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Identification

Personal identification

Full name
Pedro Rodrigues Frade

Citation names

  • Frade, Pedro R.

Author identifiers

Ciência ID
B81F-83F1-BB9B
ORCID iD
0000-0002-4010-255X

Email addresses

  • prfrade@ualg.pt (Professional)
  • pedro.frade@nhm-wien.ac.at (Professional)

Addresses

  • Natural History Museum Vienna; Burgring 7, 1010, Vienna, Vienna, Austria (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Marine Biology
  • Natural sciences - Biological Sciences - Molecular Biology
  • Natural sciences - Biological Sciences - Ecology

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
Spanish; Castilian Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
German Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2)
French Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Dutch Beginner (A1) Beginner (A1) Beginner (A1) Beginner (A1) Beginner (A1)
Education
Degree Classification
2009
Concluded
PhD (Doutoramento)
Universiteit van Amsterdam, Netherlands
"Corals through the light – Phylogenetics, functional diversity and adaptive strategies of coral-symbiont associations over a large depth range" (THESIS/DISSERTATION)
n/a
2002/10/15
Concluded
Biologia Aplicada aos Recursos Animais (Licenciatura)
Universidade de Lisboa Faculdade de Ciências, Portugal
"Coral population structures in marginal environments: the inland bays of Curaçao, Netherlands Antilles" (THESIS/DISSERTATION)
17
Affiliation

Teaching in Higher Education

Category
Host institution
Employer
2021/01 - Current Invited Assistant Professor (University Teacher) Universidade do Algarve, Portugal
Universidade do Algarve, Portugal

Positions / Appointments

Category
Host institution
Employer
2020/07/01 - Current Curator of Invertebrate Zoology Naturhistorisches Museum Wien, Austria
Naturhistorisches Museum Wien, Austria

Others

Category
Host institution
Employer
2016/02/01 - 2020/06/30 Postdoctoral Researcher Centro de Ciências do Mar, Portugal
2011/06/01 - 2015/12/31 Postdoctoral researcher Universität Wien Department für Limnologie und Ozeanographie, Austria
2010/06/01 - 2010/11/01 Postdoctoral researcher Universidad Nacional Autonoma de Mexico Instituto de Ciencias del Mar y Limnología Unidad Académica Mazatlán, Mexico
2004/05/01 - 2009/06/01 PhD student Koninklijk Nederlands Instituut voor Onderzoek der Zee, Netherlands
2003/08/01 - 2004/03/01 Bolsa de Iniciação à Investigação Científica Universidade dos Açores Departamento de Oceanografia e Pescas, Portugal
Projects

Grant

Designation Funders
2016/02/01 - Current Coral’s Gastric Cavity: a bioreactor for microbe-driven metabolic pathways
SFRH/BPD/110285/2015
Principal investigator
Centro de Ciências do Mar, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2014/08/01 - 2015/12/31 COSMIC - Coral Surface Microlayer: production and dynamics of mucus-associated microbial communities
299320
Principal investigator
Universität Wien Department für Limnologie und Ozeanographie, Austria
European Research Council
Concluded
2011/06/01 - 2013/07/31 COral Surface MICrolayer: production and dynamics of mucus-associated microbial communities
M1363-B20
Principal investigator
Universität Wien Department für Limnologie und Ozeanographie, Austria
Fonds zur Förderung der wissenschaftlichen Forschung
Concluded
2004/06 - 2008/06 PhD Fellowship
SFRH/BD/13382/2003
Portuguese Science and Technology Foundation

Contract

Designation Funders
2017/06/01 - Current Marine invertebrates and their associated microbial communities
unknown
Invited Scientist Fellow
James Cook University, Australia
Beijing Genome Institute-Shenzhen
Ongoing
2018/09/01 - 2019/01/31 Reviewing microbial communities on the GBR: contribution to a functioning reef
unknown
Invited Scientist Fellow
James Cook University, Australia
National Environmental Science Programme
Concluded

Other

Designation Funders
2016/02/01 - 2020/02/01 Marine Microbes
unknown
Invited Scientist Fellow
Australian Institute of Marine Science, Australia
Ongoing
2012/09 - 2016/05 Catlin Seaview Survey and XL Catlin Seaview Survey
unknown
Invited Scientist Fellow
University of Queensland, Australia
Outputs

