Identification
Personal identification
- Full name
- Filipe José Oliveira Costa
Citation names
- Costa, Filipe
- Filipe O. Costa
- Filipe Oliveira Costa
Author identifiers
- Ciência ID
- 7318-9608-6D8C
- ORCID iD
- 0000-0001-5398-3942
- Google Scholar ID
- https://scholar.google.com/citations?hl=en&user=HEjsbcIAAAAJ
- Researcher Id
- B-5890-2009
- Scopus Author Id
- 7201976261
Websites
- https://cbma.uminho.pt/people_cbma/filipe-costa/ (Professional)
- https://me-barcode.weebly.com/ (Professional)
Knowledge fields
- Natural sciences - Biological Sciences - Marine Biology
Education
Degree | Classification | |
---|---|---|
1998 - 2002
Concluded
|
PhD (Doutoramento)
Major in Ciências do Ambiente
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Integrated research on ecology, genetics and ecotoxicology of Gammarus locusta (L.): the model organism approach" (THESIS/DISSERTATION)
|
Unanimous approval |
1997
Concluded
|
Ecologia, Gestão e Modelação de Recursos Marinhos (Mestrado)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Gammarus locusta (L.) (Crustacea) in ecotoxicological testing: ecology, laboratory culturing and sensitivity to non-contaminant
variables." (THESIS/DISSERTATION)
|
Muito Bom / Very good |
1993
Concluded
|
Biologia Marinha e Pescas (Licenciatura)
Universidade do Algarve, Portugal
"Screening of oestrogenicity of xenobiotics based in competition studies for oestradiol receptor of rainbow trout Oncorhynchus
mykiss" (THESIS/DISSERTATION)
|
Bom / Good |
Affiliation
Teaching in Higher Education
Category Host institution |
Employer | |
---|---|---|
2019/05 - Current | Associate Professor (University Teacher) | Universidade do Minho, Portugal |
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal | ||
2008/01/02 - 2019 | Assistant Professor (University Teacher) | Universidade do Minho, Portugal |
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
Positions / Appointments
Category Host institution |
Employer | |
---|---|---|
2024/09/01 - Current | Driector of the Masters in Molecular Genetics | Universidade do Minho, Portugal |
Universidade do Minho Escola de Ciências, Portugal | ||
2024/04 - Current | Coordinator of the Computing Life Research Group | Universidade do Minho, Portugal |
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal | ||
2016/09/01 - 2018/09/01 | Director of the Applied Biology degree | Universidade do Minho, Portugal |
Universidade do Minho, Portugal |
Others
Category Host institution |
Employer | |
---|---|---|
2006/01/01 - 2007/12/31 | Marie Curie Fellow / Senior Research Fellow | Bangor University, United Kingdom |
2003/09/22 - 2004/12/15 | Postdoctoral Researcher | University of Guelph, Canada |
2003/02/01 - 2003/08/31 | Postdoctoral Researcher | Texas Tech University, United States |
2000/05/01 - 2000/08/31 | Visiting PhD student | Texas A&M University Department of Biology, United States |
1999/05/01 - 1999/06/30 | Visiting PhD student | Texas A&M University Department of Biology, United States |
Projects
Grant
Designation | Funders | |
---|---|---|
2024/09/01 - Current | Exploratory study on the use of DNA technology to improve the effectiveness of monitoring and management of fisheries resources
in Guinea-Bissau
PALOP/BD/155065/2024
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Ongoing
|
2021/04 - Current | Exploring the use of environmental DNA to monitor the ichthyofauna and provide data to assist fish stock assessment in the
Atlantic
UMINHO/BID/2021/36
Supervisor
Universidade do Minho Departamento de Biologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/12/01 - Current | Meta-species screening for genetic divergence and phylogeographic reconstruction in Atlantic marine fish species
UI/BD/1509102021
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - Current | DNA-based monitoring of ichthyoplankton for application to fish biodiversity conservation and fisheries management
DFA/BD/6653/2020
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - Current | Optimization of DNA metabarcoding for the early detection and improved monitoring of non-indigenous species (NIS) in Portuguese
coastal ecosystems
UI/BD/150871/2021
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia |
2017/10/01 - 2022/09/06 | Phyllodocida (Annelida, Polychaeta) of the North East Atlantic as model for the investigation of cryptic species
SFRH/BD/131527/2017
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2017 - 2021 | Development of a metabarcoding approach for investigating the coupled dynamics of estuarine meio - and macrobenthic communities
PD/BD/113547/2015
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2016 - 2020 | Monitoring coastal benthic colonization of artificial substrates with the support of DNA metabarcoding approaches
PD/BD/127994/2016
