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João M. Neto is a biologist focused on coastal and marine ecosystems. His background began at the University of Coimbra (Portugal), through areas as diverse as the dynamics of macroinvertebrate communities, nutrient mass balance in estuaries and seagrass meadows, and saltmarsh dynamics. Those different research fields improved his knowledge of ecological modeling, eutrophication processes, and restoration and management of estuarine systems, which were the basis of his Ph.D. research (Coimbra, Portugal). His participation in several international projects, and his cooperation with foreign research institutions and Universities, allowed him to increase his know-how and experience in the management of catchment basins and coastal systems. During the latest years, he has been involved in the Water Framework Directive implementation in Europe, namely in developing and harmonizing tools for the assessment of the ecological quality of aquatic systems, through the intercalibration exercise. Apart from his participation in macroinvertebrate, phytoplankton, and fish fauna biological quality elements, he was the coordinator on the Northeast Atlantic Geographical Intercalibration Group of the Macroalgae and Angiosperms working group, for coastal waters, and for Angiosperms (seagrass and saltmarsh), for transitional waters. He has been also involved in European research projects in the scope of the Marine Strategy Framework Directive, particularly in developing new assessment tools and monitoring issues. Presently he is contracted at the University of Coimbra as a Researcher in the Department of Life Sciences, developing his work at the research centre MARE - Marine and Environmental Sciences Centre, and at ARNET - Aquatic Research Network, in Coimbra (MARE-UC) and Figueira da Foz (MAREFOZ - Marine Ecosystems Lab), aiming the integration of the ecological processes involved in estuarine and coastal systems. João M. Neto is the scientific coordinator of MAREFOZ - Marine Ecosystems Lab, he integrates the GLOBE Portugal Advisory Board (Science: Ocean & Atmosphere), is representative of the University of Coimbra in the Strategic Council of the Natural Reserve of Berlengas (CERNB), integrated into the Academic party of the Council Elements, is member of the core Marine Group of SIBECOL (Iberian Society of Ecology), and is collaborator of the UC.Space working group in the University of Coimbra.
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Identification

Personal identification

Full name
João M Neto

Citation names

  • Neto, João M.

Author identifiers

Ciência ID
4213-127C-A1FB
ORCID iD
0000-0002-9033-3671
Google Scholar ID
ZB-rTSEAAAAJ
Researcher Id
F-1159-2013
Scopus Author Id
55950022600

Email addresses

  • jneto@ci.uc.pt (Professional)

Telephones

Telephone
  • 239240700 Ext.: 262286 (Professional)

Addresses

  • MARE - Marine and Environmental Research Centre / ARNET - Aquatic Research Network, Department of Life Sciences, University of Coimbra; Calçada Martim de Freitas, 3000-456, Coimbra, Coimbra, Portugal (Professional)

Websites

  • ORCID: 0000-0002-9033-3671; ResearcherID: F-1159-2013; Scopus Author ID: 55950022600; Webpage: https://www.mare-centre.pt/pt/user/78 (Professional)

Knowledge fields

  • Natural sciences - Biological Sciences - Ecology

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
French Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Spanish; Castilian Advanced (C1) Advanced (C1) Intermediate (B1) Advanced (C1)
Portuguese (Mother tongue)
Education
Degree Classification
2014/06/21 - 2014/06/25
Concluded
 Aquatic Organisms (Aquatic Organisms Bioterium - BOGA) (Outros)
Major in Laboratory Animal Sciences
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2004/11/12
Concluded
 Biologia (Doutoramento)
Major in Especialidade: Ecologia
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
"Nutrient Enrichment in a Temperate Macro-tidal System. Scenario Analysis and Contribution to Coastal Management" (THESIS/DISSERTATION)
 M.Bom c/ Louvor e Distinção
2000/01/07
Concluded
 Ecologia (Mestrado)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
"Variação espadial e temporal dos moluscos do subtidal rochoso da Ilha da Berlenga." (THESIS/DISSERTATION)
 Muito Bom
1995/07/14
Concluded
 Biologia (Licenciatura)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
 Bom (15)
Affiliation

Science

Category
Host institution 		Employer
2019/02/01 - Current Contracted Researcher (Research) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
MARE - Marine and Environmental Sciences Centre, Portugal
2017/12/01 - 2019/01/31 Contracted Researcher (Research) Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
MARE - Marine and Environmental Sciences Centre, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2014/03/02 - 2014/09/02 Invited Assistant Professor (University Teacher) Universidade do Minho, Portugal
Universidade do Minho Departamento de Biologia, Portugal

Others

Category
Host institution 		Employer
2015/07/01 - 2017/11/30 Invited Researcher at University of Coimbra (Development of the research area of Ecological Quality Status (EQS) Assessment in Transitional and Coastal Waters) Universidade de Coimbra, Portugal
MARE - Marine and Environmental Sciences Centre, Portugal
2015/04/01 - 2015/06/30 Researcher at University of Lisbon (Fundação da Faculdade de Ciências da Universidade de Lisboa), to develop and fine tune assessment tools applicable to the Sub-Biological Quality Element – Saltmars Universidade de Lisboa Faculdade de Ciências, Portugal
MARE - Marine and Environmental Sciences Centre, Portugal
2014/10/01 - 2015/02/28 Invited Researcher at University of Coimbra, to develop the research area of Ecological Quality Status (EQS) Assessment in Transitional and Coastal Waters. MARE - Marine and Environmental Sciences Centre, Portugal
2009/07/01 - 2014/06/30 Associate researcher under the scope of the ‘Ciência 2008’ initiative from FCT (Fundação para a Ciência e a Tecnologia), in the area of Ecological Quality Status (EQS) Assessment IMAR - Institute of Marine Research (CMA), Portugal
2005/07/19 - 2010/06/30 Foundation Partner/manager of environmental consulting company. ECOMOD – Environmental Consulting and Modelling, Portugal
Projects

