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Patricia Martins, born in 1985, graduated in Biology and MSc in Marine Biology at the University of Aveiro. In 2016 concluded her PhD in Biology (Specialization in Molecular Biology and Genetics) in the same institution. During her PhD she conducted research in the aquaculture field, focusing on the microbial communities inhabiting these systems, particularly metagenomics. At the end of 2018, and after 2 years of maternity leave, she started a post-doctoral fellowship in CESAM research unit (Centro de Estudos do Ambiente e do Mar, University of Aveiro). Since that, she has been responsible for managing the Marine Molecular Biology Laboratory located in CEPAM-ECOMARE at UA. Currently, she integrates the project "KleptoSlug - Kleptoplasty: The sea slug that got away with stolen chloroplasts" as a Researcher at UA. Keywords: Marine Biology, Molecular Biology, Microbial Communities, Metagenomics and Transcriptomics, Conservation of Marine Resources.
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Identification

Personal identification

Full name
Patrícia Tavares Martins

Citation names

  • Martins, Patrícia

Author identifiers

Ciência ID
B41A-0136-CBC0
ORCID iD
0000-0002-3815-7922
Researcher Id
W-8942-2019

Telephones

Telephone
  • 234401476 Ext.: 25606 (Professional)

Addresses

  • CESAM, Universidade de Aveiro. Campus Universitário de Santiago, 3810-193 A, Aveiro, Aveiro, Portugal (Professional)
  • Ecomare - Estrada do Porto de Pesca, GAFANHA DA, 3830-565, Ilhavo, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Biology
  • Natural sciences - Biological Sciences - Molecular Biology
  • Natural sciences - Earth and Environmental Sciences - Water Resources

Languages

Language Speaking Reading Writing Listening Peer-review
English Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
French Beginner (A1) Intermediate (B1) Beginner (A1) Beginner (A1)
Education
Degree Classification
2024/07/08 - 2024/07/11
Concluded
 Course on RNA-seq and ChIP-seq Data Analysis (Outros)
Universidade de Aveiro Departamento de Biologia, Portugal
2021/07/19 - 2021/07/23
Concluded
 Advanced Course on Data Analysis using R (Outros)
Universidade de Aveiro, Portugal
2021/07/12 - 2021/07/16
Concluded
 Advanced Course: Metabolomics as a tool in environmental research (Outros)
Universidade de Aveiro, Portugal
2011 - 2016
Concluded
 Biologia (Doutoramento)
Major in Biologia Molecular e Genética
Universidade de Aveiro, Portugal
"Caracterização molecular de comunidades microbianas na aquacultura" (THESIS/DISSERTATION)
 Aprovado por unanimidade
2013/07/15 - 2013/07/19
Concluded
 Microbial diversity: methods and applications (Curso de doutoramento (conclusão de unidades curriculares))
Universidade de Aveiro, Portugal
2013/07/11 - 2013/07/14
Concluded
 Scientific writing and Communication (Curso de doutoramento (conclusão de unidades curriculares))
Universidade de Aveiro, Portugal
2012/05/07 - 2012/05/11
Concluded
 Ecosystem services provided by wetlands: Anthropogenic impacts and Environmental chemistry (Curso de doutoramento (conclusão de unidades curriculares))
Universidade de Aveiro, Portugal
2011/04/28 - 2011/05/06
Concluded
 Experimental Design and Analysis of Multivariate Data using PRIMER and PERMANOVA (Curso de doutoramento (conclusão de unidades curriculares))
Universidade de Aveiro, Portugal
2011/02/28 - 2011/03/02
Concluded
 Workshop on Mapping Seabed Habitats: GIS Data Management (Outros)
Universidade de Aveiro, Portugal
2010
Concluded
 Biologia Marinha (Mestrado)
Universidade de Aveiro, Portugal
"Decomposição in situ de Phragmites australis: comunidades bacterianas" (THESIS/DISSERTATION)
 18 valores
2003 - 2008
Concluded
 Biologia (Licenciatura)
Universidade de Aveiro, Portugal
"Técnicas de Ecologia em Veado: um caso prático" (THESIS/DISSERTATION)
 15 valores
Affiliation

Science

Category
Host institution 		Employer
2022/05 - Current Contracted Researcher (Research) Universidade de Aveiro, Portugal
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
2021/04 - 2022/04 Contracted Researcher (Research) Universidade de Aveiro, Portugal
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
2020/12 - 2021/03 Research Trainee (Research) Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal

Others

Category
Host institution 		Employer
2018/12/01 - 2020 Postdoctoral Researcher Universidade de Aveiro, Portugal
2011/05/01 - 2016/02/01 Doutoramento Universidade de Aveiro, Portugal
2013 - 2015 Responsável Técnico Universidade de Aveiro, Portugal
Universidade de Aveiro, Portugal
2010/09/01 - 2010/12/01 Service provider in Biology. Main activities: Identification of biologic material, namely benthic macroinvertebrates. Toxicology experiments. Universidade de Aveiro, Portugal
2010/02/01 - 2010/07/01 Service provider in Biology. Main activities: Identification of biologic material, namely benthic macroinvertebrates. Microbial communities in decomposition leaves in Ria de Aveiro. Universidade de Aveiro, Portugal
2007/10/01 - 2008/05/31 Internship Câmara Municipal de Vale de Cambra, Portugal
Câmara Municipal de Vale de Cambra, Portugal
Projects

Contract

Designation Funders
2022/05 - Current Kleptoslug - Kleptoplasty: The sea slug that got away with stolen chloroplasts
ERC-2020-STG/949880
Researcher
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
 European Commission
Ongoing
2021/01/01 - 2025/12/31 Centre for Environmental and Marine Studies
LA/P/0094/2020
10.54499/LA/P/0094/2020
Universidade de Aveiro, Portugal

FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal

Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2021/04/15 - 2022/05 CtLight - Effects of light on the photobiology and growth of the commercially valuable macroalgae Codium tomentosum
PTDC/BIA-FBT/30979/2017
Researcher
Universidade de Aveiro, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2018/12/01 - 2020/11/30 SmartBioR - Valorização Inteligente de Recursos Biológicos Marinhos Endógenos
Centro-01-0145-FEDER-000018
Post-doc Fellow
Universidade de Aveiro, Portugal
Concluded
2019/01/01 - 2019/12/31 Centro de Estudos do Ambiente e do Mar
UID/AMB/50017/2019
Universidade de Aveiro, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded

Other

Designation Funders
2011/05 - 2014/12 AQUASAFE - Desenvolvimento de novas tecnologias para antecipar e diagnosticar surtos de doenças na aquicultura
PROMAR 31-03-05-FEP-0016
PhD Student Fellow
Universidade de Aveiro, Portugal
Concluded
Outputs

