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He holds a Bachelor’s degree in Biomedical Informatics (University of São Paulo, 2016), a Master’s degree in Bioengineering (University of São Paulo, 2019), and a Ph.D. in Bioengineering (University of São Paulo, 2024). He completed two postdoctoral appointments: (i) a Postdoctoral Fellowship in Human and Medical Genetics (August 2024–August 2025, University of São Paulo), and (ii) a Postdoctoral Fellowship focused on the mapping of rare diseases in the Community of Portuguese Language Countries (CPLP) (February 2025–February 2026), addressing digital health approaches for international cooperation, epidemiological mapping, and data-driven public health strategies. He is currently an Assistant Researcher in the Department of Community Medicine, Information and Health Decision Sciences (MEDCIDS), Faculty of Medicine, University of Porto (FMUP), Portugal. He is also an affiliated researcher at the Health Intelligence Laboratory (LIS–FMRP/USP), registered in the CNPq Research Groups Directory. His areas of expertise include digital health, data governance and quality, semantic interoperability, artificial intelligence, and the development and validation of computational models for clinical and epidemiological research. He has extensive experience in tuberculosis research through the Brazilian Tuberculosis Research Network (REDE-TB), contributing to projects involving data integration, decision support systems, and digital health strategies. Since 2020, he has played a leading role in Brazil’s National Rare Diseases Network (RARAS), supporting national infrastructure and standardization initiatives for rare disease data. He currently serves as Manager of the RARAS Informatics Team and as a Member of the Management Committee at the National Institute of Rare Diseases (INRaras).
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Identification

Personal identification

Full name
Filipe Andrade Bernardi

Citation names

  • Bernardi, Filipe

Author identifiers

Ciência ID
9D16-B281-39A5
ORCID iD
0000-0002-9597-5470
Google Scholar ID
_zOPNiQAAAAJ&hl
LattesiD
5160054861500250
Researcher Id
rid88449
Scopus Author Id
57209738637

Email addresses

  • filipepaulista12@alumni.usp.br (Professional)
  • fbernardi@med.up.pt (Professional)

Knowledge fields

  • Exact Sciences - Computer and Information Sciences
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Medical and Health Sciences - Health Sciences - Public and Environmental Health
  • Medical and Health Sciences - Health Sciences - Epidemiology

Languages

Language Speaking Reading Writing Listening Peer-review
English Upper intermediate (B2) Advanced (C1) Advanced (C1) Advanced (C1) Upper intermediate (B2)
Portuguese (Mother tongue)
Italian Advanced (C1) Proficiency (C2) Proficiency (C2) Proficiency (C2) Advanced (C1)
Education
Degree Classification
2025/02/01 - 2026/02/01
Concluded
 Postdoctoral Research in Rare Disease Mapping in the Community of Portuguese Language Countries (CPLP) (Pós-doutoramento)
Major in Digital Health; Rare Diseases; Epidemiological Mapping; Data Governance
Instituto de Engenharia de Sistemas e Computadores de Coimbra, Portugal
2024/08/01 - 2025/08/01
Concluded
 Postdoctoral Fellowship in Human and Medical Genetics (Pós-doutoramento)
Major in Human and Medical Genetics; Rare Diseases; Genomic Data Integration
Universidade de São Paulo Faculdade de Medicina de Ribeirão Preto, Brazil
2019/08/30 - 2024/04/19
Concluded
 Interunidades em Bioengenharia (Doktor (PhD))
Major in Bioengenharia
Universidade de São Paulo Escola de Engenharia de São Carlos, Brazil
"Digital health research governance: from FAIR to RE-AIM" (THESIS/DISSERTATION)
2017/02/01 - 2019/08/01
Concluded
 Mestrado em Bioengenharia (Master)
Major in Bioengenharia
Universidade de São Paulo Escola de Engenharia de São Carlos, Brazil
"Protocolo Clínico de AvaliaçãoMiofuncional Orofacial com Escores (AMIOFE)com base em Tecnologia Web (AMIOFEWEB)" (THESIS/DISSERTATION)
2011/02/01 - 2016/08/04
Concluded
 Informática Biomédica (Bachelor)
Universidade de São Paulo Faculdade de Medicina de Ribeirão Preto, Brazil
"PROTOCOLO DE AVALIAÇÃOMIOFUNCIONAL OROFACIAL COM ESCORESINFORMATIZADO Versão Web." (THESIS/DISSERTATION)
 10
Affiliation