Grant

Designation Funders
2014/08 - 2017/07 Modelagem ecológica do estuário do Rio Mamanguape, PB: uma ferramenta de gestão e manejo
Ciência Sem Fronteiras – Pesquisador Visitante Especial Nº 03/2014
Ciência Sem Fronteiras Pesquisador Visitante Especial Nº 03/2014
Invited Scientist Fellow
IMAR - Institute of Marine Research (CMA), Portugal

MARE - Marine and Environmental Sciences Centre, Portugal
MEC/MCTI
2011/01 - 2013/12 Projecto Estratégico - UI 284 - 2011-2012
123495UID
 Fundação para a Ciência e a Tecnologia
2008/07 - 2009/06 APPLICATION OF THE DPSIR FRAMEWORK AND ENVIRONMENTAL INTEGRATIVE INDICATORS IN DEVELOPING MANAGEMENT TOOLS FOR THE MONDEGO ESTUARY ECOSYSTEM PORTUGAL
24595DFA
 Fundação para a Ciência e a Tecnologia
2005/07 - 2008/06 THE IMPORTANCE OF SEDIMENT SURFACE BIOSTABILITY ON EROSION THRESHOLDS N BARE BOTTOM COHESIVE ESTUARINE SEDIMENTS
17299DFA
 Fundação para a Ciência e a Tecnologia
2003 - 2005 MEDECORE - From river catchement areas to the sea: a comparative and integrated approach to the ecology of Mediterranean coastal zones for sustainable management.
ICA3 2002-10003
Post-doc Fellow
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
1999/01 - 2002/12 REQUALIFICAÇÃO DO BRAÇO SUL DO ESTUÁRIO DO MONDEGO: CONTRIBUIÇÃO PARA A GESTÃO AMBIENTAL DE UM HABITAT PROTEGIDO ZOSTERA NOLTII
7742DFA
 Fundação para a Ciência e a Tecnologia
1998 - 1999 Marine Science and Technology Programe: Feed-backs of estuarine circulation and transport of sediments on phytobenthos.
MAS 3 - CT97 - 0145
Research Fellow
IMAR - Institute of Marine Research (CMA), Portugal
1996/01 - 1997/12 ESTRUTURA TRÓFICA DO POVOAMENTO DE SPARTINA MARÍTIMA DO ESTUÁRIO DO RIO MONDEGO PORTUGAL
3516DFA
 Fundação para a Ciência e a Tecnologia

Contract

Designation Funders
2021/01/01 - 2025/12/31 ARNET - Aquatic Research Network
LA/P/0069/2020
10.54499/LA/P/0069/2020
Universidade do Minho, Portugal

Instituto Politécnico de Leiria, Portugal

Universidade do Algarve, Portugal

Universidade Nova de Lisboa, Portugal

Instituto Universitário de Ciências Psicológicas Sociais e da Vida, Portugal

FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal

Universidade de Coimbra, Portugal

Universidade de Lisboa Faculdade de Ciências, Portugal

Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Universidade de Évora, Portugal

Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação, Portugal

Centro de Ciências do Mar e do Ambiente, Portugal

Universidade Nova de Lisboa Associação para a Inovação e Desenvolvimento da FCT, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019 - 2024 LIFE - ADAPTA BLUES - Adaptation to climate change through management and restoration of European estuarine ecosystems.
LIFE18 CCA/ES/001160
Co-PI (Principal Investigator at Polytechnic of Leiria)
Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
 Executive Agency for Small and Medium-sized Enterprises
Ongoing
2019/09 - 2022/08 TRASMARES - Specialized training on applied tools for sustainable marine ecosystems (ERASMUS+)
2019-1-ES01-KA203-065536
Co-PI (Principal Investigator at University of Coimbra)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal

MARE - Marine and Environmental Sciences Centre, Portugal
Ongoing
2019 - 2022 ALBUFEIRA - Programa de evaluación conjunta de las masas de agua de las cuencas hidrográficas hispano-portuguesas (0489_ALBUFEIRA_6_E).
0489_ALBUFEIRA_6_E
Co-PI (Principal Investigator at Polytechnic of Leiria)
Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
Ongoing
2018/07/01 - 2021/06/30 MARINE INVADERS - O impacto e mecanismos de sucesso da alga marinha invasora Asparagopsis armata em ambientes costeiros
PTDC/BIA-CBI/31144/2017
Researcher
Instituto Politécnico de Leiria, Portugal

Universidade de Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019 - 2021 SCI-DIVE - Especialização em Mergulho Científico
FEAMP-0178
Principal investigator
Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
Ongoing
2019 - 2021 MACAU - Diversidade Macroalgalda Reserva Natural das Berlengas e Costa Adjacente, do Conhecimento à Utilização
FEAMP-0128
Principal investigator
Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
2017 - 2020 PORBIOTA - E-Infraestrutura Portuguesa de Informação e Investigação em Biodiversidade
Mar2020 (POCI-01-0145-FEDER-022127)
Researcher
Centro Hospitalar e Universitário de Coimbra EPE, Portugal