Publications

Conference poster
  1. Inês J. Castro; Luisa Magalhães; Martins, Patrícia; Ander Urrutia; Diaz, Seila. "BERBIGÃO DA RIA DE AVEIRO (PORTUGAL): UM ESTUDO SOBRE INFECÇÕES POR COCCÍDEOS". Trabalho apresentado em 2024.". Paper presented in Ciencia 2024, 2024.
  2. Joana Simões; MARTINS, PATRÍCIA; Simão Correia; Luisa Magalhães. "Assessing the Genetic Variability of Cerastoderma edule in Ria de Aveiro: Implications for Sustainable Management and Conservation". Paper presented in EUROLAG 10 - European Coastal Lagoon Symposium, 2023.
  3. Morelli, Luca; Martins, Patrícia; Paya, CE; Cassin, Elena; Cartaxana, P; Cruz, Sónia. Corresponding author: Morelli, Luca. "Functional algal chloroplasts in animal cells: the story of stolen functionalities". Paper presented in Meeting of Plant Molecular Biology (RBMP), 2022.
  4. Begoña Martinez-Lopez; Diana Lopes; Sónia Cruz; MARTINS, PATRÍCIA; Paulo Cartaxana. "Life cycle assessment of photosynthetic sea slug Elysia crispata". Paper presented in VIII International Symposium on Marine Sciences 2022 (ISMS), 2022.
  5. MARTINS, PATRÍCIA. "Macroinvertebrates communities associated with the decomposition process of Phragmites australis and Fucus vesiculosus in transiyional systems". Paper presented in 5th EUROLAG - European Coastal Lagoons Symposium, 2011.
  6. MARTINS, PATRÍCIA. "Microbial communities associated with the decomposition process of Phragmites australis in transitional systems.". Paper presented in 5th EUROLAG - European Coastal Lagoons Symposium, 2011.
  7. MARTINS, PATRÍCIA. "In situ decomposition study of Phragmites australis and Fucus vesiculosus along a salinity gradient". Paper presented in 4th European Conference on Coastal Lagoon Research (ECoCLR), 2009.
Journal article
  1. Morelli, Luca; Havurinne, Vesa; Madeira, Diana; Martins, Patrícia; Cartaxana, Paulo; Cruz, Sónia. "Photoprotective mechanisms in Elysia species hosting Acetabularia chloroplasts shed light on host-donor compatibility in photosynthetic sea slugs". Physiologia Plantarum 176 2 (2024): http://dx.doi.org/10.1111/ppl.14273.
    10.1111/ppl.14273
  2. Renato Mamede; Carla Patinha; Patrícia Martins; Eduardo Ferreira da Silva; Ricardo Calado; Fernando Ricardo. "Effects of H2O2 pretreatment on the elemental fingerprints of bivalve shells and their implications for the traceability of geographic origin". Heliyon (2024): http://dx.doi.org/10.1016/j.heliyon.2024.e25872.
    10.1016/j.heliyon.2024.e25872
  3. Lopes, Diana; Cruz, Sónia; Martins, Patrícia; Ferreira, Sónia; Nunes, Cláudia; Domingues, Pedro; Cartaxana, Paulo. "Sea Slug Mucus Production Is Supported by Photosynthesis of Stolen Chloroplasts". Biology 11 8 (2022): 1207. http://dx.doi.org/10.3390/biology11081207.
    10.3390/biology11081207
  4. Cartaxana, Paulo; Lopes, Diana; Martinez, Begoña; Martins, Patrícia; Cruz, Sónia. "Aposymbiotic Specimen of the Photosynthetic Sea Slug Elysia crispata". Diversity 14 5 (2022): 313. http://dx.doi.org/10.3390/d14050313.
    10.3390/d14050313
  5. Madeira, Diana; Fernandes, Joana Filipa; Jerónimo, Daniel; Martins, Patrícia; Ricardo, Fernando; Santos, Andreia; Domingues, Maria Rosário; Diniz, Mário Sousa; Calado, Ricardo. "Salinity shapes the stress responses and energy reserves of marine polychaetes exposed to warming: From molecular to functional phenotypes". Science of The Total Environment 795 (2021): 148634. http://dx.doi.org/10.1016/j.scitotenv.2021.148634.
    10.1016/j.scitotenv.2021.148634
  6. Martins, Patrícia; Bartilotti, Cátia; Calado, Ricardo. "The association of the non-indigenous spider crab Pyromaia tuberculata with the jellyfish Catostylus tagi as a potential spread mechanism in European waters". Marine Biodiversity 50 6 (2020): http://dx.doi.org/10.1007/s12526-020-01142-z.
    10.1007/s12526-020-01142-z
  7. Oliveira, Vanessa; Martins, Patrícia; Marques, Bruna; Cleary, Daniel F. R.; Lillebø, Ana I.; Calado, Ricardo. "Aquaponics using a fish farm effluent shifts bacterial communities profile in halophytes rhizosphere and endosphere". Scientific Reports 10 1 (2020): http://dx.doi.org/10.1038/s41598-020-66093-8.
    10.1038/s41598-020-66093-8
