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Identification

Personal identification

Full name
José Carlos de Carvalho Rodrigues

Citation names

  • Rodrigues, Jose

Author identifiers

Ciência ID
5F11-E3FB-372F
ORCID iD
0000-0002-4279-6188

Languages

Language Speaking Reading Writing Listening Peer-review
English Intermediate (B1) Advanced (C1) Intermediate (B1) Intermediate (B1)
French Intermediate (B1) Advanced (C1) Beginner (A1) Intermediate (B1)
Spanish; Castilian Beginner (A1) Intermediate (B1) Beginner (A1) Beginner (A1)
Education
Degree Classification
2007
Concluded
 Habilitation (Título de Habilitação de Coordenação Científica)
Instituto de Investigação Científica Tropical, Portugal
"Aplicação e desenvolvimento de métodos expeditos por espectroscopia de infravermelho próximo e análise multivariada. Aplicações agro-florestais" (THESIS/DISSERTATION)
 Aprovado por unanimidade
1998
Concluded
 PhD (Doutoramento)
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
"Caracterização da composição química da madeira de Eucalyptus globulus Labill. por espectroscopia de infravermelho e pirólise analítica" (THESIS/DISSERTATION)
 Aprovado por unanimidade
Affiliation

Science

Category
Host institution 		Employer
2015/08/01 - Current Auxiliary Researcher (Research) Universidade de Lisboa Instituto Superior de Agronomia, Portugal
1999/05/01 - 2015/07/31 Auxiliary Researcher (Research) Instituto de Investigação Científica Tropical, Portugal
Instituto de Investigação Científica Tropical, Portugal
1992/07/14 - 1999/04/30 Research Assistant (Research) Instituto de Investigação Científica Tropical, Portugal
Instituto de Investigação Científica Tropical, Portugal
1988/10/26 - 1992/07/13 Research Trainee (Research) Instituto de Investigação Científica Tropical, Portugal
Instituto de Investigação Científica Tropical, Portugal

Positions / Appointments

Category
Host institution 		Employer
2007/05/02 - 2012/01/30 Coordenador do Centro de Florestas e Produtos Florestais do IICT Instituto de Investigação Científica Tropical, Portugal
Instituto de Investigação Científica Tropical, Portugal
Projects

Grant

Designation Funders
2024/09 - 2028/02 Forest surveillance with artificial intelligence and digital technologies - FORSAID
101134200
 European Commission
2021/01 - 2025/12 Laboratório para a Sustentabilidade do Uso da Terra e dos Serviços dos Ecossistemas
168229UID
 Fundação para a Ciência e a Tecnologia
2019/01 - 2019/12 Centro de Estudos Florestais
154627UID
 Fundação para a Ciência e a Tecnologia

Contract

Designation Funders
2016/09 - 2027/12 Selección acelerada de Eucalyptus para bioenergía de los programas de mejoramiento forestal del MERCOSUR
BGUE-B2016-21.025102-C8-DEVCO
Researcher
European Commission
Concluded
2022/07/01 - 2025/12/31 RN21 - Inovação na Fileira da Resina Natural para Reforço da Bio economia Nacional. Projecto integrado RN21
RN21
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
Ongoing
2021/10/01 - 2025/12/31 PII.1.4 Avaliação digital da madeira à entrada da fábrica
PII.1.4
Researcher
Universidade de Lisboa Centro de Estudos Florestais, Portugal
2021/01/01 - 2025/12/31 Laboratory for Sustainable Land Use and Ecosystem Services
LA/P/0092/2020
10.54499/LA/P/0092/2020
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal

Universidade de Coimbra Centre for Functional Ecology - Science for People & the Planet, Portugal

Universidade de Lisboa Instituto de Geografia e Ordenamento do Território, Portugal

Universidade de Coimbra, Portugal

Universidade de Lisboa Instituto de Saúde Ambiental, Portugal

Universidade de Lisboa Centro de Estudos Geográficos, Portugal

Universidade de Lisboa Centro de Investigação em Agronomia Alimentos Ambiente e Paisagem, Portugal