MARE - Marine and Environmental Sciences Centre, Portugal
Concluded
2017 - 2019 AMALIA - Algae-to-MArket Lab IdeAs” Adding value to marine invasive seaweeds of the Iberian northwest
EASME/EMFF/2016/1.2.1.4
Researcher
MARE - Marine and Environmental Sciences Centre, Portugal
 European Maritime and Fisheries Fund
Concluded
2014/01 - 2016/12 MEBEM - Mamanguape Estuary: biological Baseline and Ecological Model
Chamada Pública Nº 14/2013 - Proc. 486881/2013-0
Principal investigator
MCTI/CNPq
2012 - 2016 DEVelopment Of innovative Tools for understanding marine biodiversity and assessing good Environmental Status - DEVOTES
Grant agreement ID: 308392
Researcher
Universidade de Coimbra, Portugal
Concluded
2011/09/01 - 2014/12/31 3M_RECITAL - MINHO, MONDEGO, AND MIRA ESTUARIES observatory: Long term vaRiation of ECOLOGICAL sTAtus as a response to naturaL and human induced changes. implications for management and restoration
LTER/BIA-BEC/0019/2009
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal

Instituto Português do Mar e da Atmosfera, Portugal

Instituto Nacional de Investigação Agrária e Veterinária, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade de Coimbra, Portugal

Instituto do Mar, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/03/01 - 2014/02/28 INPACTAR- Efeitos a longo prazo da intersexualidade e outros impactos em populações de Echinogammarus marinus
PTDC/MAR/111537/2009
Researcher
Universidade de Coimbra, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2011/01/01 - 2013/12/31 Strategic Project - UI 284 - 2011-2012
PEst-C/MAR/UI0284/2011
Universidade de Évora, Portugal

Universidade de Coimbra, Portugal

Universidade do Algarve, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2008/11/01 - 2012/04/30 Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and investigating phylogeographic patterns
PTDC/MAR/69892/2006
Universidade do Minho, Portugal

Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal

Instituto Português do Mar e da Atmosfera, Portugal

Universidade de Aveiro, Portugal

Universidade dos Açores, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2008/09/01 - 2012/03/31 Resposta dinâmica do sistema a um amplo restabelecimento artificial da ligação a montante entre os dois braços do estuário do Mondego (Portugal): Implicações para a recuperação, estado ecológico e gestão
PTDC/MAR/64627/2006
Researcher
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2009 - 2012 Water bodies in Europe: Integrative Systems to assess Ecological status and Recovery – WISER
Proposal/Contract nº FP7-ENV-2008-1
Researcher
MARE - Marine and Environmental Sciences Centre, Portugal
Concluded
2008 - 2012 MODERN (MObility, Development and Energy use ReductioN)
Grant Agreement no.: 219041
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
2008 - 2010 Effects of extreme freshwater input fluctuations on the ecological status assessment in estuarine ecosystem: The benthic perspective – EXTREMIS
Instituto de Investigação Interdisciplinar, University of Coimbra
Researcher
2005/09/01 - 2008/08/31 Efeitos dos caudais dulciaquícolas sobre as comunidades de invertebrados macrobentónicos, na perspectiva da avaliação da qualidade ecológica dos estuários - EFICAS
POCI/MAR/61324/2004
Researcher
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2008 - 2008 Rede de Competência em Biónica sobre as Ciências do Mar na Região Centro de Portugal – BIOMA
CCI 2005 PT 16 0 PP 002
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
2005 - 2008 Sustainable management of Mediterranean coastal fresh and transitional water bodies: a socioeconomic and environmental analysis of changes and trends to enhance and sustain stakeholders benefits - WADI.
Proposal/Contract nº 015226
Post-doc
IMAR - Institute of Marine Research (CMA), Portugal
2005 - 2007 MINHO, MONDEGO, AND MIRA ESTUARIES observatory: Long term vaRiation of ECOLOGICAL sTAtus as a response to naturaL and human induced changes. implications for management and restoration - 3M_RECITAL
info:eu-repo/grantAgreement/FCT/3599-PPCDT/109511/PT
Researcher
Universidade do Algarve Faculdade de Ciências e Tecnologia
2000 - 2003 Cross-shore processes on contrasting environments – CROP
PDCTM/MAR/15265/99
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
1998 - 2000 Bases for the integrated sustainable management of Mediterranean sensitive coastal ecosystems.
ERB3514PL972762
Researcher
IMAR - Institute of Marine Research (CMA), Portugal

