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Identification

Personal identification

Full name
JOSE DAMIAN MARTINEZ REYES

Citation names

  • Martínez, Damián

Author identifiers

Ciência ID
9513-B54E-EDF4
ORCID iD
0000-0002-5906-598X
Google Scholar ID
https://scholar.google.com/citations?user=IvBay4AAAAAJ&hl

Email addresses

  • damian.martinez@itqb.unl.pt (Professional)

Knowledge fields

  • Natural sciences - Biological Sciences
  • Exact Sciences - Computer and Information Sciences - Bioinformatics

Languages

Language Speaking Reading Writing Listening Peer-review
Spanish; Castilian (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2021/09/01 - 2026
Ongoing
 Integrative Biology and Biomedicine (Doutoramento)
Instituto Gulbenkian de Ciência, Portugal
2014 - 2019/02/14
Concluded
 Licenciatura en Ciencias Genómicas (Bachelor)
Universidad Nacional Autónoma de México Centro de Ciencias Genómicas, Mexico
 9.68/10
Outputs

Publications

Conference poster
  1. Martinez-Reyes, Jose Damian; Guerrero-Cardenas, Adan O.. "Non-stationary Noise Analysis on Single channel activity modeling". 2018.
Journal article
  1. Romain F. Laine; Hannah S. Heil; Simao Coelho; Jonathon Nixon-Abell; Angélique Jimenez; Theresa Wiesner; Damián Martínez; et al. "High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation". Nature Methods (2023): http://dx.doi.org/10.1038/s41592-023-02057-w.
    10.1038/s41592-023-02057-w
  2. Esley Torres-García; Raúl Pinto-Cámara; Alejandro Linares; Damián Martínez; Víctor Abonza; Eduardo Brito-Alarcón; Carlos Calcines-Cruz; et al. "Extending resolution within a single imaging frame". Nature Communications (2022): https://doi.org/10.1038/s41467-022-34693-9.
    10.1038/s41467-022-34693-9
  3. Alma Alva; Eduardo Brito-Alarcon; Alejandro Linares; Esley Torres-García; Haydee O. Hernández; Raúl Pinto-Cámara; Damián Martínez; et al. "Fluorescence fluctuation-based super-resolution microscopy: Basic concepts for an easy start". Journal of Microscopy (2022): http://dx.doi.org/10.1111/jmi.13135.
    10.1111/jmi.13135
  4. "Identification of small open reading frames (sORFs) associated with heat tolerance in nitrogen-fixing root nodules of Phaseolus vulgaris wild-type and cv BAT93". Special Issue 2021 15(09):202 (2021): 28-37. http://dx.doi.org/10.21475/ajcs.21.15.09.sp-3.
    10.21475/ajcs.21.15.09.sp-3
  5. R Pinto-Cámara; A Linares; D. S Moreno-Gutiérrez; H. O Hernández; J. D Martínez-Reyes; J. M Rendón-Mancha; C. D Wood; A Guerrero; Jinbo Xu. "FCSlib: an open-source tool for fluorescence fluctuation spectroscopy analysis for mobility, number and molecular brightness in R". Bioinformatics 37 13 (2021): 1930-1931. https://doi.org/10.1093/bioinformatics/btaa876.
    10.1093/bioinformatics/btaa876
Preprint
  1. Alma Alva; Eduardo Brito-Alarcón; Alejandro Linares; Esley Torres-García; Haydeé O. Hernández; Raúl Pinto-Cámara; Damián Martínez; et al. "Fluorescence fluctuation based super resolution microscopy, basic concepts for an easy start". 2022. https://doi.org/10.1101/2022.05.06.490863.
    10.1101/2022.05.06.490863
  2. Esley García; Raúl Cámara; Alejandro Linares; Damián Martínez; Víctor Abonza; Eduardo Brito-Alarcon; Carlos Calcines-Cruz; et al. "Nanoscopic resolution within a single imaging frame". 2021. https://doi.org/10.21203/rs.3.rs-984659/v1.
    10.21203/rs.3.rs-984659/v1
  3. Esley Torres García; Raúl Pinto Cámara; Alejandro Linares; Damián Martínez; Víctor Abonza; Eduardo Brito-Alarcón; Carlos Calcines-Cruz; et al. "Nanoscopic resolution within a single imaging frame". 2021. https://doi.org/10.1101/2021.10.17.464398.
    10.1101/2021.10.17.464398
Activities

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2020/08 - 2021/06 Teacher assistant for the course on Differential Equations 1 and 2 for the Undergraduate Program in Genome Sciences, UNAM. Roles included imparting some lectures, grading exams and tutoring. Professor: Julio Martinez. Differential Equations 1&2 (Bachelor (1st cycle)) Universidad Nacional Autónoma de México Instituto de Biotecnología, Mexico
2018/08 - 2018/12 Teacher assistant for the course on Integral and Differential Calculus for the Undergraduate Program in Genome Sciences, UNAM. Roles included imparting some lectures, grading exams and tutoring. Professor: Beatriz Limón, PhD. Calculus (Bachelor) Universidad Nacional Autónoma de México Instituto de Biotecnología, Mexico

Scientific expedition

Activity description Institution / Organization
2018/01 - 2018/05 Research visitor at the University of California, Irvine. Supervised by Dr. Enrico Gratton, the objective of the project was to learn and apply advanced concepts of fluorescence spectroscopy. This included laboratory work and participation in the course of "Spectroscopy and Imaging of Biological Systems" from the Biomedical Engineering program. This work was funded by the National Autonomous University of Mexico. University of California Irvine, United States
2017/01 - 2017/02 Research visitor under supervision of Dr. Araxi Urrutia. Training period on analysis of alternative splicing of mRNA across multicellularity. Funded by UNAM scholarship. University of Bath Department of Biology and Biochemistry, United Kingdom