Science

Category
Host institution 		Employer
2019/02/10 - Current Science and Technology Management Brazilian Tuberculosis Research Network (REDE-TB), Brazil
2025/03/17 - 2026/06/30 Contracted Researcher (Research) Universidade do Porto Faculdade de Medicina, Portugal
2017/02/01 - 2025/03/09 Researcher (Research) Universidade de São Paulo Faculdade de Medicina de Ribeirão Preto, Brazil
Projects

Grant

Designation Funders
2020/04/01 - Current National Network of Rare Diseases (RARAS)
10.5281/zenodo.13643431
Science and Technology Management Fellow
Conselho Nacional de Desenvolvimento Científico e Tecnológico
Ongoing

Contract

Designation Funders
2020/04/14 - Current Uso de BCG como prevenção de Covid 19 emprofissionais de saúde
01
Technical development
2019/10/05 - Current Validação e custo de PPD recombinante nodiagnóstico de tuberculose infecção
02
Researcher
Conselho Nacional de Desenvolvimento Científico e Tecnológico
2019/03/03 - Current Desenvolvimento e validação de modeloscomputacionais operativos para a cascatadiagnostica e terapêutica da TB resistente, pormeio da análise clínica e econômica dosequenciamento gênico direcionado de novageração
01
Technical development
Conselho Nacional de Desenvolvimento Científico e Tecnológico
2019/02/04 - Current Validar a performance do Line Probe Assaycomo método de diagnóstico rápido paratuberculose resistente em centros de referênciano Brasil.
02
Researcher
Conselho Nacional de Desenvolvimento Científico e Tecnológico
2023/03/04 - 2025/07/15 Scaling up TPT in Brazil: a cascade of careapproach. The way forward to reverse thepandemic setback
10429
Technical development
Stop TB Partnership
2021/03/02 - 2024/03/04 Saúde digital para a estratégia End TB: daintegração de dados ligados a uma melhortomada de decisão baseada em evidências
01
Researcher
Fundação de Amparo à Pesquisa do Estado de São Paulo
2019/05/03 - 2023/12/05 Ensaio clínico prospectivo multicêntrico paraavaliar a acurácia diagnóstica do métodoTruenat nas apresentações indicadas para usona rotina
01
Technical development
Conselho Nacional de Desenvolvimento Científico e Tecnológico
2019/04/07 - 2021/12/04 Estudo Longitudinal dos Impactos do SuporteSocial Indicadores OperacionaiS daTuberculose- ELISIOS-TB
01
Science and Technology Management Fellow

Other

Designation Funders
2024/01/08 - 2025/08/01 Development of a Minimum Genomic Data Set for Rare Diseases in Brazil: A Delphi Approach
Post-doc
Universidade de São Paulo Faculdade de Medicina de Ribeirão Preto, Brazil
Outputs

