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Ana M Melo completed her PhD at IST (University of Lisbon, Portugal) in January 2014. Her PhD research was focused on the elucidation of the key factors that govern the formation of amyloid-like fibers of non-amyloidogenic proteins catalyzed by anionic lipid membranes. It resulted in 5 first author publications (BBA Biomembr, J. Phys. Chem. B, Soft Matter, Phys. Chem. Chem. Phys., and Methods Mol. Biol). After finishing her PhD, AM Melo immediately moved to Yale University (USA) to join Rhoades Lab, a world leader group in the application of smFRET for studying function/dysfunction of several intrinsically disordered amyloidogenic proteins. She worked as a postdoc under the supervision of Prof. Elizabeth Rhoades at 2 prestigious American Ivy League Universities (Yale and University of Pennsylvania -UPenn) (Feb 2014-Sept 2017). At Yale, she also worked in an ambitious collaborative project with Prof. Scott Holley to apply FCCS in live zebrafish embryos. In July 2015, she moved to UPenn with Prof. Rhoades. During this transition, she acquired experience in setting-up a new lab; specifically, in building home-made microscopes for smFRET measurements. In addition, she received a Postdoc Fellowship from the NSF Center for Engineering MechanoBiology (Jan-Sept 2017). Her work at Rhoades Lab was primarily focused on exploring the conformational plasticity of tau protein bound to soluble tubulin using smFRET, and its role in tau function/dysfunction. Overall her research work in Rhoades Lab resulted in 3 high impact factor publications: (i) first author in a PNAS paper (2016-recommended in F1000 Prime), (ii) first author in Methods in Cell Biology (2017), and finally (iii) co-author in a Dev. Cell paper (2015) from the collaboration with Holley Lab. She also mentored undergraduate students (at Yale and UPenn) and 3 first-year PhD rotation students at UPenn. Her work attained international recognition with several selected/invited presentations (including US Biophysical meetings (2016 and 2017) and a Gordon Research Seminar (2016) of Intrinsically Disordered Proteins. She was also awarded with a CPOW Travel Grant from BPS that recognizes promising Young Women in Biophysics and was co-chair of 2016 IDPs Platform section at BPS Meeting (Los Angeles). AM Melo returned to Portugal in Oct 2017 to pursue her scientific independence. Currently, AM Melo is a CEEC-individual researcher (Junior level). She is Head of the Bioimaging Facility at IST (member of PPBI and EuroBioimaging) and Invited Assistant Professor at the Dept. of Bioengineering at IST. The major goals of her team are: (i) the development of innovative single-molecule approaches to characterize the early-events of protein aggregation, and (ii) apply advanced fluorescence methods to study lipid membranes organization. AM Melo already obtained 3 Grants (2-ongoing) as Principal Investigator (PI) over the last 5-years (total ~ 318.2K Eur): 1. FCT Grant for huntingtin exon-1 (Huntington´s disease); 2. FCT Exploratory Grant for tau protein; 3. Maria de Sousa Award (by Bial Foundation/ PT Medical Association). She built the first smFRET microscope in Portugal. AM Melo is also Management Committee Member of the COST Action ML4NGP and co-leader of Working Group 4. She supervised 2 Postdocs and 8 Master Students (2-ongoing). Part of AM Melo work in Portugal has already been published: Front Mol Neurosci. (2020, corresponding author), Int. J. Mol. Sci. (2021, co-author), Langmuir (2021, co-corresponding author), Pharmaceutics (2022, co-author), Tissue Engineering Part C: Methods (2023, co-author), Int. J. Biol. Macromol (2024, co-author). She was also invited/selected for several Oral International Talks (e.g. Biophysics Meetings from US, Iberian and Brazil; and from International Society of Neurochemistry); and also at national presentations (e.g. invited 2021 PT Neuroscience Meeting).
Identification

Personal identification

Full name
Ana Margarida Pereira de Melo

Citation names

  • Ana M. Melo
  • Melo, A.M.
  • Melo, Ana M.

Author identifiers

Ciência ID
A614-4619-1CCF
ORCID iD
0000-0002-2086-5939
Researcher Id
Q-6580-2017

Email addresses

  • anammelo@tecnico.ulisboa.pt (Professional)

Telephones

Telephone
  • 218419219 (Professional)

Addresses

  • Instituto Superior Técnico, Institute for Bioengineering and Biosciences (iBB), Complexo Interdisciplinar, Av. Rovisco Pais, 1049-001 , Lisbon, Lisboa, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Biophysics
  • Natural sciences - Biological Sciences - Biochemistry

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
French Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Education
Degree Classification
2010/01/01 - 2014/01/16
Concluded
PhD Chemistry (Doutoramento)
Universidade de Lisboa Instituto Superior Técnico, Portugal
"Lipid-protein interaction in “Amyloid-like” fiber formation" (THESIS/DISSERTATION)
Pass with Distinction
2009/10/29
Concluded
Biochemistry (Mestrado)
Major in Medical Biochemistry
Universidade de Lisboa Faculdade de Ciências, Portugal
"The Role of Lipid Membranes on the Molecular Mechanism of Amyloid-like Fibril Formation" (THESIS/DISSERTATION)
18/20
2007/07/31
Concluded
Biochemistry (Licenciatura)
Universidade de Lisboa Faculdade de Ciências, Portugal
"N/A" (THESIS/DISSERTATION)
17/20
Affiliation