Associação para a Investigação e Desenvolvimento da Faculdade de Medicina, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019/01/01 - 2019/12/31 Forest Research Centre
UID/AGR/00239/2019
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2016/06/01 - 2019/12/31 ProTimber. Probabilistic Assessment of Existing Timber Structures
PTDC/ECM-EST/1072/2014
Researcher
Laboratório Nacional de Engenharia Civil, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Instituto para a Sustentabilidade e Inovação em Estruturas de Engenharia, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2016/06/01 - 2019/12/31 Probabilistic Assessment of Existing Timber Structures
PTDC/ECM-EST/1072/2014
Laboratório Nacional de Engenharia Civil, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Instituto para a Sustentabilidade e Inovação em Estruturas de Engenharia, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2013/05/01 - 2016/12/31 A holistic approach to assess phenotype-dependent variations in chemical composition of softwoods on the tree-ring level
RECI/AGR-TEC/0493/2012
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

University of Hawai'i at Manoa, United States

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2013/05 - 2016/04 A holistic approach to assess phenotype-dependent variations in chemical composition of softwoods on the tree-ring level
131208
 Fundação para a Ciência e a Tecnologia, I.P.
2011/11 - 2016/04 Designing Trees for the future
284181
 European Commission
2011/04/01 - 2015/03/31 TREEFORJOULES - Improving eucalypt and poplar wood properties for bioenergy
P-KBBE/AGR-GPL/0001/2010
Instituto de Biologia Experimental e Tecnológica, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/04 - 2015/03 TREEFORJOULES - Improving eucalypt and poplar wood properties for bioenergy
116475
FP7-INFRASTRUCTURES-2011-1-284181
Researcher
European Commission
Concluded
2011/04/01 - 2014/09/30 Scots pine in Portugal: the “Southwest end” or just “the end”?
PTDC/AGR-CFL/110988/2009
Instituto de Biotecnologia e Bioengenharia, Portugal

Universidade de Trás-os-Montes e Alto Douro, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal

Universidade de Trás-os-Montes e Alto Douro Centro de Investigação e de Tecnologias Agro-Ambientais e Biologicas, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/04 - 2014/09 Scots pine in Portugal: the “Southwest end” or just “the end”?
110988
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2011/01/01 - 2013/12/31 Strategic Project - UI 239 - 2011-2012
PEst-OE/AGR/UI0239/2011
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/01/01 - 2013/12/31 Strategic Project - UI 239 - 2011-2012
PEst-OE/AGR/UI0239/2011
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/03/01 - 2013/08/31 Did you ask for something small? The microRNAs power in a Eucalyptus tension world! (the microEGo project)
PTDC/AGR-GPL/098179/2008
Instituto de Biologia Experimental e Tecnológica, Portugal

Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/03 - 2013/08 Did you ask for something small? The microRNAs power in a Eucalyptus tension world! (the microEGo project)
98179
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2010/01/01 - 2013/06/30 Genomics of Cork Formation: an integrated approach of cork quality
PTDC/AGR-GPL/101785/2008
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal

Instituto de Biologia Experimental e Tecnológica, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/01 - 2013/06 Genomics of Cork Formation: an integrated approach of cork quality
101785
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2009/01/01 - 2012/06/30 The Macromolecular Structure of Suberin
PTDC/QUI/70589/2006
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal

Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2009/01 - 2012/06 The Macromolecular Structure of Suberin
70589
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2008/01/02 - 2011/12/31 Safety evaluation of timber structures through non-destructive methods and stochastic analysis
PTDC/ECM/66527/2006
Laboratório Nacional de Engenharia Civil, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2008/01 - 2011/12 Safety evaluation of timber structures through non-destructive methods and stochastic analysis
66527
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2007/11/01 - 2011/10/31 Effects of Air Pollution and Tree Sanitary Status in Pollen Grain Production, Morphology and Identification
PTDC/AMB/64929/2006
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal

Câmara Municipal de Lisboa, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2007/11 - 2011/10 Effects of Air Pollution and Tree Sanitary Status in Pollen Grain Production, Morphology and Identification
64929
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2007/06/01 - 2011/05/31 Phytopathological applications of NIR spectroscopy. - Detection and identification of rice pests and coffee leaf rust as case studies.
PTDC/AGR-AAM/68939/2006
Universidade de Lisboa Centro de Estudos Florestais, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2007/06 - 2011/05 Phytopathological applications of NIR spectroscopy. - Detection and identification of rice pests and coffee leaf rust as case studies.
68939
Principal investigator
Fundação para a Ciência e a Tecnologia, I.P.
2007/05/01 - 2010/12/31 Calibration of NIR to assess lignin of soft - and hardwood to investigate the within- and between-tree variation of the lignin composition and content, and its influence on the pulping process
PTDC/AGR-CFL/72606/2006
Universidade de Lisboa Centro de Estudos Florestais, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2007/05 - 2010/12 Calibration of NIR to assess lignin of soft - and hardwood to investigate the within- and between-tree variation of the lignin composition and content, and its influence on the pulping process
72606
PTDC/AGR-CFL/72606/2006
Principal investigator
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
2009/10/01 - 2010/05/31 TransCorkQ - Transcriptomic analysis of cork quality and cambial differentiation in Quercus suber
SOBREIRO/0015/2009
Instituto de Biologia Experimental e Tecnológica, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Instituto de Investigação Científica Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2009/10 - 2010/05 TransCorkQ - Transcriptomic analysis of cork quality and cambial differentiation in Quercus suber
109234
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2007/01 - 2008/11 Molecular Markers for Portuguese pine wood quality
82179
56658
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2005/06/01 - 2007/12/31 Molecular Markers for Portuguese pine wood quality
POCI/AGR/56658/2004
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica António Xavier, Portugal