Publications

Book
  1. Lima, V.; Bernardi, F.; Rijo, R.; Ueyama, J.; Alves, D.. A Mechanism for Verifying the Integrity and Immutability of Tuberculosis Data sing IOTA Distributed Ledger Technology. 2021.
    10.3233/SHTI210099
  2. Yamada, D.B.; Bernardi, F.A.; Miyoshi, N.S.B.; de Lima, I.B.; Vinci, A.L.T.; Yoshiura, V.T.; Alves, D.. Ontology-based inference for supporting clinical decisions in mental health. 2020.
    10.1007/978-3-030-50423-6_27
  3. Lima, V.; Bernardi, F.; Pellison, F.; Rijo, R.; Kritski, A.; Galliez, R.; Alves, D.. Decision Support Systems for Tuberculosis: Protocol for a Scoping Review. 2019.
    10.3233/SHTI190027
  4. Bernardi, F.; Lima, V.; Pellison, F.; De Azevedo Marques, P.M.; Rijo, R.; Galliez, R.M.; Kritski, A.; Alves, D.. Blockchain ased Network for Tuberculosis: Data Sharing Initiative in Brazil. 2019.
    10.3233/SHTI190069
Book chapter
  1. Vinícius Costa Lima; Nathalia Yukie Crepaldi; Filipe Andrade Bernardi; Renan Barbieri Segamarchi; Domingos Alves. "SISTB: A Health Information System for the Management of Tuberculosis Cases". 2024.
    10.1007/978-3-031-64359-0_37
  2. Victor Cassão; Filipe Andrade Bernardi; Vinícius Costa Lima; Giovane Thomazini Soares; Newton Shydeo Brandão Miyoshi; Ana Clara de Andrade Mioto; Afrânio Kritski; Domingos Alves. "A Web Portal for Real-Time Data Quality Analysis on the Brazilian Tuberculosis Research Network: A Case Study". 2023.
    10.1007/978-3-031-36024-4_24
  3. Pedro Emilio Andrade Martins; Márcio Eloi Colombo Filho; Ana Clara de Andrade Mioto; Filipe Andrade Bernardi; Vinícius Costa Lima; Têmis Maria Félix; Domingos Alves. "Supervised Machine Learning Techniques Applied to Medical Records Toward the Diagnosis of Rare Autoimmune Diseases". 2023.
    10.1007/978-3-031-36024-4_13
  4. Filipe Bernardi; Vinicius Lima; Gabriel Sartoretto; João Baiochi; Victor Cassão; Afrânio Kritski; Rui Rijo; Domingos Alves. "From Raw Data to FAIR Data: The FAIRification Workflow for Brazilian Tuberculosis Research". 2023.
    10.3233/SHTI230497
  5. Isabelle Carvalho; Mariane Barros Neiva; Newton Shydeo Brandão Miyoshi; Nathalia Yukie Crepaldi; Filipe Andrade Bernardi; Vinícius Costa Lima; Ketlin Fabri dos Santos; et al. "Knowledge Discovery in Databases: Comorbidities in Tuberculosis Cases". 3-13. Springer International Publishing, 2022.
    10.1007/978-3-031-08757-8_1
  6. Márcio Eloi Colombo Filho; Rafael Mello Galliez; Filipe Andrade Bernardi; Lariza Laura de Oliveira; Afrânio Kritski; Marcel Koenigkam Santos; Domingos Alves. "Preliminary Results on Pulmonary Tuberculosis Detection in Chest X-Ray Using Convolutional Neural Networks". 563-576. Springer International Publishing, 2020.
    10.1007/978-3-030-50423-6_42
Conference paper
  1. Vinícius Costa Lima; Domingos Alves; Filipe Andrade Bernardi; Rui Pedro Charters Lopes Rijo. "Security approaches for electronic health data handling through the Semantic Web: A scoping review". 2023.
    10.3233/sw-223088
  2. Soares Arnizant, T.F.; Bernardi, F.A.; Michelin Sanchez, T.L.; Crepaldi, N.Y.; Do Prado, T.N.; Novaes, M.T.; Noia Maciel, E.L.; Alves, D.. "My Latent Tuberculosis Treatment - Mobile application to assist in adherence to latent tuberculosis treatment". 2021.
    10.1016/j.procs.2021.12.059
  3. Bernardi, F.A.; Lima, V.C.; Sampaio, D.M.; Dos Santos, M.C.; Lopes Rijo, R.P.C.; Alves, D.. "TBI Score - Use of a mobile score system to aid the diagnosis of tuberculosis in children in Brazil". 2021.
    10.1016/j.procs.2021.12.041
