resources under multiple Stress
603378
Researcher
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 European Commission Seventh Framework Programme for Research and Technological Development Environment
Concluded
2015 - 2016 Monitoring of the fish component in the Odelouca River II
Monitoring of the fish component in the Odelouca River II
Researcher
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Águas do Algarve
Concluded
2012/03 - 2015/03 FISHMOVE - Development of mitigation measures for small instream obstacles to fish migration in Portuguese streams
info:eu-repo/grantAgreement/FCT/3599-PPCDT/117761/PT
Principal investigator
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2013 - 2014 Monitoring of the fish component in the Odelouca River I
Monitoring of the fish component in the Odelouca River I
Principal investigator
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Águas do Algarve
Concluded
2011 - 2014 Action Plan for Optimization of Fish Lift built at the Touvedo Hydroelectric Power
Action Plan for Optimization of Fish Lift built at the Touvedo Hydroelectric Power Plant
Researcher
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 EDP
Concluded
2010/01/01 - 2012 Portuguese Atlantic- and Mediterranean-type Rivers under the effects of climate changes: current and historical demography and comparative phylogeography of fishes as a tool for the conservation of critically endangered species
info:eu-repo/grantAgreement/FCT/3599-PPCDT/103110/PT
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2009 - 2012 RICOVER - Rehabilitation of rivers in the Southwest European Space
RICOVER - Rehabilitation of rivers in the Southwest European Space
Researcher
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 European Regional Development Fund
Concluded
2004 - 2011 Evaluation of ecological status of Portuguese rivers (AQUARIPORT)
AQUARIPORT
Post-doc Fellow
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Direcção-Geral dos Recursos Florestais
Concluded
2007 - 2009 Improvement and spatial extension of the European Fish Index
Improvement and spatial extension of the European Fish Index
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 European Commission Sixth Framework Programme
Concluded
2006 - 2009 Migration ecology of Iberian freshwater fish and optimization of the efficacy of fish passes
POCTI/AGR/57175/2004
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2005 - 2008 Impact of forest fires on ecological quality of Monchique stream
POCI/AMB/60266/2004
Post-doc Fellow
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2004 - 2008 Valorisation and restoration of riverside forest in the vicinity of the Odelouca scheme, southwest Portugal
Valorisation and restoration of riverside forest in the vicinity of the Odelouca scheme, southwest Portugal
Post-doc Fellow
Universidade de Lisboa Centro de Estudos Florestais, Portugal
 Águas do Algarve
Concluded
2004 - 2006 Ecological status of surface waters in the Tejo e Oeste River basins
Ecological status of surface waters in the Tejo e Oeste River basins
Post-doc Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Instituto da Água, I. P.
Concluded
2002 - 2005 Development and application of a fish passage for use on weirs and dams of irrigation systems
Development and application of a fish passage for use on weirs and dams of irrigation systems
PhD Student Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Instituto Nacional de Investigação Agrária e Veterinária
2001 - 2003 Ecohydraulic of fish passes at small hydropower plants
Ecohydraulic of fish passes at small hydropower plants
PhD Student Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 DGRF
Concluded
1998 - 2001 Efficacy of fish passes built at small hydropower plants and effects on fish assemblages
Efficacy of fish passes built at small hydropower plants and effects on fish assemblages
PhD Student Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 DGRF
Concluded
1998 - 2000 Establishment of an ecological flow regime on the Lima River, Northern Portugal
Establishment of an ecological flow regime on the Lima River, Northern Portugal
PhD Student Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Instituto de Conservação da Natureza
Concluded
1997 - 2000 Development of an index of biotic integrity for river classification and management
PAMAF 4006/96
Scientific Initiation Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Instituto Nacional de Investigação Agrária e Veterinária
Concluded
1996 - 1999 River classification and assessment of biotic integrity
JNICT- PBIC/C/AGR/2268/95
PhD Student Fellow
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Book
  1. Santos, J.M.; Boavida, Isabel. Integrating Ecohydraulics in River Restoration: Advances in Science and Applications. Switzerland: MDPI. 2020.
    Published
  2. Oliveira, J.M.; Santos, J.M.; Teixeira, A.; Ferreira, M.T.; Pinheiro, P.J.; Geraldes, A.; Bochechas, J.. Projeto AQUARIPORT: Programa Nacional de Monitorização de Recursos Piscícolas e de Avaliação da Qualidade Ecológica de Rios. Portugal: Direcção-Geral dos Recursos Florestais. 2007.
    Published
Book chapter
  1. Ordeix, M.; González, G.; Sanz-Ronda, F.J.; Santos, J.M.. "Restoring fish migration in the rivers of the Iberian Peninsula". edited by Brink, K.; Gough, P.; Royte, J.; Schollema, P.P.; Wanningen, H., 174-177. Groningen, Netherlands: World Fish Migration Foundation, 2018.
    Published
Conference abstract
  1. Filipe, Ana Filipa; Santos, J.M.; Branco, Paulo; de Melo, Maria Teresa C; Proença de Oliveira, Rodrigo; Fernandes, Susana; Alves, Maria Helena; et al. "Climate-Change-Proof Riverine Ecosystems for Sustainable Management: The AQUADAPT Project". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published
  2. Duarte, Gonçalo; Costa, Maria João; Segurado, Pedro; Teixeira, Afonso; Santos, J.M.; Ferreira, Maria Teresa; Branco, Paulo. "The Red List Threats to European Freshwater Fishes—Spatial Patterns and Knowledge Gaps". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013109
  3. Branco, Paulo; Borgwardt, Florian; O’Hanley, Jesse; Figueira, Rui; Duarte, Gonçalo; Santos, J.M.; Segurado, Pedro; Leite, Tamara; Ferreira, Maria T.. "Dammed Fish: Impact of Structural and Functional River Network Connectivity Losses on Fish Biodiversity—Optimizing Management Solutions". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013119
  4. Branco, Paulo; Segurado, Pedro; Santos, J.M.; Amaral, Susana D.; Duarte, Gonçalo; Romão, Filipe; Leite, Tamara; Pinheiro, António; Ferreira, Maria T.. "River Network Connectivity—An Holistic Approach to Improve the Sustainability of Fish Populations". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013105
  5. Boavida, Isabel; Santos, J.M.; Costa, Maria João; Leite, Renan; Merianne, Anthony; Portela, Maria Manuela; Godinho, Francisco; et al. "EcoPeak4Fish: A Multidisciplinary Project Targeting the Protection of Fish Populations Affected by Hydropeaking". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013085
  6. Leite, Renan; Costa, Maria João; Merianne, Anthony; Mameri, Daniel; Santos, J.M.; Pinheiro, Antonio Nascimento; Boavida, Isabel. "A Matter of Approach: Analysis of the Flow Refuge Preferences of Iberian Barbels during Pulsed Flows in Flume Conditions". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013086
  7. Mameri, Daniel; Rivaes, Rui; Ferreira, Maria Teresa; Schmutz, Stefan; Santos, J.M.. "Should I Stay or Should I Go? Fish Passability in a Rock Weir (Tagus River) under Climate Change Scenarios". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013081
  8. Leite, Tamara; Branco, Paulo; Canhoto, Cristina; Ferreira, Maria Teresa; Santos, J.M.. "Effects of River Salinization on Freshwater Fish Behavior—Cerebral Lateralization, Activity, Boldness, and Schooling". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013077
  9. Branco, Paulo; Vieira, Inês; Oliveira, Margarida; Leite, Tamara; Santos, J.M.. "Effects of a Pyrethroid Pesticide on the Behaviour of Native and Non-Native Cypriniformes Fish". Paper presented in The IX Iberian Congress of Ichthyology, Porto, 2022.
    Published • 10.3390/blsf2022013063
  10. Amaral, S.; Branco, P.; Katopodis, C.; Quaresma, A.L.; Romão, Filipe; Viseu, T.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Passage of small instream obstacles by potamodromous fish: main findings and implications from experimental research". Paper presented in 13th International Symposium on Ecohydraulics, Lyon, 2020.
    Accepted
Conference paper
  1. Santos, J.M.; Leite, R.; Costa, M.J.; Godinho, FN.; Portela, M.M.; Pinheiro, A.N. "Can hydropeaking by small hydropower plants affect fish microhabitat use?". Paper presented in 12th ICOLD European Club Symposium 2023, Interlaken, 2023.
    Published
  2. Amaral, S.D.; Branco, P.; Romão, F.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Effect of Discharge and Retrofitting Options of Low-Head Ramped Weir on Passage Performance of a Potamodromous Cyprinid Fish". Paper presented in 39th IAHR World Congress, Granada, 2022.
    Published
  3. Branco, P.; Mascarenhas, A.; Duarte, G.; Romão, F.; Amaral, S.D.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Meta-analizing vertical slot fishways: what is the best design?". Paper presented in 39th IAHR World Congress, Granada, 2022.
    Published
  4. Boavida, I.; Santos, J.M.; Costa, M.J.; Leite, R.; Portela, M.M.; Godinho, F.N.; Leitão, P.; et al. "The EcoPeak4Fish project: an integrated approach to support self-sustaining fish populations downstream hydropower plants". Paper presented in 39th IAHR World Congress, Granada, 2022.
    Published
  5. Amaral, S.D.; Branco, P.; Quaresma, A.L.; Romão, F.; Viseu, T.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Efeito de pequenos açudes nos movimentos das espécies ciprinícolas potamódromas". Paper presented in 15º Congresso da Água, 2021.
    Published
  6. Amaral, S.D.; Branco, P.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Transponibilidade de um açude experimental rampeado por ciprinídeos potamódromos: efeito do comprimento e declive da rampa". Paper presented in 14º Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa, Praia, 2019.
    Published
  7. Amaral, S.D.; Branco, P.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "The effect of slope and ramp length on the upstream passage performance of potamodromous cyprinids negotiating low-head ramped weirs". Paper presented in 38th IAHR World Congress, Panama City, 2019.
    Published
  8. Romão, F.; Quaresma, AL; Branco, P.; Santos, J.M.; Amaral, SD; Ferrreira, MT; Pinheiro, AN. "Desempenho de passagem de ciprinídeos Ibéricos com diferentes traços ecológicos numa passagem para peixes experimental de fendas verticais com configurações distintas". Paper presented in 14º Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa, Praia, 2019.
    Published
  9. Santos, J.M.; Rivaes, R.; Boavida, I.; Branco, P.. "Microhabitat use of endemic cyprinids as a tool to inform river restoration in Mediterranean regions". Paper presented in 12th International Symposium on Ecohydraulics, Tokyo, 2018.
    Published
  10. Romão, F.; Quaresma, A.L.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.. "Single- or multi-slot fishways in Mediterranean rivers? An experimental approach with a potamodromous cyprinid fish". Paper presented in 12th International Symposium on Ecohydraulics, Tokyo, 2018.
    Published
  11. Amaral, S.D.; Branco, Paulo; Katopodis, Christos; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Negotiation of small weirs by potamodromous cyprinids: the effect of key hydraulic parameters". Paper presented in 3rd International Conference I.S. Rivers – Integrative sciences and sustainable development of rivers, Lyon, 2018.
    Published
  12. Santos, J.M.; Oliveira, J.; Rivaes, R.; Arenas, R.; Ferreira, M.T.; Cabral, U.; Marinho, A.L.; et al. "Plano de ação para a otimização do ascensor de peixes do aproveitamento hidroelétrico de Touvedo – Resultados finais". Paper presented in 14º Congresso da Água, Évora, 2018.
    Published
  13. Amaral, S.D.; Branco, P.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Influência da profundidade, altura da água e caudal no comportamento de transposição de peixes potamódromos através de açudes de faces verticais". Paper presented in 14º Congresso da Água, Évora, 2018.
    Published
  14. Rivaes, R.; Boavida, I.; Santos, J.M.; Pinheiro, A.N.; Ferreira, M.T.. "Caudais ecológicos em Portugal: consideração dos requisitos da vegetação ripária para assegurar a sustentabilidade das comunidades aquáticas". Paper presented in 13º Congresso da Água, Lisboa, 2016.
    Published
  15. Oliveira, J.M.; Ferreira, M.T.; Duarte, G.; Santos, J.M.; Mariano, A.; Ferreira, J.; Martins, J.; Bochechas, J.. "Apresentação da aplicação Web para o cálculo do índice piscícola para rios vadeáveis portugueses (F-IBIP)". Paper presented in 13º Congresso da Água, Lisboa, 2016.
    Published
  16. Amaral, S.D.; Branco, P.; Silva, A.T.; Viseu, T.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Desempenho natatório de uma espécie potamódromas através de um açude experimental sujeito a variações de profundidade e altura de queda de água". Paper presented in 13º Congresso da Água, Lisboa, 2016.
    Published
  17. Santos, J.M.; Branco, P.; Amaral, S.D.; Silva, A.T.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.N.; Viseu, T.. "Projeto FISHMOVE – Desenvolvimento de medidas de mitigação para pequenas barreiras à migração de peixes dulçaquícolas em rios Portugueses". Paper presented in 13º Congresso da Água, Lisboa, 2016.
    Published
  18. Santos, J.M.; Oliveira, J.M.; Rivaes, R.; Ferreira, M.T.; Pádua, J.. "Improvement of yellow eels'movements through fish lifts". Paper presented in 11th International Symposium on Ecohydraulics, Melbourne, 2016.
    Published
  19. Branco, P.; Santos, J.M.; Amaral, S.D.; Romão, F.; Pinheiro, A.N.; Ferreira, M.T.. "Potamodromous fish responses to multiple stressors: water scarcity and oxygen depletion". Paper presented in 11th International Symposium on Ecohydraulics, Melbourne, 2016.
  20. Branco, P.; Santos, J.M.; Segurado, P.; Ferreira, M.T.. "Measuring longitudinal river network connectivity". Paper presented in 11th International Symposium on Ecohydraulics, Melbourne, 2016.
    Published
  21. Amaral, S.D.; Branco, P.; Silva, A.T.; Katopodis, C.; Viseu, T.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Performance of a potamodromous cyprinid negotiating a small weir". Paper presented in 11th International Symposium on Ecohydraulics, Melbourne, 2016.
    Published
  22. Branco, P.; Santos, J.M.; Katopodis, C.; Viseu, T.; Ferreira, M.T.; Pinheiro, A.N.. "The influence of bottom rugosity on the performance of upstream fish movements through a pool-type fishway under different discharges". Paper presented in 36th IAHR World Congress, Delft, 2015.
    Published
  23. Rivaes, Rui Pedro; Santos, J.M.; Boavida, Isabel; Pinheiro, António; Maria Teresa Ferreira. "A more embracing approach on environmental flow science - adding riparian requirements into consideration.". Paper presented in 10th Symposium on Ecohydraulics, Trondheim, 2014.
    Published
  24. Santos, J.M.; Branco, P.; Silva, A.T.; Katopodis, C.; Pinheiro, A.N.; Ferreira, M.T.. "Effects of substrate and flow discharge on passage by Iberian barbel (L. bocagei) in an experimental pool-type fishway". Paper presented in 10th International Symposium on Ecohydraulics, Throndheim, 2014.
    Published
  25. Santos, J.M.; Oliveira, J.M.; Rivaes, R.; Arenas, R.; Ferreira, M.T.; Pádua, J.. "Migration patterns of European yellow eels (Anguilla anguilla) through a fish lift". Paper presented in 10th International Symposium on Ecohydraulics, Throndheim, 2014.
    Published
  26. Rivaes, R.; Santos, J.M.; Boavida, I.; Pinheiro, A.N.; Ferreira, M.T.. "Towards an hollistic approach on environmental flow science - adding riparian requirements into consideration". Paper presented in 10th International Symposium on Ecohydraulics, Throndheim, 2014.
