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Maryam Abbasi is an assistant invited Professor at the Instituto Superior de Engenharia de Coimbra (ISEC) and Instituto Superior de Miguel Torga (ISMT). She is a member of the Laboratory of Artificial Neural Networks (LARN) at the Adaptive Computation group (AC)of the Centre for Informatics and Systems (CISUC) , Department of Informatics Engineering, University of Coimbra since 2011. Maryam Abbasi completed her PhD in Ciências e Tecnologias da Informação (Evolutionary computation algorithm subarea of artificial intelligence) in 2019/03/18 at the Department of Informatic Engineering, University of Coimbra and got her master her in Computer Science from the University of Tehran and bachelor degree in Computer Science from University of Tehran. Her research has been in machine learning, deep learning, pattern recognition, multiobjective optimization, big data streams, sequence alignment, iterated local search, decision support systems and biological applications. Currently, she is focused on deep learning and information generation from gene expression and molecular structure. Maryam Abbasi has co-authored more than 60 publications, of which 13 are in international high-impact peer-reviewed journals and 17 are book chapters. She has also been a reviewer in several international journals. In the last years, she has supervised students and was responsible for supervising 1 PhD student, 7 Master students and 3 undergrad students. she has received 3 awards and/or honours. She also worked as a consulter/Researcher at the 0and1 Information Technology company and participated in different projects in the subfield of artificial intelligence area. In her curriculum Ciência Vitae the most frequent terms in the context of scientific, technological and artistic-cultural output are Machine Learning; Deep learning; Pattern Recognition; Multiobjective Optimization; Evolutionary Algorithm; Computational Biology, big data and drug design.
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Identification

Personal identification

Full name
Maryam Abbasi

Author identifiers

Ciência ID
4317-9113-7F7C
ORCID iD
0000-0002-9011-0734

Knowledge fields

  • Exact Sciences - Computer and Information Sciences - Computer Sciences

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Upper intermediate (B2) Advanced (C1) Upper intermediate (B2) Upper intermediate (B2)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Iranian (Other) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2019/03/18
Concluded
 Ciências e Tecnologias da Informação (Doutoramento)
Major in Sem especialidade
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
"Formulação, Algoritmos e Aplicação de Alinhamento de Sequências Multiobjetivo" (THESIS/DISSERTATION)
2008/02/17
Concluded
 Computer Science (Mestrado)
University of Tehran, Iran
"The Relationship between Genome Sequence and Its Resistance to Ionizing Radiation" (THESIS/DISSERTATION)
2005/02/03
Concluded
 Computer Science (Licenciatura)
University of Tehran, Iran
"Computational NeuroScience" (THESIS/DISSERTATION)
Affiliation

Science

Category
Host institution 		Employer
2023/01/02 - Current Researcher (Research) Instituto Politécnico de Coimbra, Portugal
Instituto Politécnico de Coimbra, Portugal
2019/01/01 - 2023/02/01 Researcher (Research) Universidade de Coimbra Centro de Informatica e Sistemas, Portugal
Universidade de Coimbra Centro de Informatica e Sistemas, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2022/09/01 - 2023/01/01 Invited Assistant (Polytechnic Teacher) Instituto Superior Miguel Torga, Portugal
Instituto Superior Miguel Torga, Portugal
2021/09 - 2022/02 Invited Assistant (University Teacher) Universidade de Coimbra Departamento de Engenharia Informática, Portugal
Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2021/02 - 2021/09 Invited Assistant (Polytechnic Teacher) Instituto Politécnico de Coimbra Instituto Superior de Contabilidade e Administração de Coimbra, Portugal
Instituto Politécnico de Coimbra Instituto Superior de Contabilidade e Administração de Coimbra, Portugal
2020/09 - 2021/02 Invited Assistant (University Teacher) Universidade de Coimbra Departamento de Engenharia Informática, Portugal
Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2007/09 - 2011/09 Assistant (University Teacher) University of Tehran, Iran
2009/02/01 - 2010/06/30 Invited Assistant Professor (University Teacher) Islamic Azad University East Tehran Branch, Iran

Other Careers

Category
Host institution 		Employer
2005/05 - 2010/12 Especialista Informática Grau 3 Nível 1 (Especialista de informática) 0and1 Information Technology Co, Iran

Others

Category
Host institution 		Employer
2024/01/01 - Current Researcher Instituto Politécnico de Coimbra Centro de Estudos de Recursos Naturais Ambiente e Sociedade, Portugal
Projects

