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CURRENT SITUATION --- Since September 2024, I am a CNRS researcher hosted as an integrated member at GreenUPorto, University of Porto, with the objective of developing scientific cooperation projects between France and Portugal. This follows a period of three years where I was seconded from the CNRS to CIBIO, Portugal, where I served as Associate Director in the context of an EU Teaming grant involving the University of Montpellier. ////////// SCIENTIFIC AREA, OUTPUT, RECOGNITION AND EDITORIAL ACTIVITIES --- Research fields: Evolutionary biology, genomics, bioinformatics -- Research topics: biology of the sexes, sexual systems, sex determination, sex chromosomes, plants -- Publications: 80 articles in peer-reviewed journals (including 9 recommendations in F1000, 3 recommendations in PCI Evol Biol and PCI Genomics), 5 book chapters -- Prizes: CNRS Bronze Medal 2012 (CNRS award for young scientists) -- Invited scientist: Instituto Gulbenkian de Ciência (IGC) – Oeiras, Portugal (3 months in 2009 and 1 year in 2011–2012); ETH Zurich, Switzerland (1 month, 2014); Instituto Superior de Agronomia (ISA) – Lisbon, Portugal (2 years, 2019–2021) -- Editorial and refereeing activities: referee for more than 30 journals (including Nature, Science, Nature Communications, Nature Plants, PNAS, Current Biology, PLoS Biology, Genome Research, MBE) and more than 10 funding agencies (including ERC, ANR, Marie Curie). PCI recommender. Panel Member for ANR (2015) -- ////////// MANAGEMENT EXPERIENCE AND TRAINING --- Associate Director of CIBIO – Associação BIOPOLIS in the context of the H2020 Teaming project “BIOPOLIS” (30 M€) -- Creation and leadership of the research group “Sex and Evolution” at LBBE for 10 years (2009–2019) -- Training in positive leadership and management: University Degree (DU) in “Positive Psychology”, University Grenoble-Alpes (2015–2016) -- ////////// SUPERVISION, MENTORING AND TEACHING --- Supervision of 7 postdoctoral researchers, 7 PhD students, and 22 Master’s students (including 5 former PhD students/postdocs recruited as permanent researchers or professors at CNRS, CIRAD, INRIA, and Universidad de O’Higgins, Chile) -- Teaching experience: 64 hours/year until 2011 and approximately 20 hours/year until 2021 in evolutionary biology, molecular evolution, genomics, and bioinformatics at Master’s and PhD levels, in Lyon (France) and abroad. Creation and coordination of the EU course “Comparative Genomics” within the Master of Biosciences at ENS Lyon (2008–2011) -- ////////// TRACK RECORD IN GRANTS AND CONTRACTS --- Grants as main coordinator: PlantGenomYX – ANR PRC (started in 2021, 592 k€), NGSex – ANR PRC (2015–2019, 500 k€), SiXY – ANR Starting Grant (2009–2011, 150 k€); Grants as co-PI: LongevitY – ANR PRC (started in 2021, 597 k€), SexPrim – ANR PRC (2013–2017, 512 k€), Trans – ANR PRC (2012–2016, 530 k€), Melody – ANR PRC (2012–2016, 600 k€) -- ////////// COMMUNICATION EXPERIENCE --- 17 invited talks at international meetings and workshops (e.g. SMBE annual meetings, CNRS Jacques Monod conferences, meetings of PhD students in evolutionary biology, Lausanne Genomics Days) -- 36 invited seminars in European universities (e.g. BiRC – Aarhus, Milner Centre – Bath, Institute for Ecology and Evolution – Bern, Institute of Evolutionary Biology – Edinburgh, Max Planck Institute – Cologne, Department of Ecology and Evolution – Lausanne, ISA – Lisbon, CEFE and ISEM – Montpellier, Botanical Garden Munich, IGC – Oeiras, Max Planck Institute – Tübingen, Linnean Centre – Uppsala, ETH Zurich) -- Organisation of several symposia and meetings, including SMBE 2010 in Lyon (co-lead organiser)
Identification

Personal identification

Full name
Gabriel Marais

Citation names

  • Marais, Gabriel

Author identifiers

Ciência ID
501B-124F-D291
ORCID iD
0000-0003-2134-5967
Google Scholar ID
7_E0yccAAAAJ