Teaching in Higher Education

Category
Host institution
Employer
2021/06/01 - Current Invited Assistant Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal

Others

Category
Host institution
Employer
2019/06/01 - Current Junior Researcher under the CEEC-Individual FCT call (Independent Support, 1st Edition) Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
2017/10/27 - 2019/05/31 Postdoctoral Researcher Fellow under the Portuguese Platform of BioImage (PPBI) Universidade de Lisboa Instituto Superior Técnico, Portugal
2015/07/01 - 2017/09/15 Postdoctoral Researcher Fellow (Rhoades Lab) University of Pennsylvania Department of Chemistry, United States
2014/02/01 - 2015/06/30 Postdoctoral Associate (Rhoades Lab) Yale University Department of Molecular Biophysics and Biochemistry, United States
2010/01/01 - 2014/01/16 PhD Student Universidade de Lisboa Instituto Superior Técnico, Portugal
2008/09/01 - 2009/09/30 Master Student Training Universidade de Lisboa Instituto Superior Técnico, Portugal
Projects

Grant

Designation Funders
2023/01/01 - 2024/12/31 Tracking the unconventionally secreted tau species: insights into the progression of tauopathies
45/2022
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
BIAL Foundation and Portuguese Medical Association
Ongoing
2023/03/01 - 2024/08/31 The role of the plasma membrane in the unconventional secretion of tau: insights into the progression of tauopathies
2022.01454.PTDC
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2018/10/01 - 2022/09/30 The aggregation-prone structures of Huntingtin exon 1 at the single-molecule level: Influence of membranes and implications in Huntington disease
PTDC/BIA-BFS/30959/2017
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2016/07/15 - 2017/09 Molecular mechanisms and cellular implications of tau dysfunction
info:eu-repo/grantAgreement/NIH/NATIONAL INSTITUTE ON AGING/3RF1AG053951-01S1/US
Researcher
University of Pennsylvania School of Arts and Sciences, United States
National Institutes of Health
Concluded
2013/06/01 - 2016/11/30 MULTIFUNCTIONAL NANOMATERIALS FOR FLUORESCENCE IMAGING AND SENSING
RECI/CTM-POL/0342/2012
Researcher
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2013/07/01 - 2015/12/31 Modulation of Calcitonin Amyloid Formation by Lipid Membranes and Extracellular Matrix: Implications for the Mechanism of Cytotoxicity of Amyloidogenic Polypeptides
PTDC/BBB-BQB/2661/2012
Researcher
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/01/01 - 2013/06/30 Amyloidogenic proteins: role of lipid-protein interaction in amyloid-like fibril formation
PTDC/QUI-BIQ/099947/2008
Researcher
Universidade de Lisboa Instituto Superior Técnico, Portugal
Fundação para a Ciência e a Tecnologia
Concluded

Contract

Designation Funders
2019/06/01 - 2025/05/31 Single-molecule characterization of membrane-binding of Huntingtin protein: implications in Huntington Disease
CEECIND/00884/2017
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2017/01 - 2017/09 The role of tau point-mutations in function (tau-tubulin complex)
CMMI-1548571
Post-doc Fellow
University of Pennsylvania, United States
NSF Center for Engineering MechanoBiology (CEMB)
Concluded

Other

Designation Funders
2022/10 - 2026/10 Non-globular proteins in the era of Machine Learning (ML4NGP)
CA21160
Management Committee Member of the COST Action ML4NGP and co-leader of Working Group 4
European Cooperation in Science and Technology
Ongoing
2020/02 - 2021/09 The Portuguese Platform of Bioimage, Head of the Advanced Fluorescence Microscopy Facility at iBB
POCI-01-0145-FEDER-022122
Fundação para a Ciência e a Tecnologia
Outputs