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2016 - 2019 | Metabarcoding of meio- and macrobenthic estuarine communities: performance assessment and implementation in monitoring programmes
SFRH/BPD/109842/2015
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2013/10/01 - 2018 | GENOMIC PHYLOGEOGRAPHY AND DEMOGRAPHIC HISTORY OF THE IBERIAN HONEYBEE (APIS MELLIFERA IBERIENSIS)
SFRH/BD/841952/2012/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2013/03/01 - 2018 | ASSOCIATIONS BETWEEN GENETIC AND COMMUNITY DIVERSITY IN NORTHEAST ATLANTIC ROCKY SHORE ENVIRONMENTS: THE CASE OF THE PERACARIDS
SFRH/BD/865362/2012
Supervisor
Universidade de Aveiro, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/10/01 - 2016 | POPULATION GENOMICS AND LANDSCAPE GENETICS OF THE IBERIAN HONEY BEE (APIS MELLIFERA IBERIENSIS)
FCT/SFRH/BD/686822/2010/PT
Supervisor
Universidade do Minho, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/10/01 - 2016 | MOLECULAR BIODIVERSITY AND ADVANCED MONITORING TOOLS FOR MACROBENTHIC COMMUNITIES OF PORTUGUESE COASTAL ECOSYSTEMS
SFRH/BD/69750/2010/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/01 - 2015 | PHYLOGENY, PHYLOGEOGRAPHY AND ONTOGENY OF THE WORLDWIDE DISTRIBUTED SHRIMP GENUS PLESIONIKA: CONTRASTING MOLECULAR AND MORPHOLOGY-BASED
APPROACHES
SFRH/BPD/63888/2009/PT
Supervisor
Instituto Português do Mar e da Atmosfera, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2009/01/01 - 2015 | MOLECULAR BIODIVERSITY AND META-SPECIES PHYLOGEOGRAPHY OF FISH FROM THE NE ATLANTIC AND MEDITERRANEAN
SFRH/BPD/45246/2008/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2007/07/01 - 2013 | BIODIVERSITY AND EVOLUTION OF BROWN SEAWEEDS FROM PORTUGUESE WATERS AND ADJACENT OCEANOGRAPHIC REGIONS
SFRH/BPD/34246/2006/PT
Supervisor
Universidade dos Açores, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2006/01/01 - 2012 | BIODIVERSIDADE E EVOLUÇÃO MOLECULAR DE CRUSTÁCEOS EM ECOSSISTEMAS BATIAIS DA MARGEM PORTUGUESA
SFRH/BD/25568/2005/PT
Supervisor
Universidade de Aveiro, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2006 - 2007 | EUROFISHCODE - DNA barcodes for species identification of Fish and Shellfish in Europe: implementation and application in
selected case-studies
Researcher
Bangor University, United Kingdom
|
European Commission
Concluded
|
2003 - 2005 | Development of methodologies for monitoring genotoxicity and genotypic diversity in ecosystems of the Portuguese coast
SFRH/BPD/11588/2002
Post-doc Fellow
Instituto do Mar, Portugal
University of Guelph, Canada Texas Tech University, United States |
Fundação para a Ciência e a Tecnologia
Concluded
|
Contract
Designation | Funders | |
---|---|---|
2023/06/01 - Current | eDNAqua-plan: A Plan towards an eDNA reference library and data repository for Aquatic Organisms, navigating Europe towards
the next generation biodiversity monitoring
HORIZON-MISS-2022-OCEAN-01ID101112800
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Horizon 2020
Ongoing
|
2023/01/02 - Current | Blue Bioeconomy Innovation Pact - Vertical Fish
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Agência para a Competitividade e Inovação IP
Ongoing
|
2023/01/01 - Current | Blue Bioeconomy Innovation Pact - Vertical Algae
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Agência para a Competitividade e Inovação IP
Ongoing
|
2019/06/16 - Current | BIOSCAN- Revealing species, their interactions and dynamics
Researcher
University of Guelph, Canada
|
Natural Sciences and Engineering Research Council of Canada
Ongoing
|
2019 - Current | Integrative approach to adaptive radiation in ancient lakes - a case study of Lake Ohrid Gammarus species flock
018/31/B/NZ8/03103
Researcher
Uniwersytet Lódzki, Poland
|
Narodowe Centrum Nauki |
2021/01/01 - 2025/12/31 | Aquatic Research Infrastructure Network
LA/P/0069/2020
Researcher
Universidade de Évora, Portugal
Centro de Ciências do Mar e do Ambiente, Portugal Universidade NOVA de Lisboa, Portugal FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal Instituto Universitário de Ciências Psicológicas Sociais e da Vida, Portugal Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal Instituto Politécnico de Leiria, Portugal Universidade do Minho, Portugal Universidade do Algarve, Portugal Universidade de Coimbra, Portugal Universidade de Lisboa Faculdade de Ciências, Portugal Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação, Portugal Associação para a Inovação e Desenvolvimento da FCT, Portugal Centro de Investigação Marinha e Ambiental, Portugal |
Fundação para a Ciência e a Tecnologia
Ongoing
|
2022 - 2025/01/19 | FISH-DNA-MONITOR: Supporting monitoring and management of fisheries resources in Guinea-Bissau through capacity-building on
cutting-edge DNA- based approaches
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Aga Khan Development Network Fundação para a Ciência e a Tecnologia Ongoing
|