Instituto de Investigação Científica Tropical, Portugal

Universidade de Trás-os-Montes e Alto Douro, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Book
  1. Sousa-Correia, C.M.; Abreu, J.M.; Ferreira-Dias, S.; Rodrigues, J.C.; Alves, A.; Maxted, N.; Ford-Lloyd, B.V.. Linking conservation with sustainable use: Quercus ilex subsp. rotundifolia (lam) o. schwarz in traditional agro-sylvo-pastoral systems in Southern Portugal. 2007.
Conference paper
  1. Perez, D.D.S.; Guillemain, A.; Chantre, G.; Alazard, P.; Alves, A.; Rodrigues, J.C.; Rozenberg, P.; Plomion, C.; Robin, E.. "Improvement of wood, pulp and paper quality of maritime pine (Pinus pinaster Ait) by combining rapid assessment techniques and genetics". 2005.
  2. Da Silva Perez, D.; Chantre, G.; Rodrigues, J.C.; Plomion, C.; Robin, E.. "Wood chemical composition and kraft pulping performance of native maritime pine from different origins". 2005.
  3. Chantre, G.; Thieule, J.-M.; Rodrigues, J.C.; Guillemain, A.. "Application of near infrared spectroscopy to the prediction and the analysis of the variability of the wood papermaking potential within maritime pine (pinus pinaster): Pulping yield, chemical wood components and paper properties". 2001.
Journal article
  1. Natalia Cristina Aguirre; Pamela Victoria Villalba; Martín Nahuel García; Carla Valeria Filippi; Juan Gabriel Rivas; María Carolina Martínez; Cintia Vanesa Acuña; et al. "Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden)". Frontiers in Genetics (2024): http://dx.doi.org/10.3389/fgene.2024.1361418.
    10.3389/fgene.2024.1361418
  2. Andriambelo Radonirina Razafimahatratra; Tahiana Ramananantoandro; Sophie Nourrissier-Mountou; Chrissy Garel Makouanzi Ekomono; José Carlos Rodrigues; Zo Elia Mevanarivo; Gilles Chaix. "Multispecies, multisite, multi-age PLS regression models of chemical properties of eucalypts wood using Fourier Transformed near-Infrared (FT-NIR) spectroscopy". Journal of Wood Chemistry and Technology (2022): https://doi.org/10.1080/02773813.2022.2115073.
    10.1080/02773813.2022.2115073
  3. Ana Alves; José C. Rodrigues. "Correlation between lignin content and syringyl-to-guaiacyl (S/G) ratio of Eucalyptus globulus wood". Holzforschung 0 0 (2022): https://doi.org/10.1515/hf-2021-0119.
    10.1515/hf-2021-0119
  4. R. Simões; A. Alves; P. S. Pathauer; D. A. Palazzini; S. N. Marcuci-Poltri; J. Rodrigues. "Prediction of the extractives content of Eucalyptus globulus wood using NIR-based PLS-R models. Influence of spectral range and preprocessing on the percentage of outliers detected". Journal of Wood Chemistry and Technology (2022): 1-9. https://doi.org/10.1080/02773813.2022.2096072.
    10.1080/02773813.2022.2096072
  5. Alves, Ana; Graca, Jose; Rodrigues, Jose. "Analytical Pyrolysis as a Tool to Assess Residual Lignin Content and Structure in Maritime Pine High-Yield Pulp". Forests (2022): https://publons.com/wos-op/publon/56212114/.
    10.3390/F13122169
  6. Alves, A.; Cisneros, E. F.; Balmelli, G.; Poltri, S. N. Marcucci; Rodrigues, J.. "Assessment of eucalypts wood lignin content by analytical pyrolysis, comparison with Klason and total lignin contents". Journal of Wood Chemistry and Technology 41 6 (2021): 229-235. http://dx.doi.org/10.1080/02773813.2021.1986071.
    10.1080/02773813.2021.1986071
  7. Palanti, Sabrina; Alves, Ana; Rodrigues, José; Danti, Roberto. "Determination of extractive content in Cupressus sempervirens wood through a NIRS-PLSR model and its correlation with durability". International Biodeterioration & Biodegradation 162 (2021): 105247. http://dx.doi.org/10.1016/j.ibiod.2021.105247.
    10.1016/j.ibiod.2021.105247
  8. Dias, A.; Carvalho, A.; Silva, M.E.; Lima-Brito, J.; Gaspar, M.J.; Alves, A.; Rodrigues, J.C.; et al. "Physical, chemical and mechanical wood properties of Pinus nigra growing in Portugal". Annals of Forest Science 77 3 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85088386635&partnerID=MN8TOARS.
    10.1007/s13595-020-00984-8
  9. Tomás, D.; Rodrigues, J.C.; Viegas, W.; Silva, M.. "Assessment of high temperature effects on grain yield and composition in bread wheat commercial varieties". Agronomy 10 4 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85083061438&partnerID=MN8TOARS.
    10.3390/agronomy10040499
  10. Alves, A.; Hevia, A.; Simões, R.; Majada, J.; Alia, R.; Rodrigues, J.. "Improving spatial synchronization between X-ray and near-infrared spectra information to predict wood density profiles". Wood Science and Technology 54 5 (2020): 1151-1164. http://www.scopus.com/inward/record.url?eid=2-s2.0-85088654733&partnerID=MN8TOARS.
    10.1007/s00226-020-01207-z
  11. Alves, A.; Simões, R.; Lousada, J.L.; Lima-Brito, J.; Rodrigues, J.. "Predicting the lignin H/G ratio of Pinus sylvestris L. wood samples by PLS-R models based on near-infrared spectroscopy". Holzforschung (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85076304908&partnerID=MN8TOARS.