    Published
  27. Boavida, I.; Dias, V.; Ferreira, M.T.; Santos, J.M.. "Data-driven approaches and fuzzy-logic: Which one to choose?". Paper presented in 10th International Symposium on Ecohydraulics, Throndheim, 2014.
    Published
  28. Santos, J.M.; Branco, P.; Viseu, T.; Pinheiro, A.N.; Ferreira, M.T.. "Colocação de substratos artificiais em passagens para peixes do tipo bacias sucessivas: efeitos da densidade e do caudal". Paper presented in 12º Congresso da Água, Lisboa, 2014.
    Published
  29. Boavida, I.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.. "Modelação dos habitats piscícolas com recurso a curvas de preferência e à lógica fuzzy". Paper presented in 12º Congresso da Água, Lisboa, 2014.
    Published
  30. Branco, P.; Santos, J.M.; Viseu, T.; Pinheiro, A.N.; Ferreira, M.T.. "Qual o melhor regime de escoamento em passagens para peixes por bacias sucessivas?". Paper presented in 12º Congresso da Água, Lisboa, 2014.
    Published
  31. Santos, J.M.; Pádua, J.; Oliveira, J.M.; Rivaes, R.; Arenas, R.; Cabral, U.; Ferreira, M.T.; Marinho, A.L.. "Ascensor para peixes de Touvedo: padrões de utilização piscícola e eficácia". Paper presented in 12º Congresso da Água, Lisboa, 2014.
    Published
  32. Cabral, U.; Marinho, A.L.; Branco, E.; Santos, J.M.; Pádua, J.. "Fish lift performance for upstream fish passage at a large hydroelectric power plant in Touvedo, Portugal". Paper presented in Hydro 2013 - promoting the versatile role of hydro, Innsbruck, 2013.
    Published
  33. Boavida, I.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.. "Fish Habitat response to hydropeaking". Paper presented in 35th IAHR World Congress, Chengdu, 2013.
    Published
  34. Branco, P.; Segurado, P.; Santos, J.M.; Ferreira, M.T.. "Upscaling fish habitat suitability to the basin scale using boosted regression trees". Paper presented in 35th IAHR World Congress, Chengdu, 2013.
  35. Silva, A.T.; Katopodis, C.; Tachie, M.F.; Santos, J.M.; Ferreira, M.T.. "Movement behaviour of the European Eel (Anguilla anguilla) and Iberian Barbel (Luciobarbus bocagei) during downstream passage over a spillway". Paper presented in 21st Canadian Hydrotechnical Conference, Banff, 2013.
    Published • 10.1109/coa.2016.7535791
  36. Boavida, I.; Santos, J.M.; Cortes, R.V.; Ferreira, M.T.; Pinheiro, A.N.. "A importância do troço de referência para a requalificação fluvial". Paper presented in 11º Congresso da Água, Porto, 2012.
    Published
  37. Santos, J.M.; Reino, L.; Porto, M.; Oliveira, J.M.; Pinheiro, P.J.; Almeida, P.R.; Cortes, R.V.; Ferreira, M.T.. "How do multi-scale environmental gradients affect distribution of potamodromous cyprinid fish?". Paper presented in 5th International Perspective on Water Resources & The Environment, Marrakech, 2012.
    Published
  38. Santos, J.M.; Branco, P.; Silva, A.T.; Ferreira, M.T.; Katopodis, C.; Pinheiro, A.N.; Viseu, T.. "Does the relative depth of flow influence fish passage in pool-type fishways?". Paper presented in Euromech Colloquium 523, Clermont-Ferrand, 2011.
    Published
  39. Branco, P.; Silva, A.T.; Santos, J.M.; Ferreira, M.T.; Viseu, T.; Katopodis, C.; Pinheiro, A.N.. "Substrate density influences fish passage success in pool-type fishways". Paper presented in Euromech Colloquium 523, Clermont-Ferrand, 2011.
    Published
  40. Boavida, I.; Pinheiro, A.N.; Santos, J.M.; Ferreira, M.T.. "Does boulder placement improve habitat for stream fish?". Paper presented in Euromech Colloquium 523, Clermont-Ferrand, 2011.
    Published
  41. Mendes, A.I.; Ferreira, M.T.; Albuquerque, A.; Almeida, M.H.; Berjano, M.; Camprodon, J.; Cruz, P.; et al. "Project RICOVER: River Recovery in the SUDOE Region". Paper presented in 7th European Conference on Ecological Restoration, Avignon, 2010.
    Published
  42. Oliveira, J.M.; Cortes, R.; Teixeira, A.; Santos, J.M.; Pinheiro, P.J.; Ferreira, M.T.; Bochechas, J.; Ferreira, J.; Pádua, J.. "A qualidade das bases de dados como factor crucial em estudos ambientais: condições de referência e tipologia de base piscícola para rios portugueses". Paper presented in 10º Congresso da Água, Alvor, 2010.
    Published
  43. Santos, J.M.; Pinheiro, P.J.; Ferreira, M.T.; Bochechas, J.. "Monitoring seasonal and daily upstream movements of coarse fish through a fish pass using infrared technology". Paper presented in 33rd IAHR World Congress, Vancouver, 2009.
    Published
  44. Boavida, I.; Santos, J.M.; Cortes, R.; Pinheiro, A.N.; Ferreira, M.T.. "Cumulative effect of enhancement measures to improve habitat of an endangered fish, the Iberian nase (Iberochondrostoma almacai)". Paper presented in 33rd IAHR World Congress, Vancouver, 2009.
    Published
  45. Boavida, I.; Santos, J.M.; Lourenço, J.; Cortes, R.; Ferreira, M.T.; Pinheiro, A.N.. "Using a two dimensional approach to evaluate channel rehabilitation in a mediterranean stream (southern Portugal)". Paper presented in 4th ECRR Conference on River Restoration, Venice, 2008.
    Published
  46. Boavida, I.; Santos, J.M.; Cortes, R.; Ferreira, M.T.; Pinheiro, A.N.. "Determinação de caudais ecológicos com recurso à modelação bidimensional. O caso da ribeira de Odelouca". Paper presented in 9º Congresso da Água, Cascais, 2008.
    Published
  47. Aguiar, F.C; Ferreira, M.T.; Rodríguez-González, Patricia María; Albuquerque, A.; Sérgio, C.; Santos, J.M.. "Flora Macrofítica como Indicadora da Qualidade Ecológica de Sistemas Fluviais Portugueses". Paper presented in 8º Congresso da Água - Sede de sustentabilidade, Figueira da Foz, 2006.
    Published
  48. Silva, A.T.; Franco, A.C.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.; Melo, J.F.; Bochechas, J.. "Padrões comportamentais do barbo Ibérico Barbus bocagei num protótipo experimental de uma passagem para peixes por bacias sucessivas". Paper presented in 8º Congresso da Água, Figueira da Foz, 2006.
    Published
  49. Aguiar, F.C.; Ferreira, M.T.; González, P.R.; Albuquerque, A.; Sérgio, C.; Santos, J.M.. "Flora macrofítica como indicadora da qualidade ecológica de sistemas fluviais portugueses". Paper presented in 8º Congresso da Água, Figueira da Foz, 2006.
    Published
  50. Pinheiro, P.J.; Santos, J.M.; Ferreira, M.T.. "Utilização de diferentes metodologias na avaliação da funcionalidade de passagens para peixes em Portugal". Paper presented in 5º Congresso Florestal Nacional, Viseu, 2005.
    Published
  51. Silva, A.T.; Ferreira, M.T.; Santos, J.M.; Pinheiro, A.N.; Melo, J.F.; Bochechas, J.. "Development of a pool-type fishway facility for Iberian cyprinids". Paper presented in 5th International Symposium on Ecohydraulics, Madrid, 2004.
    Published
  52. Pinheiro, P.J.; Santos, J.M.; Ferreira, M.T.; Bochechas, J.. "Utilização de radio-telemetria no estudo de selecção de habitat do barbo comum (Barbus bocagei) no rio Alva". Paper presented in 7º Congresso da Água, Lisboa, 2004.
    Published
  53. Pinheiro, P.J.; Santos, J.M.; Ferreira, M.T.; Bochechas, J.. "Avaliação da eficiência das passagens para peixes através de detectores de infravermelhos. Riverwatcher: um caso de estudo". Paper presented in II Simpósio sobre Aproveitamentos Hidroeléctricos Hidroelectricidade e Ambiente: Equilíbrio e Sustentabilidade, Vila Real, 2003.
    Published
Conference poster
  1. Branco, P.; Borgwardt, F.; O'Hanley, J.; Figueira, R.; Duarte, G.; Santos, J.M.; Segurado, P.; Leite, T.; Ferreira, M.T.. "Dammed Fish: Impact of Structural and Functional River Network Connectivity Losses on Fish Biodiversity - Optimizing Management Solutions". Paper presented in SEFS 13, 2023.
  2. Branco, P.; Borgwardt, F.; O‘Hanley, J.; Figueira, R.; Duarte, G.; Santos, J.M.; Segurado, P.; Leite, T.; Ferrira, M.T.. "Dammed Fish - Impact of structural and functional river network connectivity losses on fish biodiversity - Optimizing management solutions". Paper presented in 36th Congress of the International Society of Limnology, 2022.
  3. Filipe, A.F.; Santos, J.M.; Branco, P.; Melo, M.T.C.; Oliveira, R.P.; Fernandes, S.; Alves, M.H.; et al. "AQUADAPT Project: Promoting resilience to climate change for a sustainable management in Inland Portugal". Paper presented in 2nd Meeting of the Iberian Ecological Society (SIBECOL), 2022.
  4. Mameri, D.; Hayes, D.S.; Fuehrer, S.; Fauchery, E.; Schmutz, S.; Monserat, A.; Hasler, T.; et al. "Cold thermopeaking-induced drift in nase Chondrostoma nasus larvae". Paper presented in 4th International Conference I.S.Rivers, 2022.
  5. Filipe, Ana Filipa; Santos, J.M.; Branco, Paulo; de Melo, Maria Teresa C; Proença de Oliveira, Rodrigo; Fernandes, Susana; Alves, Maria Helena; et al. "Climate-Change-Proof Riverine Ecosystems for Sustainable Management: The AQUADAPT Project". Paper presented in IX Iberian Congress of Ichthyology, 2022.
    10.3390/blsf2022013136
  6. Branco, P.; Borgwardt, F.; O’Hanley, J.; Figueira, R.; Duarte, G.; Santos, J.M.; Segurado, P.; Leite, T.; Ferreira, M.T.. "Dammed Fish: Impact of Structural and Functional River Network Connectivity Losses on Fish Biodiversity—Optimizing Management Solutions". Paper presented in IX Iberian Congress of Ichthyology, 2022.
  7. Mameri, Daniel; Rivaes, Rui; Oliveira, J.M.; Ferreira, M.T.; Santos, J.M.. "Passability of native potamodromous fish species through a fish lift in North Portugal, in relation to different hydropeaking scenarios". Paper presented in EEF 2019 – European Ecology Federation, 2019.
  8. Amaral, S.D.; Branco, P.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Passage behaviour of potamodromous cyprinids facing a small experimental weir: Passage by swimming or jumping?". Paper presented in 12th International Symposium on Ecohydraulics, 2018.
  9. Calapez, A.R.; Serra, S.R.Q.; Santos, J.M.; Branco, P.; Ferreira, M.T.; Hein, T.; Brito, A.G.; Feio, M.J.. "Macroinvertebrate functional responses to multiple stressor gradients of water scarcity and oxygen depletion: a trait-based approach in mesocosm". Paper presented in XIX Conference of the Iberian Association of Limnology, 2018.
  10. Santos, J.M.; Gonino, G.; Figueiredo, B.; Manetta, G.; Benedito, E.. "Native and non-native fish response to the effects of sugarcane ash runoff on neotropical streams". Paper presented in 7th Iberian Congress of Ichthyology – where rivers meed the ocean, 2018.
  11. Romão, F.; Branco, P.J.; Quaresma, A.L.; Santos, J.M.; Amaral, S.D.; Ferreira, M.T.; Viseu, T.; Katopodis, C.; Pinheiro, A.N.. "Performance of two different morpho-ecological cyprinids in a fishway with distinct vertical slot configurations". Paper presented in 10th Symposium for European Freshwater Sciences, 2017.
  12. Santos, J.M.; Amaral, S.D.; Branco, P.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.N.. "Swimming or jumping? Passage behaviour of a potamodromous cyprinid upon negotiating an experimental weir subjected to different design configurations". Paper presented in 10th Symposium for European Freshwater Sciences, 2017.
  13. Sousa-Santos, C.; Robalo, J.I.; Pereira, A.M.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Doadrio, I.. "Landscape features and species’ intrinsic traits shape the contemporary patterns of genetic diversity of Portuguese endemic cyprinids". Paper presented in 10th Symposium for European Freshwater Sciences, 2017.
  14. Sousa-Santos, C.; Robalo, J.I.; Pereira, A.M.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Doadrio, I.. "Factors shaping contemporary patterns of genetic diversity of the Portuguese endemic cyprinids". Paper presented in International Meeting on Marine Research, 2016.
  15. Santos, J.M.; Oliveira, J.M.; Rivaes, Rui; Arenas, R.; Ferreira, M.T.; Cabral, U.; Leite Marinho, A.; et al. "Otimização do ascensor de peixes do aproveitamento hidroelétrico de Touvedo". Paper presented in 13º Congresso da Água, 2016.
  16. Calapez, A.R.; Santos, J.M.; Branco, P.; Feio, M.J.; Ferreira, M.T.. "Macroinvertebrate short-term response to flow variation and oxygen depletion pulses in Mediterranean rivers – a mesocosm approach". Paper presented in XVIII Congress of the Iberian Society of Limnology, 2016.
  17. Santos, J.M.; Branco, P.; Katopodis, C.; Pinheiro, A.N.; Ferreira, M.T.. "Assessment of a retrofitted pool-type fishway model to improve upstream movements of a potamodromous benthic cyprinid". Paper presented in Fish Passage 2015 -International conference on river connectivity best practices and innovations, 2015.
  18. Sousa-Santos, C.; Robalo, J.I.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Castilho, R.; Ramos, A.; Doadrio, I.. "Global genetic diversity of native cyprinids in the Iberian Peninsula". Paper presented in 5th Iberian Congress of Icthyology – Know to preserve, 2014.
  19. Santos, J.M.; Branco, P.; Ferreira, M.T.; Katopodis, C.; Pinheiro, A.N.; Silva, A.T.; Viseu, T.. "Does boulder density and flow discharge influence cyprinid fish performance in pool-type fishways?". Paper presented in 8th Symposium for European Freshwater Sciences, 2013.
  20. Sousa-Santos, C.; Robalo, J.I.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Castilho, R.; et al. "Projecto FISHATLAS: demografia actual e histórica e filogeografia comparada de peixes da península Ibérica, como instrumento para a conservação de espécies ameaçadas". Paper presented in IV Jornadas Ibéricas de Ictiologia: situación actual y retos de futuro, 2012.
  21. Santos, J.M.; Branco, P.; Silva, A.T.; Katopodis, C.; Viseu, T.; Pinheiro, A.N.; Ferreira, M.T.. "Does substrate density influences fish passage success in pool-type fishways?". Paper presented in XVI Congress of the Iberian Association of Limnology, 2012.
  22. Santos, J.M.; Branco, P.; Silva, A.T.; Katopodis, C.; Pinheiro, A.N.; Ferreira, M.T.. "Efeitos da colocação de substratos artificiais nos movimentos de Luciobarbus bocagei numa passagem para peixes". Paper presented in XVI Congress of the Iberian Association of Limnology, 2012.