2020/08/24 - 2024/04/23 | A-FISH-DNA-SCAN: Cutting-edge DNA-based approaches for improved monitoring and management of fisheries resources along Magellan-Elcano´s
Atlantic route
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal Instituto Português do Mar e da Atmosfera, Portugal Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal Centro de Ciências do Mar, Portugal |
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - 2023/09/30 | ATLANTIDA - Platform for the monitoring of the North Atlantic ocean and tools for the sustainable exploitation of the marine
resources
Researcher
Universidade do Minho, Portugal
|
Comissao de Coordenacao e Desenvolvimento Regional do Norte
Concluded
|
2021/10/15 - 2023/06/30 | River2Ocean: Socio-ecological and biotechnological solutions for the conservation and valorisation of aquatic biodiversity
in the Minho Region
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Comissao de Coordenacao e Desenvolvimento Regional do Norte
Concluded
|
2020/04/01 - 2023/06/30 | K2D: Knowledge and Data from the Deep to Space
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2018/10/01 - 2021/09/30 | NIS-DNA: Early detection and monitoring of non-indigenous species (NIS) in coastal ecosystems based on high-throughput sequencing
tools
Researcher
Universidade do Minho, Portugal
Fundação Gaspar Frutuoso, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2017 - 2020 | (NEXT-SEA) Next generation monitoring of coastal ecosystems in a scenario of global change
Researcher
Comissao de Coordenacao e Desenvolvimento Regional do Norte, Portugal
|
Concluded
|
2016/04 - 2020 | DNAqua-Net: Developing new genetic tools for bio-assessment of aquatic ecosystems in Europe
Researcher
Universität Duisburg-Essen, Germany
|
European Cooperation in Science and Technology
Concluded
|
2019/01/01 - 2019/12/31 | CENTRO DE BIOLOGIA MOLECULAR E AMBIENTAL
UID/BIA/04050/2019
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2012/03/15 - 2015/09/14 | NANOECOTOX-Impacts of metal nanoparticles to aquatic ecosystems: from community responses to cellular targets
PTDC/AAC-AMB/121650/2010
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal Universidade do Algarve, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/04/04 - 2014/10/02 | Benthic Estuarine Barcode (BEstBarcode): Development and application of massively paralelized sequencing for monitoring of
estuarine macrobenthic communities
PTDC/MAR/113435/2009
Principal investigator
Universidade do Minho, Portugal
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/04/01 - 2014/09/30 | DiverseShores - Testing associations between genetic and community diversity in European rocky shore environments
PTDC/BIA-BIC/114526/2009
Researcher
Universidade de Aveiro, Portugal
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/01/01 - 2013/12/31 | Projecto Estratégico - UI 4050 - 2011-2012
PEst-C/BIA/UI4050/2011
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/22 - 2013/09/30 | Patterns and processes of (neutral and adaptive) variation in the honey bee (Apis mellifera iberiensis) hybrid zone of the
Iberian Peninsula: a population genetics approach integrating population genomics and landscape genetics
PTDC/BIA-BEC/099640/2008
Researcher
Instituto Politécnico de Bragança, Portugal
Centro de Investigação de Montanha, Portugal Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/17 - 2013/09/15 | METAFISHCODE: Fish genetic diversity and meta-species phylogeography at global and regional scales: implications for fisheries
management
PTDC/MAR/101795/2008
Principal investigator
Universidade do Minho, Portugal
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal Instituto Português do Mar e da Atmosfera, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008/11/01 - 2012/04/30 | LusoMarBoL: Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and
investigating phylogeographic patterns
PTDC/MAR/69892/2006
Principal investigator
Universidade do Minho, Portugal
Universidade de Aveiro, Portugal Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal Universidade dos Açores, Portugal Instituto Português do Mar e da Atmosfera, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008/11/01 - 2012/04/30 | Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and investigating
phylogeographic patterns
PTDC/MAR/69892/2006
Universidade do Minho, Portugal
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal Instituto Português do Mar e da Atmosfera, Portugal Universidade de Aveiro, Portugal Universidade dos Açores, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008 - 2011 | LusoAquaBarcode: Implementing DNA barcoding into aquatic biodiversity research in Portugal and priming new macrobenthos monitoring
tools
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
European Commission |
2002/04/01 - 2005/12/31 | Integration of molecular and physiological responses to contamination. Applicability to coastal environment's biomonitoring.