Publications

Book
  1. Frade, Pedro. Corals through the light. Netherlands. 2009.
    Published
Book chapter
  1. Frade, P. R.; Bongaerts, P.; Baldwin, C. C.; Trembanis, A. C.; Bak, R. P. M.; Vermeij, M. J. A.. "The mesophotic coral ecosystems of Bonaire and Curaçao". In Coral Reefs of the World Series: Mesophotic Coral Ecosystems, edited by Loya, Y.; Puglise, K.; Bridge, T.. Springer, 2019.
    Published
Journal article
  1. Marchioro, Giulia M.; Glasl, Bettina; Engelen, Aschwin H.; Serrão, Ester A.; Bourne, David G.; Webster, Nicole S.; Frade, Pedro R.. "Microbiome dynamics in the tissue and mucus of acroporid corals differ in relation to host and environmental parameters". PeerJ 8 (2020): e9644. http://dx.doi.org/10.7717/peerj.9644.
    Open access • 10.7717/peerj.9644
  2. Frade, Pedro R.; Glasl, Bettina; Matthews, Samuel A.; Mellin, Camille; Serrão, Ester A.; Wolfe, Kennedy; Mumby, Peter J.; Webster, Nicole S.; Bourne, David G.. "Spatial patterns of microbial communities across surface waters of the Great Barrier Reef". Communications Biology 3 1 (2020): http://dx.doi.org/10.1038/s42003-020-01166-y.
    Open access • 10.1038/s42003-020-01166-y
  3. Glasl, Bettina; Robbins, Steven; Frade, Pedro R.; Marangon, Emma; Laffy, Patrick W.; Bourne, David G.; Webster, Nicole S.. "Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes". The ISME Journal 14 6 (2020): 1435-1450. http://dx.doi.org/10.1038/s41396-020-0622-6.
    Open access • 10.1038/s41396-020-0622-6
  4. Paul O'Brien; Shangjin Tan; Chentao Yang; Frade, Pedro R.; Nikos Andreakis; Hillary A. Smith; David J. Miller; et al. "Diverse coral reef invertebrates exhibit patterns of phylosymbiosis". The ISME Journal (2020):
    Accepted
  5. Kennedy Wolfe; Ken Anthony; Russell C. Babcock; Line Bay; David G. Bourne; Damien Burrows; Maria Byrne; et al. "Priority species to support the functional integrity of coral reefs". Oceanography and Marine Biology: An Annual Review 58 (2020):
    In press
  6. Glasl, B.; Bourne, D. G.; Frade, P. R.; Thomas, T.; Schaffelke, B.; Webster, N. S.. "Microbial predictors of environmental perturbations in coral reef ecosystems". Microbiome 7 94 (2019):
    Published
  7. Pedro R. Frade; Pim Bongaerts; Norbert Englebert; Alice Rogers; Manuel Gonzalez-Rivero; Ove Hoegh-Guldberg. "Deep reefs of the Great Barrier Reef offer limited thermal refuge during mass coral bleaching". Nature Communications 9 1 (2018): 3447. https://doi.org/10.1038/s41467-018-05741-0.
    Published • 10.1038/s41467-018-05741-0
  8. Frade, Pedro. "Host differentiation and compartmentalization of microbial communities in the azooxanthellate cupcorals Tubastrea coccinea and Rhizopsammia goesi in the Caribbean". Frontiers in Marine Science 5 (2018): 391.
    Published • 10.3389/fmars.2018.00391
  9. Frade, Pedro. "Morphological and genetic divergence between the Mediterranean and Caribbean populations of Madracis pharensis (Heller 1868): too much for one species?". Zootaxa 4471 (2018): 473-492.
    Published • 10.11646/zootaxa.4471.3.3
  10. Frade, Pedro. "Adaptation to reef habitats through selection on the coral animal and its associated microbiome". Molecular Ecology 27 (2018): 2956-2971.
    Published • 10.1111/mec.14763
  11. Glasl, Bettina; Bourne, David G; Frade, Pedro R; Webster, Nicole S. "Establishing microbial baselines to identify indicators of coral reef health". Microbiology Australia (2018): http://dx.doi.org/10.1071/ma18011.
    Published • 10.1071/ma18011
  12. Glasl, B.; Bongaerts, P.; Elisabeth, N.H.; Hoegh-Guldberg, O.; Herndl, G.J.; Frade, P.R.. "Microbiome variation in corals with distinct depth distribution ranges across a shallow–mesophotic gradient (15–85 m)". Coral Reefs 36 (2017): 447-452. http://www.scopus.com/inward/record.url?eid=2-s2.0-85009227816&partnerID=MN8TOARS.
    Published • 10.1007/s00338-016-1517-x
  13. Glasl B; Herndl GJ; Frade PR. "The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance.". The ISME Journal 10 (2016): 2280-2292. http://europepmc.org/abstract/med/26953605.
    Published • 10.1038/ismej.2016.9
  14. Goldammer H; Hollergschwandtner E; Elisabeth NH; Frade PR; Reipert S. "Automatized Freeze Substitution of Algae Accelerated by a Novel Agitation Module.". Protist 167 (2016): 369-376. http://europepmc.org/abstract/med/27434544.
    Published • 10.1016/j.protis.2016.06.002
  15. Frade PR; Roll K; Bergauer K; Herndl GJ. "Archaeal and Bacterial Communities Associated with the Surface Mucus of Caribbean Corals Differ in Their Degree of Host Specificity and Community Turnover Over Reefs.". PLoS ONE 11 1 (2016): e0144702. http://europepmc.org/abstract/med/26788724.