Grant

Designation Funders
2013/09 - 2017/09 SFRH/BD/91451/2012
SFRH/BD/91451/2012
 Fundação para a Ciência e a Tecnologia
2012/01 - 2013/12 RepSys - Representation systems with quality guarantees for multi-objective optimization problems DAAD/CRUP Bilateral Cooperation Research Project
2010/04 - 2013/09 MOSAL - Multi-objective Sequence Alignment
grant.Provided by PTCRIS: 98674
 Stichting Weten

Contract

Designation Funders
2019/06/18 - 2022/06/18 D4 - Deep Drug Discovery and Deployment
C492608778-00087672
Researcher
Universidade de Coimbra Centro de Informatica e Sistemas, Portugal
Concluded
2015/08 - 2018/09 An AI-based E-learning modules in Dotnetnuke platform
000000
0and1 Information Technology - R&D department (researcher and consultant in AI solutions)
2005/06 - 2011/01 E-learning Management System for University of Tehran
000000
0and1 Information Technology - R&D department (researcher and consultant in AI solutions)
Outputs

Publications

Book chapter
  1. Martins, Pedro; Tomé, Paulo; Wanzeller, Cristina; Sá, Filipe; Abbasi, Maryam. Corresponding author: Abbasi, Maryam. "NoSQL Comparative Performance Study". In Trends and Applications in Information Systems and Technologies, 428-438. Springer International Publishing, 2021.
    10.1007/978-3-030-72651-5_41
  2. Martins, Pedro; Abbasi, Maryam; Sá, Filipe; Nascimento, Bruno; Santos, Rui; Henriques, João; Abbasi, Maryam; et al. Corresponding author: Martins, Pedro. "A Study over NoSQL Performance". In New Knowledge in Information Systems and Technologies, 603-611. Springer International Publishing, 2019.
    10.1007/978-3-030-16181-1_57
  3. Abbasi, Maryam; Sá, Filipe; Albuquerque, Daniel; Wanzeller, Cristina; Caldeira, Filipe; Tomé, Paulo; Furtado, Pedro; Martins, Pedro. Corresponding author: Abbasi, Maryam. "NoSQL Scalability Performance Evaluation over Cassandra". In Information Systems and Technologies to Support Learning, 512-520. Springer International Publishing, 2018.
    10.1007/978-3-030-03577-8_56
  4. Abbasi, Maryam; Martins, Pedro; Cecílio, José; Costa, João; Furtado, Pedro. Corresponding author: Martins, Pedro. "SINGLE vs. MapReduce vs. Relational: Predicting Query Execution Time". In Beyond Databases, Architectures and Structures. Facing the Challenges of Data Proliferation and Growing Variety, 63-74. Springer International Publishing, 2018.
    10.1007/978-3-319-99987-6_5
  5. Martins, Pedro; Abbasi, Maryam; Cecílio, José; Furtado, Pedro. Corresponding author: Martins, Pedro. "Integrating Map-Reduce and Stream-Processing for Efficiency (MRSP)". In Beyond Databases, Architectures and Structures. Towards Efficient Solutions for Data Analysis and Knowledge Representation, 3-15. Springer International Publishing, 2017.
    10.1007/978-3-319-58274-0_1
  6. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. "AScale: Auto-Scale in and out ETL+Q Framework". In Beyond Databases, Architectures and Structures. Advanced Technologies for Data Mining and Knowledge Discovery, 303-314. Cham: Springer International Publishing, 2016.
    Published • 10.1007/978-3-319-34099-9_24
  7. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "AScale: Big/Small Data ETL and Real-Time Data Freshness". In Beyond Databases, Architectures and Structures. Advanced Technologies for Data Mining and Knowledge Discovery, 315-327. Cham: Springer International Publishing, 2016.
    Published • 10.1007/978-3-319-34099-9_25
  8. Martins, Pedro; Cecílio, José; Abbasi, Maryam; Furtado, Pedro. "GISB: A Benchmark for Geographic Map Information Extraction". In Beyond Databases, Architectures and Structures. Advanced Technologies for Data Mining and Knowledge Discovery, 600-609. Cham: Springer International Publishing, 2016.
    Published • 10.1007/978-3-319-34099-9_46
  9. Abbasi, M.; Paquete, L.; Pereira, F.B.. "Local search for multiobjective multiple sequence alignment". In International Journal of Database Management Systems. 2015.
    10.1007/978-3-319-16480-9_18
  10. Abbasi, Maryam. "AutoScale: Automatic ETL Scale Process". 20-27. Springer International Publishing, 2015.
    10.1007/978-3-319-23201-0_3
Conference abstract
  1. Paquete, Luís; Abbasi, M.; Pinheiro, M.; Matias, P.. "Algorithms for multiobjective sequence alignment". Paper presented in 2nd Workshop on Bio-Optimization, Lisbon, 2012.
    Published
  2. Abbasi, Maryam; Paquete, Luís; Pinheiro, Miguel. "Dynamic programming algorithms for biobjective sequence alignment". Paper presented in Bioinformatics Open Days, Braga, 2012.
    Published
  3. Paquete, Luís; Abbasi, M.; Pinheiro, M.; Matias, P.. "Algorithms and applications of biobjective pairwise sequence alignment". Paper presented in Mini EURO Conference on Computational Biology, Bioinformatics and Medicine (EURO-CBBM 2012), Nottignham, 2012.