Publications

Conference abstract
  1. Sousa, T.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "The conformational dynamics of the flanking polyQ regions in the membrane-bound state of huntingtin exon 1". Paper presented in Biophysical Society 66th Annual Meeting, Biophys. J., San Francisco, 2022.
    Published
  2. Sousa, T.; Damas, G.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "The flanking polyQ regions of Huntingtin exon 1 display distinct dynamic signatures in its membrane-bound state: insights into Huntington´s disease". Paper presented in FEBS Open Bio, Lisbon, 2022.
    Published
  3. Sousa, T.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "Effects of the flanking polyq regions and membrane physical properties on huntingtin binding to lipid vesicles". Paper presented in Biophysical Society 65th Annual Meeting, Biophys. J., 2021.
    Published
  4. Ricardo J.C.; Scanavachi, G.; Fernandes, F.; Melo, A.M.; Itri, R.; Coutinho, A.; Prieto, M.. "Membrane remodeling by the amyloidogenic peptide IAPP: surface crowding relevance". Paper presented in Joint 12th EBSA / 10th ICBP-IUPAP Biophysics Congress, Eur. Biophys. J., Madrid, 2019.
    Published
  5. Melo, A.M.; Rhoades, E.. "Exploring the functional and structural impact of disease-associated mutants of tau". Paper presented in Biophysical Society 61st Annual Meeting, Biophys. J., New Orleans, 2017.
    Published
  6. Melo, A.M.; Coraor, J.; Alpha-Cobb G.; Elbaum-Garfinkle, S.; Rhoades, E.. "Exploring the conformational plasticity of tau: insights into function and dysfunction". Paper presented in 11th European Biophysics Congress, Eur. Biophys. J., Edinburgh, 2017.
    Published
  7. Melo, A.M.; Cobb, G.; Coraor, J.; Elbaum-Garfinkle, S.; Rhoades, E.. "Determining a topological model for tau bound to tubulin heterodimers". Paper presented in Biophysical Society 60th Annual Meeting, Biophys. J., Los Angeles, 2016.
    Published
  8. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Oligomer stoichiometry of membrane-bound proteins involved in a cooperative partition equilibrium: a Homo-FRET study". Paper presented in Biophysical Society 59th Annual Meeting, Biophys. J., Baltimore, 2015.
    Published • 10.1603/ice.2016.115877
  9. Coraor, J.; Melo, A.M.; Cobb, G.; Rhoades, E.. "A comparison of the conformational changes of tau isoforms in the tau-tubulin complex". Paper presented in Biophysical Society 59th Annual Meeting, Biophys. J., Baltimore, 2015.
    Published
  10. Melo, A.M.; Cobb, G.; Coraor, J.; Elbaum-Garfinkle, S.; Rhoades, E.. "Single-molecule FRET reveals an extended structure of tau bound to tubulin heterodimers". Paper presented in Biophysical Society 59th Annual Meeting, Biophys. J., Baltimore, 2015.
    Published
  11. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Tracking membrane-driven protein oligomerization using fluorescence lifetime and homo-FRET studies". Paper presented in 9th European Biophysics Congress, Eur. Biophys. J., Lisbon, 2013.
    Published
  12. Melo, A.M.; Loura, L.M.S.; Villalaín, J.; Fernandes, F.; Prieto, M.; Coutinho, A.. "Biophysical features of electrostatically-driven lipid-protein fibers". Paper presented in 9th European Biophysics Congress, Eur. Biophys. J., Lisbon, 2013.
    Published
  13. Melo, A.M.; Loura, L.M.S.; Villalaín, J.; Fernandes, F.; Prieto, M.; Coutinho, A.. "Non-amyloidogenic lipid-protein fibers display a multilamellar structure: implications on lipid/protein dynamics and membrane surface dehydration". Paper presented in 27th Annual Symposium of the Protein Society, Protein Sci., Boston, 2013.
    Published
  14. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Exploring fluorescence lifetime and homo- FRET measurements to monitor lysozyme oligomerization in anionic lipid membranes: relation to “amyloid-like” fibril formation". Paper presented in Biophysical Society 56th Annual Meeting, Biophys. J., San Diego, 2012.
    Published
  15. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A. "Amyloid-like” fibril formation driven by anionic lipid membranes: multiparametric fluorescence detection of lysozyme oligomeric intermediates". Paper presented in 22nd IUBMB & 37th FEBS Congress, FEBS J., Sevilla, 2012.
    Published
  16. Melo, A.M.; Prieto, M.; Coutinho, A.. "Quantifying protein binding to lipid vesicles using Fluorescence Correlation Spectroscopy (FCS)". Paper presented in Biophysical Society 55th Annual Meeting, Biophys. J., Baltimore, 2011.
    Published
  17. Melo, A.M.; Prieto, M.; Coutinho, A.. "Lipid-protein interaction and amyloid-like fiber formation: FLIM and FCS studies". Paper presented in 8th European Biophysics Congress, Eur. Biophys. J., Budapest, 2011.
    Published
  18. Coutinho, A.; Melo, A.M.; Loura, L.M.S.; Prieto, M.. "Influence of protein surface coverage on lysozyme interaction with anionic lipid vesicles". Paper presented in 7th European Biophysics Congress, Eur. Biophys. J., Genoa, 2009.
    Published
  19. Melo, A.M.; Coutinho, A.; Prieto, M.. "Fluorescence correlation spectroscopy studies of lysozyme partition to phospholipid vesicles". Paper presented in 7th European Biophysics Congress, Eur. Biophys. J., Genoa, 2009.
    Published
Conference poster
  1. Sousa, T.; Damas, G.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "The flanking polyQ regions of Huntingtin exon 1 display distinct dynamic signatures in its membrane-bound state: insights into Huntington´s disease". Paper presented in 25th IUBMB Congress, the 46th FEBS Congress and the 15th PABMB Congress, 2022.
  2. ” Sousa, T.; Damas, G.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "The flanking polyQ regions of Huntingtin exon 1 display distinct conformational signatures in its membrane­bound state: insights into Huntington´s disease". Paper presented in Gordon Research Conference (GRC) in Intrinsically Disordered Proteins, 2022.
  3. Sousa, T.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "The conformational dynamics of the flanking polyQ regions in the membrane-bound state of huntingtin exon 1". Paper presented in 20th International Union for Pure and Applied Biophysics (IUPAB), 2021.