Telephones

Mobile phone
  • (+33) 782338351 (Professional)
  • (+351) 960293183 (Professional)

Addresses

  • GreenUPorto, Vairao campus, 4485-661, Vairão, Vila do Conde, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Evolutionary Biology

Languages

Language Speaking Reading Writing Listening Peer-review
French (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Portuguese Upper intermediate (B2) Advanced (C1) Elementary (A2) Advanced (C1) Intermediate (B1)
Education
Degree Classification
2009
Concluded
n/a (Título de Agregado)
Université Claude Bernard Lyon 1, France
"Evolution du génome et recombinaison : le cas des chromosomes sexuels" (THESIS/DISSERTATION)
n/a
2002
Concluded
n/a (Doutoramento)
Université Claude Bernard Lyon 1, France
"Les effets pervers du sexe sur l'évolution du génome" (THESIS/DISSERTATION)
n/a
Affiliation

Science

Category
Host institution
Employer
2024/09 - Current Invited Coordinator Researcher (Research) Centre National de la Recherche Scientifique, France
Universidade do Porto GreenUPorto Centro de Investigação em Produção Agroalimentar Sustentável, Portugal
2021/09/01 - Current Science and Technology Management Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2012/09/01 - 2021/08/31 Coordinating Researcher (Research) Centre National de la Recherche Scientifique, France
Université Claude Bernard Lyon 1, France
2019/07/18 - 2020/06/30 Visiting Researcher (Research) Centre National de la Recherche Scientifique, France
Universidade de Lisboa Instituto Superior de Agronomia, Portugal
2014/04/15 - 2014/05/15 Visiting Researcher (Research) Centre National de la Recherche Scientifique, France
Eidgenössische Technische Hochschule Zürich, Switzerland
2011/09/01 - 2012/08/31 Visiting Researcher (Research) Centre National de la Recherche Scientifique, France
Instituto Gulbenkian de Ciência, Portugal
2008/10/01 - 2012/08/31 Principal Investigator (Research) Centre National de la Recherche Scientifique, France
Université Claude Bernard Lyon 1, France
2009/06/01 - 2009/08/31 Visiting Researcher (Research) Centre National de la Recherche Scientifique, France
Instituto Gulbenkian de Ciência, Portugal
2004/10/01 - 2008/09/30 Auxiliary Researcher (Research) Centre National de la Recherche Scientifique, France
Université Claude Bernard Lyon 1, France

Others

Category
Host institution
Employer
2002/10/01 - 2004/09/30 Postdoc The University of Edinburgh, United Kingdom
Projects

Grant

Designation Funders
2002/10/01 - 2004/08/31 Marie Curie fellowship: Population genetics of biased gene conversion
MCFI-2002-00908
Post-doc Fellow
The University of Edinburgh, United Kingdom
European Commission Seventh Framework Programme for Research and Technological Development People
Concluded
1999/09/01 - 2002/08/31 Ministry of Science studentship: Recombination and genome evolution
Bourse AMN 1999-2002
PhD Student Fellow
Gouvernement francais Ministère de l'Enseignement supérieur de la Recherche et de l'Innovation, France
Concluded

Contract

Designation Funders
2021/01/01 - 2026/12/31 PlantGenomYX - Identifying the sex-determining genes in the dioecious plant Silene latifolia
ANR-20-CE20-0015-01
Principal investigator
Centre National de la Recherche Scientifique, France

Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Agence nationale de la recherche
Ongoing
2021/01/01 - 2026/12/31 LongevitY - Exploring the contribution of sex chromosomes to male/female differences in aging and longevity
ANR-20-CE02-0015
Co-Principal Investigator (Co-PI)
Centre National de la Recherche Scientifique, France

Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Agence nationale de la recherche
Ongoing
2015 - 2019 NGSex: a NGS approach to study plant sex chromosomes
ANR-14-CE19-0021
Principal investigator
Agence nationale de la recherche
Concluded
2013 - 2017 SexPrim: Sex chromosome evolution and Y degeneration within the Primate lineage
ANR-12- BSV7-0002-04
Co-Principal Investigator (Co-PI)
Agence nationale de la recherche
Concluded
2012 - 2016 TRANS: Sexual system transitions in angiosperms and their genomic consequences
ANR-11-BSV7-013-03
Co-Principal Investigator (Co-PI)
Agence nationale de la recherche
Concluded
2012 - 2016 MELODY: Plant sex determination - functional characterization of the monoecy and gynoecy genes in Cucurbitaceae.
ANR-11-BSV7-024
Co-Principal Investigator (Co-PI)
Agence nationale de la recherche
Concluded
2009 - 2011 SiXY: Evolutionary genomics of the Silene latifolia XY chromosomes, a dioecious plant
ANR-08-JCJC-0109
Principal investigator
Agence nationale de la recherche
Concluded
Outputs

Publications

Book chapter
  1. Jean-François Lemaître; Jean-Michel Gaillard; Dominique Pontier; Hugo Cayuela; Cristina Vieira; Gabriel Marais. "Sex Differences in Lifespan, Ageing and Health in the Living World". 2024.
    10.1017/9781009007245.010
  2. Gabriel Marais; Jos Käfer. "Homme/femme, mâle/femelle : la détermination du sexe dans l’espèce humaine et le reste du vivant". 2019.
  3. Aline Muyle; G. Marais. "Mating Systems in Plants, Genome Evolution and". 2016.
    10.1016/B978-0-12-800049-6.00320-6
  4. L. Duret; T. Bataillon; N. Bierne; Vincent Daubin; J. Dutheil; Christian Gautier; S. Glémin; et al. "Evolution Moléculaire". 2010.
Conference paper
  1. Jordan Teoli; Claire Bardel; Marie Fablet; Gabriel Marais; François Gueyffier; Jean-François Lemaître; Jean-Michel Gaillard; et al. "Syndrome de Klinefelter, rôle du chromosome Y dans l’espérance de vie humaine ?". 2020.
    10.1016/j.ando.2020.07.150
Conference poster
  1. Bérénice Batut; Mathilde Dumond; Gabriel Marais; Guillaume Beslon; Carole Knibbe. "Simulating evolutionary scenarios to test whether they can induce reductive evolution". 2012.
Journal article
  1. Joshua Zhang; Jordan Teoli; Benjamin Rey; Cristina Vieira; Jean-françois Lemaitre; Ingrid Plotton; Gabriel Marais; Steve Horvath. "Epigenetic Clock Analysis of Sex Chromosome Aneuploidies". Aging Cell (2025): https://hal.science/hal-05299075.
    10.1111/acel.70243
  2. Prentout, Djivan; El Aoudati, Salma; Mathis, Fabienne; Marais, Gabriel A B; Henri, Hélène. "Promising high fidelity genetic markers for sexing Cannabis sativa seedlings". G3: Genes, Genomes, Genetics (2025): https://doi.org/10.1093/g3journal/jkaf077.
    10.1093/g3journal/jkaf077
  3. Branco, Catarina; Roxo, Guilherme; Chapoix, Isaline; Rego, Ruben M C; Tessarotto, Hugo; Santoni, Sylvain; Moura, Monica; Marais, Gabriel A B. "A XY chromosome system in Laurus azorica, an endemic dioecious laurel from the Azores". Journal of Evolutionary Biology (2025): https://doi.org/10.1093/jeb/voaf032.
    10.1093/jeb/voaf032
  4. Moraga, Carol; Branco, Catarina; Rougemont, Quentin; Jedlicka, Pavel; Mendoza-Galindo, Eddy; Veltsos, Paris; Hanique, Melissa; et al. "The Silene latifolia genome and its giant Y chromosome". Science 387 6734 (2025): 630-636. https://doi.org/10.1126/science.adj7430.
    10.1126/science.adj7430
  5. Cayuela, Hugo; Gaillard, Jean-Michel; Vieira, Cristina; Ronget, Victor; Gippet, Jérôme M.W.; Conde García, Thamar; Marais, Gabriel A.B.; Lemaître, Jean-François. "Sex differences in adult lifespan and aging rate across mammals: A test of the ‘Mother Curse hypothesis’". Mechanisms of Ageing and Development 212 (2023): 111799. https://doi.org/10.1016/j.mad.2023.111799.