Other

Designation Funders
2019 - 2020 Aquisição de serviços para melhorar e complementar os critérios de classificação do estado das massas de água de transição e costeiras - MESCLA
POSEUR-03-2013-FC-000001
Principal investigator
Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
 Agência Portuguesa do Ambiente
2015 - 2015 Characterisation of macroinvertebrate communities of subtidal soft bottoms from the western coast of Algarve (Portugal). Species list and quality status assessment.
SAGREMARISCO
Principal investigator
IMAR - Institute of Marine Research (CMA), Portugal
2014 - 2015 Estabelecimento de Sistemas de Classificação, Avaliação do Estado das Massas de Água Costeira e de Transição, desenvolvimento de metodologias para a identificação de Pressões significativas e acompanhamento do Exercício de Intercalibração – Elemento Biológico Macroinvertebrados Bentónicos - EEMA 2
POVT-03-0133-FCOES-000017
Principal investigator
MARE - Marine and Environmental Sciences Centre, Portugal
Concluded
2011 - 2012 Monitorização das comunidades biológicas costeiras e estuarinas, no pós-obra do prolongamento do molhe norte do Porto da Figueira da Foz.
IPTM - Instituto Portuário e dos Transportes Marítimos
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
2010 - 2012 Avaliação do Estado Ecológico das Massas de Água Costeiras e de Transição e do Potencial Ecológico das Massas de Água Fortemente Modificadas – EEMA
Agência Portuguesa do Ambiente
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
2009 - 2010 Monitorização das comunidades biológicas do estuário do Mondego, associada à intervenção do prolongamento do molhe Norte do Porto da Figueira da Foz na fase de obra
IPTM
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
2005 - 2008 Reference conditions and intercalibration of Portuguese coastal and transition waters - RECITAL
contract nº 2005/056/INAG
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
2004 - 2006 Estudo piloto do estuário do Mondego no âmbito da implementação do Programa Objectivos de Qualidade Ambiental Eutrofização (EcoQOs-Eutro-OSPAR) Harmonização dos critérios OSPAR com a Directiva Quadro da Água Europeia.
Contract nº 2004/067/INAG
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
2002 - 2004 Caracterização do estuário do rio Mondego e estabelecimento de cenários de gestão em termos da qualidade da água e da integridade do ecossistema.
INAG - Institute of Water
Researcher
IMAR - Institute of Marine Research (CMA), Portugal
Concluded
1996 - 1998 Caracterização das comunidades bentónicas intertidais e subtidais em substrato rochoso da reserva das Berlengas. (Protocolo IMAR/ICN).
Protocolo IMAR/ICN
Research Fellow
IMAR - Institute of Marine Research (CMA), Portugal
1994 - 1995 Estuário do Mondego: Evolução temporal das comunidades bentónicas e impacto da descarga excessiva de nutrientes
PBIC/C/MAR/1301/92
Estagiário
Fundação para a Ciência e a Tecnologia, Portugal
Concluded
Outputs