    Published
  4. Abbasi, Maryam; Paquete, Luís; Liefooghe, Arnaud; Dias, M.C. "Multiobjective sequence alignment: Formulation and algorithms". Paper presented in The 19th International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, 2011.
    Published
Conference paper
  1. Nelson R. C. Monteiro; Abbasi, Maryam; Ana Catarina Machado; Joel P. Arrais. Corresponding author: Nelson R. C. Monteiro. "Multi-Optimized Drug Design using Transformers". Paper presented in 28th Portuguese Conference on Pattern Recognition (RECPAD2022), leiria, 2022.
  2. Carvalho, F.G.; Abbasi, M.; Ribeiro, B.; Arrais, J.P.. "Deep Model for Anticancer Drug Response through Genomic Profiles and Compound Structures". 2022.
    10.1109/CBMS55023.2022.00050
  3. Beatriz P. Santos; Abbasi, Maryam; Bernardete Ribeiro; Arrais, Joel. "Improvement on Generative Adversarial Network for Targeted Drug Design". 2021.
    10.14428/esann/2021.es2021-96
  4. Abbasi, Maryam; Oliveira Pereira, Tiago; Santos, Beatriz P.; Ribeiro, Bernardete; Arrais, Joel. Corresponding author: Abbasi, Maryam. "Multiobjective Reinforcement Learning in Optimized Drug Design". 2021.
    10.14428/esann/2021.es2021-87
  5. Beatriz P. Santos; Abbasi, Maryam; Tiago Pereira; Ribeiro, Bernardete; Joel P. Arrais. Corresponding author: Abbasi, Maryam. "Optimizing Recurrent Neural Network Architectures for De Novo Drug Design". 2021.
    10.1109/cbms52027.2021.00067
  6. Oliveira Pereira, Tiago; Abbasi, Maryam; Ribeiro, Bernardete; P. Arrais, Joel. Corresponding author: Abbasi, Maryam. "End-to-end Deep Reinforcement Learning for Targeted Drug Generation". Paper presented in International Conference on Computational Biology and Bioinformatics, 2020.
    10.1145/3449258.3449260
  7. Martins, Pedro; Abbasi, Maryam; Martins, P.; Abbasi, M.. "End to end distance measurement algorithms in biology sequences". 2020.
    10.23919/cisti49556.2020.9140975
  8. Martins, P.; Sa, F.; Wanzeller, C.; Abbasi, M.; Martins, Pedro; Sa, Filipe; Wanzeller, Cristina; Abbasi, Maryam. "A performance study on different data load methods in relational databases". 2019.
    10.23919/CISTI.2019.8760615
  9. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "AScale: Simple and fast ETL+ Q scaling for small and big data". Paper presented in The Second International Conference on Big Data, Small Data, Linked Data and Open Data ALLDATA 2016, 2016.
    Published
  10. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "Near-Real-Time Parallel ETL+Q for Automatic Scalability in Bigdata". 2016.
    10.5121/csit.2016.60118
  11. Martins, Pedro; Cecílio, José; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "GPII: A Benchmark for Generic Purpose Image Information". Paper presented in The Ninth International Conference on Computer Science & Software Engineering (C3S2E 2016), Porto, Portugal, 2016.
    10.1145/2948992.2949009
  12. Martins, Pedro; Abbasi, Maryam; pedro furtao. "Efficient ETL+Q for Automatic Scalability in Big or Small Data Scenarios". Paper presented in The Tenth International Conference on Software Engineering Advances, ICSEA 2015, barcelona, 2015.
  13. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. "AuDy: Automatic Dynamic Least-Weight Balancing for Stream Workloads Scalability". Paper presented in 2014 IEEE International Congress on Big Data (BigData Congress), Anchorage, AK, USA, 2014.
    Published • 10.1109/BigData.Congress.2014.33
  14. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. "Cloudy". Paper presented in the 17th International Database Engineering & Applications Symposium, Barcelona, Spain, 2013.
    Published • 10.1145/2513591.2513659
  15. Abbasi, Maryam; Paquete, Luís; Pereira, Francisco B.; Schenker, Sebastian. "Local search for bicriteria multiple sequence alignment". Paper presented in German Conference on Bioinformatics (GCB2013), Göttingen, 2013.
    Published
Journal article
  1. Tiago O. Pereira; Maryam Abbasi; Joel P. Arrais. "ABIET: An explainable transformer for identifying functional groups in biological active molecules". Computers in Biology and Medicine (2025): https://doi.org/10.1016/j.compbiomed.2025.109740.
    10.1016/j.compbiomed.2025.109740
  2. Abbasi, Maryam; Filipa G. Carvalho; Bernardete Ribeiro; Joel P. Arrais. Corresponding author: Abbasi, Maryam. "Predicting drug activity against cancer through genomic profiles and SMILES". Artificial Intelligence in Medicine (2024): https://doi.org/10.1016/j.artmed.2024.102820.
    10.1016/j.artmed.2024.102820