  4. Sousa, T.; Bernardes, N.; Coutinho, A.; Prieto, M.; Melo, A.M.. "Effects of the flanking polyQ regions and membrane physical properties on huntingtin binding to lipid vesicles". Paper presented in Biophysical Society 65th Annual Meeting, 2021.
  5. Scanavachi, G.; Melo, A.M.; Coutinho, A.; Fedorov, A.; Prieto, M.; Itri, R.. "The impact of oxidized POPC derivatives on lipid bilayer hydration and fluidity: insights from steady-state and time-resolved fluorescence methodologies". Paper presented in Biophysical Society Thematic Meeting: Revisiting the Central Dogma of Molecular Biology at the Single-Molecule Level, 2019.
  6. Melo, A.M.; Coraor, J.; Alpha-Cobb, G.; Elbaum-Garfinkle, S.; Rhoades, E.. "Exploring the conformational plasticity of tau: insights into function and dysfunction". Paper presented in 11th European Biophysics Congress, 2017.
  7. Melo, A.M.; Coutinho, A.; Loura, L.; Fernandes, F.; Prieto, M.. "Amyloid-like fibers and the role of lipids: multibilayer structure and protein oligomerization from FLIM-FRET and homo-FRET methodologies". Paper presented in FRET 2 International Discussion Meeting, 2016.
  8. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Oligomer stoichiometry of membrane-bound proteins involved in a cooperative partition equilibrium: a Homo-FRET study". Paper presented in Biophysical Society 59th Annual Meeting, 2015.
  9. Coraor, J.; Melo, A.M.; Cobb, G.; Rhoades, E.. "A comparison of the conformational changes of tau isoforms in the tau-tubulin complex". Paper presented in Biophysical Society 59th Annual Meeting, 2015.
  10. Melo, A.M.; Cobb, G.; Coraor, J.; Elbaum-Garfinkle, S.; Rhoades, E.. "Single-molecule FRET reveals an extended structure of tau bound to tubulin heterodimers". Paper presented in Biophysical Society 59th Annual Meeting, 2015.
    10.1364/fio.2005.fwk6
  11. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "A Homo-FRET-based method for quantifying the oligomer stoichiometry of membrane-bound proteins involved in a cooperative partition equilibrium”". Paper presented in XIVth Congress of the Spanish Biophysical Society, 2014.
  12. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Tracking membrane-driven protein oligomerization using fluorescence lifetime and homo- FRET studies". Paper presented in 9th European Biophysics Congress, 2013.
  13. Melo, A.M.; Loura, L.M.S.; Villalaín, J.; Fernandes, F.; Prieto, M.; Coutinho, A.. "Biophysical features of electrostatically-driven lipid-protein fibers". Paper presented in 9th European Biophysics Congress, Lisbon, 2013.
  14. Melo, A.M.; Loura, L.M.S.; Villalaín, J.; Fernandes, F.; Prieto, M.; Coutinho, A.. "Non-amyloidogenic lipid-protein fibers display a multilamellar structure: implications on lipid/protein dynamics and membrane surface dehydration". Paper presented in 27th Annual Symposium of the Protein Society, 2013.
  15. Melo, A.M.; Fedorov, A.; Prieto, M.; Coutinho, A.. "Amyloid-like fibril formation driven by anionic lipid membranes: multiparametric fluorescence detection of lysozyme oligomeric intermediates". Paper presented in 22nd IUBMB & 37th FEBS Congress, 2012.
  16. Melo, A.M.; Coutinho, A.; Prieto, M.. "Quantifying protein binding to lipid vesicles using fluorescence correlation spectroscopy (FCS)". Paper presented in Biophysical Society 55th Annual Meeting (USA), 2011.
  17. Melo, A.M.; Prieto, M.; Coutinho, A.. "Lipid-protein interaction and amyloid-like fiber formation: FLIM and FCS studies". Paper presented in 8th European Biophysics Congress, 2011.
  18. Coutinho, A.; Melo, A.M.; Prieto, M.. "Lipid-protein interaction: quantifying protein binding to lipid vesicles using single colour fluorescence correlation spectroscopy (FCS)". Paper presented in IV Spanish Portuguese Biophysical Congress, 2010.
  19. Coutinho, A.; Melo, A.M.; Loura, L.M.S.; Prieto, M.. "Influence of protein surface coverage on lysozyme interaction with anionic lipid vesicles". Paper presented in 7th European Biophysics Congress, 2009.
  20. Melo, A.M.; Coutinho, A.; Prieto, M.. "Fluorescence correlation spectroscopy studies of lysozyme partition to phospholipid vesicles". Paper presented in 7th European Biophysics Congress, 2009.
Journal article
  1. Lopes-Nunes, Jéssica; Simões, Pedro; Moreira, David; Leandro, Kevin; Nobre, Rui Jorge; Pereira de Almeida, Luís; Campello, Maria Paula Cabral; et al. "RNA-based liposomes for oral cancer: From biophysical characterization to biological evaluation". International Journal of Biological Macromolecules 259 (2024): 129157. http://dx.doi.org/10.1016/j.ijbiomac.2023.129157.
    10.1016/j.ijbiomac.2023.129157
  2. Cartaxo, Ana Luísa; Fernandes, Ana; Rodrigues, Carlos; Melo, Ana M.; Tecklenburg, Katja; Margreiter, Eva; Day, Richard M; da Silva, Cláudia L; Cabral, Joaquim M S. "Developing a cell-microcarrier tissue engineered product for muscle repair using a bioreactor system". Tissue Engineering Part C: Methods (2023): http://dx.doi.org/10.1089/ten.tec.2023.0122.
    10.1089/ten.tec.2023.0122
  3. Miranda, André; Lopez-Blanco, Roi; Lopes-Nunes, Jessica; Melo, Ana M.; Campello, Maria P. C. ; Paulo, Antonio; Oliveira, Maria C. ; Mergny, Jean-Louis; Oliveira, Paula A. ; Fernandez-Megia, Eduardo; Cruz, Carla. "Gallic Acid-Triethylene Glycol Aptadendrimers Synthesis, Biophysical Characterization and Cellular Evaluation". Pharmaceutics 14 11 (2022): 2456. http://dx.doi.org/10.3390/pharmaceutics14112456.
    10.3390/pharmaceutics14112456
  4. Scanavachi, Gustavo; Coutinho, Ana; Fedorov, Alexander Andreevich; Prieto, Manuel; Melo, Ana M.; Itri, Rosangela. Corresponding author: Melo, Ana M.. "Lipid Hydroperoxide Compromises the Membrane Structure Organization and Softens Bending Rigidity". Langmuir 37 33 (2021): 9952-9963. http://dx.doi.org/10.1021/acs.langmuir.1c00830 (co-Corresponding author).
    Published • 10.1021/acs.langmuir.1c00830
  5. Eftimov, Petar; Yokoi, Norihiko; Melo, Ana M.; Daull, Philippe; Georgiev, Georgi As.. "Interactions of Meibum and Tears with Mucomimetic Polymers: A Hint towards the Interplay between the Layers of the Tear Film". International Journal of Molecular Sciences 22 5 (2021): 2747. http://dx.doi.org/10.3390/ijms22052747.