Publications

Book
  1. Franco J.N., Lemos M.F.L., Neto J.M.,. Macroalgas das Berlengas e Costa de Prata – Do conhecimento à utilização... Portugal. 2022.
    Published
  2. Pereira, L.; Neto, J.M.. Preface. 2014.
  3. Neto, João M.. Ecological Indicators for Coastal and Estuarine Environmental Assessment. A user guide.. United Kingdom. 2009.
Book chapter
  1. Neto, João M.; et. al.. "Estuários". In Rios de Portugal: comunidades, processos e alterações, 381-421. Imprensa da Universidade de Coimbra, 2019.
    10.14195/978-989-26-1624-7_16
  2. Bessa, F.; Barría, P.; Neto, J.M.; Frias, J.P.G.L.; Otero, V.; Sobral, P.; Marques, J.C.. "Microplastics in Juvenile Commercial Fish from an Estuarine Environment". 131-135. 2018.
    10.1007/978-3-319-71279-6_18
  3. Lima, A.L.; Gaspar, R.; Neto, J.M.; Pereira, L.. "The identification of macroalgae and the assessment of intertidal rocky shores' ecological statuses in the central western coast of continental Portugal". 19-84. 2017.
  4. Marques, J.C.; Salas, F.; Patrício, J.; Neto, J.; Teixeira, H.; Pinto, R.. "Application of ecological indicators for the assessment of ecosystem health in estuaries and coastal zones". 211-261. 2016.
  5. Neto, João M.. "Searching for Ecological Reference Conditions of Marine Macroalgae". 2014.
  6. Neto, J.M.; Juanes, J.A.; Pedersen, A.; Scanlan, C.. "Marine macroalgae and the assessment of ecological conditions". 97-139. 2014.
  7. Neto, João M.. "Bacia do Mondego (Chapter 15).". 2009.
  8. Flindt, Morgens R.; Neto, Joao; Amos, Carl L.; Pardal, Miguel A.; Bergamasco, Alessandro; Pedersen, Cathrine B.; Andersen, Frede ø.. "Plant Bound Nutrient Transport. Mass Transport In Estuaries And Lagoons". In Estuarine Nutrient Cycling: The Influence of Primary Producers, 93-128. Springer Netherlands, 2004.
    10.1007/978-1-4020-3021-5_4
  9. Duarte, António Sampaio; Pinho, José; Pardal, Miguel Ângelo; Neto, João Magalhães; Vieira, José; Santos, Fernando Seabra. "Hydrodynamic modelling for Mondego estuary water quality management". In Aquatic ecology of the Mondego River basin global importance of local experience, 29-42. Imprensa da Universidade de Coimbra, 2002.
    10.14195/978-989-26-0336-0_3
  10. Lillebo, Ana Isabel; Flindt, Mogens René; Pardal, Miguel Ângelo; Martins, Irene; Neto, João Magalhães; Marques, João Carlos. "Nutrient dynamics in the intertidal pools of the Mondego estuary: II - seasonal efflux of PO4-P and NH4-N in bare bottom and vegetated pools". In Aquatic ecology of the Mondego River basin global importance of local experience, 257-272. Imprensa da Universidade de Coimbra, 2002.
    10.14195/978-989-26-0336-0_16
  11. Lillebo, Ana Isabel; Pardal, Miguel Ângelo; Flindt, Mogens René; Neto, João Magalhães; Macedo, Filomena; Martins, Irene; Marques, João Carlos. "Nutrient dynamics in the intertidal pools of the Mondego estuary: IV - possible contribution to dissolved inorganic phosphorus loading". In Aquatic ecology of the Mondego River basin global importance of local experience, 287-300. Imprensa da Universidade de Coimbra, 2002.
    10.14195/978-989-26-0336-0_18
  12. Martins, Irene; Pardal, Miguel Ângelo; Metelo, Inês; Neto, João Magalhães; Oliveira, José Miguel; Marques, João Carlos. "Enteromorpha spp. (ulvales: chlorophyta) growth in the south arm of the Mondego estuary: field growth rates with and without macrofaunal grazer effects". In Aquatic ecology of the Mondego River basin global importance of local experience, 301-312. Imprensa da Universidade de Coimbra, 2002.
    10.14195/978-989-26-0336-0_19
  13. Lillebo, Ana Isabel; Neto, João Magalhães; Pardal, Miguel Ângelo; Flindt, Mogens René; Marques, João Carlos. "The role of Spartina marítima and Scirpus marítimus to dediment pore-water profiles, and possible implications to the Mondego estuary nutrient dynamics". In Aquatic ecology of the Mondego River basin global importance of local experience, 325-338. Imprensa da Universidade de Coimbra, 2002.
    10.14195/978-989-26-0336-0_21
Conference abstract
  1. Fernandes, João; Carlos Gonçalves; Verdelhos, Tiago; Veríssimo, Helena; Neto, João M.. "Restoration of estuarine vegetation under Climate Change conditions ¿ a competition between Sea-Level Rise and migration of saltmarshes". Paper presented in SIBECOL AIL Meeting 2022, Aveiro, 2022.
    Published
  2. João Fernandes, Carlos Gonçalves, Tiago Verdelhos, Helena Veríssimo, João M. Neto. "OC 067: Restoration of estuarine vegetation under Climate Change conditions – a competition between Sea-Level Rise and migration of saltmarshes". Paper presented in 2nd meeting of the Iberian Ecological Society (SIBECOL) and the XXI conference of the Iberian Association of Limnology (AIL), together with with the 21st National Congress of Ecology (Portuguese Ecological Society – SPECO), Aveiro, 2022.
    Published
  3. Neto, J.M., Mazarrasa, I., Bouma, T., Grandjean, T., Recio, M., Fernandes, J., Puente A., Juanes, J.A.. "Adaptation to climate change through management and restoration of European estuarine ecosystems (LIFE ADAPTA BLUES)". Paper presented in 20º Encontro Nacional de Ecologia, Ponte de Lima, 2021.
    Published
  4. Fonseca V.F., Carneiro J., Duarte I., Duarte B., Neto J.M., Gonçalves J., Costa J., Cabral H., Domingos I., Reis-Santos. "Traceability of fish species from estuarine systems via tissue elemental profiling". Paper presented in WFC2021 – World Fisheries Congress, Adelaide, 2021.
    Published
  5. Escribano-Rodríguez M.P., Neto J.M.. "Fish assemblages in northern Portuguese estuaries: Changes in fish guilds along salinity gradients". Paper presented in VIII Congreso ibérico de Ictiología - SIBIC 2020, Santiago de Compostela, 2020.