    10.1016/j.mad.2023.111799
  6. Gabriel Marais; Jean-François Lemaître Lemaître. "Sex chromosomes, sex ratios and sex gaps in longevity in plants". Philosophical Transactions of the Royal Society B: Biological Sciences (2022): https://hal.science/hal-03615239.
    10.1098/rstb.2021.0219
  7. Muyle, Aline; Marais, Gabriel A. B.; Bacovský, Václav; Hobza, Roman; Lenormand, Thomas. "Dosage compensation evolution in plants: theories, controversies and mechanisms". Philosophical Transactions of the Royal Society B: Biological Sciences 377 1850 (2022): https://doi.org/10.1098/rstb.2021.0222.
    10.1098/rstb.2021.0222
  8. Marine Paucsik; Christophe Leys; Gabriel Marais; Céline Baeyens; Rebecca Shankland. "Self-compassion and savouring buffer the impact of the first year of the COVID-19 on PhD students' mental health". Stress and Health (2022): https://hal.univ-grenoble-alpes.fr/hal-03614752.
    10.1002/smi.3142
  9. Cayuela, Hugo; Lemaître, Jean-François; Léna, Jean-Paul; Ronget, Victor; Martínez-Solano, Iñigo; Muths, Erin; Pilliod, David S.; et al. "Sex-related differences in aging rate are associated with sex chromosome system in amphibians". Evolution 76 2 (2022): 346-356. https://doi.org/10.1111/evo.14410.
    10.1111/evo.14410
  10. Käfer, Jos; Bewick, Adam; Andres-Robin, Amélie; Lapetoule, Garance; Harkess, Alex; Caïus, José; Fogliani, Bruno; et al. "A derived ZW chromosome system in Amborella trichopoda, representing the sister lineage to all other extant flowering plants". New Phytologist 233 4 (2021): 1636-1642. https://doi.org/10.1111/nph.17662.
    10.1111/nph.17662
  11. Prentout, Djivan; Stajner, Natasa; Cerenak, Andreja; Tricou, Theo; Brochier-Armanet, Celine; Jakse, Jernej; Käfer, Jos; Marais, Gabriel A. B.. "Plant genera Cannabis and Humulus share the same pair of well-differentiated sex chromosomes". New Phytologist 231 4 (2021): 1599-1611. https://doi.org/10.1111/nph.17456.
    10.1111/nph.17456
  12. Muyle, Aline; Bachtrog, Doris; Marais, Gabriel A. B.; Turner, James M. A.. "Epigenetics drive the evolution of sex chromosomes in animals and plants". Philosophical Transactions of the Royal Society B: Biological Sciences 376 1826 (2021): 20200124. https://doi.org/10.1098/rstb.2020.0124.
    10.1098/rstb.2020.0124
  13. Käfer, Jos; Lartillot, Nicolas; Marais, Gabriel A B; Picard, Franck. "Detecting sex-linked genes using genotyped individuals sampled in natural populations". Genetics 218 2 (2021): https://doi.org/10.1093/genetics/iyab053.
    10.1093/genetics/iyab053
  14. Gabriel Marais; Sophie Lantheaume; Robin Fiault; rebecca shankland. "Mindfulness-Based Programs Improve Psychological Flexibility, Mental Health, Well-Being, and Time Management in Academics". European Journal of Investigation in Health, Psychology and Education (2020): https://www.mdpi.com/2254-9625/10/4/73.
    10.3390/ejihpe10040073
  15. Marais, Gabriel A.B.; Batut, Bérénice; Daubin, Vincent. "Genome Evolution: Mutation Is the Main Driver of Genome Size in Prokaryotes". Current Biology 30 19 (2020): R1083-R1085. https://doi.org/10.1016/j.cub.2020.07.093.
    10.1016/j.cub.2020.07.093
  16. Muyle, Aline; Martin, Hélène; Zemp, Niklaus; Mollion, Maéva; Gallina, Sophie; Tavares, Raquel; Silva, Alexandre; et al. "Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant GenusSilene". Molecular Biology and Evolution 38 3 (2020): 805-818. https://doi.org/10.1093/molbev/msaa229.
    10.1093/molbev/msaa229
  17. Badouin, Hélène; Velt, Amandine; Gindraud, François; Flutre, Timothée; Dumas, Vincent; Vautrin, Sonia; Marande, William; et al. "The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication". Genome Biology 21 1 (2020): https://doi.org/10.1186/s13059-020-02131-y.