POCTI/BSE/41967/2001
PhD Student Fellow
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2000/01/01 - 2003/12/31 | Genetic characterization and genetic ecotoxicology of a marine amphipod
POCTI/BIA/10225/2002
PhD Student Fellow
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
1998/03/01 - 2002/02/28 | DOS ORGANISMOS ÀS POPULAÇÕES: TESTES DE TOXICIDADE SEDIMENTAR VERSUS POPULAÇÕES NATURAIS. UTILIZAÇÃO DE ANFÍPODES ESTUARINOS
PRAXIS XXI/BD/11575/97
PhD Student Fellow
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
1994/10/01 - 1996/09/30 | GAMMARUS LOCUSTA ANPHIPODA COMO ORGANISMO TESTE EM ENSAIOS DE TOXICIDADE DE COBRE. METODOLOGIAS PARA MANUTENÇÃO DA ESPÉCIE
EM LABORATÁRIO
PRAXIS XXI/BM/2390/94
Universidade de Lisboa Faculdade de Ciências, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
Other
Designation | Funders | |
---|---|---|
2022/09/09 - Current | DNA-based approaches for fisheries monitoring
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Ongoing
|
Outputs
Publications
Book chapter |
|
Conference paper |
|
Edited book |
|
Journal article |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2024/11/27 | Boosting marine biodiversity discovery and monitoring through environmental DNA metabarcoding | The 5th Annual Meeting International Joint Research Center of Marine Biology
CCMAR/ University of Saint Joseph, Macau, China (Macau, China)
|
2023/07/19 | Overview of (e)DNA (meta)barcoding and BIOSCAN / BIOSCAN-Europe | Biodiversa+ Workshops on Monitoring Non-Indigenous Species Through Introduction sites
Central Fisheries Research Institute (Yomra, Trabzon, Turkey)
|
2023/07/12 | DNA barcodes in the discovery and monitoring of marine biodiversity | ATLANTIDA - Platform for the monitoring of the North Atlantic Ocean and tools for the sustainable exploitation of the marine
resources – Final event
CIIMAR (Matosinhos, Portugal)
|
2023/07/07 | Usefulness and potential of (e)DNA (meta)barcoding in marine biodiversity monitoring and management | Encontro Ciência 2023 da Fundação para a Ciência e Tecnologia (FCT)
Universidade de Aveiro (Aveiro, Portugal)
|
2023/06/30 | Challenges for sampling eDNA from open ocean, deep sea and the seabed. | K2D- Knowledge from deep to space- final event
DSTelecom (Braga, Portugal)
|
2022/12/16 | Insights into biodiversity and evolution after 20 years of DNA barcoding, with a focus on marine life | XVIII Encontro Nacional de Biologia Evolutiva (ENBE)
University of Minho (Braga, Portugal)
|
2022/06/09 | XI Brazilian Crustacean Congress / The Crustacean Society Summer (TCS) meeting / Amphipoda Symposium (online event) | New DNA barcoding-driven perspectives on the diversity and evolution of marine Peracarida (Crustacea): the case of the Macaronesia’s
hotspot
Universidade Estadual Paulista (UNESP) (São Paulo, Brazil)
|
2021/03/09 | Venturing into auditing of reference libraries: from the hackathon on marine invertebrates to sorting with BAGS | First DNAQUA International Conference
Costa Action DNAqua-Net / INRAE, Carrtel, France, Online Event (Carrtel, France)
|
2018/07 | Aquatic macroinvertebrates diversity and evolution: some novel perspectives after 15 years of DNA barcoding | 3rd Central European Symposium for Aquatic Macroinvertebrate Research (3rd CESAMIR)
University of Lodz (Lodz, Poland)
|
2017/01 | Appraisal and prospects of DNA barcoding marine life of Portugal: from Sanger to high-throughput sequencing. | CIIMAR Oceanus Seminar Series
CIIMAR - Interdisciplinary Centre of Marine and Environmental Research (Porto, Portugal)
|
2012 | The contribution of DNA barcoding to marine life taxonomy. | First Iberian Meeting on Marine Taxonomy
University of Seville (Seville, Spain)
|
2012 | Introduction to DNA barcoding. | Workshop in Marine DNA barcoding
Universidade dos Açores (Ponta Delgada, Portugal)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2023/01/01 - 2023/09/30 | ATLANTIDA: Platform for the monitoring of the North Atlantic Ocean and tools for the sustainable exploitation of marine resources
Supervisor of Luara Aparecida Simões
|
Post-doctoral fellow (Other)
Universidade do Minho, Portugal
|
2023 - 2023 | DNA metabarcoding monitoring of zooplankton for the detection of non-indigenous species (NIS): a seasonal study in a recreational
marina of the northwest of Portugal
Co-supervisor
|
Biodiversidade, Ecologia e Alterações Globais (Master)