  8. Duarte, L.N.; Coelho, F.J.R.C.; Oliveira, V.; Cleary, D.F.R.; Martins, P.; Gomes, N.C.M.. "Characterization of bacterioplankton communities from a hatchery recirculating aquaculture system (RAS) for juvenile sole (Solea senegalensis) production". PLoS ONE 14 1 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85060551441&partnerID=MN8TOARS.
    10.1371/journal.pone.0211209
  9. Duarte, L.N.; Coelho, F.J.R.C.; Cleary, D.F.R.; Bonifácio, D.; Martins, P.; Gomes, N.C.M.. "Bacterial and microeukaryotic plankton communities in a semi-intensive aquaculture system of sea bass (Dicentrarchus labrax): A seasonal survey". Aquaculture 503 (2019): 59-69. http://www.scopus.com/inward/record.url?eid=2-s2.0-85059353375&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2018.12.066
  10. Boaventura, C.M.; Coelho, F.J.R.C.; Martins, P.T.; Pires, A.C.C.; Duarte, L.N.; Uetanabaro, A.P.T.; Cleary, D.F.R.; Gomes, N.C.M.. "Micro-eukaryotic plankton diversity in an intensive aquaculture system for production of Scophthalmus maximus and Solea senegalensis". Aquaculture 490 (2018): 321-328. http://www.scopus.com/inward/record.url?eid=2-s2.0-85042852177&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2018.02.033
  11. Martins, P.; Coelho, F.J.R.C.; Cleary, D.F.R.; Pires, A.C.C.; Marques, B.; Rodrigues, A.M.; Quintino, V.; Gomes, N.C.M.. "Seasonal patterns of bacterioplankton composition in a semi-intensive European seabass (Dicentrarchus labrax) aquaculture system". Aquaculture 490 (2018): 240-250. http://www.scopus.com/inward/record.url?eid=2-s2.0-85042716680&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2018.02.038
  12. Martins, P.; Navarro, R.V.V.; Coelho, F.J.R.C.; Gomes, N.C.M.. "Development of a molecular methodology for fast detection of Photobacterium damselae subspecies in water samples". Aquaculture 435 (2015): 137-142. http://www.scopus.com/inward/record.url?eid=2-s2.0-84908408809&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2014.09.028
  13. Lopes, M.L.; Martins, P.; Rodrigues, A.M.; Quintino, V.. "Macroinvertebrates communities associated with the decomposition of Phragmites australis and Fucus vesiculosus in transitional systems". Journal of Sea Research 83 (2013): 72-82. http://www.scopus.com/inward/record.url?eid=2-s2.0-84886301400&partnerID=MN8TOARS.
    10.1016/j.seares.2013.03.008
  14. Martins, P.; Cleary, D.F.R.; Pires, A.C.C.; Rodrigues, A.M.; Quintino, V.; Calado, R.; Gomes, N.C.M.. "Molecular analysis of bacterial communities and detection of potential pathogens in a recirculating aquaculture system for Scophthalmus maximus and Solea senegalensis". PLoS ONE 8 11 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84893458519&partnerID=MN8TOARS.
    10.1371/journal.pone.0080847
  15. Martins, P.; Lopes, M.L.; Rodrigues, A.M.; Gomes, N.C.M.; Quintino, V.. "Bacterial communities associated with the decomposition of Fucus vesiculosus in transitional waters". Estuarine, Coastal and Shelf Science 110 (2012): 116-124. http://www.scopus.com/inward/record.url?eid=2-s2.0-84865334934&partnerID=MN8TOARS.
    10.1016/j.ecss.2012.04.003
  16. Lopes, M.L.; Martins, P.; Ricardo, F.; Rodrigues, A.M.; Quintino, V.. "In situ experimental decomposition studies in estuaries: A comparison of Phragmites australis and Fucus vesiculosus". Estuarine, Coastal and Shelf Science 92 4 (2011): 573-580. http://www.scopus.com/inward/record.url?eid=2-s2.0-79955091253&partnerID=MN8TOARS.
    10.1016/j.ecss.2011.02.014
Online resource
  1. Madeira, Diana; Fernandes, Joana F.; Jerónimo, Daniel; Martins, Patrícia; Ricardo, Fernando; Santos, Andreia; Domingues, Maria Rosário; Diniz, Mário; Calado, Ricardo. Influence of temperature and salinity on the cellular stress response and energy reserves of Hediste diversicolor [Dataset].. 2021. http://doi.org/10.5281/zenodo.4601024.
    10.5281/zenodo.4601024
Preprint
  1. Martins, Patrícia; Pimentel, Tânia; Ribeiro, Nuno; Calado, Ricardo. Corresponding author: Calado, Ricardo. "Effect of Anesthesia in the Skin Mucus Microbiome of Atlantic Salmon (Salmo Salar)". 2024. http://dx.doi.org/10.2139/ssrn.4800165.
    10.2139/ssrn.4800165
Thesis / Dissertation
  1. MARTINS, PATRÍCIA. "Caracterização molecular de comunidades microbianas na aquacultura". PhD, Universidade de Aveiro, 2016.
  2. MARTINS, PATRÍCIA. "Estudo in situ da decomposição de Phragmites australis: comunidades bacterianas". Master, Universidade de Aveiro, 2009.