    10.1186/s13059-020-02131-y
  18. Cécile Fruchard; Hélène Badouin; David Latrasse; Ravi Suresh Devani; Aline Muyle; Bénédicte Rhoné; Susanne Renner; et al. "Evidence for Dosage Compensation in Coccinia grandis, a Plant with a Highly Heteromorphic XY System". Genes (2020): https://www.mdpi.com/2073-4425/11/7/787.
    10.3390/genes11070787
  19. Gabriel Marais; Sophie Lantheaume; Robin Fiault; Rebecca Shankland. "Mindfulness-based programs improve psychological flexibility, mental health, well-being and time management in academics". European Journal of Investigation in Health, Psychology and Education (2020): https://hal.univ-grenoble-alpes.fr/hal-04054045.
    10.31234/osf.io/9w4zp
  20. Lemaître, Jean-François; Ronget, Victor; Tidière, Morgane; Allainé, Dominique; Berger, Vérane; Cohas, Aurélie; Colchero, Fernando; et al. "Sex differences in adult lifespan and aging rates of mortality across wild mammals". Proceedings of the National Academy of Sciences 117 15 (2020): 8546-8553. https://doi.org/10.1073/pnas.1911999117.
    10.1073/pnas.1911999117
  21. Prentout, Djivan; Razumova, Olga; Rhoné, Bénédicte; Badouin, Hélène; Henri, Hélène; Feng, Cong; Käfer, Jos; Karlov, Gennady; Marais, Gabriel A.B.. "An efficient RNA-seq-based segregation analysis identifies the sex chromosomes of Cannabis sativa". Genome Research 30 2 (2020): 164-172. https://doi.org/10.1101/gr.251207.119.
    10.1101/gr.251207.119
  22. Paris Veltsos; Kate Ridout; Melissa Toups; Santiago González-Martínez; Aline Muyle; Olivier Emery; Pasi Rastas; et al. "Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua". Genetics (2019): https://cnrs.hal.science/hal-02347957.
    10.1534/genetics.119.302045
  23. Hélène Martin; Fantin E Carpentier; Sophie Gallina; Cécile Godé; Eric Schmitt; Aline Muyle; Gabriel Marais; Pascal Touzet. "Evolution of Young Sex Chromosomes in Two Dioecious Sister Plant Species with Distinct Sex Determination Systems". Genome Biology and Evolution (2019): https://hal.science/hal-02265377.
    10.1093/gbe/evz001
  24. Aline Muyle; Niklaus Zemp; Cécile Fruchard; Radim Cegan; Jan Vrána; Clothilde Deschamps; Raquel Tavares; et al. "Genomic imprinting mediates dosage compensation in a young plant XY system". Nature Plants (2018): https://cnrs.hal.science/hal-02347985.
    10.1038/s41477-018-0221-y
  25. Jos Käfer; Andrea Betancourt; Avelyne S. Villain; Marie Fernandez; Clémentine Vignal; Gabriel Marais; Maud Tenaillon. "Progress and Prospects in Gender Visibility at SMBE Annual Meetings". Genome Biology and Evolution (2018): https://hal.science/hal-02310560.
    10.1093/gbe/evy056
  26. Gabriel Marais; Rebecca Shankland; Pascale Haag; Robin Fiault; Briget Juniper. "A Survey and a Positive Psychology Intervention on French PhD Student Well-being". International Journal of Doctoral Studies (2018): https://hal.science/hal-02073821.
    10.28945/3948
  27. Gabriel Marais; Sylvain Charlat. "A newly evolved W(olbachia) sex chromosome in pillbug!". Peer Community In Evolutionary Biology (2017): https://hal.science/hal-01467641.
    10.24072/pci.evolbiol.100016
  28. Jos Käfer; Gabriel Marais; Jr. Pannell. "On the rarity of dioecy in flowering plants". Molecular Ecology (2017): https://hal.science/hal-01943810.
    10.1111/mec.14020
  29. A. Muyle; R. Shearn; Gabriel Marais. "The Evolution of Sex Chromosomes and Dosage Compensation in Plants". Genome Biology and Evolution (2017): https://hal.science/hal-01943816.
    10.1093/gbe/evw282
  30. N. Zemp; R. Tavares; A. Muyle; D. Charlesworth; Gabriel Marais; A. Widmer. "Evolution of sex-biased gene expression in a dioecious plant". Nature Plants (2016): https://univ-lyon1.hal.science/hal-02049902.