    Published • 10.3390/ijms22052747
  6. Birol, Melissa; Melo, Ana M.. Corresponding author: Melo, Ana M.. "Untangling the Conformational Polymorphism of Disordered Proteins Associated With Neurodegeneration at the Single-Molecule Level". Frontiers in Molecular Neuroscience 12 (2020): http://dx.doi.org/10.3389/fnmol.2019.00309 (Corresponding author).
    Published • 10.3389/fnmol.2019.00309
  7. Melo, Ana M.; Elbaum-Garfinkle, Shana; Rhoades, Elizabeth. "Insights into tau function and dysfunction through single-molecule fluorescence". Methods in Tau Cell Biology (2017): 27-44. http://dx.doi.org/10.1016/bs.mcb.2017.06.010.
    Published • 10.1016/bs.mcb.2017.06.010
  8. Melo, Ana M.; Coraor, Juliana; Alpha-Cobb, Garrett; Elbaum-Garfinkle, Shana; Nath, Abhinav; Rhoades, Elizabeth. "A functional role for intrinsic disorder in the tau-tubulin complex". Proceedings of the National Academy of Sciences 113 50 (2016): 14336-14341. http://dx.doi.org/10.1073/pnas.1610137113, (Recommended in F1000 Prime).
    Published • 10.1073/pnas.1610137113
  9. Jülich, Dörthe; Cobb, Garrett; Melo, Ana M.; McMillen, Patrick; Lawton, Andrew K.; Mochrie, Simon G.J.; Rhoades, Elizabeth; Holley, Scott A.. "Cross-Scale Integrin Regulation Organizes ECM and Tissue Topology". Developmental Cell 34 1 (2015): 33-44. http://dx.doi.org/10.1016/j.devcel.2015.05.005.
    Published • 10.1016/j.devcel.2015.05.005
  10. Melo, Ana M.; Fedorov, Aleksander; Prieto, Manuel; Coutinho, Ana. "Exploring homo-FRET to quantify the oligomer stoichiometry of membrane-bound proteins involved in a cooperative partition equilibrium". Phys. Chem. Chem. Phys. 16 34 (2014): 18105-18117. http://dx.doi.org/10.1039/c4cp00060a.
    Published • 10.1039/c4cp00060a
  11. Melo, Ana M.; Loura, Luís M. S.; Fernandes, Fábio; Villalaín, José; Prieto, Manuel; Coutinho, Ana. "Electrostatically driven lipid–lysozyme mixed fibers display a multilamellar structure without amyloid features". Soft Matter 10 6 (2014): 840-850. http://dx.doi.org/10.1039/c3sm52586d.
    Published • 10.1039/c3sm52586d
  12. Ana M. Melo; Prieto, Manuel; Coutinho, Ana. "Quantifying Lipid-Protein Interaction by Fluorescence Correlation Spectroscopy (FCS)". Methods in Molecular Biology 1076 (2014): 575-595.
    Published • 10.1007/978-1-62703-649-8_26
  13. Melo, Ana M.; Ricardo, Joana C.; Fedorov, Aleksander; Prieto, Manuel; Coutinho, Ana. "Fluorescence Detection of Lipid-Induced Oligomeric Intermediates Involved in Lysozyme “Amyloid-Like” Fiber Formation Driven by Anionic Membranes". The Journal of Physical Chemistry B 117 10 (2013): 2906-2917. http://dx.doi.org/10.1021/jp310396v.
    Published • 10.1021/jp310396v
  14. Melo, Ana M.; Prieto, Manuel; Coutinho, Ana. "The effect of variable liposome brightness on quantifying lipid–protein interactions using fluorescence correlation spectroscopy". Biochimica et Biophysica Acta (BBA) - Biomembranes 1808 10 (2011): 2559-2568. http://dx.doi.org/10.1016/j.bbamem.2011.06.001.
    Published • 10.1016/j.bbamem.2011.06.001
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023 Mapping the structural transitions of the flanking polyQ regions in huntingtin exon 1 upon membrane binding 1st ML4NGP meeting on machine learning and non-globular proteins (COST Action CA21160 Meeting)
(Bratislava, Slovakia)
2023 Probing the conformational dynamics of disordered proteins involved in neurodegeneration by advance fluorescence methods ELIXIR IDP Community F2F/hybrid meeting
(Bratislava, Slovakia)
2023 Untangling the distinct conformational signatures of the flanking polyQ regions in huntingtin exon 1 at the membrane surface International Society of Neurochemistry (ISN) and the European Society of Neurochemistry (ESN) Meeting
(Porto, Portugal)
2023 Untangling the distinct conformational signatures of the flanking polyQ regions in huntingtin exon 1 at the membrane surface: insights into Huntington´s disease 47th Annual Meeting of the Brazilian Biophysical Society
(Campinas, Brazil)
2022 The conformational dynamics of the flanking polyQ regions in the membrane-bound state of huntingtin exon 1 Biophysical Society 66th Annual Meeting
(San Francisco, United States)
2022 Untangling the role of disordered proteins in neurodegeneration at the single-molecule level (Invited) Workshop Neurodegenerative diseases RedeSAÚDE ULisboa
(Lisbon, Portugal)
2022 Förster Resonance Energy Transfer - FRET, Fluorescence Lifetime Imaging - FLIM and Single-molecule methods (Invited) 13th Course on Optical Microscopy Imaging for Biosciences
(Porto)
2021 HUNTINGTIN EXON 1 BINDING TO LIPID VESICLES: the role of membrane physical properties and the flanking polyQ regions (Invited) XVII Meeting of the Portuguese Society for Neuroscience
(Coimbra, Portugal)
2019 Membrane remodeling by the amyloidogenic peptide IAPP: surface crowding relevance Joint 12th EBSA / 10th ICBP-IUPAP Biophysics Congress
(Madrid, Spain)
2019 Untangling the conformational plasticity of tau through single-molecule FRET Strategies and tools for modulating pathologic protein self-assembly
(Porto, Portugal)
2019 Exploring the conformational plasticity of tau at the single-molecule level Integrative Approaches to Protein Folding & Aggregation
(Lisbon, Portugal)
2019 Untangling the role of disordered proteins in neurodegeneration at the single-molecule level (Invited)
Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen (Netherlands)
2018 Exploring the conformational plasticity of tau by single-molecule FRET: Insights into its biological function and dysfunction Chemistry at ULisboa (3ECQUL)
(Lisbon, Portugal)
2018 Determining a topological model for tau bound to tubulin heterodimers by smFRET: Insights into its function/dysfunction VIth Jornadas Ibéricas de Fotoquímica (6'JIF)
(Aveiro, Portugal)
2018 Exploring the conformational plasticity of tau-tubulin complex by single-molecule FRET: insights into function of a dysfunctional protein (Invited) 6th Iberian / 10th Iberoamerican Biophysics Congress