  3. Tiago O. Pereira; Abbasi, Maryam; Rita I. Oliveira; Romina A. Guedes; Jorge A. R. Salvador; Joel P. Arrais. "Artificial intelligence for prediction of biological activities and generation of molecular hits using stereochemical information". Journal of Computer-Aided Molecular Design (2023): http://dx.doi.org/10.1007/s10822-023-00539-9.
    10.1007/s10822-023-00539-9
  4. Monteiro, N.R.C.; Pereira, T.O.; Machado, A.C.D.; Oliveira, J.L.; Abbasi, M.; Arrais, J.P.; Nelson R.C. Monteiro; et al. Corresponding author: Nelson R. C. Monteiro. "FSM-DDTR: End-to-end feedback strategy for multi-objective De Novo drug design using transformers". Computers in Biology and Medicine 164 (2023): http://www.scopus.com/inward/record.url?eid=2-s2.0-85166663400&partnerID=MN8TOARS.
    Published • 10.1016/j.compbiomed.2023.107285
  5. Pereira T; Abbasi M; Oliveira RI; Guedes RA; Salvador JAR; Arrais JP. "Deep generative model for therapeutic targets using transcriptomic disease-associated data-USP7 case study.". Briefings in bioinformatics (2022): http://europepmc.org/abstract/med/35789255.
    10.1093/bib/bbac270
  6. Monteiro, Nelson R. C.; Simões, Carlos J. V.; Ávila, Henrique V.; Abbasi, Maryam; Oliveira, José L.; Arrais, Joel P.; Monteiro NRC; et al. Corresponding author: Monteiro, Nelson R. C.. "Explainable deep drug–target representations for binding affinity prediction". BMC Bioinformatics 23 1 (2022): http://dx.doi.org/10.1186/s12859-022-04767-y.
    10.1186/s12859-022-04767-y
  7. Abbasi M; Santos BP; Pereira TC; Sofia R; Monteiro NRC; Simões CJV; Brito RMM; et al. "Designing optimized drug candidates with Generative Adversarial Network.". Journal of cheminformatics (2022): http://europepmc.org/abstract/med/35754029.
    10.1186/s13321-022-00623-6
  8. Tiago Oliveira Pereira; Abbasi, Maryam; José Luis Guimarães Oliveira; Ribeiro, Bernardete; Joel P. Arrais. Corresponding author: Abbasi, Maryam. "Optimizing blood-brain barrier permeation through deep reinforcement learning for de novo drug design". Bioinformatics 37 Supplement (2021): i84-i92. http://dx.doi.org/10.1093/bioinformatics/btab301.
    10.1093/bioinformatics/btab301
  9. Pereira, Tiago; Abbasi, Maryam; Ribeiro, Bernardete; Arrais, Joel P.. Corresponding author: Abbasi, Maryam. "Diversity oriented Deep Reinforcement Learning for targeted molecule generation". Journal of Cheminformatics 13 1 (2021): http://dx.doi.org/10.1186/s13321-021-00498-z.
    10.1186/s13321-021-00498-z
  10. Martins, Pedro; Abbasi, Maryam; Sá, Filipe; Cecílio, José; Morgado, Francisco; Caldeira, Filipe. Corresponding author: Martins, Pedro. "Improving bluetooth beacon-based indoor location and fingerprinting". Journal of Ambient Intelligence and Humanized Computing 11 10 (2019): 3907-3919. http://dx.doi.org/10.1007/s12652-019-01626-2.
    10.1007/s12652-019-01626-2
  11. Martins, Pedro; Abbasi, Maryam; Sa, Filipe; Celiclio, Jose; Morgado, Francisco; Caldeira, Filipe; Abbasi, Maryam. Corresponding author: Martins, Pedro. "Intelligent beacon location and fingerprinting". Procedia Computer Science 151 (2019): 9-16. http://dx.doi.org/10.1016/j.procs.2019.04.005.
    10.1016/j.procs.2019.04.005
  12. Martins, Pedro; Cruz, Igor; Cecìlio, Josè; Furtado, Pedro; Abbasi, Maryam. Corresponding author: Martins, Pedro. "Approaches for image segmentation applied to food". International Journal of Applied Pattern Recognition 4 2 (2017): 161. http://dx.doi.org/10.1504/ijapr.2017.085330.
    10.1504/ijapr.2017.085330
  13. Martins, Pedro; Abbasi, Maryam. Corresponding author: Martins, Pedro. "Elastic Performance For ETL+Q Processing". International Journal of Database Management Systems 8 1 (2016): 13-28. http://dx.doi.org/10.5121/ijdms.2016.8102.
    10.5121/ijdms.2016.8102
  14. Abbasi, Maryam; Paquete, Luís; Pereira, Francisco B.; Abbasi, Maryam. "Heuristics for multiobjective multiple sequence alignment". BioMedical Engineering OnLine 15 S1 (2016): 70-78. http://dx.doi.org/10.1186/s12938-016-0184-z.
    Published • 10.1186/s12938-016-0184-z
  15. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "Data warehouse ETL+Q auto-scale framework". International Journal of Business Intelligence and Systems Engineering 1 1 (2016): 49. http://dx.doi.org/10.1504/ijbise.2016.081592.
    10.1504/ijbise.2016.081592
  16. Martins, Pedro; Abbasi, Maryam; Furtado, Pedro. Corresponding author: Martins, Pedro. "AScale: automatically scaling the ETL+Q process for performance". International Journal of Business Process Integration and Management 7 4 (2015): 300-300. http://dx.doi.org/10.1504/ijbpim.2015.073659.
    Published • 10.1504/ijbpim.2015.073659
  17. Paquete, Luís; Matias, Pedro; Abbasi, Maryam; Pinheiro, Miguel. Corresponding author: Paquete, Luís. "MOSAL: software tools for multiobjective sequence alignment". Source Code for Biology and Medicine 9 1 (2014): http://dx.doi.org/10.1186/1751-0473-9-2.