    10.1038/nplants.2016.168
  31. A. Muyle; Jos Käfer; N. Zemp; S. Mousset; Franck Picard; Gabriel Marais. "SEX-DETector: a probabilistic approach to study sex chromosomes in non-model organisms". Genome Biology and Evolution (2016): https://univ-lyon1.hal.science/hal-02053627.
    10.1093/gbe/evw172
  32. Nicolas Blavet; Hana Blavet; Aline Muyle; Jos Käfer; Radim Cegan; Clothilde Deschamps; Niklaus Zemp; et al. "Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia". BMC Genomics (2015): https://hal.inrae.fr/hal-02637603.
    10.1186/s12864-015-1698-7
  33. Bérénice Batut; Carole Knibbe; Gabriel Marais; Vincent Daubin. "Reductive genome evolution at both ends of bacterial population size spectrum". Nature Reviews Microbiology (2014): https://hal.science/hal-01092392.
    10.1038/nrmicro3331
  34. Sophia S. Ahmed; J. Mark Cock; Eugenie Pessia; Remy Luthringer; Alexandre Cormier; Marine Robuchon; Lieven Sterck; et al. "A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.". Current Biology (2014): https://hal.sorbonne-universite.fr/hal-01132642.
    10.1016/j.cub.2014.07.042
  35. T. Schwander; Gabriel Marais; D. Roze. "Sex uncovered: the evolutionary biology of reproductive systems". Journal of Evolutionary Biology (2014): https://univ-lyon1.hal.science/hal-02045518.
  36. E. Pessia; J. Engelstadter; G. Marais. "The evolution of X chromosome inactivation in mammals: the demise of Ohno's hypothesis?". Cellular and Molecular Life Sciences (2013): https://hal.science/hal-02282695.
    10.1007/s00018-013-1499-6
  37. Eugénie Pessia; Alexandra Popa; Sylvain Mousset; Clément Rezvoy; Laurent Duret; G. Marais. "Evidence for Widespread GC-biased Gene Conversion in Eukaryotes". Genome Biology and Evolution (2012): https://univ-lyon1.hal.science/hal-02282748.
    10.1093/gbe/evs052
  38. E. Pessia; T. Makino; M. Bailly-Bechet; A. Mclysaght; Gabriel Marais. "Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome". Proceedings of the National Academy of Sciences of the United States of America (2012): https://hal.science/hal-00698392.
    10.1073/pnas.1116763109
  39. A. Muyle; N. Zemp; C. Deschamps; Sylvain Mousset; A. Wildmer; Gabriel Marais. "Rapid De Novo Evolution of X Chromosome Dosage Compensation in Silene latifolia a Plant with Young Sex Chromosomes". PLoS Biology (2012): https://hal.science/hal-00698081.
    10.1371/journal.pbio.1001308
  40. C. Parage; R. Tavares; S. Réty; R. Baltenweck-Guyot; A. Poutaraud; L. Renault; D. Heintz; et al. "Structural, functional and evolutionary analysis of the unusually large stilbene synthase gene family in grapevine (Vitis vinifera)". Plant Physiology (2012): https://hal.science/hal-00753657.
  41. N. Blavet; D. Charif; C. Oger-Desfeux; Gabriel Marais; A. Widmer. "Comparative high-throughput transcriptome sequencing and development of SiESTa, the \textitSilene EST annotation database". BMC Genomics (2011): https://univ-lyon1.hal.science/hal-02303175.
    10.1186/1471-2164-12-376
  42. Gabriel Marais; A. Forrest; E. Kamau; Jos Käfer; Vincent Daubin; D. Charlesworth. "Multiple Nuclear Gene Phylogenetic Analysis of the Evolution of Dioecy and Sex Chromosomes in the Genus Silene". PLoS ONE (2011): https://hal.science/hal-00698036.
    10.1371/journal.pone.0021915
  43. Y.E. Zhang; M.D. Vibranovski; P. Landback; Gabriel Marais; M. Long. "Chromosomal Redistribution of Male-Biased Genes in Mammalian Evolution with Two Bursts of Gene Gain on the X Chromosome". PLoS Biology (2010): https://hal.science/hal-00539515.
    10.1371/journal.pbio.1000494
  44. R. Dubruille; G.A. Orsi; L. Delabaere; E. Cortier; P. Couble; Gabriel Marais; B. Loppin. "Specialization of a Drosophila Capping Protein Essential for the Protection of Sperm Telomeres". Current Biology (2010): https://hal.science/hal-00698442.