(Castellón, Spain)
2017 Proteins on membrane interfaces: Structure and dynamics of lipid-protein fibers from advanced FRET methodologies and microscopy VII Iberian Meeting on Colloids and Interfaces (RICI-VII)
(Madrid, Spain)
2017 Exploring the functional and structural impact of disease-associated mutants of tau Biophysical Society 61st Annual Meeting,
(New Orleans, United States)
2016 Conformational plasticity in the tau-tubulin complex: A functional role for intrinsic disorder (Invited)
i3S - Instituto de Investigação e Inovação, University of Porto (Porto, Portugal)
2016 Determining a topological model for tau bound to tubulin heterodimers Biophysical Society 60th Annual Meeting
(Los Angeles, United States)
2016 Exploring the conformational plasticity of tau: insights into function and dysfunction Gordon Research Seminar (GRS) in Intrinsically Disordered Proteins
(Les Diablerets, Switzerland)
2015 Lipid-protein supramolecular complexes: structure and dynamics of “amyloid- like” fibers WE-Heraeus Seminar: Avanced microscopy of membrane biophysics
(Bad Honnef, Germany)
2015 Quantifying the membrane assembly of amphitropic proteins by homo-FRET analysis Biophysics of proteins and surfaces: Assembly, Activation, Signaling
(Madrid, Spain)
2015 Amyloid-like fibers and the role of lipids: Structure and dynamics from advanced FRET methodologies and microscopy Latin American Crosstalk in Biophysics
(Salto, Uruguay)
2014 Structure and dynamics of amyloid-like protein fibers: FCS, FRET, FLIM, and FRAP XIV Iberian Peptide Meeting
(Bilbao, Spain)
2013 Structure and dynamics of “amyloid-like” lipid-protein fibers: FCS, FRET, FLIM and FRAP study 45th American Chemical Society National Meeting
(New Orleans, United States)
2013 Amyloid-like fibers formed upon interaction of proteins and anionic lipids: Structure and dynamics from advanced FRET methodologies and microscopy The Iberian Membrane Biophysics Colloquium
(San Sebastian, Spain)
2013 Lipid-protein interactions in "amyloid-like" fiber formation
European Molecular Biology Laboratory (EMBL) (Heidelberg, Germany)
2013 Lipid-protein interactions in "amyloid-like" fiber formation
Yale University (New Haven, United States)
2012 Coupled lysozyme partition/oligomerization triggered by anionic lipid vesicles: a time-resolved fluorescence study XIII Iberian Peptide Meeting
(Alicante, Spain)
2012 Exploring fluorescence lifetime and homo-FRET measurements to monitor lysozyme oligomerization in anionic lipid membranes: relation to “amyloid-like” fibril formation Biophysical Society 56th Annual Meeting
(San Diego, United States)
2012 Fluorescence and microscopy in membrane biophysics: rafts, ceramide and amyloids in lipidprotein interaction XV International Symposium on Luminescence Spectrometry
(Barcelona, Spain)
2012 Amyloid-like fiber formation driven by lipid-protein interaction: Structure and dynamics from homo-FRET, FLIM and FCS Lipid- Protein Interactions in Membranes: Implications for Health and Disease
(Hyderabad, India)
2011 Advanced FRET methodologies in membrane biophysics 3th Iberian Photochemistry Meeting
(Granada, Spain)
2011 Gel and fluid membrane domains in interaction with proteins: membrane morphological alterations and amyloid-like fiber formation XI Congress of the Spanish Biophysical Society
(Murcia, Spain)
2010 Amyloid-like fibers formation: the role of lipid-protein interaction 4th ISN Special Neurochemistry Conference
(Sicily, Italy)
2010 Lipid-protein interaction related to amyloid-like fibril formation International Courses on Toxicology
(Coimbra, Portugal)
2010 Lipid-protein interaction: Quantification of protein binding to lipid vesicles using single colour fluorescence correlation spectroscopy (FCS) International Courses on Toxicology 2010
(Coimbra, Portugal)
2010 Lysozyme binding to phosphatidylserine-containing membranes: implications in amyloid-like fiber formation XII Iberian Peptide Meeting
(Lisbon, Portugal)
2010 FCS: Formalisms and methodologies in lipid-protein interaction studies 10th Portuguese National Meeting on Photochemistry
(Porto, Portugal)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2024/02 - Current Joana Paixão; Studying the membrane binding and the unconventional secretion of tau protein: insights into the progression of Tauopathies
Supervisor
Biological Engineering (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2023/03 - Current Catarina Pimenta; The role of pathological modifications to tau protein on its membrane binding: insights into Tauopathies and Alzheimer´s disease
Supervisor
Biological Engineering (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2023/03 - 2023/12 Carlota de Galrinho e Silva; The effect of lipid membranes in tau aggregation
Supervisor
Pharmaceutical Engineering (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2021/09 - 2023/07 Gonçalo Damas; The role of the flanking polyQ regions of huntingtin exon 1 on lipid binding: Insights into Huntingto´s disease
Supervisor
Biotechnology (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/10 - 2023/02 Vanessa Ramos; Estudo da Interação do Exão-1 da Huntingtina com Membranas Lipídicas
Supervisor
Biochemistry (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
2021/09 - 2022/11 Daniela Muntean; Influence of lipid membranes on huntingtin exon 1 fibrillation
Supervisor
Biotechnology (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2021/11 - 2022/03 Cláudia Alves - Postdoctoral Scientist
Supervisor
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/09 - 2021/11 Adriana Inácio; A SUMO-Fusion Strategy for studying the aggregation kinetics of mutant Huntingtin Exon 1
Supervisor
Biotechnology (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019/04 - 2021/05 Tânia Sousa - Postdoctoral Scientist
Supervisor
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018/09 - 2019/11 Andreia Pereira; Expression and purification of recombinant Huntingtin exon 1 using solubilizing fusion tags
Supervisor
Biotechnology (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Event organisation