  23. Sousa-Santos, C.; Robalo, J.I.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Castilho, R.; et al. "FISHATLAS Project: population genetics as a tool for the conservation of endangered species". Paper presented in Conference on the Ecology and Conservation of Freshwater Fish, 2012.
  24. Santos, J.M.; Branco, P.; Silva, A.T.; Katopodis, C.; Pinheiro, A.N.; Ferreira, M.T.. "Does the relative depth of flow influence fish passage in pool-type fishways?". Paper presented in Euromech Ecohydraulics: linkages between hydraulics, morphodynamics and ecological processes in rivers, 2011.
  25. Branco, P.; Silva, A.T.; Santos, J.M.; Katopodis, C.; Pinheiro, A.N.; Ferreira, M.T.. "Substrate density influences fish passage success in pool-type fishways". Paper presented in Euromech Ecohydraulics: linkages between hydraulics, morphodynamics and ecological processes in rivers, 2011.
  26. Branco, P.; Segurado, P.; Santos, J.M.; Pinheiro, A.N.; Ferreira, M.T.. "Is the distribution of potamodromous and native Iberian fish affected by artificial barriers?". Paper presented in 140th meeting of the American Fisheries Society, 2010.
  27. Branco, P.; Segurado, P.; Santos, J.M.; Pinheiro P.J.; Ferreira, M.T.. "Are fish species distributions affected by artificial barriers?". Paper presented in 140th American Fisheries society, 2010.
  28. Mendes, A.; Ferreira, M.T.; Albuquerque, A.; Almeida, M.H.; Berjano, M.; Camprodon, J.; Cruz, P.; et al. "Project RICOVER: River Recovery in the SUDOE Region". Paper presented in 7th European Conference on Ecological Restoration, 2010.
  29. Aguiar, F.C.; Ferreira, M.T.; Albuquerque, A.; González, P.R.; Santos, J.M.. "Can we use river plants in ecological quality assessment?". Paper presented in International Symposium: Assessing the Ecological Status of Rivers, Lakes and Transitional Waters, 2008.
  30. Santos, J.M.; Ferreira, M.T.. "Seasonal microhabitat use by two endangered Iberian cyprinids in Southwest Portugal". Paper presented in 4th European Centre for River Restoration International Conference, 2008.
  31. Santos, J.M.; Ferreira, M.T.; Godinho, F.N.. "Estrutura etária e crescimentos das espécies piscícolas endémicas e exóticas mais frequentes no Baixo Guadiana". Paper presented in I Congresso Ibérico de Limnologia (IX Congreso Español de Limnología), 1998.
Journal article
  1. Romão, Filipe; Quaresma, Ana L.; Simão, Joana; Bravo-Córdoba, Francisco J.; Viseu, Teresa; Santos, J.M.; Sanz-Ronda, Francisco J.; Pinheiro, António N.. "Debating the Rules: An Experimental Approach to Assess Cyprinid Passage Performance Thresholds in Vertical Slot Fishways". Water 16 3 (2024): 439. http://dx.doi.org/10.3390/w16030439.
    Open access • Published • 10.3390/w16030439
  2. Santos, J.M.; Leite, Renan; Costa, Maria J.; Godinho, Francisco; Portela, Maria M.; Pinheiro, António N.; Boavida, Isabel. "Seasonal and Size-Related Fish Microhabitat Use Upstream and Downstream from Small Hydropower Plants". Water 16 1 (2023): 37. http://dx.doi.org/10.3390/w16010037.
    Open access • Published • 10.3390/w16010037
  3. Branco, Paulo; Mascarenhas, Ana Margarida; Duarte, Gonçalo; Romão, Filipe; Quaresma, Ana; Amaral, Susana Dias; Ferreira, Maria Teresa; Pinheiro, António N.; Santos, J.M.. "Vertical Slot Fishways: Incremental Knowledge to Define the Best Solution". Biology 12 11 (2023): 1431. http://dx.doi.org/10.3390/biology12111431.
    Open access • Published • 10.3390/biology12111431
  4. Leite, Tamara; Mameri, Daniel; Branco, Paulo; Vieira, Inês; Oliveira, Margarida; Santos, J.M.. "Swimming under Pressure: The Sub-Lethal Effects of a Pesticide on the Behaviour of Native and Non-Native Cypriniformes Fish". Fishes 8 9 (2023): 462. http://dx.doi.org/10.3390/fishes8090462.
    Open access • Published • 10.3390/fishes8090462
  5. Mameri, D.; Hayes, D. S.; Führer, S.; Fauchery, E.; Schmutz, S.; Monserat, A.; Hasler, T.; et al. "Cold thermopeaking-induced drift of nase Chondrostoma nasus larvae". Aquatic Sciences 85 2 (2023): http://dx.doi.org/10.1007/s00027-023-00955-x.
    Published • 10.1007/s00027-023-00955-x
  6. Godinho, Francisco N.; Alexandre, Carlos; Almeida, Pedro R.; Martínez-Capel, Francisco; Cortes, Rui M. V.; Quintella, Bernardo R.; Sanz-Ronda, Javier; et al. "Hydropeaking impact assessment for Iberian cyprinids and leuciscids: An adaptation of the hydropeaking tool method". River Research and Applications 39 3 (2023): 340-348. http://dx.doi.org/10.1002/rra.3943.
    Published • 10.1002/rra.3943
  7. Leite, Tamara; Branco, Paulo; Ferreira, Maria Teresa; Santos, José Maria. "Activity, boldness and schooling in freshwater fish are affected by river salinization". Science of The Total Environment 819 (2022): 153046. http://dx.doi.org/10.1016/j.scitotenv.2022.153046.
    Published • 10.1016/j.scitotenv.2022.153046
  8. Santos, José Maria; Amaral, S.D.; Pádua, J.. "Can fish lifts aid upstream dispersal of the invasive red swamp crayfish (Procambarus clarkii) past high-head hydropower plants?". River Research and Applications 38 8 (2022): 1519-1523. http://dx.doi.org/10.1002/rra.3856.
    Published • 10.1002/rra.3856
  9. Mameri, Daniel; Rivaes, Rui; Ferreira, Maria Teresa; Schmutz, Stefan; Santos, José Maria. "Climate Change Effects on Fish Passability across a Rock Weir in a Mediterranean River". Water 13 19 (2021): 2758. http://dx.doi.org/10.3390/w13192758.
    Open access • Published • 10.3390/w13192758
  10. Vilizzi, Lorenzo; Copp, Gordon H.; Hill, Jeffrey E.; Adamovich, Boris; Aislabie, Luke; Akin, Daniel; Al-Faisal, Abbas J.; et al. "A global-scale screening of non-native aquatic organisms to identify potentially invasive species under current and future climate conditions". Science of The Total Environment 788 (2021): 147868. http://dx.doi.org/10.1016/j.scitotenv.2021.147868.
    Published • 10.1016/j.scitotenv.2021.147868
  11. Branco, Paulo; Segurado, Pedro; Costa, Maria João; Teixeira, Afonso; Santos, José Maria; Ferreira, Maria Teresa; Duarte, Gonçalo. "Knowledge Gaps in the Definition of Threats for the Red List Assessment of European Freshwater-Dependent Fish Species". Biology 10 7 (2021): 680. http://dx.doi.org/10.3390/biology10070680.
    Open access • Published • 10.3390/biology10070680
  12. Amaral, Susana D.; Branco, Paulo; Romão, Filipe; Ferreira, Maria Teresa; Pinheiro, António N.; Santos, J.M.. "Evaluation of Low-Head Ramped Weirs for a Potamodromous Cyprinid: Effects of Substrate Addition and Discharge on Fish Passage Performance, Stress and Fatigue". Water 13 6 (2021): 765. http://dx.doi.org/10.3390/w13060765.
    Published • 10.3390/w13060765
  13. Romão, Filipe; Quaresma, Ana L.; Santos, José M.; Amaral, Susana D.; Branco, Paulo; Pinheiro, António N.. "Multislot Fishway Improves Entrance Performance and Fish Transit Time over Vertical Slots". Water 13 3 (2021): 275. http://dx.doi.org/10.3390/w13030275.
    Open access • Published • 10.3390/w13030275
  14. Copp, Gordon H.; Vilizzi, Lorenzo; Wei, Hui; Li, Shan; Piria, Marina; Al-Faisal, Abbas J.; Almeida, David; et al. "Speaking their language – Development of a multilingual decision-support tool for communicating invasive species risks to decision makers and stakeholders". Environmental Modelling & Software 135 (2021): 104900. http://dx.doi.org/10.1016/j.envsoft.2020.104900.
    10.1016/j.envsoft.2020.104900
  15. Mitsopoulos, George; Theodoropoulos, Christos; Papadaki, Christina; Dimitriou, Elias; Santos, José Maria; Zogaris, Stamatis; Stamou, Anastasios. "Model-based ecological optimization of vertical slot fishways using macroinvertebrates and multispecies fish indicators". Ecological Engineering 158 (2020): 106081. http://dx.doi.org/10.1016/j.ecoleng.2020.106081.
    Published • 10.1016/j.ecoleng.2020.106081
  16. Mameri, Daniel; Branco, Paulo; Ferreira, Maria Teresa; Santos, José Maria. "Heatwave effects on the swimming behaviour of a Mediterranean freshwater fish, the Iberian barbel Luciobarbus bocagei". Science of The Total Environment 730 (2020): 139152. http://dx.doi.org/10.1016/j.scitotenv.2020.139152.
    Published • 10.1016/j.scitotenv.2020.139152
  17. Birk, Sebastian; Chapman, Daniel; Carvalho, Laurence; Spears, Bryan M.; Andersen, Hans Estrup; Argillier, Christine; Auer, Stefan; et al. "Impacts of multiple stressors on freshwater biota across spatial scales and ecosystems". Nature Ecology & Evolution (2020): http://dx.doi.org/10.1038/s41559-020-1216-4.
    Published • 10.1038/s41559-020-1216-4
  18. Santos, José Maria; Ferreira, Maria Teresa. "Use of Aquatic Biota to Detect Ecological Changes in Freshwater: Current Status and Future Directions". Water 12 6 (2020): 1611. http://dx.doi.org/10.3390/w12061611.
    Published • 10.3390/w12061611
  19. Silva, Ana T.; Bermúdez, María; Santos, J.M.; Rabuñal, Juan R.; Puertas, Jerónimo. "Pool-Type Fishway Design for a Potamodromous Cyprinid in the Iberian Peninsula: The Iberian Barbel—Synthesis and Future Directions". Sustainability 12 8 (2020): 3387. http://dx.doi.org/10.3390/su12083387.
    Published • 10.3390/su12083387
  20. Mameri, Daniel; Rivaes, Rui; Oliveira, João M.; Pádua, João; Ferreira, Maria T.; Santos, José M.. "Passability of Potamodromous Species through a Fish Lift at a Large Hydropower Plant (Touvedo, Portugal)". Sustainability 12 1 (2020): 172. http://dx.doi.org/10.3390/su12010172.
    Published • 10.3390/su12010172
  21. Amaral, Susana D.; Quaresma, Ana L.; Branco, Paulo; Romão, Filipe; Katopodis, Christos; Ferreira, Maria T.; Pinheiro, António N.; Santos, José M.. "Assessment of Retrofitted Ramped Weirs to Improve Passage of Potamodromous Fish". Water 11 12 (2019): 2441. http://dx.doi.org/10.3390/w11122441.
    Open access • Published • 10.3390/w11122441
  22. Hayes, Daniel S.; Branco, Paulo; Santos, José Maria; Ferreira, Teresa. "Oxygen Depletion Affects Kinematics and Shoaling Cohesion of Cyprinid Fish". Water 11 4 (2019): 642. http://dx.doi.org/10.3390/w11040642.
    Open access • Published • 10.3390/w11040642
  23. Amaral, Susana; Branco, Paulo; Katopodis, Christos; Ferreira, Maria; Pinheiro, António; Santos, José. "Passage Performance of Potamodromous Cyprinids over an Experimental Low-Head Ramped Weir: The Effect of Ramp Length and Slope". Sustainability 11 5 (2019): 1456. http://dx.doi.org/10.3390/su11051456.
    Open access • Published • 10.3390/su11051456
  24. Gonino, Gabriel; Branco, Paulo; Benedito, Evanilde; Ferreira, Maria Teresa; Santos, José M.. "Short-term effects of wildfire ash exposure on behaviour and hepatosomatic condition of a potamodromous cyprinid fish, the Iberian barbel Luciobarbus bocagei (Steindachner, 1864)". Science of The Total Environment (2019): http://dx.doi.org/10.1016/j.scitotenv.2019.02.108.
    10.1016/j.scitotenv.2019.02.108
  25. Leite, Tamara; Santos, Jose Maria; Ferreira, Maria Teresa; Canhoto, Cristina; Branco, Paulo. "Does short-term salinization of freshwater alter the behaviour of the Iberian barbel (Luciobarbus bocagei, Steindachner 1864)?". The Science of the total environment 651 Pt 1 (2019): 648-655. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:30245421&KeyUID=MEDLINE:30245421.
    Published • 10.1016/j.scitotenv.2018.09.191
  26. Romão, Filipe; Quaresma, Ana L.; Santos, José M.; Branco, Paulo; Pinheiro, António N.. "Cyprinid passage performance in an experimental multislot fishway across distinct seasons". Marine and Freshwater Research (2019): http://dx.doi.org/10.1071/mf18232.
    10.1071/mf18232
  27. Santos, José. "How Does Season Affect Passage Performance and Fatigue of Potamodromous Cyprinids? An Experimental Approach in a Vertical Slot Fishway". Water (2018): http://www.mdpi.com/2073-4441/10/4/395.
    10.3390/w10040395
  28. S.D. Amaral; P. Branco; C. Katopodis; M.T. Ferreira; A.N. Pinheiro; J.M. Santos. "To swim or to jump? Passage behaviour of a potamodromous cyprinid over an experimental broad-crested weir". River Research and Applications (2018): https://doi.org/10.1002/rra.3232.
    10.1002/rra.3232
  29. Amaral, S.D.; Branco, P.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.N.; Santos, J.M.. "Cover Image, Volume 34, Issue 2". River Research and Applications 34 2 (2018): i-i. http://dx.doi.org/10.1002/rra.3253.
    Published • 10.1002/rra.3253
  30. Calapez, A.R.; Serra, S.R.Q.; Santos, J.M.; Branco, P.; Ferreira, T.; Hein, T.; Brito, A.G.; Feio, M.J.. "The effect of hypoxia and flow decrease in macroinvertebrate functional responses: A trait-based approach to multiple-stressors in mesocosms". Science of the Total Environment 637-638 (2018): 647-656. http://www.scopus.com/inward/record.url?eid=2-s2.0-85046754369&partnerID=MN8TOARS.
    10.1016/j.scitotenv.2018.05.071
  31. Sousa-Santos, Carla; Pereira, Ana M.; Branco, Paulo; Costa, Goncalo J.; Santos, Jose M.; Ferreira, Maria T.; Lima, Cristina S.; Doadrio, Ignacio; Robalo, Joana, I. "MITO-NUCLEAR SEQUENCING IS PARAMOUNT TO CORRECTLY IDENTIFY SYMPATRIC HYBRIDIZING FISHES". Acta Ichthyologica Et Piscatoria 48 2 (2018): 123-141. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000438656900002&KeyUID=WOS:000438656900002.