  4. Lima, V.C.; Bernardi, F.A.; Domingues, M.; Kritski, A.L.; Lopes Rijo, R.P.C.; Alves, D.. "A computational infrastructure for semantic data integration towards a patient-centered database for Tuberculosis care". 2021.
    10.1016/j.procs.2021.12.033
  5. Carvalho, I.; Bernardi, F.A.; Neiva, M.B.; Lima, V.C.; De Oliveira, L.L.; Brandão Miyoshi, N.S.; Michelin Sanches, T.L.; et al. "COVID-19 BR: A web portal for COVID-19 information in Brazil". 2021.
    10.1016/j.procs.2021.12.045
  6. Bernardi, F.A.; Yamada, D.B.; De Oliveira, B.M.; Lima, V.C.; Félix, T.M.; Alves, D.. "The minimum dataset for rare diseases in Brazil: A systematic review protocol". 2021.
    10.1016/j.procs.2021.12.034
  7. da Costa, L.M.A.; Bernardi, F.A.; Sanches, T.L.M.; Kritski, A.; Galliez, R.M.; Alves, D.. "Operational modeling for testing diagnostic tools impact on tuberculosis diagnostic cascade: A model design". 2021.
    10.1016/j.procs.2021.01.214
  8. Cassão, V.; Alves, D.; De Andrade Mioto, A.C.; Bernardi, F.A.; Brandão Miyoshi, N.S.. "Unsupervised analysis of COVID-19 pandemic evolution in brazilian states". 2021.
    10.1016/j.procs.2021.12.061
  9. Teixeira, J.C.C.; Bernardi, F.A.; Rijo, R.P.C.L.; Alves, D.. "Proposal for a health information management model based on Lean thinking". 2021.
    10.1016/j.procs.2021.01.306
  10. Filipe Andrade Bernardi; Paulo Mazzoncini de Azevedo Marques; Felipe Carvalho Pellison; Domingos Alves; Vinicius Lima; Afrânio Lineu Kritski; Rafael Mello Galliez; Rui Rijo. "Blockchain Based Network for Tuberculosis: A Data Sharing Initiative in Brazil.". 2019.
    10.3233/shti190069
  11. Crepaldi, N.Y.; Lima, V.C.; Bernardi, F.A.; Albano Santos, L.R.; Yamaguti, V.H.; Pellison, F.C.; Michelin Sanches, T.L.; et al. "SISTB: An ecosystem for monitoring TB". 2019.
    10.1016/j.procs.2019.12.224
  12. Dos Santos, L.R.A.; Bernardi, F.A.; Silva Prado, G.C.; Lima, V.C.; Crepaldi, N.Y.; Marçal, M.A.; Lopes Rijo, R.P.C.; et al. "The perception of health providers about an artificial intelligence applied to Tuberculosis video-based treatment in Brazil: A protocol proposal". 2019.
    10.1016/j.procs.2019.12.225
  13. Dos Santos, L.R.A.; Anselmo, L.M.P.; Oliveira, L.S.; Merli, F.S.; Silva, C.C.; Prado, G.C.S.; Crepaldi, N.Y.; et al. "TBM-App: A clinical decision support system for tuberculous meningitis". 2019.
    10.1016/j.procs.2019.12.221
  14. Lima, V.; Pellison, F.; Bernardi, F.; Carvalho, I.; Rijo, R.; Alves, D.. "Proposal of an integrated decision support system for Tuberculosis based on Semantic Web". 2019.
    10.1016/j.procs.2019.12.219
Journal article
  1. Filipe Andrade Bernardi; Vinícius Costa Lima; Mateus Alonso; Bibiana Mello de Oliveira; Claudia Fernandes Lorea; José Carlos Moraes; Victor Cassão; et al. "Paving the way for Brazil’s first national rare diseases registry: the RARAS data governance model". BMC Digital Health (2025): https://doi.org/10.1186/s44247-025-00200-5.
    10.1186/s44247-025-00200-5
  2. Domingos Alves; Filipe Andrade Bernardi; Diego Bettiol Yamada; Vinicius Costa Lima; Tatiana Takahasi Komoto; Victor Cassão; Michele de Souza Seixas; et al. "Promoting Comprehensive Care for People with Rare Diseases in a Tertiary Care Setting in Brazil: Protocol for a Mixed Methods Implementation Study (Preprint)". JMIR Research Protocols (2024): https://doi.org/10.2196/68949.
    10.2196/68949
  3. de Oliveira, Bibiana Mello; Bernardi, Filipe Andrade; Baiochi, João Francisco; Neiva, Mariane Barros; Artifon, Milena; Vergara, Alberto Andrade; Martins, Ana Maria; et al. "Epidemiological characterization of rare diseases in Brazil: A retrospective study of the Brazilian Rare Diseases Network". Orphanet Journal of Rare Diseases 19 1 (2024): http://dx.doi.org/10.1186/s13023-024-03392-7.