    Published • 10.1371/journal.pone.0144702
  16. Frade, P.R.; Schwaninger, V.; Glasl, B.; Sintes, E.; Hill, R.W.; Simó, R.; Herndl, G.J.. "Dimethylsulfoniopropionate in corals and its interrelations with bacterial assemblages in coral surface mucus". Environmental Chemistry 13 2 (2016): 252-265. http://www.scopus.com/inward/record.url?eid=2-s2.0-84961575642&partnerID=MN8TOARS.
    Published • 10.1071/EN15023
  17. Bongaerts P; Carmichael M; Hay KB; Tonk L; Frade PR; Hoegh-Guldberg O. "Prevalent endosymbiont zonation shapes the depth distributions of scleractinian coral species.". Royal Society Open Science 2 (2015): 140297. http://europepmc.org/abstract/med/26064597.
    Published • 10.1098/rsos.140297
  18. Bongaerts, P.; Frade, P.R.; Hay, K.B.; Englebert, N.; Latijnhouwers, K.R.W.; Bak, R.P.M.; Vermeij, M.J.A.; Hoegh-Guldberg, O.. "Deep down on a Caribbean reef: Lower mesophotic depths harbor a specialized coral-endosymbiont community". Scientific Reports 5 (2015): 7652. http://www.scopus.com/inward/record.url?eid=2-s2.0-84937713891&partnerID=MN8TOARS.
    Published • 10.1038/srep07652
  19. Vermeij, M. J. A.; Frade, P. R.; Bak, R.P.M.. "Zooxanthellae presence acts as a settlement cue for aposymbiotic planulae of the Caribbean CoralMontastraea faveolata". Caribbean Journal of Science 47 1 (2013): 31-36. http://dx.doi.org/10.18475/cjos.v47i1.a4.
    Published • 10.18475/cjos.v47i1.a4
  20. Filatov, M.V.; Frade, P.R.; Bak, R.P.M.; Vermeij, M.J.A.; Kaandorp, J.A.. "Comparison between Colony Morphology and Molecular Phylogeny in the Caribbean Scleractinian Coral Genus Madracis". PLoS ONE 8 8 (2013): e71287. http://www.scopus.com/inward/record.url?eid=2-s2.0-84881525207&partnerID=MN8TOARS.
    Published • 10.1371/journal.pone.0071287
  21. Bongaerts, P.; Frade, P.R.; Ogier, J.J.; Hay, K.B.; Van Bleijswijk, J.; Englebert, N.; Vermeij, M.J.; et al. "Sharing the slope: Depth partitioning of agariciid corals and associated Symbiodinium across shallow and mesophotic habitats (2-60 m) on a Caribbean reef". BMC Evolutionary Biology 13 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84884376186&partnerID=MN8TOARS.
    Published • 10.1186/1471-2148-13-205
  22. Frade PR; Reyes-Nivia MC; Faria J; Kaandorp JA; Luttikhuizen PC; Bak RP. "Semi-permeable species boundaries in the coral genus Madracis: introgression in a brooding coral system". Molecular Phylogenetics and Evolution 57 (2010): 1072-1090. http://europepmc.org/abstract/med/20863897.
    Published • 10.1016/j.ympev.2010.09.010
  23. Hill, R.W.; Li, C.; Jones, A.D.; Gunn, J.P.; Frade, P.R.. "Abundant betaines in reef-building corals and ecological indicators of a photoprotective role". Coral Reefs 29 4 (2010): 869-880. http://www.scopus.com/inward/record.url?eid=2-s2.0-78649317662&partnerID=MN8TOARS.
    Published • 10.1007/s00338-010-0662-x
  24. Frade PR; De Jongh F; Vermeulen F; van Bleijswijk J; Bak RP; Frade, P.R.; De Jongh, F.; et al. "Variation in symbiont distribution between closely related coral species over large depth ranges.". Molecular Ecology 17 2 (2008): 691-703. http://europepmc.org/abstract/med/18179427.
    Published • 10.1111/j.1365-294x.2007.03612.x
  25. Frade, P.R.; Bongaerts, P.; Winkelhagen, A.J.S.; Tonk, L.; Bak, R.P.M.. "In situ photobiology of corals over large depth ranges: A multivariate analysis on the roles of environment, host, and algal symbiont". Limnology and Oceanography 53 6 (2008): 2711-2723. http://www.scopus.com/inward/record.url?eid=2-s2.0-55749115818&partnerID=MN8TOARS.
    Published
  26. Frade, P.R.; Englebert, N.; Faria, J.; Visser, P.M.; Bak, R.P.M.. "Distribution and photobiology of Symbiodinium types in different light environments for three colour morphs of the coral Madracis pharensis: Is there more to it than total irradiance?". Coral Reefs 27 4 (2008): 913-925. http://www.scopus.com/inward/record.url?eid=2-s2.0-55349133354&partnerID=MN8TOARS.
    Published • 10.1007/s00338-008-0406-3
  27. Vermeij, M.J.A.; Frade, P.R.; Jacinto, R.I.R.; Debrot, A.O.; Bak, R.P.M.. "Effects of reproductive mode on habitat-related differences in the population structure of eight Caribbean coral species". Marine Ecology Progress Series 351 (2007): 91-102. http://www.scopus.com/inward/record.url?eid=2-s2.0-38149071798&partnerID=MN8TOARS.
    Published • 10.3354/meps07085
Online resource
  1. Frade, Pedro R.. The deeply appalling condition of the Great Barrier Reef. 2018. https://natureecoevocommunity.nature.com/users/170958-pedro-r-frade/posts/38391-the-deeply-appalling-condition-of-the-great-barrier-reef.