    10.3750/AIEP/02348
  32. Santos, J.M.; Rivaes, R.; Boavida, I.; Branco, P.. "Structural microhabitat use by endemic cyprinids in a Mediterranean-type river: Implications for restoration practices". Aquatic Conservation: Marine and Freshwater Ecosystems 28 (2018): 26-36. http://www.scopus.com/inward/record.url?eid=2-s2.0-85031315816&partnerID=MN8TOARS.
    Published • 10.1002/aqc.2839
  33. Amaral, Susana D.; Branco, Paulo; Romão, Filipe; Viseu, Teresa; Ferreira, Maria T.; Pinheiro, António N.; Santos, José M.. "The effect of weir crest width and discharge on passage performance of a potamodromous cyprinid". Marine and Freshwater Research 69 12 (2018): 1795. http://dx.doi.org/10.1071/mf18075.
    Published • 10.1071/mf18075
  34. Rui Rivaes; Isabel Boavida; José M. Santos; António N. Pinheiro; Teresa Ferreira. "Importance of considering riparian vegetation requirements for the long-term efficiency of environmental flows in aquatic microhabitats". Hydrology and Earth System Sciences 21 11 (2017): 5763-5780. https://doi.org/10.5194/hess-21-5763-2017.
    10.5194/hess-21-5763-2017
  35. Calapez, A.R.; Branco, P.; Santos, J.M.; Ferreira, T.; Hein, T.; Brito, A.G.; Feio, M.J.. "Macroinvertebrate short-term responses to flow variation and oxygen depletion: A mesocosm approach". Science of the Total Environment 599-600 (2017): 1202-1212. http://www.scopus.com/inward/record.url?eid=2-s2.0-85019072952&partnerID=MN8TOARS.
    10.1016/j.scitotenv.2017.05.056
  36. Romão, F.; Quaresma, A.L.; Branco, P.; Santos, J.M.; Amaral, S.; Ferreira, M.T.; Katopodis, C.; Pinheiro, A.N.. "Passage performance of two cyprinids with different ecological traits in a fishway with distinct vertical slot configurations". Ecological Engineering 105 (2017): 180-188. http://www.scopus.com/inward/record.url?eid=2-s2.0-85019082372&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2017.04.031
  37. Branco, P.; Amaral, S.D.; Ferreira, M.T.; Santos, J.M.. "Do small barriers affect the movement of freshwater fish by increasing residency?". Science of the Total Environment 581-582 (2017): 486-494. http://www.scopus.com/inward/record.url?eid=2-s2.0-85009198597&partnerID=MN8TOARS.
    10.1016/j.scitotenv.2016.12.156
  38. Santos, J.M.. "Upstream passage of potamodromous cyprinids over small weirs: the influence of key-hydraulic parameters". Journal of Ecohydraulics 1 1-2 (2016): 79-89. http://www.tandfonline.com/doi/abs/10.1080/24705357.2016.1237265.
    10.1080/24705357.2016.1237265
  39. Santos, J.M.. "Improving yellow eel upstream movements with fish lifts". Journal of Ecohydraulics 1 1-2 (2016): 50-61. http://www.tandfonline.com/doi/abs/10.1080/24705357.2016.1234341.
    10.1080/24705357.2016.1234341
  40. Sousa-Santos, C.; Robalo, J.I.; Pereira, A.M.; Branco, P.; Santos, J.M.; Ferreira, M.T.; Sousa, M.; Doadrio, I.. "Broad-scale sampling of primary freshwater fish populations reveals the role of intrinsic traits, inter-basin connectivity, drainage area and latitude on shaping contemporary patterns of genetic diversity". PeerJ 2016 2 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84963976371&partnerID=MN8TOARS.
    10.7717/peerj.1694
  41. Branco, P.; Santos, J.M.; Amaral, S.; Romão, F.; Pinheiro, A.N.; Ferreira, M.T.. "Potamodromous fish movements under multiple stressors: Connectivity reduction and oxygen depletion". Science of the Total Environment 572 (2016): 520-525. http://www.scopus.com/inward/record.url?eid=2-s2.0-84982296251&partnerID=MN8TOARS.
    10.1016/j.scitotenv.2016.08.070
  42. Silva, A.T.; Katopodis, C.; Tachie, M.F.; Santos, J.M.; Ferreira, M.T.. "Downstream Swimming Behaviour of Catadromous and Potamodromous Fish Over Spillways". River Research and Applications 32 5 (2016): 935-945. http://www.scopus.com/inward/record.url?eid=2-s2.0-84929439726&partnerID=MN8TOARS.
    10.1002/rra.2904
  43. R. Rivaes; I. Boavida; J. M. Santos; A. N. Pinheiro; M. T. Ferreira. "The inbuilt long-term unfeasibility of environmental flows when disregarding riparian vegetation requirements". Hydrology and Earth System Sciences Discussions 12 10 (2015): 10701-10737. https://doi.org/10.5194/hessd-12-10701-2015.
    10.5194/hessd-12-10701-2015
  44. Segurado, Pedro; Almeida, Carina; Santos, José Maria; Neves, Ramiro; Ferreira, Maria Teresa. "Biological and environmental database of Sorraia catchment (Portugal)". Freshwater Metadata Journal 5 (2015): 1-10.
  45. Boavida, I.; Santos, J.M.; Ferreira, T.; Pinheiro, A.. "Barbel habitat alterations due to hydropeaking". Journal of Hydro-Environment Research 9 2 (2015): 237-247. http://www.scopus.com/inward/record.url?eid=2-s2.0-84930041767&partnerID=MN8TOARS.
    10.1016/j.jher.2014.07.009
  46. Boavida, Isabel; Santos, José Maria; Cortes, Rui; Ferreira, Teresa; Pinheiro, António. "Setting environmental flows in a Mediterranean river using 2D habitat modeling". American Journal of Hydropower, Water and Environment Systems (2014): 6-11.
  47. Branco, P.; Segurado, P.; Santos, J.M.; Ferreira, M.T.. "Prioritizing barrier removal to improve functional connectivity of rivers". Journal of Applied Ecology 51 5 (2014): 1197-1206. http://www.scopus.com/inward/record.url?eid=2-s2.0-84925338161&partnerID=MN8TOARS.
    10.1111/1365-2664.12317
  48. Boavida, I.; Dias, V.; Ferreira, M.T.; Santos, J.M.. "Univariate functions versus fuzzy logic: Implications for fish habitat modeling". Ecological Engineering 71 (2014): 533-538. http://www.scopus.com/inward/record.url?eid=2-s2.0-84906218709&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2014.07.073
  49. Santos, J.M.; Branco, P.; Katopodis, C.; Ferreira, T.; Pinheiro, A.. "Retrofitting pool-and-weir fishways to improve passage performance of benthic fishes: Effect of boulder density and fishway discharge". Ecological Engineering 73 (2014): 335-344. http://www.scopus.com/inward/record.url?eid=2-s2.0-84907857946&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2014.09.065
  50. Santos, J.M.; Encina, L.; Oliveira, J.M.; Teixeira, A.. "Feeding ecology of the Ruivaco Achondrostoma oligolepis, a Portuguese endemic cyprinid fish". Limnetica 32 1 (2013): 27-38. http://www.scopus.com/inward/record.url?eid=2-s2.0-84880243068&partnerID=MN8TOARS.
  51. Santos, J.M.; Branco, P.J.; Silva, A.T.; Katopodis, C.; Pinheiro, A.N.; Viseu, T.; Ferreira, M.T.. "Effect of two flow regimes on the upstream movements of the Iberian barbel (Luciobarbus bocagei) in an experimental pool-type fishway". Journal of Applied Ichthyology 29 2 (2013): 425-430. http://www.scopus.com/inward/record.url?eid=2-s2.0-84874974620&partnerID=MN8TOARS.
    10.1111/jai.12043
  52. Branco, P.; Santos, J.M.; Katopodis, C.; Pinheiro, A.; Ferreira, M.T.. "Effect of flow regime hydraulics on passage performance of Iberian chub (Squalius pyrenaicus) (Günther, 1868) in an experimental pool-and-weir fishway". Hydrobiologia 714 1 (2013): 145-154. http://www.scopus.com/inward/record.url?eid=2-s2.0-84879417404&partnerID=MN8TOARS.
    10.1007/s10750-013-1532-7
  53. Branco, P.; Boavida, I.; Santos, J.M.; Pinheiro, A.; Ferreira, M.T.. "Boulders as building blocks: Improving habitat and river connectivity for stream fish". Ecohydrology 6 4 (2013): 627-634. http://www.scopus.com/inward/record.url?eid=2-s2.0-84881490705&partnerID=MN8TOARS.
    10.1002/eco.1290
  54. Boavida, I.; Santos, J.M.; Katopodis, C.; Ferreira, M.T.; Pinheiro, A.. "Uncertainty in predicting the fish-response to two-dimensional habitat modeling using field data". River Research and Applications 29 9 (2013): 1164-1174. http://www.scopus.com/inward/record.url?eid=2-s2.0-84885912800&partnerID=MN8TOARS.
    10.1002/rra.2603
  55. Branco, P.; Santos, J.M.; Katopodis, C.; Pinheiro, A.; Ferreira, M.T.. "Pool-Type Fishways: Two Different Morpho-Ecological Cyprinid Species Facing Plunging and Streaming Flows". PLoS ONE 8 5 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84878527253&partnerID=MN8TOARS.
    10.1371/journal.pone.0065089
  56. Boavida, I.; Santos, J.M.; Cortes, R.; Pinheiro, A.; Ferreira, M.T.. "Benchmarking river habitat improvement". River Research and Applications 28 10 (2012): 1768-1779. http://www.scopus.com/inward/record.url?eid=2-s2.0-84871361399&partnerID=MN8TOARS.
    10.1002/rra.1561
  57. Branco, P.; Segurado, P.; Santos, J.M.; Pinheiro, P.; Ferreira, M.T.. "Does longitudinal connectivity loss affect the distribution of freshwater fish?". Ecological Engineering 48 (2012): 70-78. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867330895&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2011.05.008
  58. Silva, A.T.; Katopodis, C.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.. "Cyprinid swimming behaviour in response to turbulent flow". Ecological Engineering 44 (2012): 314-328. http://www.scopus.com/inward/record.url?eid=2-s2.0-84860498822&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2012.04.015
  59. Oliveira, J.M.; Segurado, P.; Santos, J.M.; Teixeira, A.; Ferreira, M.T.; Cortes, R.V.. "Modelling Stream-Fish Functional Traits in Reference Conditions: Regional and Local Environmental Correlates". PLoS ONE 7 9 (2012): http://www.scopus.com/inward/record.url?eid=2-s2.0-84866670580&partnerID=MN8TOARS.
    10.1371/journal.pone.0045787
  60. Santos, J.M.; Silva, A.; Katopodis, C.; Pinheiro, P.; Pinheiro, A.; Bochechas, J.; Ferreira, M.T.. "Ecohydraulics of pool-type fishways: Getting past the barriers". Ecological Engineering 48 (2012): 38-50. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867332584&partnerID=MN8TOARS.
    10.1016/j.ecoleng.2011.03.006
  61. Silva, A.T.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.; Katopodis, C.. "Passage efficiency of offset and straight orifices for upstream movements of Iberian barbel in a pool-type fishway". River Research and Applications 28 5 (2012): 529-542. http://www.scopus.com/inward/record.url?eid=2-s2.0-84861784331&partnerID=MN8TOARS.
    10.1002/rra.1465
  62. Boavida, I.; Santos, J.M.; Pinheiro, A.N.; Ferreira, M.T.. "Fish habitat availability simulations using different morphological variables". Limnetica 30 2 (2011): 393-404. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866353287&partnerID=MN8TOARS.
  63. Boavida, I.; Santos, J.M.; Cortes, R.V.; Pinheiro, A.N.; Ferreira, M.T.. "Assessment of instream structures for habitat improvement for two critically endangered fish species". Aquatic Ecology 45 1 (2011): 113-124. http://www.scopus.com/inward/record.url?eid=2-s2.0-79651473508&partnerID=MN8TOARS.
    10.1007/s10452-010-9340-x
  64. Silva, A.T.; Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.; Katopodis, C.. "Effects of water velocity and turbulence on the behaviour of Iberian barbel (Luciobarbus bocagei, Steindachner 1864) in an experimental pool-type fishway". River Research and Applications 27 3 (2011): 360-373. http://www.scopus.com/inward/record.url?eid=2-s2.0-79952294222&partnerID=MN8TOARS.
    10.1002/rra.1363
  65. Santos, J.M.; Reino, L.; Porto, M.; Oliveira, J.; Pinheiro, P.; Almeida, P.R.; Cortes, R.; Ferreira, M.T.. "Complex size-dependent habitat associations in potamodromous fish species". Aquatic Sciences 73 2 (2011): 233-245. http://www.scopus.com/inward/record.url?eid=2-s2.0-79955138615&partnerID=MN8TOARS.
    10.1007/s00027-010-0172-5
  66. Segurado, P.; Santos, J.M.; Pont, D.; Melcher, A.H.; Jalon, D.G.; Hughes, R.M.; Ferreira, M.T.. "Estimating species tolerance to human perturbation: Expert judgment versus empirical approaches". Ecological Indicators 11 6 (2011): 1623-1635. http://www.scopus.com/inward/record.url?eid=2-s2.0-79958149358&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.04.006
  67. Hughes, S.J.; Santos, J.; Ferreira, T.; Mendes, A.. "Evaluating the response of biological assemblages as potential indicators for restoration measures in an intermittent mediterranean river". Environmental Management 46 2 (2010): 285-301. http://www.scopus.com/inward/record.url?eid=2-s2.0-77956186293&partnerID=MN8TOARS.
    10.1007/s00267-010-9521-3
  68. Silva, A.T.; Santos, J.M.; Franco, A.C.; Ferreira, M.T.; Pinheiro, A.N.. "Selection of Iberian barbel Barbus bocagei (Steindachner, 1864) for orifices and notches upon different hydraulic configurations in an experimental pool-type fishway". Journal of Applied Ichthyology 25 2 (2009): 173-177. http://www.scopus.com/inward/record.url?eid=2-s2.0-70350270295&partnerID=MN8TOARS.
    10.1111/j.1439-0426.2009.01237.x
  69. Hughes, S.J.; Santos, J.M.; Ferreira, M.T.; Caraça, R.; Mendes, A.M.. "Ecological assessment of an intermittent Mediterranean river using community structure and function: Evaluating the role of different organism groups". Freshwater Biology 54 11 (2009): 2383-2400. http://www.scopus.com/inward/record.url?eid=2-s2.0-70349865061&partnerID=MN8TOARS.
    10.1111/j.1365-2427.2009.02253.x
  70. Santos, J.M.; Pinheiro, P.J.; Ferreira, M.T.; Bochechas, J.. "Monitoring fish passes using infrared beaming: A case study in an Iberian river". Journal of Applied Ichthyology 24 1 (2008): 26-30. http://www.scopus.com/inward/record.url?eid=2-s2.0-38049162198&partnerID=MN8TOARS.
    10.1111/j.1439-0426.2007.01008.x
  71. Santos, J.M.; Ferreira, M.T.. "Microhabitat use by endangered Iberian cyprinids nase Iberochondrostoma almacai and chub Squalius aradensis". Aquatic Sciences 70 3 (2008): 272-281. http://www.scopus.com/inward/record.url?eid=2-s2.0-50649088606&partnerID=MN8TOARS.
    10.1007/s00027-008-8037-x
  72. Ferreira, M.T.; Sousa, L.; Santos, J.M.; Reino, L.; Oliveira, J.; Almeida, P.R.; Cortes, R.V.. "Regional and local environmental correlates of native Iberian fish fauna". Ecology of Freshwater Fish 16 4 (2007): 504-514. http://www.scopus.com/inward/record.url?eid=2-s2.0-36248952188&partnerID=MN8TOARS.