Universidade do Minho, Portugal
|
2023 - 2023 | Amostragem Biológica em Mar Profundo
Co-supervisor
|
Engenharia Física (Master)
Universidade do Minho, Portugal
|
2019 - 2022/09/06 | Phyllodocida (Annelida, Polychaeta) of the North East Atlantic as a model for the investigation of cryptic species
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2022 - 2022 | DNA metabarcoding for the early detection and improved monitoring of non-indigenous species (NIS) in Portuguese coastal ecosystems
Co-supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2022 - 2022 | Potential of Atlantic codfish (Gadus morhua) skin collagen and derivatives on skincare
Co-supervisor
|
Bioquímica Aplicada (Master)
Universidade do Minho, Portugal
|
2022 - 2022 | Otimização de ferramentas moleculares para a monitorização de espécies não indígenas em regiões costeiras do Norte de Portugal
Co-supervisor
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2017 - 2021/03/31 | Monitoring coastal benthic colonization of artificial substrates with the support of DNA metabarcoding approaches
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | Exploring the use of environmental DNA to monitor the ichthyofauna and provide data to assist fish stock assessment in the
Atlantic
Supervisor
|
Biologia (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | DNA-based monitoring of ichthyoplankton for application to fish biodiversity conservation and fisheries management
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | Meta-species screening for genetic divergence and phylogeographic reconstruction in Atlantic Marine fish species
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2019/11 - 2020/07 | Ecological network analyses of marine communities from Portuguese coastal ecosystems, with particular focus on data derived
from high-throughput sequencing
Supervisor
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2020 - 2020 | Improving auditing and annotation of DNA barcode reference libraries of animal COI sequences for Molecular Ecology applications
Supervisor
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2018 - 2019 | DNA barcoding of the genus Laeonereis (Phyllodocida: Nereididae): a recent approach for an old impasse
Supervisor of Bruno Rodrigues Sampieri
|
Post-doctoral fellow supported by FAPESP, São Paulo, Brazil (Other) |
2016 - 2019 | Metabarcoding of meio- and macrobenthic estuarine communities: performance assessment and implementation in monitoring programmes
Supervisor of Sofia Alexandra Ferreira Duarte
|
Post-Doctoral Fellowship SFRH/BPD/109842/2015 (Other)
Universidade do Minho, Portugal
|
2017 - 2017 | Development of metabarcoding approaches for investigating temporal and spatial dynamics of meiobenthic communities in estuarine
ecosystem
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2012 - 2017 | Biodiversity and evolution of the coastal peracaridean fauna of Macaronesia and Northeast Atlantic
Co-supervisor of Pedro Emanuel Ferreira dos Reis Vieira
|
Universidade de Aveiro, Portugal
|
2016 - 2016 | Employment of whole genome resequencing to reveal the evolutionary history and to develop molecular tools for Western European
honey bees (Apis mellifera subspecies)
Co-supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2016 - 2016 | Molecular biodiversity and advanced monitoring tools for macrobenthic communities of Portuguese coastal ecosystems
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2015 - 2016 | Biblioteca de referência de DNA barcodes de anfípodes (Crustacea: Amphipoda) da costa Portuguesa
Supervisor of Ilisa Daniela Costa Antunes
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2016 | Development of a biomonitoring tool for estuarine macrobenthic communities based on DNA barcodes and next generation sequencing
Supervisor of Claudia Hollatz
|
Pós-Doctoral fellow supported by the programme "Ciência sem Fronteiras (Capes, Brasil)" (Other)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2014 - 2015 | DNA barcodes de peixes marinhos da Europa: compilação de uma biblioteca de referência validada e investigação de padrões de
divergência genética
Supervisor of Luís Manuel Coelho Oliveira
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2015 | Biblioteca de referência de DNA barcodes de bivalves (Mollusca: Bivalvia) e gastrópodes (Mollusca: Gastropoda) da costa Portuguesa.