Artistic / Performance

Video recording
  1. Frade, Pedro R.; Roman Hansi (Director). 2015. Scopulum Anima - Reef Soul. Trailler was exhibited at the Planetarium of the Natural History Museum in Vienna.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2021/03/04 Codiversification and biodiversity loss in reef-building corals 22nd Meeting of the Society for Biological Systematics
University of Bonn (Bonn, Germany)
2019/08/02 Exploring the distribution and diagnostic power of microbiomes across the Great Barrier Reef towards the implementation of microbial observatories 15th European Ecological Federation Congress
University of Lisbon (Lisboa, Portugal)
2018/06/19 The role of coral-associated microbial communities on host distribution and adaptation across mesophotic depths Gordon Research Conference on Mesophotic Coral Reefs
Gordon Research Conference (Maine, United States)
2017/11/21 A microbial perspective on the coral holobiont: host compartments, microbial successions and adaptations to the mesophotic environment ARC Centre of Excellence for Coral Reef Studies
James Cook University (Townsville, Australia)
2017/02/13 Microbial successions within distinct compartments of the coral holobiont and their relation to coral health 1st Australian Microbial Ecology Conference (AusME)
Australian Society for Microbiology (Melbourne, Australia)
2015/12/02 Keystone host-microbe interactions within the coral holobiont and their ecological significance Mini-Symposium “Coral Reef Functioning”
NIOZ Royal Netherlands Institute of Sea Research (Netherlands)
2015/05/22 Coral dimethylsulfoniopropionate: responses to light and stress, and interrelations with bacterial assemblages in surface mucus 37th Scientific Meeting of the Association of Marine Laboratories of the Caribbean (AMLC)
CARMABI Foundation (Curaçao)
2014/05/13 Linking the composition of coral surface mucus to the structure and function of its associated microbial biofilm community Biofilms6
University of Vienna (Austria)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2021/01 - Current Insights from the past: How has the diversity and community composition of coral symbionts changed since the late 19th century?
Co-supervisor
Universität Wien, Austria
2020/10 - Current Investigating green sea turtle diets and digestive microbiomes using DNA metabarcoding
Supervisor
Universidade do Algarve, Portugal
2019/06 - Current Microbiomes in the trophic ecology of marine herbivores (focus on green turtles)
Supervisor
Marine Biology (PhD)
Universidade do Algarve - Campus de Gambelas, Portugal
2017/06 - Current Co-evolution between marine invertebrates and their microbiomes
Co-supervisor
James Cook University, Australia
2016/06 - Current Manipulating the coral microbiome to increase thermal tolerance of reef corals
Co-supervisor
2019/11 - 2020/10 Taxonomic and functional microbial dynamics of Sargassum surface biofilms and their response to the coral reef environment
Supervisor
Universidade do Algarve - Campus de Gambelas, Portugal
2018/10 - 2019/06 Coupling shifts in the composition of coral tissue- and mucus-associated microbial communities to changes in coral host physiology and environmental fluctuations
Supervisor
Centro de Ciências do Mar, Portugal
2004 - 2019 Supervisor of 20 MSc students, both in the lab and in the field, including thesis guidance and final grading (University of Amsterdam, University of Lisboa, University of Vienna, University of Innsbruck, University of South Denmark, University of Algarve).
Supervisor
2013/01 - 2017/12 Ecology of mesophotic coral reefs
Co-supervisor
University of Queensland, Australia
2014 - 2015 The core microbiome of coral surface mucus plays a key role in mediating holobiont health and survival upon disturbance
Supervisor
Universität Wien Department für Limnologie und Ozeanographie, Austria
2013 - 2014 Dimethylsulfoniopropionate (DMSP) and DMSP-degrading bacteria in corals
Supervisor
Universität Innsbruck Fakultät für Biologie, Austria
2006 - 2007 Do morphospecies in the genus Madracis correspond to genetically distinct units?
Supervisor
Universiteit van Amsterdam Institute for Biodiversity and Ecosystem Dynamics, Netherlands
2006 - 2007 Genetic variation of Symbiodinium in the Caribbean coral genus Madracis
Supervisor
Universidade de Lisboa Faculdade de Ciências, Portugal
2004 - 2005 Photo-acclimation and adaptation of a depth generalist Symbiodinium type in the coral genus Madracis
Supervisor
Universiteit van Amsterdam Institute for Biodiversity and Ecosystem Dynamics, Netherlands