    10.1111/j.1600-0633.2007.00241.x
  73. Santos, J.M.; Ferreira, M.T.; Pinheiro, P.J.; Lopes, L.F.. "Impacto do empreendimento de Odelouca (período de construção) na composição e distribuição espacial da comunidade piscícola". Revista Recursos Hídricos 28 (2007): 5-13.
    Published
  74. Fernandes, M.R.; Ferreira, M.T.; Hughes, S.J.; Cortes, R.; Santos, J.M.; Pinheiro, P.J.. "Pré-classificação da qualidade ecológica na bacia de Odelouca e sua utilização em directrizes de restauro". Revista Recursos Hídricos 28 (2007): 15-24.
    Published
  75. Santos, J.M.; Ferreira, M.T.; Pinheiro, A.N.; Bochechas, J.H.. "Effects of small hydropower plants on fish assemblages in medium-sized streams in central and northern Portugal". Aquatic Conservation: Marine and Freshwater Ecosystems 16 4 (2006): 373-388. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745430468&partnerID=MN8TOARS.
    10.1002/aqc.735
  76. Santos, J.M.; Ferreira, M.T.; Godinho, F.N.; Bochechas, J.. "Efficacy of a nature-like bypass channel in a Portuguese lowland river". Journal of Applied Ichthyology 21 5 (2005): 381-388. http://www.scopus.com/inward/record.url?eid=2-s2.0-33845359440&partnerID=MN8TOARS.
    10.1111/j.1439-0426.2005.00616.x
  77. Santos, J.M.; Godinho, F.N.; Ferreira, M.T.. "Microhabitat use by Iberian nase Chondrostoma polylepis and Iberian chub Squalius carolitertii in three small streams, north-west Portugal". Ecology of Freshwater Fish 13 3 (2004): 223-230. http://www.scopus.com/inward/record.url?eid=2-s2.0-4344646325&partnerID=MN8TOARS.
    10.1111/j.1600-0633.2004.00054.x
  78. Santos, J.M.; Godinho, F.; Ferreira, M.T.; Cortes, R.. "The organisation of fish assemblages in the regulated Lima basin, Northern Portugal". Limnologica 34 3 (2004): 224-235. http://www.scopus.com/inward/record.url?eid=2-s2.0-8644254254&partnerID=MN8TOARS.
    10.1016/S0075-9511(04)80047-1
  79. Santos, J.M.; Ferreira, M.T.; Godinho, F.N.; Bochechas, J.. "Performance of fish lift recently built at the Touvedo Dam on the Lima River Portugal". Journal of Applied Ichthyology 18 2 (2002): 118-123. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036539980&partnerID=MN8TOARS.
    10.1046/j.1439-0426.2002.00309.x
  80. Godinho, F.N.; Ferreira, M.T.; Santos, J.M.. "Variation in fish community composition along an Iberian river basin from low to high discharge: Relative contributions of environmental and temporal variables". Ecology of Freshwater Fish 9 1-2 (2000): 22-29. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034079067&partnerID=MN8TOARS.
    10.1034/j.1600-0633.2000.90104.x
  81. Santos, J.M.; Ferreira, M.T.; Godinho, F.N.. "Estrutura etária e crescimentos das espécies piscícolas mais frequentes no rio Guadiana e afluentes. Transição de um período seco para um período húmido". Silva Lusitana 8 (2000): 107-117.
    Published
  82. Godinho, F.N.; Ferreira, M.T.; Santos, J.M.. "Changes in the summer composition of fish fauna in the lower guadiana basin (southern iberia) from low to high discharge". Journal of Freshwater Ecology 13 4 (1998): 481-483. http://www.scopus.com/inward/record.url?eid=2-s2.0-0032406057&partnerID=MN8TOARS.
    10.1080/02705060.1998.9663645
  83. Santos, J.M.; Ferreira, M.T.; Godinho, F.N.. "Composição das comunidades piscícolas da bacia do Guadiana em anos hidrológicos de características diferentes". Revista Recursos Hídricos 19 (1998): 29-39.
    Published
Journal issue
  1. Santos, J.M.. "Fish Passage 2020 - International Conference on River Connectivity". Journal of Ecohydraulics (2019):
    In press • Invited editor
  2. Santos, J.M.. "Integrating Ecohydraulics in River Restoration: Advances in Science and Applications". Sustainability (2018): https://www.mdpi.com/journal/sustainability/special_issues/River_Restoration.
    Under revision • Invited editor
  3. Santos, J.M.. "Use of Aquatic Biota to Detect Ecological Changes in Freshwater: Current Status and Future Directions". Water (2018):
    Under revision • Invited editor
Magazine article
  1. Duarte, G.; Fernandes, M.R.; Fonseca, A.; Zina, V.; Conde, S.; Branco, M.; Franco, J.C.; et al. "Otimização de infraestruturas verdes em vales agrícolas irrigados para promoção da qualidade ambiental e biodiversidade.", Revista Agrotejo, Novembro 2019. , 2019, https://www.researchgate.net/publication/337195653_Projeto_Optimus_Prime_-_Otimizacao_de_infraestruturas_verdes_em_vales_agricolas_irrigados_para_promocao_da_qualidade_ambiental_e_biodiversidade#fullTextFileContent.
  2. Duarte, Gonçalo; Maria Rosário Fernandes; André Fonseca; Vera Zina; Sofia Conde; Manuela Branco; Franco, J.C.; et al. "Projeto Optimus Prime - Otimização de infraestruturas verdes em vales agrícolas irrigados para promoção da qualidade ambiental e biodiversidade", Agrotejo, 2019
Manual
  1. Bernardo, J.M.; Ilhéu, M.; Matono, P.; Cortes, R.; Ferreira, M.T.; Santos, J.M.; Formigo, N.; Almeida, P.R.; Quintella, B.. Manual para a avaliação biológica da qualidade da água em sistemas fluviais segundo a Directiva Quadro da Água. Protocolo de amostragem e análise para a fauna piscícola. Portugal: Instituto da Água. 2008.
    Published
Report
  1. Oliva-Paterna, F.J.; Oficialdegui, F.J. ; Sánchez-González, J.R.; Zamora-Marín, J.M.; Casals, F.; Ribeiro, F.; Torralva, M.; et al. 2023. STRATEGIC RECOMMENDATIONS FOR THE TRANSNATIONAL MANAGEMENT OF INVASIVE ALIEN FISH IN IBERIAN INLAND WATERS.
  2. Ferreira, M.T.; Aguiar, F.C.; Albuquerque, A.; Rodríguez-González, Patricia María; Santos, J.M.. 2005. Directiva Quadro da Água: Qualidade ecológica na bacia hidrográfica do rio Tejo e nas bacias hidrográficas das ribeiras do Oeste.

Other

Other output
  1. Aquatic Species Invasiveness Screening Kit (AS-ISK) v2. The Aquatic Species Invasiveness Screening Kit (AS-ISK v2) is a multi-lingual decision support tool for the identification and management of invasive non-native aquatic species. Funding was provided by the EC (Project no.: 044142 [IMPASSE] for Coordination Action Priority FP6 2005-SSP-5A), with additional financial support from the UK Department of Environment, Food & Rural Affairs.. 2018. Santos, J.M.. http://www.cefas.co.uk/nns/tools/.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2024/04/02 Fish ecology and microhabitat in rivers affected by small hydropower plants Seminar "Sustainable Hydropower: Insigths from Norway"
Instituto Superior Técnico (Lisboa, Portugal)
2023/07 Promoting the resilience of streams and rivers to climate change SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/06/23 Making the most of vertical slot fishways: achieving the best design SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/06/23 River Network connectivity - Taking a holistic approach SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/06/22 Swimming under pressure: subletal effects of a pesticide on the behaviour of native and non-native cypriniformes fish RestauraRios 2023
Iberian Centre of River Restoration (Toledo, Spain)
2023/06/20 How stresses affect freshwater fish? SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/06/20 No continent for freshwater fish - current status and threats of European freshwater fish species SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/06/19 Effects of hydropeaking-induced flow variations on fish microhabitat use downstream from small hydropower plants SEFS 13
Freshwater Biological Association (Newcastle, United Kingdom)
2023/05/12 A fauna piscícola e as centrais hidroelétricas Sessão Pública de Divulgação do Projeto EcoPeak4Fish - uma abordagem integrada para a sustentabilidade das populações piscícolas a jusante de Aproveitamentos Hidroelétricos
Câmara Municipal de Boticas (Boticas, Portugal)
2023/04 Mitigating the hydropeaking using flow refuge: an experimental case-study EGU General Assembly 2023
EGU General Assembly (Vienna, Austria)
2023/03/23 Hydropeaking: how to assess and mitigate impacts 16º Congresso da Água
APRH (Lisboa, Portugal)
2023/03/23 Efeito de hidropicos induzidos por pequenas centrais hidroelétricas no uso sazonal e ontogenético do microhabitat de leuciscídeos e salmonídeos nativos 16º Congresso da Água
APRH (Lisboa, Portugal)
2023/03/23 Passagens para peixes em Portugal: estado atual e direções futuras 16º Congresso da Água
APRH (Lisboa, Portugal)
2023/03/22 The use of flow-refuges by endemic fish species under simulated pulsed flows: insigths from flume research 16º Congresso da Água
APRH (Lisboa, Portugal)
2023/03/22 Dammed Fish: Impacto da perda de conectividade estrutural e funcional de redes hidrográficas na biodiversidade piscícola- otimizando soluções de gestão 16º Congresso da Água
APRH (Lisboa, Portugal)
2023/01 EcoPeak4Fish: uma abordagem integrada para a sustentabilidade de populações piscicolas a jusante de centrais hidroelétricas XII Congreso Ibérico de Gestión y Planificación del Agua
Universidad de Murcia (Murcia, Spain)
2022/10/11 Environmental flow regime prescription transfer along a river basin 14th International Symposium on Ecohydraulics
Hohai University (Nanjing, China)
2022/09/07 How does cold thermopeaking influence the drift of young-of-the-year cyprinid nase (Chondrostoma nasus)? INTECOL 2022 - Frontiers in Ecology: Science & Society
University of Geneva (Geneva, Switzerland)
2022/08/09 River network connectivity - An ovearching approach 36th Congress of the International Society of Limnology
International Society of Limnology (Berlin, Germany)
2022/08/08 Spatial patterns and knowledge gaps of the threats to European freshwater fishes 36th Congress of the International Society of Limnology
International Society of Limnology (Berlin, Germany)
2022/07 Climate change vulnerability of riverine ecosystems in Mediterranean-climate regions: lessons for promoting resilience 2nd Meeting of the Iberian Ecological Society (SIBECOL)
(Aveiro, Portugal)
2022/06 The Red List Threats to European Freshwater Fishes—Spatial Patterns and Knowledge Gaps IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 River network connectivity- An holistic approach to improve the sustainability of fish populations IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 Effects of river salinization on freshwater fish behavior: cerebral lateralization, activity, boldness, and schooling IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 Should I stay or should I go? Fish passability in a rock weir (Tagus River) under climate change scenarios IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 A Matter of Approach: Analysis of the Flow Refuge Preferences of Iberian Barbels during Pulsed Flows in Flume Conditions IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 EcoPeak4Fish: a multidisciplinary project targeting the protection of fish populations affected by hydropeaking IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 Effects of a pyrethroid pesticide on the behaviour of native and non-native cypriniformes fish IX Iberian Congress of Ichthyology
(Porto, Portugal)
2022/06 Meta-analyzing Vertical slot fishways: what is the best design? 39th IAHR World Congress
(Granada, Spain)
2022/06 The EcoPeak4Fish Project: An integrated approach to support self-sustaining fish populations downstream hydropower plants 39th IAHR World Congress
(Granada, Spain)
2022/06 Effect of discharge and retrofitting options of low-head ramped weir on passage performance of a potamodromous cyprinid fish 39th IAHR World Congress
IAHR (Granada, Spain)
2022/05/17 Efeitos de um pesticida piretróide no comportamento de peixes de água doce nativos e não-nativos Ciência 2022 - Encontro com a ciência e tecnologia em Portugal
Fundação para a Ciência e Tecnologia (Lisboa, Portugal)
2022/04/02 O uso da engenharia natural e de modelos experimentais para aplicações em orientações de restauro ecológico I Simpósio Fluviário de Mora - Restauro e Conservação de Ecossistemas Fluviais
Fluviário de Mora (Portugal)
2021/07/30 Effect of retrofitting ramped weirs on passage performance of potamodromous cyprinids fish 12th Symposium for European Freshwater Sciences
Irish Freshwater Sciences Association (Dublin, Ireland)
2021/07/26 Modelling fish passability across a weir (Tagus River) under climate change scenarios 12th Symposium for European Freshwater Sciences
Irish Freshwater Sciences Association (Dublin, Ireland)
2021/07 Drivers of invasion success of non native fish species across Europe 12th Symposium for European Freshwater Sciences
Irish Freshwater Sciences Association (Dublin, Ireland)
2021/07 Vertical slot fishways: incremental knowledge to find perfect solutions 12th Symposium for European Freshwater Sciences
Irish Freshwater Sciences Association (Dublin, Ireland)
2021/07 Assessing major threats to European freshwater fishes using the IUCN red list 12th Symposium for European Freshwater Sciences
Irish Freshwater Sciences Association (Dublin, Ireland)
2021/03/25 Efeito de pequenos açudes nos movimentos das espécies ciprinícolas potamódromas 15º Congresso da Água
APRH (Portugal)
2020/11/23 Passage of small instream obstacles by potamodromous fish: main findings and implications from experimental research 13th International Symposium on Ecohydraulics
IAHR (Lyon, France)
2020/10 Heat wave effects on the swimming behaviour of a Mediterranean freshwater fish, the Iberian barbel Luciobarbus bocagei Limnología 2020
(Murcia, Spain)
2020/06/17 Negotiation of small instream obstacles by potamodromous fish: main findings from experimental research VIII Iberian Congress of Ichthyology
Iberian Society of Ichthyology (Santiago de Compostela, Spain)
2019/09/02 The effect of slope and ramp length on upstream passage performance of potamodromous cyprinids negotiating low-head ramped weirs 38th IAHR World Congress
Panama City (Panama City, Panama)
2019/09 Passage performance of potamodromous cyprinids negotiating low-head ramped weirs 6th biennial Symposium of the International Society for River Science
University of Natural Resources and Life Sciences (Vienna, Austria)
2019/09 Improving fish transit times: an experimental approach to develop a holistic fish passage 6th biennial Symposium of the International Society for River Science
University of Natural Resources and Life Sciences (Vienna, Austria)
2019/09 Effectiveness of vertical slot fishways under experimental non-uniform flows 6th biennial Symposium of the International Society for River Science
University of Natural Resources and Life Sciences (Vienna, Austria)
2019/09 Transponibilidade de um açude experimental rampeado por ciprinídeos potamódromos: efeito do comprimento e do declive da rampa 14º Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa (SILUSBA)
Associação Portuguesa dos Recursos Hídricos (APRH) (Praia, Cape Verde)
2019/09 Desempenho de passagem de ciprinídeos ibéricos com diferentes traços ecológicos numa passagem para peixes experimental de fendas verticais com configurações distintas 14º Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa (SILUSBA)
Associação Portuguesa dos Recursos Hídricos (APRH) (Praia, Cape Verde)
2019/07/01 Short-term exposure to wildfire ash affects behaviour and condition of a potamodromous cyprinid fish, the Iberian barbel (Luciobarbus bocagei) 11th Symposium for European Freshwater Sciences
Croatian Association of Freshwater Ecologists (Zagreb, Croatia)
2019/05/08 Connectivity improvement of instream obstacles in Mediterranean rivers: case-studies from Portugal River conservation actions - AMBER National Workshop
Ministry of Environment and Energy of Greece (Athens, Greece)
2018/12/13 Assessing multi slot versus single slot pool-type fishways suitability for potamodromous cyprinids: an experimental approach using numerical modelling and fish Fish Passage 2018 - International Conference on River Connectivity
(Albury, Australia)
2018/12/13 How different cyprinids perform in an experimental multi slot fishway? testing its effectiveness in distinct seasons Fish Passage 2018 - International Conference on River Connectivity
(Albury, Australia)