    10.1186/s13023-024-03392-7
  4. Mozini, Mariana; Rothschild, Raul; Mioto, Ana Clara; Bernardi, Filipe; Lima, Vinícius; Soares, Giovane; Segamarchi, Renan; Alves, Domingos. "OUTB: application for decision-support in the outcomes of Tuberculosis". Procedia Computer Science 239 (2024): 832-839. http://dx.doi.org/10.1016/j.procs.2024.06.241.
    10.1016/j.procs.2024.06.241
  5. de Andrade Mioto, Ana Clara; Andrade Martins, Pedro Emilio; Modina, Gabriel; Alves, Domingos; Lima, Vinicius Costa; Neiva, Mariane; Bernardi, Filipe Andrade. "Quality analysis and study of tuberculosis diagnostic data". Procedia Computer Science 239 (2024): 939-946. http://dx.doi.org/10.1016/j.procs.2024.06.255.
    10.1016/j.procs.2024.06.255
  6. Bernardi, Filipe Andrade; Alves, Domingos; Crepaldi, Nathalia; Yamada, Diego Bettiol; Lima, Vinícius Costa; Rijo, Rui. "Data Quality in Health Research: Integrative Literature Review". Journal of Medical Internet Research 25 (2023): e41446. http://dx.doi.org/10.2196/41446.
    10.2196/41446
  7. Filipe Andrade Bernardi; Bibiana Mello de Oliveira; Diego Bettiol Yamada; Milena Artifon; Amanda Maria Schmidt; Victória Machado Scheibe; Domingos Alves; Têmis Maria Félix. "The Minimum Data Set for Rare Diseases: Systematic Review". Journal of Medical Internet Research (2023): https://doi.org/10.2196/44641.
    10.2196/44641
  8. Mozini M; Bernardi F; Mioto AC; Cassão V; Kritski A; Alves D. "A Computational Infrastructure for Analyzing Tuberculosis Research Data in Brazil.". Studies in health technology and informatics (2023): http://europepmc.org/abstract/med/37387091.
    10.3233/shti230557
  9. Reis M; Bernardi F; Lima V; Alves D. "Development of a Mobile Application with Health Guidelines for TB Patients Care.". Studies in health technology and informatics (2023): http://europepmc.org/abstract/med/37387043.
    10.3233/shti230509
  10. Lima VC; Rijo RPCL; Bernardi FA; Filho MEC; Barbosa-Junior F; Pellison FC; Galliez RM; Kritski AL; Alves D. "REDbox: a comprehensive semantic framework for data collection and management in tuberculosis research.". Scientific reports (2023): http://europepmc.org/abstract/med/37169802.
    10.1038/s41598-023-33492-6
  11. Maria Carolina Gironde Ataide; Filipe Andrade Bernardi; Paulo Mazzoncini de Azevedo Marques; Cláudia Maria de Felício. "Web version of the protocol of the orofacial myofunctional evaluation with scores: usability and learning". CoDAS (2023): https://doi.org/10.1590/2317-1782/20232022026.
    10.1590/2317-1782/20232022026
  12. Mariane Barros Neiva; André Luiz Teixeira Vinci; Diego Bettiol Yamada; Filipe Andrade Bernadi; Giovane Thomazini Soares; Vinicius Costa Lima; Domingos Alves; Têmis Maria Félix. "Informed Consent Form Automated Validation, The Brazilian Rare Disease Network Case Proposal". Procedia Computer Science 219 (2023): 1538-1545. http://dx.doi.org/10.1016/j.procs.2023.01.445.
    10.1016/j.procs.2023.01.445
  13. Filipe Andrade Bernardi; Domingos Alves; Mariane Barros Neiva; Diego Bettiol Yamada; Vinicius Costa Lima; André Vinci; Giovane Thomazini; Rui Rijo; Têmis Maria Felix. "A proposal for a set of attributes relevant for Web portal data quality: The Brazilian Rare Disease Network case". Procedia Computer Science 219 (2023): 1316-1324. http://dx.doi.org/10.1016/j.procs.2023.01.416.
    10.1016/j.procs.2023.01.416