  6. Feio M.J., Serra S., Neto J.M.. "From headwaters to the estuary: are the longitudinal gradients reflected in the processes and communities?". Paper presented in 1st Meeting of the Iberian Ecological Society / XIV AEET Meeting, Barcelona, 2019.
  7. Neto J.M., Silva C.O., Gaspar R., Novais S., Gonçalves C. & Lemos M.,. "The effects of the invasive Asparagopsis armata on native macroalgal communities: evidences from rock pools exclusion experiments.". Paper presented in 1st Meeting of the Iberian Ecological Society / XIV AEET Meeting, Barcelona, 2019.
  8. Neto J.M.. "Estatística por Lei. Um bom suporte às Directivas ambientais?". Paper presented in XXII Congresso da Sociedade Portuguesa de Estatística (SPE), Olhão, 2015.
  9. Gaspar, R., Neto, J.M., Pereira, L.. "The Use of Biodiversity Surrogates to Describe Intertidal Macroalgae Patterns at Small Spatial and Temporal Scales". Paper presented in ECSA 54, Sesimbra, 2014.
  10. Vinagre, Pedro Almeida; Patricio, Joana; Neto, João M.; Teixeira, Heliana; Ceia, Filipe R.; Franco, João; Marques, João Carlos. "The Mondego estuary (Southwestern Europe) Mesohaline and Oligohaline macrozoobenthic communities. A contribution for their Ecological Quality Status assessment". Paper presented in ECSA47 Symposium, Figueira da Foz, 2010.
    Published
  11. Ceia, Filipe R.; Patricio, Joana; Neto, João M.; Franco, João N.; Pinto, Rute; Fernandez-Boo, Sergio; Losi, Valentina; Marques, João Carlos. "The influence of dredging in macrobenthic assemblages and environmental quality assessment in the Mondego Estuary (Portugal)". Paper presented in ECSA47 ¿ Estuarine and Coastal Sciences Association Symposium, Figueira da Foz, 2010.
    Published
  12. Pardal, M., J.C. Marques, A. Lillebø, J.M. Neto, Patrícia Cardoso, Susana Ferreira. "Qualidade ambiental no estuário do Mondego: Duas décadas de estudos e futuros cenários". Paper presented in Jornadas Litoral 03, 2003.
Conference paper
  1. Duarte, António A. L. Sampaio; Pinho, José L. S.; Pardal, Miguel A. C.; Neto, João M.; Vieira, J. M. Pereira; Santos, Fernando S.. "Hidrodynamics influence assessment on Mondego Estuary eutrophication process". 2002.
Conference poster
  1. Carla O. Silva, João M. Neto, Rui Gaspar, Sara Novais & Marco Lemos. "The effects of the invasive Asparagopsis armata on macroalgae assemblages: evidences from rock pools manipulation". Paper presented in IMMR 2018, 2018.
  2. Ángel Mateo-Ramírez, Tiago Verdelhos, Helena Veríssimo, Alexandra Baeta, João M. Neto, João C. Marques. "Selection of habitat by Carcinus maenas.". Paper presented in The Crustacean Society Mid-Term Meeting, 2017.
  3. Vieira R., Neto J.M., Barría P., Marques L., Marques J.C., Gonçalves F., Gonçalves A.M.M. "Marine Fish Feeding: dietary characterization and preys availability of three marine commercial fish species from a southern European temperate estuary (Mondego estuary, Portugal)". Paper presented in IV Encontro Nacional de Pós-Graduação em Ciências Biológicas, 2016.
  4. Vieira R., Neto J.M., Barría P., Marques L., Marques J.C., Gonçalves F., Gonçalves A.M.M.. "Marine Fish Feeding: dietary characterization and preys availability of three marine commercial fish species from a southern European temperate estuary (Mondego estuary, Portugal)". Paper presented in MARES Conference, 2016.
  5. Fragoso B.D.D., Icely J.D., Nancy O, Moore G., Neto J.M., Danchenko S., Newton A.. "Monitoring approaches for supporting offshore aquaculture management and EU Directives at Sagres". Paper presented in MARES Conference, 2016.
  6. Neto J.M., Barría P., Pais-Costa A.J., Marques L., Vinagre P.A., Fragoso B.D.D, Icely, J.D.. "Impact of coastal mussel farms on the macrobenthic soft bottom community". Paper presented in MARES Conference, 2016.
  7. Castro, Nuno; Costa, José Lino; Neto, João M.; Cabral, Henrique; Marques, João Carlos; Costa, Maria José. "Evolution of the fish communities in the Mondego estuary after the reestablishment of communication between the two arms of the system". Paper presented in Symposium of Marine Sciences, 2013.
  8. Gonçalves, C.I.; Gamito, R.; Fonseca, V.F.; Costa, José Lino; Cabral, Henrique; Erzini, K.; Gonçalves, J.M.S.; et al. "Testing the robustness of the Estuarine Fish Assessment Index (EFAI) applying different water bodies". Paper presented in ELET Symposium, 2011.
  9. Franco, João N; Ceia, Filipe R.; Patricio, Joana; Neto, João M.; Modesto, Vanessa; Marques, João Carlos. "Spatial intrusion and ecological response of Corbicula fluminea (Müller, 1774) in the Mesohaline and Oligohaline areas of a Southern Europe estuary". Paper presented in IMMR´10 ¿ International Meeting on Marine Resources. University of Leiria, Peniche, Portugal., 2010.
Edited book
  1. Neto, João M.. Marine Algae: Biodiversity, Taxonomy, Environmental Assessment, and Biotechnology. 2014.
    10.1201/b17540
Journal article
  1. Maxwell, Tania L.; Rovai, André S.; Adame, Maria Fernanda; Adams, Janine B.; Álvarez-Rogel, José; Austin, William E. N.; Beasy, Kim; et al. "Global dataset of soil organic carbon in tidal marshes". Scientific Data 10 1 (2023): http://dx.doi.org/10.1038/s41597-023-02633-x.
    10.1038/s41597-023-02633-x
  2. Inés Mazarrasa; Joao M. Neto; Tjeerd J. Bouma; Tim Grandjean; Jordi Garcia-Orellana; Pere Masqué; María Recio; et al. "Drivers of variability in Blue Carbon stocks and burial rates across European estuarine habitats". Science of The Total Environment 886 (2023): 163957-163957. http://dx.doi.org/10.1016/j.scitotenv.2023.163957.
    10.1016/j.scitotenv.2023.163957
  3. Duarte, Sofia; Vieira, Pedro E.; Leite, Barbara R.; Teixeira, Marcos A.L.; Neto, João M.; Costa, Filipe O.. "Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding". Estuarine, Coastal and Shelf Science 281 (2023): 108207. http://dx.doi.org/10.1016/j.ecss.2022.108207.