2018/12/13 Action plan for the optimization of the fish lift built at the Touvedo hydropower plan, NW Portugal Fish Passage 2018 - International Conference on River Connectivity
(Albury, Australia)
2018/12/11 The effect of weir crest width and discharge on passage performance of a potamodromous cyprinid Fish Passage 2018 - International Conference on River Connectivity
(Albury, Australia)
2018/09 Microhabitat use of endemic cyprinids as a tool to inform restoration practices in Mediterranean rivers Symposium for the Conservation of Freshwater Fish and Habitat Rehabilitation
(Évora, Portugal)
2018/08 Single- or multi-slot fishways in Mediterranean rivers? An experimental approach with a potamodromous cyprinid fish 12th International Symposium on Ecohydraulics
(Tokyo, Japan)
2018/08 Microhabitat use of endemic cyprinids as a tool to inform river restoration in Mediterranean regions 12th International Symposium on Ecohydraulics
(Tokyo, Japan)
2018/06 Upstream movements of a potamodromous cyprinid past an experimental broad-crested small weir XIX Conference of the Iberian Association of Limnology
(Coimbra, Portugal)
2018/06 Transferability of environmental flows: a case-study in a Mediterranean river 2016 XIX IEEE International Conference on Soft Computing and Measurements (SCM)
(Coimbra, Portugal)
2018/06 Short-term effects of wildfire ash exposure on behaviour and conditions of a cyprinid fish, the Iberian barbel (L. bocagei) 7th Iberian Congress of Ichthyology – where rivers meed the ocean
(Faro, Portugal)
2018/06 Action plan for the optimization of the fish lift built at the Touvedo hydropower plant – final results 7th Iberian Congress of Ichthyology – where rivers meet the ocean
(Faro, Portugal)
2018/06 Passage behaviour of potamodromous cyprinids Negotiating a small experimental weir: passage by swimming or jumping? 7th Iberian Congress of Ichthyology – where rivers meet the ocean
(Faro, Portugal)
2018/06 Passage performance of potamodromous cyprinids over an experimental low-head ramped weir: effects of slope and ramp length 7th Iberian Congress of Ichthyology – where rivers meet the ocean
(Faro, Portugal)
2018/06 Negotiation of small weirs by potamodromous cyprinids: the effect of key hydraulic parameters 3rd International Conference I.S. Rivers – Integrative sciences and sustainable development of rivers
(Lyon, France)
2018/06 Fish passage facilities: types, principles and case studies Workshop Fish Passage and Barriers / 7th Iberian Congress of Ichthyology
(Faro, Portugal)
2018/03 Influência da profundidade, altura da queda e caudal no comportamento de transposição de peixes potamódromos através de açudes de faces verticais 14º Congresso da Água
(Évora, Portugal)
2018/03 Plano de ação para a otimização do ascensor de peixes do aproveitamento hidroelétrico de Touvedo – resultados finais 14º Congresso da Água
(Évora, Portugal)
2018 Fishways: types, principles and case-studies in Portugal Master program of Conservation Biology
Faculty of Sciences, University of Lisbon (Lisboa, Portugal)
2017/12/14 Permeabilidade de diferentes tipos de obstáculos fluviais à migração de peixes V Jornadas de Restauro Fluvial
APRH (Lisboa, Portugal)
2017/09 Resposta de peixes potamódromos sujeitos a pressões múltiplas: quebra de conectividade e depleção de oxigénio dissolvido 13º SILUSBA – Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa
(Porto, Portugal)
2017/07 How do physical and chemical combined stressors affect short-term drift response of benthic macroinvertebrates? 10th Symposium for European Freshwater Sciences
(Olomouc, Czech Republic)
2017/06 Passage performance of two cyprinids with different ecological traits in a fishway with distinct vertical slot configurations Fish Passage 2017 - International Conference on Engineering and Ecohydrology for Fish Passage
(Corvallis, United States)
2017/06 Does season matter? Adressing motivation of a potamodromous fish species in an experimental full-scale vertical slot fishway Fish Passage 2017 - International Conference on Engineering and Ecohydrology for Fish Passage
(Corvallis, United States)
2017/06 Passage behaviour of potamodromous cyprinids negotiating a small experimental weir: passage by swimming or jumping? Fish Passage 2017 - International Conference on Engineering and Ecohydrology for Fish Passage
(Corvallis, United States)
2016/06 Negotiation of small weirs by potamodromous cyprinids: the effect of waterfall height, plunge pool depth and flow discharge 6th Iberian Congress of Ichthyology
(Murcia, Spain)
2016/06 The FISHMOVE project - Development of mitigation measures for small instream obstacles to fish migration in Portuguese streams Fish Passage 2016 - International Conference on River Connectivity
(Amherst, United States)
2016/06 Improvement of yellow eels'movements through fish lifts Fish Passage 2016 - International Conference on River Connectivity
(Amherst, United States)
2016/06 Fishways. Studies of river connectivity and scientific studies in Portugal VI Jornadas Técnicas del Centro Ibérico de Restauración Fluvial
(Albacete, Spain)
2016/03 Caudais ecológicos em Portugal: consideração dos requisitos da vegetação ripária para assegurar a sustentabilidade das comunidades aquáticas 13º Congresso da Água
(Lisboa, Portugal)
2016/03 Apresentação da aplicação Web para o cálculo do índice piscícola para rios vadeáveis portugueses (F-IBIP) 13º Congresso da Água
(Lisboa, Portugal)
2016/03 Desempenho natatório de uma espécie potamódromas através de um açude experimental sujeito a variações de profundidade e altura de queda de água 13º Congresso da Água
(Lisboa, Portugal)
2016/03 Projeto FISHMOVE – Desenvolvimento de medidas de mitigação para pequenas barreiras à migração de peixes dulçaquícolas em rios Portugueses 13º Congresso da Água
(Lisboa, Portugal)
2016/02 Potamodromous fish responses to multiple stressors: water scarcity and oxygen depletion 11th International Symposium on Ecohydraulics
(Melbourne, Australia)
2016/02 Measuring longitudinal river network connectivity 11th International Symposium on Ecohydraulics
(Melbourne, Australia)
2016/02 Performance of a potamodromous cyprinid negotiating a small weir 11th International Symposium on Ecohydraulics
(Melbourne, Australia)
2016 Mudança de paradigma na determinação de caudais ecológicos em Portugal – incorporar requisitos de vegetação ripária para assegurar a sustentabilidade das comunidades aquáticas 13º Congresso da Água
APRH (Lisboa, Portugal)
2015/11 Experimental models for applications in ecological restoration guidelines IV Jornadas de Restauro Fluvial
(Lisboa, Portugal)
2015/07 Passage performance of a potamodromous cyprinid through a small weir 9th Symposium for European Freshwater Sciences
(Geneva, Switzerland)
2015/07 Improving fish movements in river networks- an overarching approach 9th Symposium for European Freshwater Sciences
(Geneva)
2015/06 The influence of bottom rugosity on the performance of upstream fish movements through a pool-type fishway under different discharges 36th IAHR World Congress
(Delft, Netherlands)
2015/06 River connectivity for fish – a multi-scale, multi-purpose approach Fish Passage 2015 - International conference on river connectivity best practices and innovations
(Groningen, Netherlands)
2015/06 Improving the efficacy of yellow eels' upstream movements through fish lifts Fish Passage 2015 - International conference on river connectivity best practices and innovations
(Groningen, Netherlands)
2015/06 Improving the use of fish lift by eels and medium-sized cyprinid species International Conference on Advancements and Recent Innovations in Mechanical, Production and Industrial Engineering
(Groningen, Netherlands)
2015/06 Movements of a potamodromous cyprinid past an experimental weir with variable height and plunge pool depth Fish Passage 2015 - International conference on river connectivity best practices and innovations
(Groningen, Netherlands)
2015 Fish natural habitat maintenance through riparian-addressed environmental flows 9th Symposium for European Freshwater Sciences
(Geneve, Switzerland)
2014/08 Cyprinid fish movements in upstream fragmented streams 11th International Congress on the Biology of Fish
(Edinburgh, United Kingdom)
2014/08 A graph based approach to enhance functional connectivity of fragmented systems 11th International Congress on the Biology of Fish
(Edinburgh, United Kingdom)
2014/06 Can the placement of artificial boulders in pool-type fishways improve passage performance of benthic species? 5th Iberian Congress of Icthyology – Know to preserve
(Lisboa, Portugal)
2014/06 Movements of native cyprinids in an upstream weir-fragmented stream 5th Iberian Congress of Icthyology – Know to preserve
(Lisboa, Portugal)
2014/06 Movements of yellow eels (Anguilla anguilla L.) migrating through a fish lift 5th Iberian Congress of Icthyology – Know to preserve
(Lisboa, Portugal)
2014/06 Global genetic diversity of native cyprinids in the Iberian Peninsula 5th Iberian Congress of Icthyology – Know to preserve
(Lisboa, Portugal)
2014/06 Using graph theory to connect the dots in fragmented drivers 5th Iberian Congress of Icthyology – Know to preserve
(Lisboa, Portugal)
2014/06 Effects of substrate and flow discharge on passage by Iberian barbel (L. bocagei) in an experimental pool-type fishway 10th International Symposium on Ecohydraulics
(Throndheim, Norway)
2014/06 Migration patterns of European yellow eels (Anguilla anguilla) through a fish lift 10th International Symposium on Ecohydraulics
(Throndheim, Norway)
2014/06 Towards an hollistic approach on environmental flow science - adding riparian requirements into consideration 10th International Symposium on Ecohydraulics
(Throndheim, Norway)
2014/06 Data-driven approaches and fuzzy-logic: Which one to choose? 10th International Symposium on Ecohydraulics
(Throndheim, Norway)
2014/03 Colocação de substratos artificiais em passagens para peixes do tipo bacias sucessivas: efeitos da densidade e do caudal 12º Congresso da Água
(Lisboa, Portugal)
2014/03 Modelação dos habitats piscícolas com recurso a curvas de preferência e à lógica fuzzy 12º Congresso da Água
(Lisboa, Portugal)
2014/03 Qual o melhor regime de escoamento em passagens para peixes por bacias sucessivas? 12º Congresso da Água
(Lisboa, Portugal)
2014/03 Ascensor para peixes de Touvedo: padrões de utilização piscícola e eficácia 12º Congresso da Água
(Lisboa, Portugal)
2014 Fishways: types, principles and case-studies in Portugal Master program of Conservation Biology
Faculty of Sciences, University of Lisbon (Lisboa, Portugal)
2013/09 Fish Habitat response to hydropeaking 35th IAHR World Congress
(Chengdu, China)
2013/09 Upscaling fish habitat suitability to the basin scale using boosted regression trees 35th IAHR World Congress
(Chengdu, China)
2013/07 Longitudinal connectivity enhancement priorities for stream fishes: a spatial graph approach 8th Symposium for European Freshwater Sciences
(Munster, Germany)
2013/06 Does boulder density and flow discharge influence cyprinid fish performance in pool-type fishways? Fish Passage 2013 - International Conference on Engineering & Ecohydrology for Fish Passage
(Corvallis, United States)
2013/06 Seasonal and diel movement patterns of yellow eels migrating through a fish lift Fish Passage 2013 - International Conference on Engineering & Ecohydrology for Fish Passage
(Corvallis, United States)
2013/06 Effect of unsteady flow on downstream behaviour and passage of the European Eel (Anguilla anguilla) and Iberian Barbel (Luciobarbus bocagei) over a spillway Fish Passage 2013 - International Conference on Engineering & Ecohydrology for Fish Passage
(Corvallis, United States)
2013/05 Movement behaviour of the European Eel (Anguilla anguilla) and Iberian Barbel (Luciobarbus bocagei) during downstream passage over a spillway 21st Canadian Hydrotechnical Conference
(Banff, Canada)
2013 Fishways: types, principles and case-studies in Portugal Master program of Conservation Biology
Faculty of Sciences, University of Lisbon (Lisboa, Portugal)
2012/09 Cyprinid fish response to the hydraulic environment created by boulder placement in an experimental pool-type fishway 9th International Symposium on Ecohydraulics
(Vienna, Austria)
2012/09 Behaviour of two ecologically different cyprinid species in a pool-type fishway 9th International Symposium on Ecohydraulics
(Vienna, Austria)
2012/09 Application of hydrodynamics modelling to determine regulation impact in fish habitat International Conference on the Ecohydrology and Ecological Quality of Temporary Rivers
(Évora, Portugal)
2012/09 Response of fish species traits to diferente types of human pressures along a flow regime gradient International Conference on the Ecohydrology and Ecological Quality of Temporary Rivers
(Évora, Portugal)
2012/09 FISHATLAS Project: a broad genetic diversity survey of native cyprinid species International Conference on the Ecohydrology and Ecological Quality of Temporary Rivers
(Évora, Portugal)
2012/07 Response of a potamodromous fish (Luciobarbus bocagei) to the hydraulic environment created by boulder placement in an experimental pool-type fishway 4th Iberian Congress of Icthyology
(Girona, Spain)
2012/07 Behaviour of two ecologically different cyprinid species in a pool-type fishway 4th Iberian Congress of Ichthyology
(Girona, Spain)
2012/07 How do fish functional traits correlate to human disturbance at different spatial scales? 4th Iberian Congress of Ichthyology
(Girona, Spain)
2012/07 Performance of two cyprinid species upon distinct flow regimes in a pool-type fishway XVI Congress of the Iberian Association of Limnology
(Guimarães, Portugal)
2012/02 A importância do troço de referência para a requalificação fluvial 11º Congresso da Água
(Porto, Portugal)
2012/01 How do multi-scale environmental gradients affect distribution of potamodromous cyprinid fish? 5th International Perspective on Water Resources & The Environment
(Marrakech, Morocco)
2012 Fishways: types, principles and case-studies in Portugal Master program of Conservation Biology
Faculty of Sciences, University of Lisbon (Lisboa, Portugal)
2011/06 Effects of flow regime on fish passage success in an experimental pool-type fishway 7th Symposium for European Freshwater Sciences
(Girona, Spain)
2011/06 Substrate density influences fish passage success in pool-type fishways Euromech Colloquium 523
(Clermont-Ferrand, France)
2011/06 Does boulder placement improve habitat for stream fish? Euromech Colloquium 523
(Clermont-Ferrand, France)
2011/06 Cyprinid swimming behaviour response to turbulent flow in pool-type fishways Fish Passage 2011 - National Conference on Engineering & Ecohydology for Fish Passage
(Amherst, United States)
2011/03 A integridade fluvial como objetivo essencial em pequenos aproveitamentos hidroelétricos Conferência-Debate – Ambicionar a Compatibilização de Pequenos Aproveitamentos Hidroelétricos com a Conservação da Natureza e da Biodiversidade
(Porto, Portugal)
2010/09 Estimating species tolerance to human perturbation: expert judgment versus quantitative approaches 140th Annual Meeting of the American Fisheries Society
(Pittsburgh, United States)
2010/08 The importance of inter-regional cooperation on river restoration: Ripidurable and Ricover case studies 7th European Conference on Ecological Restoration
(Avignon, France)
2010/07 Ecohydraulics of pool-type fishways: getting past the barriers 9th International Congress on the Biology of Fish
(Barcelona, Spain)
2010/07 Does the lack of longitudinal connectivity affect the distribution of potamodromous fish? 9th International Congress on the Biology of Fish
(Barcelona, Spain)
2010/07 Hydraulic efficiency of offset or straight orifices for the upstream movements of the Iberian barbel (Luciobarbus bocagei, Steindachner 1864) in an experimental pool-type fishway 9th International Congress on the Biology of Fish
(Barcelona, Spain)