    10.1515/hf-2019-0186
  12. Alves, A.; Santos, S.; Simões, R.; Rodrigues, J.. "Characterization of residual lignin in cellulose isolated by the diglyme method from three Pinus species by IR spectroscopy and analytical pyrolysis". Holzforschung 72 (2018): 91-96. http://www.scopus.com/inward/record.url?eid=2-s2.0-85037599936&partnerID=MN8TOARS.
    Published • 10.1515/hf-2017-0031
  13. Ployet, R.; Soler, M.; Carocha, V.; Ladouce, N.; Alves, A.; Rodrigues, J.-C.; Harvengt, L.; et al. "Long cold exposure induces transcriptional and biochemical remodelling of xylem secondary cell wall in Eucalyptus". Tree Physiology 38 3 (2018): 409-422. http://www.scopus.com/inward/record.url?eid=2-s2.0-85052579646&partnerID=MN8TOARS.
    10.1093/treephys/tpx062
  14. Fernandes, C.; Gaspar, M.J.; Pires, J.; Alves, A.; Simões, R.; Rodrigues, J.C.; Silva, M.E.; et al. "Physical, chemical and mechanical properties of Pinus sylvestris wood at five sites in Portugal". IForest 10 4 (2017): 669-679. http://www.scopus.com/inward/record.url?eid=2-s2.0-85025137872&partnerID=MN8TOARS.
    10.3832/ifor2254-010
  15. Gebreselassie, M.N.; Ader, K.; Boizot, N.; Millier, F.; Charpentier, J.-P.; Alves, A.; Simões, R.; et al. "Near-infrared spectroscopy enables the genetic analysis of chemical properties in a large set of wood samples from Populus nigra (L.) natural populations". Industrial Crops and Products 107 (2017): 159-171. http://www.scopus.com/inward/record.url?eid=2-s2.0-85020038787&partnerID=MN8TOARS.
    10.1016/j.indcrop.2017.05.013
  16. Moreno-Cortés, A.; Ramos-Sánchez, J.M.; Hernández-Verdeja, T.; González-Melendi, P.; Alves, A.; Simões, R.; Rodrigues, J.C.; et al. "Impact of RAV1-engineering on poplar biomass production: A short-rotation coppice field trial". Biotechnology for Biofuels 10 1 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85020706999&partnerID=MN8TOARS.
    10.1186/s13068-017-0795-z
  17. Salazar, M.M.; Grandis, A.; Pattathil, S.; Neto, J.L.; Camargo, E.L.O.; Alves, A.; Rodrigues, J.C.; et al. "Eucalyptus Cell Wall Architecture: Clues for Lignocellulosic Biomass Deconstruction". Bioenergy Research 9 3 (2016): 969-979. http://www.scopus.com/inward/record.url?eid=2-s2.0-84978834513&partnerID=MN8TOARS.
    10.1007/s12155-016-9770-y
  18. Antunes, C.; Mendes, R.; Lima, A.; Barros, G.; Fields, P.; Da Costa, L.B.; Rodrigues, J.C.; et al. "Resistance of rice varieties to the stored-product insect, sitophilus zeamais (Coleoptera: Curculionidae)". Journal of Economic Entomology 109 1 (2016): 445-453. http://www.scopus.com/inward/record.url?eid=2-s2.0-84983503481&partnerID=MN8TOARS.
    10.1093/jee/tov260
  19. Machado, J.S.; Santos, S.; Pinho, F.F.S.; Luís, F.; Alves, A.; Simões, R.; Rodrigues, J.C.. "Impact of high moisture conditions on the serviceability performance of wood plastic composite decks". Materials and Design 103 (2016): 122-131. http://www.scopus.com/inward/record.url?eid=2-s2.0-84966349269&partnerID=MN8TOARS.
    10.1016/j.matdes.2016.04.030
  20. Pizzo, B.; Pecoraro, E.; Alves, A.; Macchioni, N.; Rodrigues, J.C.. "Quantitative evaluation by attenuated total reflectance infrared (ATR-FTIR) spectroscopy of the chemical composition of decayed wood preserved in waterlogged conditions". Talanta 131 (2015): 14-20. http://www.scopus.com/inward/record.url?eid=2-s2.0-84906087457&partnerID=MN8TOARS.
    10.1016/j.talanta.2014.07.062
  21. Pecoraro, E.; Pizzo, B.; Alves, A.; Macchioni, N.; Rodrigues, J.C.. "Measuring the chemical composition of waterlogged decayed wood by near infrared spectroscopy". Microchemical Journal 122 (2015): 176-188. http://www.scopus.com/inward/record.url?eid=2-s2.0-84930198752&partnerID=MN8TOARS.
    10.1016/j.microc.2015.05.005
  22. Machado, J.S.; Louzada, J.L.; Santos, A.J.A.; Nunes, L.; Anjos, O.; Rodrigues, J.; Simões, R.M.S.; Pereira, H.. "Variation of wood density and mechanical properties of blackwood (Acacia melanoxylon R. Br.)". Materials and Design 56 (2014): 975-980. http://www.scopus.com/inward/record.url?eid=2-s2.0-84891074109&partnerID=MN8TOARS.
    10.1016/j.matdes.2013.12.016
  23. Pereira-Leal, J.B.; Abreu, I.A.; Alabaça, C.S.; Almeida, M.H.; Almeida, P.; Almeida, T.; Amorim, M.I.; et al. "A comprehensive assessment of the transcriptome of Cork oak (Quercus suber) through EST sequencing". BMC Genomics 15 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84901651648&partnerID=MN8TOARS.
    10.1186/1471-2164-15-371
  24. Dorotovic, I.; Louzada, J.L.; Rodrigues, J.C.; Karlovský, V.. "Impact of solar activity on the growth of pine trees: Case study". European Journal of Forest Research 133 4 (2014): 639-648. http://www.scopus.com/inward/record.url?eid=2-s2.0-84904501638&partnerID=MN8TOARS.
    10.1007/s10342-014-0792-8