  14. Soares, Giovane Thomazini; Yamada, Diego Bettiol; Bernardi, Filipe Andrade; Neiva, Mariane Barros; Junior, Luis Pedro Lombardi; Vinci, André Luiz Teixeira; Mioto, Ana Clara de Andrade; Alves, Domingos. "Scaling laws and spatial effects of Brazilian health regions: a research protocol". Procedia Computer Science 219 (2023): 1325-1332. http://dx.doi.org/10.1016/j.procs.2023.01.417.
    10.1016/j.procs.2023.01.417
  15. Félix, T.M.; de Oliveira, B.M.; Artifon, M.; Carvalho, I.; Bernardi, F.A.; Schwartz, I.V.D.; Saute, J.A.; et al. "Epidemiology of rare diseases in Brazil: protocol of the Brazilian Rare Diseases Network (RARAS-BRDN)". Orphanet journal of rare diseases 17 1 (2022): 84-84. http://www.scopus.com/inward/record.url?eid=2-s2.0-85125359071&partnerID=MN8TOARS.
    10.1186/s13023-022-02254-4
  16. Soares Arnizant, Thomaz Felipe; Bernardi, Filipe Andrade; Michelin Sanchez, Tiago Lara; Crepaldi, Nathalia Yukie; do Prado, Thiago Nascimento; Novaes, Marcelle Temporim; Noia Maciel, Ethel Leonor; Alves, Domingos. "My Latent Tuberculosis Treatment - mobile application to assist in adherence to latent tuberculosis treatment". Procedia Computer Science 196 (2022): 640-646. http://dx.doi.org/10.1016/j.procs.2021.12.059.
    10.1016/j.procs.2021.12.059
  17. Domingos Alves; Diego Bettiol Yamada; Filipe Andrade Bernardi; Isabelle Carvalho; Márcio Eloi Colombo Filho; Mariane Barros Neiva; Vinícius Costa Lima; Têmis Maria Félix. "Mapping, Infrastructure, and Data Analysis for the Brazilian Network of Rare Diseases: Protocol for the RARASnet Observational Cohort Study". JMIR Research Protocols (2021): https://doi.org/10.2196/24826.
    10.2196/24826
  18. Lima, V.C.; Pellison, F.C.; Bernardi, F.A.; Alves, D.; Rijo, R.P.C.L.. "Security framework for tuberculosis health data interoperability through the semantic web". International Journal of Web Portals 13 2 (2021): 36-57. http://www.scopus.com/inward/record.url?eid=2-s2.0-85114348827&partnerID=MN8TOARS.
    10.4018/IJWP.2021070103
  19. Inacia Bezerra de Lima; Filipe Andrade Bernadi; Diego Bettiol Yamada; Andre Luiz Teixeira Vinci; Rui Pedro Charters Lopes Rijo; Domingos Alves; Antonia Regina Ferreira Furegato. "The use of indicators for the management of Mental Health Services". Revista Latino-Americana de Enfermagem (2021): https://doi.org/10.1590/1518-8345.4202.3409.
    10.1590/1518-8345.4202.3409
  20. Bernardi, F.A.; Lima, V.C.; Rijo, R.P.C.L.; Alves, D.. "More than words: An analysis of brazilian emotions during covid-19,Mais do que palavras: Uma análise das emoções brasileiras durante a covid-19". RISTI - Revista Iberica de Sistemas e Tecnologias de Informacao 2021 E40 (2021): 526-541. http://www.scopus.com/inward/record.url?eid=2-s2.0-85101939469&partnerID=MN8TOARS.
  21. Janaina Pereira da Silva; Filipe Andrade Bernardi; Juliana Constantino Franzon; Leonardo Orlandin; Gustavo Zanelatto Ferlin; Gerson Alves Pereira Júnior. "Aplicação de insulina passo a passo: construção de vídeos educativos para pacientes e cuidadores". Escola Anna Nery 25 1 (2021): https://doi.org/10.1590/2177-9465-ean-2019-0343.
    10.1590/2177-9465-ean-2019-0343
  22. Felipe Carvalho Pellison; Rui Pedro Charters Lopes Rijo; Vinicius Costa Lima; Nathalia Yukie Crepaldi; Filipe Andrade Bernardi; Rafael Mello Galliez; Afrânio Kritski; Kumar Abhishek; Domingos Alves. "Data Integration in the Brazilian Public Health System for Tuberculosis: Use of the Semantic Web to Establish Interoperability". JMIR Medical Informatics 8 7 (2020): e17176-e17176. https://doi.org/10.2196/17176.
    10.2196/17176