2010/04 An integrated approach for restoring Mediterranean river systems: habitat quality, biological indicators and appropriate restoring techniques 11th Annual Network Conference - River Restoration: From Policy to Practice
(York, United Kingdom)
2010 Restoring Mediterranean river systems: assessing habitat quality, biological indicators and restoration scenarios XV Congresso da Associação Ibérica de Limnologia
(Ponta Delgada, Portugal)
2009/08 Monitoring seasonal and daily upstream movements of coarse fish through a fish pass using infrared technology 33rd IAHR Congress: Water Engineering for a Sustainable Environment
(Vancouver, Canada)
2009/08 Cumulative effect of enhancement measures to improve habitat of an endangered species, the Iberian nase (Iberochondrostoma almacai) 33rd IAHR World Congress
(Vancouver, Canada)
2009/03 Revisiting fish tolerance to human pressure: a case for Mediterranean rivers International Symposium: Improving the ecological status of fish communities in inland waters
(Hull, United Kingdom)
2009/03 Metric-based assessment of ecological quality of Western Mediterranean rivers using fish International Symposium: Improving the ecological status of fish communities in inland waters
(Hull, United Kingdom)
2009 Utilização de indicadores biológicos na requalificação de habitats Curso Requalificação Fluvial. Técnicas, Modelação Numérica e Casos de Estudo
(Lisboa, Portugal)
2008/06 Using a two-dimensional approach to evaluate channel rehabilitation in a Mediterranean stream 4th ECRR International Conference on River Restoration
(Venice, Italy)
2007/09 Local and regional determinants of fish distribution in Western Iberia 137th Symposium of the American Fisheries Society
(S. Francisco, United States)
2007/07 Response of four riverine biological communities to human pressure: identifying sentinels of change for restoration of a Mediterranean river 5th Symposium for European Freshwater Sciences
(Palermo, Italy)
2005/09 Efficacy of a nature-like bypass channel in a Portuguese lowland river World Conference on Ecological Restoration
(Zaragoza, Spain)
2005/05 Determining reference conditions in Western Iberia using macrophytes Annual Meeting of the North American Benthological Society
(New Orleans, United States)
1998/04 Fish community composition in an Iberian river basin in low and high discharge years: relative contributions of spatial and temporal environmental variations Ecology of Stream Fish: State of the Art and Future Prospects
(Luarca, Spain)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2024/01 - Current Water scarcity and salinity limit freshwater fish behaviour
Supervisor
 Engenharia do Ambiente (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023 - Current Flow-dependent ecosystem services: the role of small hydropower plants on river functions
Supervisor
 Gestão e Conservação de Recursos Naturais (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023 - Current Variação da temperatura da água e dos refúgios nos ecossistemas ribeirinhos de clima mediterrânico em Portugal
Co-supervisor
 Gestão e Conservação de Recursos Naturais (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/03/01 - Current Dealing with sediments in river morphology restoration projects
Supervisor
 Restauro e Gestão Fluvial (PhD)
Universidade de Lisboa Instituto de Investigação e Inovação em Engenharia Civil para a Sustentabilidade, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
2021/08/01 - Current Improving sustainability of fish populations downstream small hydropower plants
Supervisor of Renan Siqueira Leite de Andrade
 Restaurio e Gestão Fluvial (PhD)
Universidade de Lisboa Instituto de Investigação e Inovação em Engenharia Civil para a Sustentabilidade, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
2023 - 2023/06 Comparação experimental de ousadia e comportamento de agregação em peixes nativos e exóticos
Supervisor of Maria Rei Leal Mineiro Diogo
 Biologia (Degree)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023 - 2023/06 Comparação experimental da capacidade de transposição de pequenos obstáculos em diferentes espécies piscícolas em Portugal, num sistema de mesocosmos
Supervisor of Rui Pedro Marques Morais
 Biologia (Degree)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018/05 - 2023/04 Go with the flow: integrating dynamic and thermal regimes in regulated river management
Supervisor
 River Restoration and Management (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2021/10/15 - 2022/01/25 Avaliação dos efeitos do inseticida piretróide esfenvalerato na atividade comportamental de uma espécie piscícola exótica, o alburno (Alburnus alburnus), num sistema de mesocosmos
Supervisor of Margarida Pereira de Oliveira
 Engenharia do Ambiente (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2021/10/15 - 2022/01/24 Avaliação dos efeitos de um pesticida na atividade comportamental de uma espécie nativa, o barbo-comum (Luciobarbus bocagei), num sistema de mesocosmos
Supervisor of Inês Margarida Lopes Vieira
 Engenharia do Ambiente (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2016/01 - 2020/07/23 Permeability of small instream obstacles for upstream fish migration: learning from fish swimming performance and establishment of requalification measures
Supervisor of Susana Cristina Amador Dias Amaral
 Engenharia Florestal e dos Recursos Naturais (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009/11 - 2013/11 Connectivity and fish movements in a Mediterranean Basin: the interplay of spatial and temporal scales
Co-supervisor
 Engenharia Florestal e dos Recursos Naturais (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2012 - 2013 Modelação bidimensional de habitats fluviais para espécies piscícolas. Aplicação do modelo CasimirFish2D
Co-supervisor
 Engenharia Florestal e dos Recursos Naturais (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - 2010 Impacto da Pesca com explosivos na comunidade piscícola marinha no Município de Salinas de Margarida, Bahía, Brasil
Co-supervisor
 Gestão e Conservação dos Recursos Naturais (Master)
Universidade de Évora Departamento de Biologia, Portugal
2007 - 2007 Uso y preferencia del microhabitat del cacho de Arade Squalius aradensis: espécie endémica del sudoeste de Portugal, Arade
Co-supervisor
 Biologia (Degree)
Universitat de Barcelona Departament de Biologia Animal, Spain
2005 - 2005 Caracterização da situação de referência de sistemas fluviais portugueses com base nas comunidades piscícolas. Aplicação da Diretiva Quadro da Água
Co-supervisor
 Engenharia Florestal e dos Recursos Naturais (Degree)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2022/05/11 - Current Dia Aberto ISA 2022 - Atividade "Amostragem de peixes com recurso a pesca elétrica" (2022/05/11 - 2022/05/11)
Exhibition (Co-organisor)
 Universidade de Lisboa Centro de Estudos Florestais, Portugal
2021/10 - Current EcoPeak4Fish - Kickoff meeting Workshop (2021/10/28 - 2021/10/28)
Workshop (Co-organisor)
 Universidade de Lisboa Instituto de Investigação e Inovação em Engenharia Civil para a Sustentabilidade, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
2023/07/12 - 2023/07/12 Verão ULisboa 2023 - iniciativa "Amostragem de peixes com pesca elétrica" (2023/07/12 - 2023/07/12)
Exhibition (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/06 - 2023/06 Special Session: "River connectivity: processes, methods and case-studies" as part of the 13th Symposium for European Freshwater Sciences (2023/06/18 - 2023/06/23)
Symposium (Co-organisor)
 Universidade de Lisboa Centro de Estudos Florestais, Portugal
2023/05/26 - 2023/05/26 Dia Aberto ISA 2023 - Atividade "Amostragem de peixes com recurso a pesca elétrica" (2023/05/26 - 2023/05/26)
Exhibition (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/11/29 - 2022/11/29 7th Conference on Fluvial Restoration (2022/11/29 - 2022/11/29)
Workshop (Co-organisor)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2022/07/05 - 2022/07/14 Verão ULisboa 2022 - iniciativa "Amostragem de peixes com pesca elétrica" (2022/07/05 - 2022/07/14)
Exhibition (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/05/21 - 2022/05/21 World Fish Migration Day (2022 edition): Hiking through the river trails of Ribeira da Foz (Tagus basin) (2022/05/21 - 2022/05/21)
Other (President of the Organising Committee)
 Universidade de Lisboa Centro de Estudos Florestais, Portugal
2021/06/17 - 2021/06/17 Webinar: Invasive alien species in riverine ecosystems: from impacts to mitigation (2021/06/17 - 2021/06/17)
Workshop (President of the Organising Committee)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2021/05/14 - 2021/05/16 BioBlitz na Tapada - atividade "Peixes no âmbito do BioBlitz na Tapada" (2022/05/14 - 2022/05/16)
Exhibition (Other)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2020/10/24 - 2020/10/24 World Fish Migration Day (2020 edition): Use of fish passage models to improve connectivity for river fish (2020/10/24 - 2020/10/24)
Workshop (President of the Organising Committee)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2020/07/03 - 2020/07/03 2020 International Conference on River Connectivity (Fish Passage 2020), incorporating the AMBER & FITHYDRO EVENT - SMART WAYS TO IMPROVE CONNECTIVITY (2020/06/28 - 2020/07/03)
Conference (Member of the Organising Committee)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2019/11/28 - 2019/11/28 6th Conference on Fluvial Restoration (2019/11/28 - 2019/11/28)
Workshop (Co-organisor)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2018/07 - 2018/11 Effects of extreme events on the quality of water and ecosystems: from the impacts to mitigation (2018/11 - 2018/11)
Workshop (Co-organisor)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2018/04 - 2018/06 Fish Passage and Barriers (2018/06 - 2018/06)
Workshop (Co-organisor)
 Sociedade Ibérica de Ictiologia, Spain
2018/04/21 - 2018/04/21 World Fish Migration Day (2018 edition): Utilização de modelos experimentais como meios de teste de novas soluções para a migração de peixes (2018/04/21 - 2018/04/21)
Meeting (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Laboratório Nacional de Engenharia Civil, Portugal
2017/07 - 2017/12 5th Conference on Fluvial Restoration (2017/12 - 2017/12)
Workshop (Co-organisor)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2016/10 - 2017/01 Tools for Evaluation of the Ecological Quality in Rivers and Streams (2017/01 - 2017/01)
Workshop (Co-organisor)
 Associação Portuguesa dos Recursos Hídricos, Portugal
2016/05/21 - 2016/05/21 World Fish Migration Day (2016 edition): Fish passage experiments in the lab: testing fish movements performance through a vertical slot fishway (2016/05/21 - 2016/05/21)
Meeting (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Laboratório Nacional de Engenharia Civil, Portugal
2015/01 - 2015/07 Special Session: "Fish Movements in River Networks" as part of the 9th Symposium for European Freshwater Sciences (2015/07 - 2015/07)
Symposium (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2013/03 - 2014/06 5th Iberian Congress of Ichthyology: know to preserve (2014/06 - 2014/06)
Congress (Member of the Organising Committee)
 Sociedade Ibérica de Ictiologia, Spain
2014/05/24 - 2014/05/24 World Fish Migration Day (2014 edition): Melhorar a conectividade fluvial para os movimentos piscícolas: a importância do uso de modelos experimentais (2014/05/24 - 2014/05/24)
Meeting (Co-organisor)
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Laboratório Nacional de Engenharia Civil, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2024/03/25 Exploring the agricultural (Ground)Water-Nitrogen nexus: Are we using the right tools?
Thesis Member
 João Guilherme Valente Mendes Serra (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/12/21 Caracterização das comunidades de peixes nativos e não nativos em águas interiores da Península Ibérica
(Thesis) Main arguer
 Pedro Nunes Pacheco (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/07/31 Inland Wetlands in the Lower Tagus: land uses, habitat condition and fish communities
(Thesis) Main arguer
 Diogo Ramos Ramalho Ribeiro (Master)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2023/07/07 Estudo da riqueza específica de ictiofauna em bacias hidrográficas na Europa
(Thesis) Main arguer
 Miguel Ângelo Pinto da Silva (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/07 Comparação experimental de ousadia e comportamento de agregação em peixes nativos e exóticos
Thesis Member
 Maria Rei Leal Mineiro Diogo (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/07 Comparação experimental da capacidade de transposição de pequenos obstáculos em diferentes espécies piscícolas de Portugal, num sistema de mesocosmos
Thesis Member
 Rui Pedro Marques Morais (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2023/04/13 Go with the flow: managing rivers for migratory fish facing fragmentation and climate change
Supervisor
 Daniel Chagas Roquette Mameri (PhD)
Universidade de Lisboa Centro de Estudos Florestais, Portugal
2023/02 Effects of ash from native and alien plants on phytoplankton biomass and mosquito abundances: a mesocosm experiment
(Thesis) Arguer
 Takalani Netshituni (Master)
University of Venda, South Africa
2023 Efeito das culturas de cobertura na biodiversidade de artrópodes em sistemas agrários intensivos no Ribatejo
President of the jury
 José Manuel Luciano Fernandes Cotta (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/07 Comparação de traits ecológicos das espécies piscícolas nativas e exóticas da Europa
(Thesis) Main arguer
 Rúben Sanches Pires (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/07 Vulnerabilidade das comunidades de peixes de água doce em bacias hidrográficas na Europa
(Thesis) Main arguer
 Clarisse Cardeira Bastos (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2022/04 Characterization of sub-daily flow fluctuations as a basis for sustainable hydropeaking management
Thesis Member
 Franz Greimel (PhD)
Universität für Bodenkultur Wien, Austria
2022/02/25 Freshwater fish in a highly regulated Mediterranean basin: biological responses to environmental stressors and to fishways implementation
(Thesis) Arguer
 Ana Sánchez Pérez (PhD)
Universidad de Murcia Facultad de Biología, Spain
2022/01/24 Avaliação dos efeitos de um pesticida na atividade comportamental de uma espécie nativa, o barbo-comum (Luciobarbus bocagei), num sistema de mesocosmos
Supervisor
 Inês Margarida Lopes Vieira (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2021/09/17 Desarollo y aplicación de una nueva metodología para la evaluación de pasos para peces de estanques sucesivos
(Thesis) Main arguer
 Jorge Valbuena Castro (PhD)
Universidad de Valladolid Escuela Técnica Superior de Ingenierías Agrarias, Spain
2021/07/23 Avaliação do comportamento de espécies piscícolas Ibéricas de água doce perante estímulos acústicos e luminosos e o seu contributo para o desenvolvimento de uma barreira comportamental para peixes
President of the jury
 Joaquim José Barreira de Jesus (PhD)
Universidade de Vigo, Spain
2021/07 Localizar e Identificar os Impactes Gerais das Barragens nas Principais Bacias Hidrográficas da Europa
(Thesis) Main arguer
 Guilherme Chaves (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2021/07 Spatial distribution and physical characterization of the European Waterfalls
(Thesis) Main arguer
 Lara dos Santos Gonçalves (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2021 Ecohydraulic study of Iberian fish migration
Thesis Member
 Ana Garcia Vega (PhD)
Universidad de Valladolid, Spain
2020/07/23 Permeability of small weirs for upstream fish passage
Supervisor
 Susana Cristina Amador Dias Amaral (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2020/07 As ameaças listadas na Lista Vermelha da União Internacional para a Conservação da Natureza para espécies de peixes de água doce nativas da Europa têm validação científica?