Other

Dataset
  1. Diana Madeira; Joana Filipa Fernandes; Daniel Jerónimo; Patrícia Martins; Fernando Ricardo; Andreia Santos; Maria Rosário Domingues; Mário Sousa Diniz; Ricardo Calado. Influence of temperature and salinity on the cellular stress response and energy reserves of Hediste diversicolor..
    10.5281/ZENODO.4601024
Other output
  1. Livro/brochura “A água e os resíduos”. Participação na realização do livro/brochura “A água e os resíduos” editado pela Câmara Municipal de Vale de Cambra e a RECOLTE, integrado numa campanha de educação ambiental que decorreu nas escolas EB1 do Concelho de Vale de Cambra.. 2008. MARTINS, PATRÍCIA.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2024/07 Coccidian infections in common cockles of Ria de Aveiro, Portugal IX International Symposium on marine sciences
Valencia (Spain)
2022/07/22 Analise transcriptómica e fotoaclimatação em Codium tomentosum Workshop final do projeto CtLight
ECOMARE - Universidade de Aveiro
2015/11/25 Desenvolvimento de técnicas moleculares para a deteção de Photobacterium damselae Mini-worshop Projecto Aquasafe.
Universidade de Aveiro (Aveiro, Portugal)
2015/11/25 Comunidades microbianas em sistemas de aquacultura intensiva Mini-worshop Projecto Aquasafe
(Aveiro, Portugal)
2013/11/22 Ferramentas moleculares para diagnóstico de doenças em aquacultura Workshop “Os nossos serviços ao seu serviço – Laboratório Central de Análises”.
Universidade de Aveiro (Aveiro, Portugal)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2022/10 - 2023/06 Genetic diversity of the cockle population (Cerastoderma edule) in the Ria de Aveiro
Co-supervisor
 Biologia (Degree)
Universidade de Aveiro, Portugal
2021 - 2023 Fotofisiologia de macroalgas potencialmente dadoras de cloroplastos à lesma marinha Elysia viridis e os seus cleptoplastos
Co-supervisor
 Biologia Aplicada (Master)
Universidade de Aveiro, Portugal
2021/09 - 2022/09 Optimization of culturing conditions for two Sacoglossa sea slug species, Elysia viridis and Elysia crispata
Co-supervisor of Begoña Martínez López
 Máster Cultivos Marinos (Master)
Universidad de Las Palmas de Gran Canaria, Spain

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2015/11/25 - Current Mini-Workshop Projeto AquaSafe - Desenvolvimento de novas tecnologias para antecipação de surtos e diagnóstico rápido de doenças em aquaculturas (2015/10/25)
Workshop (Member of the Organising Committee)
 Universidade de Aveiro, Portugal
2011/07/25 - 2011/07/30 5th EUROLAG - European Coastal Lagoon Symposium (2011/07/25 - 2011/07/30) (2011/07/25 - 2011/07/30)
Symposium (Member of the Organising Committee)
 Universidade de Aveiro, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2019/10/10 - 2019/10/12 Monitor científico no Fórum Internacional de Inovação e Tecnologia – TECHDAYS TECHDAYS
Câmara Municipal de Aveiro, Portugal

Association member

Society Organization name Role
2005 - 2006 Bionúcleo AAUAv – Núcleo de Biologia da Associação Académica da Universidade de Aveiro

Journal scientific committee

Journal title (ISSN) Publisher
2024 - Current Animal Microbiome
2023 - Current Current Microbiology
2019 - Current Aquaculture (0044-8486) Elsevier
2019 - Current Estuarine, Coastal and Shelf Science
2019 - Current Applied Microbiology and Biotechnology (1432-0614) Springer-Verlag
2018 - Current Scientific Reports (2045-2322) Springer Science and Business Media LLC
2021 - 2021 Food Control
2014 - 2016 PLoS ONE (1932-6203) Public Library of Science

Mentoring / Tutoring

Topic Student name
2012 - 2013 Acompanhamento na orientação do Mestrado da aluna Soraia Mascarenhas com o título de tese “Nova abordagem para deteção das subespécies de Photobacterium damselae” Soraia Mascarenhas
2011 - 2012 Acompanhamento na orientação do Mestrado do aluno Rafael Navarro com o título de tese “Patógenos bacterianos da aquacultura” Rafael Navarro