Supervisor of Ana Paula Peixoto Vilela
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2015 | Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities
Supervisor of Bárbara Daniela da Rocha Leite
|
Genética Molecular (Master)
Universidade do Minho, Portugal
|
2011 - 2015 | Population genomics and landscape genetics of the Iberian honey bee (Apis mellifera iberiensis)
Co-supervisor of Julio César Chávez Galarza
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2013 - 2014 | Construção de uma biblioteca de referência de DNA barcodes para Isópodes marinhos (Crustacea: Isopoda) de Portugal e da Macaronésia
Supervisor of Nuno Miguel Araújo Gomes
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2012 - 2013 | Compilação de uma bibliografia de referência de DNA barcodes para peixes marinhos de Portugal e estudo filogeográfico da espécie
Zeus faber
Supervisor of Cláudia Soraia Lopes Castro
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2009/01 - 2012/04 | Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and investigating
phylogeographic patterns
Supervisor of Luísa Maria Sousa Borges
|
Post-doctoral fellow in the scope of the FCT funded project "LusoMarBoL" PTDC/MAR/69892/2006 (Other)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2006 - 2012 | Biodiversity and molecular evolution of Malacostraca
Co-supervisor of Joana Rafael Matzen Neves Da Silva
|
Universidade de Aveiro, Portugal
|
Event organisation
Event name Type of event (Role) |
Institution / Organization | |
---|---|---|
2024/07/31 - 2024/08/02 | Final International Workshop of the project A-FISH-DNA-SCAN, FCT-funded project concerning DNA-based monitroing of marine
fish species.
At this meeting the results of the project A-FISH-DNA-SCAN were presented through a series of seminars at Universidade Técnica
do Atlântico, Cabo Verde, including also contributions from local researchers. Seminars were open to the public and were attendedd
by local media
Participants from Portugal, Cabo Verde, Brazil and Guinea-Bissau were present, including Academia and governmental fisheries
research agency. (2024/07/31 - 2024/08/02)
Workshop (President of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2023/10/19 - 2023/10/20 | IV International Meeting of the Portuguese Society of Genetics, October 19-20, Braga, Portugal. (2023)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2022/12/15 - 2022/12/16 | XVIII Encontro Nacional de Biologia Evolutiva (ENBE), December 15-16, 2022, Braga, Portugal. (2022/12/15 - 2022/12/16)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2019/09 - 2019/09 | XXth SIEBM: 20th Iberian Symposium on Marine Biology Studies
(2019/09 - 2019/09)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2019 - 2019 | Workshop "Hackathon on revision of reference libraries of Marine Invertebrates": co-Coordinator (2019/06/16 - 2019/06/16)
Workshop (Co-organisor)
|
Norges teknisk-naturvitenskapelige universitet, Norway |
2019 - 2019 | Mini-workshop on Barcode of Life Datasystems (BOLD) (2019 - 2019)
Workshop (Member of the Organising Committee)
|
Université Bourgogne Franche-Comté, France |
2018/01/24 - 2018/01/26 | DNAqua-Net workshop: Gap analyses workshop and WG1 meeting of the COST Action DNAqua-Net ref. CA 15219 (2018/01/24 - 2018/01/26)
Workshop (President of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2016 - 2016 | 32nd Symposium of the European Society of Nematologists (2016 - 2016)
Symposium (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2015/09 - 2015/09 | 16th ICA: 16th International Colloquium on Amphipoda
(2015/09/07 - 2015/09/11)
Conference (President of the Organising Committee)
|