(Thesis) Main arguer
 Afonso Luís Esteves Sá Teixeira (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2020/07 Caracterização Biológica das populações de Peixe-gato Europeu Silurus glanis do Baixo Tejo (Portugal)
(Thesis) Main arguer
 André Filipe Alípio dos Santos (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2020/06/19 Estudo do comportamento migratório da truta (Salmo trutta L.) no limite sul de sua distribuição
(Thesis) Main arguer
 Renan Siqueira Leite de Andrade (Master)
Universidade de Évora, Portugal
2019/12/19 Developing a low-cost fish passage solution for gauging weirs
(Thesis) Main arguer
 Daniella Montali-Ashworth (PhD)
University of Southampton Faculty of Engineering and the Environment, United Kingdom
2019/07 Efeitos dos regimes de inundação nas comunidades de aves terrestres da Amazónia
(Thesis) Main arguer
 Tiago Miguel Pires Mendes Jorge (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2019/07 Determinantes ambientais e socioeconómicos das invasões aviárias
(Thesis) Main arguer
 Marta Cardoso Ferreira (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2019/07 Efeito do fogo da Mata Nacional de Leiria nas comunidades piscícolas do Ribeiro de São Pedro
(Thesis) Main arguer
 José António Afonso Nunes (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2019/07 Determinantes socioeconómicos e ambientais do sucesso de invasões aviárias: uma abordagem global
(Thesis) Main arguer
 Diana Maria Roussado Batalha (PhD)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018/07 Efeito do fogo da Mata Nacional de Leiria nas comunidades piscícolas do Ribeiro de São Pedro
(Thesis) Main arguer
 Constança Maria de Vaissier Ferro Marques Martins (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018/07 Avaliação dos impactos do fogo em anfíbios: o caso de estudo da Mata de Leiria
(Thesis) Main arguer
 Ana Rita Cândido dos Santos (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018 Assessment and development of vertical slot fishways for Iberian cyprinids
(Thesis) Arguer
 Filipe Alexandre da Silva Romão (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2017/12/06 Patrones de uso del hábitat para la especie en peligro crítico saramugo (anaecypris hispanica) y la especie invasiva Alburno (Alburnus alburnus). interacciones negativas potenciales
(Thesis) Main arguer
 Cristina Yajaira Jines Mufroz (Master)
Universidade de Évora, Portugal
2017/07 Monitorização de comunidades aquáticas em estações de biodiversidade associadas a eucaliptais certificados: O papel das boas práticas florestais na conservação da biodiversidade aquática em eucaliptais certificados.
(Thesis) Main arguer
 João Carlos Ferreira Paulo Paulino (Other)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2017 Comportamento da lampreia-marinha (Petromyzon marinus) na abordagem a duas tipologias de passagens para peixes
(Thesis) Main arguer
 Roberto Luís Pateiro de Oliveira (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2016 Factors influencing the use of road-crossing culverts by carnivores
(Thesis) Main arguer
 João Paulo Martinho Craveiro (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2016 Multivariate approaches in species distribution modelling: application to native fish species in Mediterranean rivers
Thesis Member
 Rafael Muñoz Mas (PhD)
Universitat Politècnica de València, Spain
2014 Estudo de abrigos para peixes a jusante de centrais hidroelétricas. Modelação numérica dos escoamentos
(Thesis) Arguer
 Rui Tiago Pessoa Zabelo Matos de Almeida (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 Activity, distribution and microhabitat use by the imperilled Mira chub Squalius torgalensis
(Thesis) Main arguer
 Joana Maria Sofio Martelo Callapez Martins (PhD)
Universidade de Lisboa Faculdade de Ciências, Portugal
2012 Avaliação Ecohidrológica de Caudais Modificados e de Caudais Ecológicos em Troços de Rios Altamente Modificados
(Thesis) Main arguer
 João Pedro Fernandes Farinha de Oliveira Martins (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2012 Planeamento de Restauro Fluvial da Bacia do rio Alcoa
(Thesis) Main arguer
 Luís Guilherme Pereira Antunes de Freitas (Master)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 Determinação das velocidades críticas de natação da boga-comum (Pseudochondrostoma polylepis Steindachner, 1865) e do escalo do Norte (Squalius carolitertii Doadrio, 1988)
(Thesis) Main arguer
 Filipe Alexandre Silva Romão (Master)
Universidade de Évora, Portugal

Association member

Society Organization name Role
2018/01 - Current Portuguese Association of Water Resources (APRH) Member
2012 - Current Iberian Society of Ichthyology (SIBIC) Member
2010 - Current Associação Nacional de Investigadores em Ciência e Tecnologia (ANICT) Member
2009 - Current International Association for Hydro-Environment Engineering and Research (IAHR) Member

Committee member

Activity description
Role 		Institution / Organization
2018/01 - Current Committee of the Ecosystems and Water Quality
President / Vice-president
 Associação Portuguesa dos Recursos Hídricos, Portugal
2018 - Current Committee of the Water, Agriculture and Forests
Member
 Associação Portuguesa dos Recursos Hídricos, Portugal
2010 - 2017 Committee of the Ecosystems and Water Quality
Member
 Associação Portuguesa dos Recursos Hídricos, Portugal

Conference scientific committee

Conference name Conference host
2022/01/01 - Current IX Iberian Congress of Ichthyology SIBIC
2019/01 - Current 14º Simpósio de Hidráulica e Recursos Hídricos dos Países de Língua Portuguesa Praia, Cape Verde
2024/06/04 - 2024/06/07 8th Europe Congress of the International Association for Hydro-Environment Engineering and Research (IAHR) International Association for Hydro-Environment Engineering and Research (IAHR)
2024/05/16 - 2024/05/18 Água - Desafios do Futuro Associação Portuguesa dos Recursos Hídricos, Universidade do Algarve, Faro
2023 - 2023 16º Congresso da Água Associação Portuguesa dos Recursos Hídricos (APRH)
2022/01 - 2022 39th IAHR World Congress IAHR
2021/03/25 - 2021/03/28 15º Congresso da Água Associação Portuguesa dos Recursos Hídricos (APRH)
2018 - 2018 International Symposium on Ecohydraulics (ISE) Tokyo, Japan
2018 - 2018 Symposium for the conservation of Freshwater Fish and Habitat Rehabilitation Évora, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2022 - Current Seminar I Gestão e Conservação dos Recursos Naturais (Mestrado) Universidade de Lisboa Centro de Estudos Florestais, Portugal
2019 - Current Environmental Modelling Engenharia do Ambiente (Mestrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018 - Current Project Engenharia do Ambiente (Mestrado integrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2016 - Current River Ecosystem Functioning and Monitoring River Restoration and Management (Curso de doutoramento (conclusão de unidades curriculares)) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2016 - Current Environmental Impact Assessment Engenharia do Ambiente (Mestrado integrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2011 - Current Ecosystems Monitoring Engenharia do Ambiente (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2010 - Current Ecology (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - Current Management and Conservation of Freshwater Ecosystems Gestão e Conservação de Recursos Naturais (Mestrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2008 - Current Ecology and Management of Animal Populations Gestão e Conservação de Recursos Naturais (Mestrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2018 - 2018 Fish Passage and Barriers (Outros) Universidade do Algarve, Portugal
2011 - 2017 Fisheries and Game Management Gestão e Conservação de Recursos Naturais (Mestrado) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - 2016 Animal Biology Biologia (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - 2013 Animal Resources Engenharia Florestal e dos Recursos Naturais (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - 2010 Biodiversity and Conservation Biologia (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2007 - 2010 Management of Habitats and Animal Resources Engenharia Florestal e dos Recursos Naturais (Licenciatura) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2009 - 2009 Requalificação fluvial: técnicas, modelação numérica e casos de estudo (Especialização pós-licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2022/03 - 2022/03 Evaluator of the first call of CIVIS3i (Alliance Programme for International, Interdisciplinary, Intersectoral Research and Training for Experienced Researchers) MSCA-H2020-COFUND (post-doctoral fellowship programme)
Evaluator
 Aix-Marseille Université, France European Union
2020/05 - 2020/06 Evaluator of the "Advancing Technical Solutions for Downstream Migration of European Key Umbrella Fish Species" for the Swiss National Science Foundation
Evaluator
 Universidade de Lisboa Instituto Superior de Agronomia, Portugal Schweizerischer Nationalfonds zur Förderung der wissenschaftlichen Forschung

Journal scientific committee

Journal title (ISSN) Publisher
2023/01 - Current Fisheries Management and Ecology (1365-2400) Wiley
2022/12 - Current Aquatic Conservation: Marine and Freshwater Ecosystems Wiley
2022/10 - Current Facets Canadian Science Publishing
2022/09 - Current Hydrological Processes (1099-1085) Wiley
2022 - Current Transactions of the American Fisheries Society Wiley
2021 - Current Toxics (2305-6304)
2021 - Current Water Resources Research (1944-7973) Wiley
2021 - Current Conservation Science and Practice (2578-4854) Wiley
2021 - Current Freshwater Biology (1365-2427) Wiley
2021 - Current Frontiers in Environmental Science (2296-665X) Frontiers
2021 - Current Frontiers in Ecology and Evolution (2296-701X) Frontiers
2021 - Current Restoration Ecology (1526-100X) Wiley
2021 - Current Global Ecology and Conservation (2351-9894) Elsevier
2020 - Current Resources (2079-9276) mdpi
2020 - Current Animals (2076-2615) mdpi
2020 - Current Sustainable Energy Technologies and Assessments (2213-1388) Elsevier
2020 - Current Environments (2076-3298) mdpi
2020 - Current Egyptian Journal of Aquatic Research (1687-4285) Elsevier
2020 - Current Life (2075-1729) mdpi
2020 - Current Biology (2079-7737) mdpi
2020 - Current Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology (1095-6433) Elsevier
2020 - Current Marine Biology (1432-1793) Springer
2020 - Current Zoologischer Anzeiger (0044-5231) Elsevier
2019/12 - Current ISPRS International Journal of Geo-Information (2220-9964) MDPI AG
2019 - Current Journal of Marine Science and Engineering (2077-1312) MDPI AG
2019 - Current Mathematics (2227-7390) MDPI AG
2019 - Current Pathogens (2076-0817) MDPI AG
2019 - Current Polymers (2073-4360) MDPI AG
2019 - Current Heliyon (2405-8440) Elsevier
2019 - Current Global Journal of Ecology (2641-3094) Peertechz Publications Private Limited
2019 - Current Entropy (1099-4300) MDPI AG
2018 - Current International Journal of Environmental Research and Public Health (1660-4601) MDPI AG
2018 - Current Fisheries Research (0165-7836) Elsevier
2018 - Current Fishes (2410-3888) MDPI AG
2018 - Current Karbala International Journal of Modern Science (2405-609X) Elsevier
2018 - Current Applied Sciences (2076-3417) MDPI AG
2018 - Current Cells (2073-4409) MDPI AG
2018 - Current Diversity (1424-2818) MDPI
2018 - Current Journal of Aquaculture Engineering and Fisheries Research (2149-0236) Scientific Web Journals (SWJ)
2018 - Current Knowledge and Management of Aquatic Ecosystems (1961-9502) EDP Sciences
2018 - Current Limnologica (0075-9511) Elsevier
2018 - Current Marine and Freshwater Research (1323-1650) CSIRO Publishing
2018 - Current Revista de Ciências Agrárias (2183-041X) Sociedade de Ciencias Agrarias de Portugal
2017 - Current Ecological Informatics (1574-9541) Elsevier
2017 - Current Aquaculture Environment Interactions (1869-7534) Inter-Research Science Center
2017 - Current Ecohydrology (1936-0592) Wiley (John Wiley & Sons)
2017 - Current FiSHMED: Fishes in Mediterranean Environments (2386-8228) SIBIC
2017 - Current Hydrology (2306-5338) MDPI AG
2016 - Current Water ( 2073-4441) MDPI
2016 - Current Journal of Ecohydraulics (2470-5365) Informa UK (Taylor & Francis)
2016 - Current Sustainability (2071-1050) MDPI
2016 - Current Limnetica (0213-8409) Associação Ibérica de Limnologia
2016 - Current Aquatic Sciences (1420-9055) Springer-Verlag
2015 - Current Hydrobiologia (1573-5117) Springer-Verlag
2015 - Current The Science of The Total Environment (0048-9697) Elsevier
2013 - Current PLoS ONE (1932-6203) Public Library of Science
2011 - Current River Research and Applications (1535-1467) Wiley (John Wiley & Sons)
2011 - Current Ecological Engineering (0925-8574) Elsevier
2010 - Current Journal of Applied Ichthyology (1439-0426) Wiley (Blackwell Publishing)
2010 - Current Neotropical Ichthyology (1679-6225) SciELO
2009 - Current Ecology Of Freshwater Fish (1600-0633) Wiley (Blackwell Publishing)
2009 - Current Environmental Biology of Fishes (1573-5133) Springer-Verlag
2008 - Current ZOOLOGICAL SCIENCE (0289-0003) BioOne (Zoological Society of Japan)
2007 - Current Journal of Fish Biology (1095-8649) Wiley (Blackwell Publishing)
2024/01 - 2024/01 Ecohydrology and Hydrobiology ( 2080-3397) Elsevier
2023 - 2023 Ecotoxicology and Environmental Safety (1090-2414) Elsevier

Other jury / evaluation

Activity description Institution / Organization
2024/08 - 2024/08 MERLIN Innovation Awards 2024. These awards were launched by the H2020 Merlin project (Mainstreaming Ecological Restoration of freshwater-related ecosystems in a Landscape context: Innovation, upscaling and transformation Connectology, Portugal
2023/02/15 - 2023/02/15 MERLIN Innovation Awards 2023. These awards were launched by the H2020 Merlin project (Mainstreaming Ecological Restoration of freshwater-related ecosystems in a Landscape context: Innovation, upscaling and transformation Connectology, Portugal
2016 - 2016 Fluviário Award (Prémio Fluviário) - This award intends to distinguish a student (PhD, MSc, BSc) who has published as first author an article (SCI magazine) in the year to which the contest refers in the theme conservation and biodiversity of continental aquatic resources (estuaries and rivers). Fluviário de Mora, Portugal
2013 - 2013 Fluviário Award (Prémio Fluviário) - This award intends to distinguish a student (PhD, MSc, BSc) who has published as first author an article (SCI magazine) in the year to which the contest refers in the theme conservation and biodiversity of continental aquatic resources (estuaries and rivers). Fluviário de Mora, Portugal
Distinctions

Award

2020 ULisboa / CGD Scientific Awards 2019 (Main Award in Agricultural, Forestry and Fisheries Sciences)
Universidade de Lisoba / Caixa Geral de Depósitos, Portugal
2020 Fluviário Award (co-author of awarded article by Daniel Mameri)
Fluviário de Mora, Portugal
2019 ULisboa / Santander Scientific Awards 2018 (Honorable Mention in Agricultural, Forestry and Fisheries Sciences)
Universidade de Lisboa / Banco Santander Totta, Portugal
2019 Top Reviewer in Environment and Ecology (Global Peer Review Awards)
Web of Science Group, United Kingdom
2019 Excellent Reviewer (Global Peer Review Awards)
Web of Science Group, United Kingdom
2019 Top Reviewer in Cross-field (Global Peer Review Awards)
Web of Science Group, United Kingdom
2018 Top Reviewer for Environment/Ecology
Publons, United Kingdom
2017 Top Reviewer for "Water"
Publons, United Kingdom
2016 Award for Best Student Paper 2016: Susana Amaral
Journal of Ecohydraulics, Spain