    10.1186/1751-0473-9-2
  18. Abbasi, Maryam; Paquete, Luís; Liefooghe, Arnaud; Pinheiro, Miguel; Matias, Pedro. "Improvements on bicriteria pairwise sequence alignment: algorithms and applications". Bioinformatics 29 8 (2013): 996-1003. http://dx.doi.org/10.1093/bioinformatics/btt098.
    10.1093/bioinformatics/btt098
Thesis / Dissertation
  1. Abbasi, Maryam; Abbasi, Maryam. "Multiobjective Sequence Alignment Formulation, Algorithms and Application". PhD, Universidade de Coimbra Departamento de Engenharia Informática, 2019. http://hdl.handle.net/10316/87604.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2022/04/23 Invited Speaker with the presentation entitled “The challenges of using Generative Deep Learning for de novo drug discovery” at the 4th Retreat Neuroscience and Disease of Centre for Innovative Biomedicine and Biotechnology (CIBB), Coimbra, 23 May 2022 4th Retreat Neuroscience and Disease of Centre for Innovative Biomedicine and Biotechnology (CIBB), Coimbra,
(coimbra, Portugal)
2021/06/09 Reinforcement Learning with Multi-Objective Optimization in Targeted Drug Design 55th Annual Scientific Meeting - ESCI Virtual 2021
(Belgium)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2021/01/01 - 2025/01/01 Deep Learning in Drug Design: Application and Algorithms
Co-supervisor
Universidade de Coimbra Centro de Informatica e Sistemas, Portugal
2022/09 - 2022/09 Deep Modelling for Anticancer Drug Response Prediction with Therapeutic Data
Supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2021/09/01 - 2022/08/31 VARIANT - Predict the effect of genetic variants on a given drug
Co-supervisor
Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2021/09/01 - 2022/08/31 Docking based strategy for the evaluation of deep learning generative models
Supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2021/09/01 - 2022/08/31 LSTM based SMILES Generator for Cancer Drugs
Supervisor
 Projecto (Other)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2021/09 - 2022/07/31 Docking based strategies for the validation of deep learning generative models - And the search for novel ligands for A2aR, JAK2, KOR AND USP7.
Supervisor
 Bioquímica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2021/09/01 - 2022/07/28 Deep Modelling for Anticancer Drug Response Prediction with Therapeutic Data
Supervisor
 Mesterado (Master)
Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2020/02 - 2022/07 Docking based strategies for the validation of deep learning generative models - And the search for novel ligands for A2aR, JAK2, KOR AND USP7.
Supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2022 - 2022 End-to-End Transformer-based Approach for Optimized De Novo Drug Design
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2020/09/30 - 2021/09/09 Drug Discovery with Generative Adversarial Networks
Co-supervisor
Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2020/09 - 2021/07 Multi-Objective Deep Reinforcement Learning in Drug Discovery
Supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2019/09 - 2020/07 Recurrent Models for Drug Generation
Co-supervisor
 Engenharia Informática (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2020 - 2020 Neural networks for 2D representations of cell expression
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2019/01/01 - 2019/07/30 Generative Models for Drug Discovery
Co-supervisor
Universidade de Coimbra Centro de Informatica e Sistemas, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2020/10/01 - 2020/10/15 Member of organizer of Summer School in Computational Biology 2020 (2020/10/01 - 2020/10/15)
Workshop (Member of the Organising Committee)
 Universidade de Coimbra, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2015/07 - Current Participation awarded with grant in 1st KEYSTONE Training School Keyword Search over Big Data, 20-24 July 2015, Faculty of ICT, University of Malta, Malta 1st KEYSTONE Training School
Université de Sherbrooke Bibliothèque Roger-Maltais, Canada
2016/05/05 - 2016/05/15 Participation in Computational Biology Summer School, September 5-15, 2016, Coim- bra, Portugal.
Universidade de Coimbra Departamento de Física, Portugal
2013/06/10 - 2013/06/16 Participation in the Artificial Evolution Summer School (AESS2013) on Evolutionary algorithms, metaheuristics, Continuous and combinatorial optimization, 10–14 June 2013, Quiberon, France Artificial Evolution Summer School (AESS2013)
2006/07 - 2006/08 Participation in the USU-CMU Summer School on Dependable Computer Systems Università della SvizzeraUniversità