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2012 - 2012 | NGS in Marine Genomics: Current challenges and future directions. (2012/09 - 2012/09)
Symposium (Co-organisor)
|
Universidade de Vigo, Spain |
2012 - 2012 | XVIth Congress of the Iberian Society of Limnology. (2012 - 2012)
Congress (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2010/06/02 - 2010/06/04 | ECBOL2: 2nd Conference of the European Consortium for the Barcode of Life: 2010 International Year of Biodiversity (2010/06/02 - 2010/06/04)
Conference (President of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2008 - 2008 | FISH-BOL workshop: 1st Workshop of the European Regional Working Group of the Fish Barcode of Life Initiative. (2008 - 2008)
Workshop (Co-organisor)
|
Università degli Studi di Palermo, Italy |
Jury of academic degree
Topic Role |
Candidate name (Type of degree) Institution / Organization |
|
---|---|---|
2025/02/22 | Monitoring and evaluation of the deep-sea through environmental genetics
President of the jury
|
Cristina Claver de Palacio (PhD)
Universidad del País Vasco, Spain
|
2024/07/09 | Insights on the evolution of grayling (Thymallinae, Salmonidae)
(Thesis) Main arguer
|
Giulia Secci (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
|
2022/06/09 | Phyllodocida (Annelida, Polychaeta) ofthe North East Atlantic as a model forthe investigation of cryptic species
Supervisor
|
Marcos André Machado Lima Teixeira (PhD)
Universidade do Minho, Portugal
|
2020/12/07 | VAGILE FOULING: BIOGEOGRAPHY AND COMMUNITY DRIVERS OF AN UNDERSTUDIED COMMUNITY OF OVERLOOKED TAXA
(Thesis) Main arguer
|
Andrea Desiderato (PhD)
Universidade Federal do Paraná, Brazil
|
2020/11/23 | Impacts of the invasive species Corbicula fluminea on freswater mussels
(Thesis) Arguer
|
Ana Vanessa Pinto Modesto Bento (PhD)
Universidade do Minho, Portugal
|
2020 | Under the surface: combining ecological and evolutionary analysis to conserve freshwater mussels in the Iberian Peninsula
(Thesis) Main arguer
|
Manuel Peixoto de Magalhães Lopes Lima (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
|
2018/04/12 | Sistemática molecular e historia evolutiva de peces marinos de profundidad del Océano Atlántico y del Mar Mediterráneo
(Thesis) Main arguer
|
David Barros Garcia (PhD)
Universidade de Vigo, Spain
|
2017/10/31 | Biodiversity and evolution of the coastal peracaridean fauna from Macaronesia and Northeast Atlantic
Supervisor
|
Pedro Emanuel Ferreira Dos Reis Vieira (PhD)
Universidade de Aveiro, Portugal
|
2017/07 | Molecular clocks and rates of evolution in marine invertebrates
(Thesis) Main arguer
|
Tzitziki del Rosario Loeza Quintana (PhD)
University of Guelph, Canada
|
2017 | Invasive species as resource subsidies: functional importance
(Thesis) Arguer
|
Adriana Araújo Novais (PhD)
Universidade do Minho, Portugal
|
2017 | The microbiome of cetaceans as a health status marker
(Thesis) Main arguer
|
Helena Maria Araújo Rodrigues (Master)
Universidade do Minho, Portugal
|
2016 | Propagação clonal, conectividade e estrutura genética em populações de Paramuricea clavata do Atlântico e Mediterrâneo
(Thesis) Main arguer
|
Joanna Pilczynska (PhD)
Universidade de Aveiro, Portugal
|
2014 | Macrofaunal biodiversity of bathyal habitats at the Moroccan Carbonate Province (Gulf of Cadiz, NE Atlantic)
(Thesis) Main arguer
|
JOANA FILIPA MONTEIRO CASAIS (Master)
Universidade de Aveiro, Portugal
|
2013/06 | Responses of aquatic decomposers to nutrient availability in a warming scenario
(Thesis) Arguer
|
Isabel Rodrigues Fernandes (PhD)
Universidade do Minho, Portugal
|
2012 | Filogeografia das lampreias da Europa Ocidental: contributos para a compreensão dos seus padrões de especiação.