    10.1016/j.cub.2010.11.013
  45. A. Hochwagen; Gabriel Marais. "Meiosis: A PRDM9 Guide to the Hotspots of Recombination". Current Biology (2010): https://hal.science/hal-00539455.
    10.1016/j.cub.2010.01.048
  46. Gabriel Marais; P.R.A. Campos; I. Gordo. "Can Intra-Y Gene Conversion Oppose the Degeneration of the Human Y Chromosome? A Simulation Study". Genome Biology and Evolution (2010): https://hal.science/hal-00539484.
  47. Claire Lemaitre; Marília D.V. Braga; Christian Gautier; M.-F. Sagot; Eric Tannier; Gabriel Marais. "Footprints of Inversions at Present and Past Pseudoautosomal Boundaries in Human Sex Chromosomes". Genome Biology and Evolution (2009): https://hal.science/hal-00428362.
  48. Md. Moccia; C. Oger-Desfeux; Gabriel Marais; A. Widmer. "A White Campion textit(Silene latifolia) floral expressed sequence tag (EST) library: annotation EST-SSR characterization transferability and utility for comparative mapping". BMC Genomics (2009): https://hal.science/hal-00428361.
  49. G. Bernasconi; J. Antonovics; A. Biere; D. Charlesworth; Lf. Delph; D. Filatov; T. Giraud; et al. "Silene as a model system in ecology and evolution". Heredity (2009): https://hal.science/hal-00428347.
  50. Gabriel Marais; L. Duret. "L’évolution des chromosomes sexuels humains". Biofutur (2009): https://hal.science/hal-00539330.
  51. Gabriel Marais; Michael Nicolas; R. Bergero; Pierre Chambrier; E. Keinovsky; Françoise Moneger; R. Hobza; A. Widmer; D. Charlesworth. "Evidence for degeneration of the Y chromosome in the dioecious plant Silene latifolia". Current Biology (2008): https://hal.science/hal-00412855.
  52. Gabriel Marais; M. Nicolas; R. Bergero; P. Chambrier; E. Kejnovsky; F. Monéger; R. Hobza; A. Widmer; D. Charlesworth. "Evidence for Degeneration of the Y Chromosome in the Dioecious Plant Silene latifolia". Current Biology (2008): https://hal.science/hal-00428084.
  53. Gabriel Marais. "Sex chromosomes and mitochondrial DNA polymorphism in birds: The Hill–Robertson effects extend from nucleus to mitochondria". Heredity (2007): https://hal.science/hal-00434819.
  54. E. Kejnovsky; R. Hobza; Z. Kubat; A. Widmer; Gabriel Marais; B. Vyskot. "High intrachromosomal similarity of retrotransposon long terminal repeats: Evidence for homogenization by gene conversion on plant sex chromosomes?". Gene (2007): https://hal.science/hal-00434731.
  55. Gabriel Marais; A. Calteau; O. Tenaillon. "Mutation rate and genome reduction in endosymbiotic and free-living bacteria". Genetica (2007): https://hal.science/hal-00434820.
  56. C. Rezvoy; D. Charif; Laurent Guéguen; Gabriel Marais. "MareyMap: an R-based tool with graphical interface for estimating recombination rates". Bioinformatics (2007): https://hal.science/hal-00434645.
  57. Yves Clément; Raquel Tavares; Gabriel Marais. "Does lack of recombination enhance asymmetric evolution among duplicate genes? Insights from the Drosophila melanogaster genome". Gene (2006): https://hal.science/hal-00427925.
    10.1016/j.gene.2006.05.032
  58. Michael Nicolas; Gabriel Marais; Vladka Hykelova; Bohuslav Janousek; Valérie Laporte; Boris Vyskot; Dominique Mouchiroud; et al. "A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants.". PLoS Biology (2005): https://hal.science/hal-00188780.
    10.1371/journal.pbio.0030004
  59. D. Charlesworth; B. Charlesworth; Gabriel Marais. "Steps in the evolution of heteromorphic sex chromosomes". Heredity (2005): https://hal.science/hal-00427860.
  60. Gabriel Marais; P. Nouvellet; P.D. Keightley; B. Charlesworth. "Intron size and exon evolution in Drosophila". Genetics (2005): https://hal.science/hal-00427785.