  23. Lima, V.C.; Bernardi, F.A.; Alves, D.; Kritski, A.L.; Galliez, R.M.; Rijo, R.P.C.L.. "A Permissioned Blockchain Network for Security and Sharing of De-identified Tuberculosis Research Data in Brazil". Methods of Information in Medicine 59 6 (2020): 205-218. http://www.scopus.com/inward/record.url?eid=2-s2.0-85104635935&partnerID=MN8TOARS.
    10.1055/s-0041-1727194
  24. Neiva, M.B.; Carvalho, I.; Filho, E.S.C.; Barbosa-Junior, F.; Bernardi, F.A.; Sanches, T.L.M.; de Oliveira, L.L.; et al. "Brazil: The emerging epicenter of COVID-19 pandemic". Revista da Sociedade Brasileira de Medicina Tropical 53 (2020): 1-8. http://www.scopus.com/inward/record.url?eid=2-s2.0-85094843653&partnerID=MN8TOARS.
    10.1590/0037-8682-0550-2020
  25. Pereira Júnior, Gerson Alves; Santos, Marcelo Alexandre; Bernardi, Filipe Andrade; Ferreira, William Dias; Senju, André Antonelli; Jesus, Thaís Helena de Paula; Gula, Eduardo Alexandre. "Desenvolvimento de Plataforma Digital para Ensino de Graduação (Caso do ensino de atendimento ao paciente traumatizado)". Revista de Graduação USP 2 1 (2017): 13. http://dx.doi.org/10.11606/issn.2525-376x.v2i1p13-23.
    10.11606/issn.2525-376x.v2i1p13-23
Preprint
  1. Rita Ribeiro; Izabela Calvi; Francisco Ferreira; Vinícius Lima; Filipe Bernardi; Luís Conceição; Goreti Marreiros; Alberto Freitas. "Photoplethysmography in Healthcare: An Umbrella Review of Clinical Applications, Validation, and Evidence Gaps (Preprint)". 2026. https://doi.org/10.2196/preprints.91812.
    10.2196/preprints.91812
  2. Izabela Pera Calvi; Filipe Andrade Bernardi; Francisco Ferreira; Vinícius Costa Lima; Isabela Carvalho Guerche; Tiago Silva; Duarte Azevedo Moura Dias; et al. "Wearables and Machine Learning Use for Activity of Daily Life and Fall Management in the Elderly: A Systematic Review (Preprint)". 2026. https://doi.org/10.2196/preprints.93640.
    10.2196/preprints.93640
  3. Domingos Alves; Filipe Andrade Bernardi; Diego Bettiol Yamada; Vinicius Costa Lima; Tatiana Takahasi Komoto; Victor Cassão; Michele de Souza Seixas; et al. "Promoting Comprehensive Care for People with Rare Diseases: Strengthening the Care, Registration and Awareness Network at Clinics Hospital of Ribeirão Preto (Preprint)". 2024. https://doi.org/10.2196/preprints.68949.
    10.2196/preprints.68949
  4. Filipe Andrade Bernardi; Bibiana Mello de Oliveira; Diego Bettiol Yamada; Milena Artifon; Amanda Maria Schmidt; Victória Machado Scheibe; Domingos Alves; Têmis Maria Félix. "The Minimum Dataset for Rare Diseases: A Systematic Review (Preprint)". 2022. https://doi.org/10.2196/preprints.44641.
    10.2196/preprints.44641
  5. Filipe Andrade Bernardi; Domingos Alves; Nathalia Yukie Crepaldi; Diego Bettiol Yamada; Vinícius Costa Lima; Rui Pedro Charters Lopes Rijo. "Data Quality in health research: an integrative literature review (Preprint)". 2022. https://doi.org/10.2196/preprints.41446.
    10.2196/preprints.41446
  6. Filipe Andrade Bernardi; Domingos Alves; Nathalia Yukie Crepaldi; Diego Bettiol Yamada; Vinícius Costa Lima; Rui Pedro Charters Lopes Rijo. "Data Quality in health research: a systematic literature review". 2022. https://doi.org/10.1101/2022.05.31.22275804.
    10.1101/2022.05.31.22275804
  7. Lima VC; Rijo RPCL; Bernardi FA; Filho MEC; Júnior FB; Pellison FC; Galliez RM; Kritski AL; Alves D. "REDbox: a comprehensive semantic framework for data collection and management in tuberculosis research". 2022. http://europepmc.org/abstract/PPR/PPR551128.
    10.21203/rs.3.rs-493080/v2
Thesis / Dissertation
  1. Bernardi, Filipe Andrade. "Digital health research governance: from FAIR to RE-AIM". PhD, 2024. http://dx.doi.org/10.11606/t.82.2024.tde-05072024-092611.
    10.11606/t.82.2024.tde-05072024-092611