Universiteit Utrecht, Netherlands

Event organisation

Event name
Type of event (Role)
Institution / Organization
2016 - 2018 Member of the science team running the citizen-science project “Earthwatch”, which involves the general public on field activities of scientists monitoring the effects of cyclones on coral reefs (2014)
Workshop
James Cook University College of Science and Engineering, Australia
2015/10/28 - 2015/10/29 AutReef2015, a workshop on reef research made in Austria (2015/10/28 - 2015/10/29)
Conference (President of the Organising Committee)
Vienna Natural History Museum (NHM), Austria

Event participation

Activity description
Type of event
Event name
Institution / Organization
2019/09 - Current Invited speaker at the ProjectAR event, organized by the Champalimaud Foundation in Lisbon, Portugal, as coral expert commenting on the documentary “Chasing Coral” (events.ar.fchampalimaud.org/chasingcoral/)
Round table
ProjectAR
Fundação Champalimaud, Portugal

Conference scientific committee

Conference name Conference host
2015/05/18 - 2015/05/22 37th Scientific Meeting of the Association of Marine Laboratories of the Caribbean (AMLC) CARMABI Foundation

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2020 - Current Coral Reef Ecology Marine Biology MSc (Mestrado) Universidade do Algarve, Portugal
2018/05 - 2018/05 Impacts of climate change on reefs: temperature and acidification Life History and Evolution of Reef Corals (Bachelor) James Cook University College of Science and Engineering, Australia
2011 - 2012 Coral Reef Ecosystems MSc in Biological Science (Master) Universiteit van Amsterdam, Netherlands

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2019/08 Interview with reporter Joana Moreira, Beauty Editor of “Vogue Portugal”, for an article about “Coral bleaching and the effect of sunscreens on corals and coral reefs”, published in the September 2019 edition of the magazine Vogue Portugal
Distinctions

Other distinction

2015 Postdoctoral Fellowship
Fundação para a Ciência e a Tecnologia, Portugal
2015 Hans and Lotte Hass Marine Conservation Prize (“Hans und Lotte Hass Meeresschutzpreis”)
Haus des Meeres - Aqua Terra Zoo, Austria
2014 University of Queensland Travel Award for International Collaborative Research
University of Queensland, Australia
2013 EU Marie Curie IntraEuropean Fellowship
European Research Council, Belgium
2013 Infrastructure Access Fellowship
ASSEMBLE Plus - Association of European Marine Biological Laboratories, France
2011 Lise-Meitner postdoctoral fellowship
Fonds zur Förderung der wissenschaftlichen Forschung, Austria
2004 PhD fellowship
Fundação para a Ciência e a Tecnologia, Portugal