Event name
Type of event (Role)
Institution / Organization
2022/02/19 - 2022/02/23 Co-Chair of the Platform section: Intrinsically Disordered Proteins (IDP), Biophysical Society 66th Annual Meeting, San Francisco, USA (2022)
Congress
Biophysical Society, United States
2019 - 2019 Organizing committee of the 2019 Open day of Microscopy at the Instituto Superior Técnico (2019) PPBI - Portuguese Platform of BioImaging, Portugal
2018 - 2018 Organizer and Chair of Lisbon Biophysics Networking Meeting: From Protein Dynamics to Membrane Biophysics, Lisbon, Portugal (sponsor by American Biophysical Society) (2018)
Symposium
Biophysical Society, United States
2016 - 2016 Co-Chair of the Platform section: Intrinsically Disordered Proteins (IDP) and Aggregates I, Biophysical Society 60th Annual Meeting, Los Angeles, USA (2016)
Congress
Biophysical Society, United States
2010 - 2010 XII Iberian Peptide Meeting, Lisbon, Portugal (2010)
Congress (Member of the Organising Committee)

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2022/07/18 Unraveling structural dynamics of Tir-Host interactions blocking immune response
(Thesis) Arguer
Marta Filipa Mota Vieira (PhD)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2022/03/18 Biophysical analysis of Alzheimer's Amyloid-ß peptide assembly and clearance pathways
(Thesis) Main arguer
José Pedro Santos Leite (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2021/01/14 Investigating enzymatically controlled substrate delivery for nanopore protein sequencing
(Thesis) Main arguer
Hélder David Bandarra Tavares (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Association member