Other

Annotation
  1. 2024. "2024 Ownership and Maintenance of FAIRsharing record: RARASBR". United Kingdom.
Dataset
  1. Filipe Bernardi. EDUCA Dra. Sofia - Rare Diseases Educational Dataset. 2025.
    10.5281/zenodo.17471863
  2. FAIRsharing Team; Filipe Andrade Bernardi; Márcio Eloi Colombo Filho; Diego Bettiol Yamada. FAIRsharing record for: Brazilian Rare Disease Portal. 2024.
    10.25504/fairsharing.d7b6c8
  3. Têmis Maria Félix; Filipe Andrade Bernardi; Vinicius Costa Lima; Diego Bettiol Yamada; Mariane Barros Neiva; Márcio Eloi Colombo Filho; Andre Vinci; et al. Registro Nacional de Doenças Raras. 2023.
    10.57810/lattesdata/xel53o
Other output
  1. Mapping, Infrastructure, and Data Analysis for the Brazilian Network of Rare Diseases: Protocol for the RARASnet Observational Cohort Study (Preprint). 2020. Domingos Alves; Diego Bettiol Yamada; Filipe Andrade Bernardi; Isabelle Carvalho; Márcio Eloi Colombo Filho; Mariane Barros Neiva; Vinícius Costa Lima; Têmis Maria Félix. https://doi.org/10.2196/preprints.24826.
    10.2196/preprints.24826
  2. Data Integration in the Brazilian Public Health System for Tuberculosis: Use of the Semantic Web to Establish Interoperability (Preprint). 2019. Felipe Carvalho Pellison; Rui Pedro Charters Lopes Rijo; Vinicius Costa Lima; Nathalia Yukie Crepaldi; Filipe Andrade Bernardi; Rafael Mello Galliez; Afrânio Kritski; Kumar Abhishek; Domingos Alves. https://doi.org/10.2196/preprints.17176.
    10.2196/preprints.17176
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2021/11/12 The minimum dataset for rare diseases in Brazil: a systematic review protocol. Health and Social Care Information Systems and Technologies (HCist)
2021 TBI Score - use of a mobile score system to aid the diagnosis of tuberculosis in children in Brazil Health and Social Care Information Systems and Technologies (HCist)
2020/11/10 Sentiment analysis on Brazilian tweets regarding social isolation and quarantine during COVID-19 pandemic Health and Social Care Information Systems and Technologies (HCist)
(Portugal)
Distinctions

Award

2024 3rd highest ranked poster - 2024 Poster award - Inform Meeting: Fatty Acid Beta-Oxidation Disorders: A case series from the Brazilian Rare Diseases Network, International Network for Fatty Acid Oxidation Research & Management (INFORM).
2024 Mejor trabajo científico en Pesquisa Neonatal - Newborn screening and the diagnosis of rare diseases: A retrospective study from the Brazilian Rare Diseases Network, XIII Congreso de la Sociedad Latinoamericana de Errores Innatos del Metabolismo y Pesquis
2023 Prêmio Genética para Todos - 1º Lugar - Trabalho CARACTERIZAÇÃO EPIDEMIOLÓGICA DAS DOENÇAS RARAS NO BRASIL: DADOS DA REDE NACIONAL DE DOENÇAS RARAS, Instituto Genética Para Todos.
2021 REDbox - A comprehensiveframework for data collection in tuberculosisresearch, REDCapCon - 2nd Latin American &Brazilan REDCap