    10.1016/j.ecss.2022.108207
  4. Martinez-Haro, Monica; Acevedo, Pelayo; Pais-Costa, Antónia Juliana; Neto, João M.; Vieira, Luis R.; Ospina-Alvarez, Natalia; Taggart, Mark A.; et al. "Ecotoxicological tools in support of the aims of the European Water Framework Directive: A step towards a more holistic ecosystem-based approach". Ecological Indicators 145 (2022): 109645. http://dx.doi.org/10.1016/j.ecolind.2022.109645.
    10.1016/j.ecolind.2022.109645
  5. Silva, Carla O.; Lemos, Marco F.L.; Gaspar, Rui; Gonçalves, Carlos; Neto, João M.. "The effects of the invasive seaweed Asparagopsis armata on native rock pool communities: Evidences from experimental exclusion". Ecological Indicators 125 (2021): 107463. http://dx.doi.org/10.1016/j.ecolind.2021.107463.
    10.1016/j.ecolind.2021.107463
  6. Maria João Feio; Sónia R. Q. Serra; João M. Neto. "From headwaters into the estuarine zone: changes in processes and invertebrate communities in response to abiotic conditions". Aquatic Ecology (2021): https://doi.org/10.1007/s10452-020-09820-7.
    10.1007/s10452-020-09820-7
  7. Silva, D.C.C.; Neto, J.M.; Nunes, C.; Gonçalves, F.J.M.; Coimbra, M.A.; Marques, J.C.; Gonçalves, A.M.M.. "Assessment of seasonal and spatial variations in the nutritional content of six edible marine bivalve species by the response of a set of integrated biomarkers". Ecological Indicators 124 (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85100013591&partnerID=MN8TOARS.
    10.1016/j.ecolind.2021.107378
  8. Blanco, A.; Larrinaga, A.R.; Neto, J.M.; Troncoso, J.; Méndez, G.; Domínguez-Lapido, P.; Ovejero, A.; et al. "Spotting intruders: Species distribution models for managing invasive intertidal macroalgae". Journal of Environmental Management 281 (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85099221434&partnerID=MN8TOARS.
    10.1016/j.jenvman.2020.111861
  9. Diana Pacheco; Glacio Souza Araújo; João Cotas; Rui Gaspar; João M. Neto; Leonel Pereira. "Invasive Seaweeds in the Iberian Peninsula: A Contribution for Food Supply". Marine Drugs 18 11 (2020): 560-560. https://doi.org/10.3390/md18110560.
    10.3390/md18110560
  10. Blanco, A.; Neto, J.M.; Troncoso, J.; Lemos, M.F.L.; Olabarria, C.. "Effectiveness of two western Iberian Peninsula marine protected areas in reducing the risk of macroalgae invasion". Ecological Indicators 108 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85072247937&partnerID=MN8TOARS.
    10.1016/j.ecolind.2019.105705
  11. Vieira, R.; Marques, S.M.; Neto, J.M.; Barría, P.; Marques, J.C.; Gonçalves, F.J.M.; Gonçalves, A.M.M.. "Brain as a target organ of climate events: Environmental induced biochemical changes in three marine fish species". Ecological Indicators 95 (2018): 815-824. http://dx.doi.org/10.1016/j.ecolind.2018.08.019.
    10.1016/j.ecolind.2018.08.019
  12. Bessa, Filipa; Barría, Pablo; Neto, João M.; Frias, João P.G.L.; Otero, Vanessa; Sobral, Paula; Marques, J.C.. "Occurrence of microplastics in commercial fish from a natural estuarine environment". Marine Pollution Bulletin 128 (2018): 575-584. http://dx.doi.org/10.1016/j.marpolbul.2018.01.044.
    10.1016/j.marpolbul.2018.01.044
  13. Rui Gaspar; Luísa Marques; Lígia Pinto; Alexandra Baeta; Leonel Pereira; Irene Martins; João C. Marques; João M. Neto. "Origin here, impact there—The need of integrated management for river basins and coastal areas". Ecological Indicators 72 (2017): 794-802. https://doi.org/10.1016/j.ecolind.2016.09.013.
    10.1016/j.ecolind.2016.09.013
  14. Duarte, B.; Neto, J.M.; Marques, J.C.; Adams, J.B.; Caçador, I.. "Marine angiosperm indices used to assess ecological status within the Water Framework Directive and South African National Water Act: Learning from differences and common issues". Ecological Indicators 83 (2017): 192-200. http://www.scopus.com/inward/record.url?eid=2-s2.0-85026853473&partnerID=MN8TOARS.
    10.1016/j.ecolind.2017.07.032
  15. Vinagre, P.A.; Pais-Costa, A.J.; Hawkins, S.J.; Borja, Á.; Marques, J.C.; Neto, J.M.. "Addressing a gap in the Water Framework Directive implementation: Rocky shores assessment based on benthic macroinvertebrates". Ecological Indicators 78 (2017): 489-501. http://www.scopus.com/inward/record.url?eid=2-s2.0-85017594437&partnerID=MN8TOARS.
    10.1016/j.ecolind.2017.03.044
  16. Gaspar, R.; Pereira, L.; Neto, J.M.. "Intertidal zonation and latitudinal gradients on macroalgal assemblages: Species, functional groups and thallus morphology approaches". Ecological Indicators 81 (2017): 90-103. http://www.scopus.com/inward/record.url?eid=2-s2.0-85020036739&partnerID=MN8TOARS.
    10.1016/j.ecolind.2017.05.060
  17. Neto, João M.. "Do structural and functional attributes show concordant responses to disturbance? Evidence from rocky shore macroinvertebrate communities". Ecological Indicators (2017):
    10.1016/j.ecolind.2016.12.023
  18. Neto, João M.. "Indicator-Based Assessment of Marine Biological Diversity‚ Lessons from 10 Case Studies across the European Seas". Frontiers Marine Science (2016):
    10.3389/fmars.2016.00159
  19. Pedro Almeida Vinagre; Antónia Juliana Pais-Costa; Rui Gaspar; Ángel Borja; João Carlos Marques; João Magalhães Neto. "Response of macroalgae and macroinvertebrates to anthropogenic disturbance gradients in rocky shores". Ecological Indicators 61 (2016): 850-864. https://doi.org/10.1016/j.ecolind.2015.10.038.
    10.1016/j.ecolind.2015.10.038