Society Organization name Role
2013 - Current Protein Society (US) Member
2011 - Current Biophysical Society, United States Member

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2021/03 - Current Biomolecular Engineering, Teaching Protein Structure and Folding / Protein Engineering, Responsible for 40% of all Theoretical and Practical Classes Master in Bioengineering and Nanosystems (MBioNano); Master in Biotechnology; Biological Engineering; Biomedical Engineering (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 - Current Structural Biology (Teaching an invited seminar of single-molecule techniques each academic year) Master Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/04 - 2020/04 Biomolecular Engineering (Teaching an invited seminar of single-molecule techniques) Master Universidade de Lisboa Instituto Superior Técnico, Portugal
2019/12/18 - 2019/12/18 Molecular Biotechnology (Teaching an invited seminar about neurodegenerative diseases) Master (Biotechnology) Universidade de Lisboa Instituto Superior Técnico, Portugal
2019/12/12 - 2019/12/12 Genetic Engineering ( Teaching an invited seminar about neurodegenerative diseases) (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2019/01/09 - 2019/01/09 Pharmaceutical Biophysics (Teaching an invited seminar of single-molecule techniques) FCT PhD program of Medicines and Pharmaceutical Innovation (i3DU) (Doutoramento) Universidade de Lisboa Faculdade de Farmácia, Portugal
2017 - 2019 Complements of Analytical Biochemistry (Teaching an invited seminar of single-molecule techniques each academic year) Licenciatura Universidade de Lisboa Faculdade de Ciências, Portugal
2017 - 2017 Biochemistry of Neurodegeneration (Teaching an invited seminar of single-molecule techniques) Master (Biochemistry) Universidade de Lisboa Faculdade de Ciências, Portugal

Evaluation committee

Activity description
Role
Institution / Organization Funding entity
2023/01 - 2023/02 Evaluation of research proposals
Evaluator
Dutch Research Council, Netherlands Dutch Research Council

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2022/11 Cinco jovens cientistas distinguidos com o Prémio Maria de Sousa Publico
2016 Penn Chemists Uncover New Information About a Protein Linked to Alzheimer’s PennToday

Interview (tv / radio show)

Program Topic
2022/11 - 2022/11 RTP Notícias Prémio Maria de Sousa. Valor de 150 mil euros para cinco jovens cientistas

Mentoring / Tutoring

Topic Student name
2019/07 - 2019/09 Expression and purification of recombinant Huntingtin exon 1 using a SUMO-tag Miguel Ferreira, Undergraduate student at FCUL, ULisboa
2019/02 - 2019/07 Expression and purification of recombinant Huntingtin exon 1 using an intein-tag Rafaela Cruz, Undergraduate student at FCUL, ULisboa
2018/02 - 2018/07 Studying the interaction of Calcitonin with heparin and lipid membranes Miguel Mira, Undergraduate student at FCUL, ULisboa
2017/05 - 2017/07 Understading binding between tau and neuronal tubulin Richard Potter, undergraduate student at University of Pennsylvania
2016/03 - 2016/07 Studying the C-terminal domain of the troponin I subunit (TnIC) through single-molecule FRET Sanju Wickramasinghe, 1st year graduate student at University of Pennsylvania (Lab rotation)
2016 - 2016 Studying the C-terminal domain of the troponin I subunit (TnIC) through single-molecule FRET Sunbin Deng, 1st year graduate student at University of Pennsylvania (Lab rotation)
2015/09 - 2015/12 Studying tau-tubulin interaction through single-molecule techniques Buyan Pan, 1st year graduate student at University of Pennsylvania (Lab rotation)
2014/02 - 2015/06 Determining a Topological Model for TAU Bound to Tubulin Heterodimers Juliana Coraor, undergraduate student at Yale Univeisty
Distinctions

Award

2022 2022 BPS Travel Award for participation in the Biophysical Society 66th Annual Meeting
Biophysical Society US, United States
2022 Maria de Sousa Award - 2nd edition
BIAL Foundation and Portuguese Medical Association, Portugal
2019 Researcher CEEC-individual FCT call (CEECIND/00884/2017) - Until 6- years contract
Fundação para a Ciência e a Tecnologia, Portugal
2017 Postdoc Research Fellowship from NSF Center for Engineering MechanoBiology (CEMB)
2016 CPOW travel award to support women in Biophysics (Biophysical Society US)
Biophysical Society US, United States
2013 Biophysical Society (USA) Student Poster Award at the 2013 EBSA Conference
2011 International Travel Awards for participation in the Biophysical Society 55th Annual Meeting
Biophysical Society US, United States
2010 FCT Graduate Research Fellowship (SFRH / BD / 61723 / 2009)
Fundação para a Ciência e a Tecnologia, Portugal

Other distinction

2016 Honorary Mention to promote PhD thesis from Portuguese Chemical Society.
2013 Fellowship to participate in the 27th Annual Symposium of The Protein Society
2012 EBSA Bursary for attendance at Iberian Peptide Meeting (EPI 2012)
2012 IUBMB/FEBS/SEBBM bursary for attendance at 22nd IUBMB & 37th FEBS Congress
2010 FEBS Youth Travel Fund (YTF) to participate in a FEBS Advanced Course
2009 Fellowships for participation in the 7th European Biophysics Congress