(Thesis) Main arguer
|
Ana Martins Pereira (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
|
2012 | Taxonomy, systematics, morphological and molecular phylogeny of the order tanaidacea (crustacea: peracarida), from the Antarctic,
atlantic and pacific oceans
(Thesis) Main arguer
|
Catarina de Lourdes Araújo Silva (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
|
2009 | Genetic and morphological diversity of the genus Lampetra (Petromyzontidae) in Europe
(Thesis) Main arguer
|
Catarina Sofia Pereira Mateus (PhD)
Universidade de Évora Instituto de Investigação e Formação Avançada, Portugal
|
Committee member
Activity description Role |
Institution / Organization | |
---|---|---|
2016 - Current | DNAqua-Net Portugal Delegate and Management Committee member of the COST Action "DNAqua-Net: Developing new genetic tools
for bio- assessment of aquatic ecosystems in Europe" http://dnaqua.net
Member
|
Universität Duisburg-Essen, Germany |
2008 - Current | iBOL: Portugal Delegate in the International Barcode of Life (iBOL) consortium: http://www.ibol.org
Member
|
University of Guelph, Canada |
Conference scientific committee
Conference name | Conference host | |
---|---|---|
2024/09/02 - 2025/09/06 | 9th International Barcode of Life Conference | Vale Institute of Technology |
2022/06/20 - 2022/06/23 | IX Iberian Congress of Ichthyology (SIBIC 2022) | CIIMAR, University of Porto |
2020/12/09 - 2020/12/11 | XIX Encontro Nacional de Ecologia (Sociedade Portuguesa de Ecologia – SPECO) | Instituto Politécnico de Viana do Castelo (IPVC) |
2019/08 - 2019/08 | 18th International Colloquium on Amphipoda | University of Burgundy, Dijon, France |
2019/06 - 2019/06 | 8th International Barcode of Life Conference | University of Trondheim, Trondheim, Norway |
2017 - 2017 | 17th International Colloquium on Amphipoda | University of Palermo, Trapani, Italy |
2017 - 2017 | 7th International Barcode of Life Conference | University of Johannesburg, Kruger, South Africa |
2016 - 2016 | CdM ISC’16: Campus do Mar International Scientific Conference 2016 | Universidade de Trás-os-Montes e Alto Douro (UTAD) |
2015/09 - 2015/09 | 16th International Colloquium on Amphipoda | University of Aveiro, Portugal; University of Minho, Portugal |
2015 - 2015 | 6th International Barcode of Life Conference | University of Guelph, ON, Canada |
2013 - 2013 | 15th International Colloquium on Amphipoda | University of Lodz, Poland |
Course / Discipline taught
Academic session | Degree Subject (Type) | Institution / Organization | |
---|---|---|---|
2025/03 - 2025/03 | DNA barcoding - from sequences to species / ForBio Research School on Biosystematics | ForBio Research School on Biosystematics (Postgraduate Certificate) (Postgraduate Certificate) | Norges teknisk-naturvitenskapelige universitet, Norway |
2019/10 - 2019/10 | DNA barcoding - from sequences to species / ForBio Research School on Biosystematics | ForBio Research School on Biosystematics (Postgraduate Certificate) | Norges teknisk-naturvitenskapelige universitet, Norway |
2018 - 2018 | Erasmus+ exchange Invited lecture | Erasmus+ exchange Invited lecture (Postgraduate Certificate) | Universidade de Vigo, Spain |
Journal scientific committee
Journal title (ISSN) | Publisher | |
---|---|---|
2016 - Current | Metabarcoding and Metagenomics (2534-9708) | Pensoft Publishers |
2014 - 2024 | Scientific Reports (2045-2322) | Springer Science and Business Media LLC |
Other jury / evaluation
Activity description | Institution / Organization | |
---|---|---|
2019 - Current | Referee for the PhD thesis of Chiara Abbatista titled "Biogeographic patterns of Mediterranean Amphipods associated with Posidonia oceanic meadows" | Università degli Studi della Tuscia, Italy |
2019 - 2020 | Referee for the PhD thesis of Luca Vecchioni titled "Systematics and phylogeography of the genus Tigriopus (Copepoda, Harpacticoida, Harpacticidae) in the basin of the Mediterranean Sea" | Università degli Studi di Palermo, Italy |
Distinctions
Award
2022 | Prize for Recognition of the Impact of Scientific Research
Universidade do Minho Escola de Ciências, Portugal
|
2020 | Prize for Scientific Research and Technological Development
Fundação para a Ciência e a Tecnologia, Portugal
|