  25. Santos, A.J.A.; Anjos, O.; Simões, R.; Rodrigues, J.; Pereira, H.. "Kappa number prediction of Acacia melanoxylon unbleached kraft pulps using nir-plsr models with a narrow interval of variation". BioResources 9 4 (2014): 6735-6744. http://www.scopus.com/inward/record.url?eid=2-s2.0-84911451655&partnerID=MN8TOARS.
  26. Camargo, E.L.O.; Nascimento, L.C.; Soler, M.; Salazar, M.M.; Lepikson-Neto, J.; Marques, W.L.; Alves, A.; et al. "Contrasting nitrogen fertilization treatments impact xylem gene expression and secondary cell wall lignification in Eucalyptus". BMC Plant Biology 14 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84908070281&partnerID=MN8TOARS.
    10.1186/s12870-014-0256-9
  27. Costa, N.; Amaral, S.; Alvim, R.; Nogueira, M.; Schwanninger, M.; Rodrigues, J.. "Assessment of resin formulations and determination of the formaldehyde to urea molar ratio by near- and mid-infrared spectroscopy and multivariate data analysis". Journal of Applied Polymer Science 128 1 (2013): 498-508. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872300183&partnerID=MN8TOARS.
    10.1002/app.38206
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  37. Alves, A.; Simoes, R.; Stackpole, D.J.; Vaillancourt, R.E.; Potts, B.M.; Schwanninger, M.; Rodrigues, J.. "Determination of the syringyl/guaiacyl ratio of Eucalyptus globulus wood lignin by near infrared-based partial least squares regression models using analytical pyrolysis as the reference method". Journal of Near Infrared Spectroscopy 19 5 (2011): 343-348. http://www.scopus.com/inward/record.url?eid=2-s2.0-82955207528&partnerID=MN8TOARS.
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  39. Belini, U.L.; Hein, P.R.G.; Filho, M.T.; Rodrigues, J.C.; Chaix, G.. "Near infrared spectroscopy for estimating sugarcane bagasse content in medium density fiberboard". BioResources 6 2 (2011): 1816-1829. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875231337&partnerID=MN8TOARS.
  40. Frade, J.C.; Ribeiro, I.; Graça, J.; Vasconcelos, T.; Rodrigues, J.. "Chemotaxonomic application of Py-GC/MS: Identification of lacquer trees". Journal of Analytical and Applied Pyrolysis 89 1 (2010): 117-121. http://www.scopus.com/inward/record.url?eid=2-s2.0-77955557766&partnerID=MN8TOARS.
    10.1016/j.jaap.2010.06.006
  41. Gaspar, F.; Lopes, J.; Cruz, H.; Schwanninger, M.; Rodrigues, J.. "Application of near infrared spectroscopy and multivariate data analysis for the evaluation of glue lines of untreated and copper azole treated laminated timber before and after ageing". Polymer Degradation and Stability 94 7 (2009): 1061-1071. http://www.scopus.com/inward/record.url?eid=2-s2.0-67349285873&partnerID=MN8TOARS.
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  42. Frade, J.C.; Ribeiro, M.I.; Graça, J.; Rodrigues, J.. "Applying pyrolysis-gas chromatography/mass spectrometry to the identification of oriental lacquers: Study of two lacquered shields". Analytical and Bioanalytical Chemistry 395 7 (2009): 2167-2174. http://www.scopus.com/inward/record.url?eid=2-s2.0-71449107918&partnerID=MN8TOARS.
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    10.1016/j.foreco.2009.03.046
  45. Paiva, J.A.P.; Garcés, M.; Alves, A.; Garnier-Géré, P.; Rodrigues, J.C.; Lalanne, C.; Porcon, S.; et al. "Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue". New Phytologist 178 2 (2008): 283-301. http://www.scopus.com/inward/record.url?eid=2-s2.0-41149143707&partnerID=MN8TOARS.
    10.1111/j.1469-8137.2008.02379.x
  46. Paiva, J.A.P.; Garnier-Géré, P.H.; Rodrigues, J.C.; Alves, A.; Santos, S.; Graça, J.; Le Provost, G.; et al. "Plasticity of maritime pine (Pinus pinaster) wood-forming tissues during a growing season". New Phytologist 179 4 (2008): 1080-1094. http://www.scopus.com/inward/record.url?eid=2-s2.0-49249124004&partnerID=MN8TOARS.
    10.1111/j.1469-8137.2008.02536.x
  47. Alves, A.; Rodrigues, J.; Wimmer, R.; Schwanninger, M.. "Analytical pyrolysis as a direct method to determine the lignin content in wood. Part 2: Evaluation of the common model and the influence of compression wood". Journal of Analytical and Applied Pyrolysis 81 2 (2008): 167-172. http://www.scopus.com/inward/record.url?eid=2-s2.0-39249083970&partnerID=MN8TOARS.
    10.1016/j.jaap.2007.11.001
  48. Da Silva Perez, D.; Guillemain, A.; Alazard, P.; Plomion, C.; Rozenberg, P.; Carlos Rodrigues, J.; Alves, A.; Chantre, G.. "Improvement of Pinus pinaster Ait elite trees selection by combining near infrared spectroscopy and genetic tools". Holzforschung 61 6 (2007): 611-622. http://www.scopus.com/inward/record.url?eid=2-s2.0-35848958101&partnerID=MN8TOARS.
    10.1515/HF.2007.118
  49. Alves, A.; Santos, A.; Da Silva Perez, D.; Rodrigues, J.; Pereira, H.; Simões, R.; Schwanninger, M.. "NIR PLSR model selection for Kappa number prediction of maritime pine Kraft pulps". Wood Science and Technology 41 6 (2007): 491-499. http://www.scopus.com/inward/record.url?eid=2-s2.0-34547592108&partnerID=MN8TOARS.