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2022/09 - Current Inteligência Artificial (Licenciatura) Instituto Superior Miguel Torga, Portugal
2022/09 - Current Sistemas Operativos (Licenciatura) Instituto Superior Miguel Torga, Portugal
2022/09 - Current Sistemas de Apoio à Decisão Instituto Superior Miguel Torga, Portugal
2022/09 - Current Qualidade em Sistemas de Informação (Licenciatura) Instituto Superior Miguel Torga, Portugal
2022/09 - Current Introdução à Programação (Licenciatura) Instituto Politécnico de Coimbra Instituto Superior de Engenharia de Coimbra, Portugal
2022/03/01 - 2022/07/30 segurança Informática Seguranca Informatica (Bacharelato) Instituto Superior de Contabilidade e Administração de Coimbra , Portugal
2021/09/01 - 2022/02/15 Teoria da Informaçao Teoria da Informaçao (Bacharelato) Universidade de Coimbra Departamento de Engenharia Informática, Portugal
2020/09/15 - 2021/02/28 Compiladores (Bacharelato) Universidade de Coimbra Centro de Informatica e Sistemas, Portugal
2007/09 - 2010/09 tic Data Base, Data simulation, Data Storage & Retrieval, Computer Graphics and Neural Networks (Licence)

Scientific expedition

Activity description Institution / Organization
2004/09 - 2005/09 Member of the UTGA Team (University of Tehran Genetic Algorithms team) Working on Bio-Inspired Computing techniques. Implementation of "Genetic Algorithms" under supervision of Professor ¿Ali Masoudi-Nejad
Distinctions

Award

2004 computer science graduate school
1998 National Olympiad in Physics
1998 National Olympiad in Informatics

Other distinction

2022 Recommendation from 0and1 (https://bit.ly/3YVKmqP)
0and1 Information Technology (on the department of AI solutions), Iran