  61. M. Nicolas; Gabriel Marais; V. Hykelova; B. Janousek; V. Laporte; B. Vyskot; Dominique Mouchiroud; et al. "A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants". PLoS Biology (2005): https://hal.science/hal-00427796.
  62. Gabriel Marais; B. Charlesworth; S.I. Wright. "Recombination and base composition: the case of the highly self-fertilizing plant Arabidopsis thaliana". Genome Biology (2004): https://hal.science/hal-00427687.
  63. Gabriel Marais; T. Domazet-Loso; D. Tautz; B. Charlesworth. "Correlated evolution of synonymous and nonsynonymous sites in Drosophila". Journal of Molecular Evolution (2004): https://hal.science/hal-00427623.
  64. Carène Rizzon; Edwige Martin; Gabriel Marais; Laurent Duret; Laurent Ségalat; Christian Biémont. "Patterns of selection against transposons inferred from the distribution of Tc1, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans.". Genetics (2003): https://hal.science/hal-00194461.
  65. C. Rizzon; E. Martin; Gabriel Marais; L. Duret; L. Segalat; C. Biémont. "Patterns of selection against transposons inferred from the distribution of Tc1 Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans". Genetics (2003): https://hal.science/hal-00427476.
  66. Gabriel Marais; Dominique Mouchiroud; L. Duret. "Neutral effect of recombination on base composition in Drosophila". Genetical Research (2003): https://hal.science/hal-00427447.
  67. Gabriel Marais. "Biased gene conversion: implications for genome and sex evolution". Trends in Genetics (2003): https://hal.science/hal-00427448.
  68. C. Rizzon; E. Martin; G. Marais; L. Duret; L. Segalat; C. Biemont. "Patterns of selection against transposons inferred from the distribution of Tcl, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans.". Genetics (2003): https://hal.science/hal-00144031.
  69. Gabriel Marais; N. Galtier. "Sex chromosomes: how X-Y recombination stops". Current Biology (2003): https://hal.science/hal-00427446.
  70. Gabriel Marais; B. Charlesworth. "Genome evolution: recombination speeds up adaptive evolution". Current Biology (2003): https://hal.science/hal-00427445.
  71. Gabriel Marais; G. Piganeau. "Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes". Molecular Biology and Evolution (2002): https://hal.science/hal-00427287.
  72. C. Rizzon; Gabriel Marais; Manolo Gouy; C. Biémont. "Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome". Genome Research (2002): https://hal.science/hal-00427298.
    10.1101/gr.210802
  73. Gabriel Marais; Dominique Mouchiroud; L. Duret. "Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes". Proceedings of the National Academy of Sciences of the United States of America (2001): https://hal.science/hal-00427184.
  74. Gabriel Marais; L. Duret. "Synonymous codon usage accuracy of translation and gene length in Caenorhabditis elegans". Journal of Molecular Evolution (2001): https://hal.science/hal-00427183.
  75. L. Duret; Gabriel Marais; C. Biémont. "Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans". Genetics (2000): https://hal.science/hal-00427072.
Working paper
  1. Jos Käfer; Nicolas Lartillot; Gabriel Marais; Franck Picard. 2020. "Detecting sex-linked genes using genotyped individuals sampled in natural populations". https://hal.science/hal-02490340.
    10.1101/2020.01.31.928291

Other

Other output
  1. Y chromosome makes fruit flies die younger. 2020. Gabriel Marais; Jean-François Lemaitre; Cristina Vieira. https://hal.science/hal-02908713.
    10.24072/pci.evolbiol.100105
Distinctions

Other distinction

2012 CNRS award for young scientists (Médaille de Bronze)
Centre National de la Recherche Scientifique, France