    10.1007/s00226-007-0130-0
  50. Sousa-Correia, C.; Alves, A.; Rodrigues, J.C.; Ferreira-Dias, S.; Abreu, J.M.; Maxted, N.; Ford-Lloyd, B.; Schwanninger, M.. "Oil content estimation of individual kernels of Quercus ilex subsp. rotundifolia [(Lam) O. Schwarz] acorns by Fourier transform near infrared spectroscopy and partial least squares regression". Journal of Near Infrared Spectroscopy 15 4 (2007): 247-260. http://www.scopus.com/inward/record.url?eid=2-s2.0-34547996899&partnerID=MN8TOARS.
    10.1255/jnirs.733
  51. Godoy, E.Á.; De Carvalho Rodrigues, J.C.; Alves, A.M.M.; Lazo, D.Á.. "Content and quality study of the lignin by analytical pyrolysis in Pinus caribaea | Estudio del contenido y la calidad de la lignina mediante pirólisis analítica en madera de Pinus caribaea". Maderas: Ciencia y Tecnologia 9 2 (2007): 179-188. http://www.scopus.com/inward/record.url?eid=2-s2.0-34548361938&partnerID=MN8TOARS.
  52. Marques, A.V.; Pereira, H.; Rodrigues, J.; Meier, D.; Faix, O.. "Isolation and comparative characterization of a Björkman lignin from the saponified cork of Douglas-fir bark". Journal of Analytical and Applied Pyrolysis 77 2 (2006): 169-176. http://www.scopus.com/inward/record.url?eid=2-s2.0-33748919062&partnerID=MN8TOARS.
    10.1016/j.jaap.2006.03.003
  53. Alves, A.; Schwanninger, M.; Pereira, H.; Rodrigues, J.. "Analytical pyrolysis as a direct method to determine the lignin content in wood: Part 1: Comparison of pyrolysis lignin with Klason lignin". Journal of Analytical and Applied Pyrolysis 76 1-2 (2006): 209-213. http://www.scopus.com/inward/record.url?eid=2-s2.0-32544445027&partnerID=MN8TOARS.
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  54. Pot, D.; Rodrigues, J.-C.; Rozenberg, P.; Chantre, G.; Tibbits, J.; Cahalan, C.; Pichavant, F.; Plomion, C.. "QTLs and candidate genes for wood properties in maritime pine (Pinus pinaster Ait.)". Tree Genetics and Genomes 2 1 (2006): 10-24. http://www.scopus.com/inward/record.url?eid=2-s2.0-33746929080&partnerID=MN8TOARS.
    10.1007/s11295-005-0026-9
  55. Rodrigues, J.C.; Nascimento, A.C.; Alves, A.; Osório, N.M.; Pires, A.S.; Gusmão, J.H.; Da Fonseca, M.M.R.; Ferreira-Dias, S.. "Calibration of near infrared spectroscopy for solid fat content of fat blends analysis using nuclear magnetic resonance data". Analytica Chimica Acta 544 1-2 SPEC. (2005): 213-218. http://www.scopus.com/inward/record.url?eid=2-s2.0-20444507650&partnerID=MN8TOARS.
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  56. Esteves, B.; Gominho, J.; Rodrigues, J.C.; Miranda, I.; Pereira, H.. "Pulping yield and delignification kinetics of heartwood and sapwood of maritime pine". Journal of Wood Chemistry and Technology 25 4 (2005): 217-230. http://www.scopus.com/inward/record.url?eid=2-s2.0-17844396752&partnerID=MN8TOARS.
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  57. Schwanninger, M.; Rodrigues, J.C.; Pereira, H.; Hinterstoisser, B.. "Effects of short-time vibratory ball milling on the shape of FT-IR spectra of wood and cellulose". Vibrational Spectroscopy 36 1 (2004): 23-40. http://www.scopus.com/inward/record.url?eid=2-s2.0-7444251112&partnerID=MN8TOARS.
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  58. Silva, J.P.; Sousa, S.; Rodrigues, J.; Antunes, H.; Porter, J.J.; Gonçalves, I.; Ferreira-Dias, S.. "Adsorption of acid orange 7 dye in aqueous solutions by spent brewery grains". Separation and Purification Technology 40 3 (2004): 309-315. http://www.scopus.com/inward/record.url?eid=2-s2.0-4644244296&partnerID=MN8TOARS.
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  59. Hannrup, B.; Cahalan, C.; Chantre, G.; Grabner, M.; Karlsson, B.; Le Bayon, I.; Jones, G.L.; et al. "Genetic Parameters of Growth and Wood Quality Traits in Picea abies". Scandinavian Journal of Forest Research 19 1 (2004): 14-29. http://www.scopus.com/inward/record.url?eid=2-s2.0-10744227526&partnerID=MN8TOARS.
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  60. Valério, L.; Carter, D.; Rodrigues, J.C.; Tournier, V.; Gominho, J.; Marque, C.; Boudet, A.-M.; et al. "Down regulation of Cinnamyl Alcohol Dehydrogenase, a lignification enzyme, in Eucalyptus camaldulensis". Molecular Breeding 12 2 (2003): 157-167. http://www.scopus.com/inward/record.url?eid=2-s2.0-0142245711&partnerID=MN8TOARS.
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  61. Pot, D.; Chantre, G.; Rozenberg, P.; Rodrigues, J.C.; Jones, G.L.; Pereira, H.; Hannrup, B.; Cahalan, C.; Plomion, C.. "Genetic control of pulp and timber properties in maritime pine (Pinus pinaster Ait.)". Annals of Forest Science 59 5-6 (2002): 563-575. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036662232&partnerID=MN8TOARS.
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Other

Other output
  1. NIR PLSR results obtained by calibration with noisy, low-precision reference values: Are the results acceptable?. 2006. Rodrigues, J.; Alves, A.; Pereira, H.; Da Silva Perez, D.; Chantre, G.; Schwanninger, M.. http://www.scopus.com/inward/record.url?eid=2-s2.0-33746475720&partnerID=MN8TOARS.
    10.1515/HF.2006.063
  2. Calibration of NIR to assess lignin composition (H/G ratio) in maritime pine wood using analytical pyrolysis as the reference method. 2006. Alves, A.; Schwanninger, M.; Pereira, H.; Rodrigues, J.. http://www.scopus.com/inward/record.url?eid=2-s2.0-31144454144&partnerID=MN8TOARS.
    10.1515/HF.2006.006
  3. Determination of monosaccharide composition of Eucalyptus globulus wood by FTIR spectroscopy. 2001. Rodrigues, J.; Puls, O.; Pereira, H.. http://www.scopus.com/inward/record.url?eid=2-s2.0-0035671336&partnerID=MN8TOARS.
    10.1515/HF.2001.044
Activities

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2019/01/05 - 2023/12/18 Spectroscopie Proche InfraRouge (SPIR) – Applications pour la prédiction des propriétés de bois et la discrimination de matériels biologiques à Madagascar. Ecole Doctorale Gestion des Ressources Naturelles et Développement de l’Ecole Supérieure des Sciences Agronomiques (ESSA), Universite D'Antananarivo, Madagascar.
Supervisor of Andriambelo Radonirina Razafimahatratra
 Ecole Doctorale Gestion des Ressources Naturelles et Développement (PhD)
Universite d'Antananarivo Ecole Superieure des Sciences Agronomiques, Madagascar
Distinctions

Award

2001 Prémio da Divisão de Química Analítica da Sociedade Portuguesa de Química Analítica