  20. Castro, N.; Félix, P.M.; Neto, J.M.; Cabral, H.; Marques, J.C.; Costa, M.J.; Costa, J.L.. "Fish communities' response to implementation of restoring measures in a highly artificialized estuary". Ecological Indicators 67 (2016): 743-752. http://www.scopus.com/inward/record.url?eid=2-s2.0-84962905865&partnerID=MN8TOARS.
    10.1016/j.ecolind.2016.03.040
  21. Vinagre, Pedro Almeida; Pais-Costa, Antonia Juliana; Hawkins, Stephen. J.; Borja, Angel; Marques, Joao Carlos; Magalhaes Neto, Joao. "Ability of invertebrate indices to assess ecological condition on intertidal rocky shores". Ecological Indicators 70 (2016): 255-268. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000388785200023&KeyUID=WOS:000388785200023.
    10.1016/j.ecolind.2016.06.004
  22. Neto, João M.. "Setting reference conditions for mesohaline and oligohaline macroinvertebrate communities sensu WFD: Helping to define achievable scenarios in basin management plans". Ecological Indicators (2015): http://dx.doi.org/10.1016/j.ecolind.2015.04.008.
    10.1016/j.ecolind.2015.04.008
  23. Neto, João M.. "Transitional and freshwater bioassessments: One site, two perspectives?". Marine Pollution Bulletin (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000331423100032&KeyUID=WOS:000331423100032.
    10.1016/marpolbul.2013.10.048
  24. Neto, João M.. "Tales from a thousand and one ways to integrate marine ecosystem components when assessing the environmental status". Frontiers in Marine Science (2014):
    10.3389/fmars.2014.00072
  25. Neto, João M.. "Biological validation of physical coastal waters classification along the NE Atlantic region based on rocky macroalgae distribution". Estuarine, Coastal and Shelf Science (2014):
    10.1016/j.ecss.2014.05.036
  26. Modesto, V.; Franco, J. N.; Sousa, R.; Patricio, J.; Marques, J. C.; Neto, J. M.. "Spatial and temporal dynamics of Corbicula fluminea (Muller, 1774) in relation to environmental variables in the Mondego Estuary (Portugal)". Journal of Molluscan Studies 79 4 (2013): 302-309. http://dx.doi.org/10.1093/mollus/eyt026.
    10.1093/mollus/eyt026
  27. Neto, João M.. "Replying to Domingues et al., Ecological Indicators, 24, 245-255, http://dx.doi.org/10.1016/j.ecolind.2012.06.020". Ecological Indicators 27 (2013): 123-124. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872119420&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.11.019
  28. Neto, João M.. "The usefulness of large body-size macroinvertebrates in the rapid ecological assessment of Mediterranean lagoons". Ecological Indicators 29 (2013): 48-61. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872419393&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.12.011
  29. Neto, João M.. "Response of intertidal macrobenthic communities and primary producers to mitigation measures in a temperate estuary". Ecological Indicators 25 (2013): 10-22. http://www.scopus.com/inward/record.url?eid=2-s2.0-84870222386&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.08.022
  30. Neto, João M.. "Seagrass Quality Index (SQI), a Water Framework Directive compliant tool for the assessment of transitional and coastal intertidal areas". Ecological Indicators 30 (2013): 130-137. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875192207&partnerID=MN8TOARS.
    10.1016/j.ecolind.2013.02.015
  31. Neto, João M.. "Towards a DPSIR driven integration of ecological value, water uses and ecosystem services for estuarine systems". Ocean and Coastal Management 72 (2013): 64-79. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872688092&partnerID=MN8TOARS.
    10.1016/j.ocecoaman.2011.06.016
  32. Neto, J.M.; Feio, M.J.; Teixeira, H.; Patrício, J.; Serra, S.R.Q.; Franco, J.N.; Calapez, A.R.; Constantino, E.. "Transitional and freshwater bioassessments: One site, two perspectives?". Marine Pollution Bulletin (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84887361120&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2013.10.048
  33. Neto, João M.. "Natural variability and reference conditions: Setting type-specific classification boundaries for lagoon macroinvertebrates in the Mediterranean and Black Seas". Hydrobiologia 704 1 (2013): 325-345. http://www.scopus.com/inward/record.url?eid=2-s2.0-84873749249&partnerID=MN8TOARS.
    10.1007/s10750-012-1273-z
  34. Neto, João M.. "Monitoring estuarine water quality using satellite imagery. The Mondego river estuary (Portugal) as a case study". Ocean and Coastal Management 72 (2013): 13-21. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872678706&partnerID=MN8TOARS.
    10.1016/j.ocecoaman.2011.06.013
  35. Neto, João M.. "Exploring the robustness of macrophyte-based classification methods to assess the ecological status of coastal and transitional ecosystems under the Water Framework Directive". Hydrobiologia 704 1 (2013): 279-291. http://www.scopus.com/inward/record.url?eid=2-s2.0-84873748278&partnerID=MN8TOARS.
    10.1007/s10750-012-1426-0
  36. Neto, João M.. "Influence of benthic macroinvertebrates on the erodability of estuarine cohesive sediments: Density- and biomass-specific responses". Estuarine, Coastal and Shelf Science (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84885091119&partnerID=MN8TOARS.
    10.1016/j.ecss.2013.09.020
  37. Neto, João M.. "Good Environmental Status of marine ecosystems: What is it and how do we know when we have attained it?". Marine Pollution Bulletin 76 1-2 (2013): 16-27. http://www.scopus.com/inward/record.url?eid=2-s2.0-84886091159&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2013.08.042
  38. Neto, João M.. "Diversity of European seagrass indicators: Patterns within and across regions". Hydrobiologia 704 1 (2013): 265-278. http://www.scopus.com/inward/record.url?eid=2-s2.0-84873747068&partnerID=MN8TOARS.
    10.1007/s10750-012-1403-7
  39. Neto, João M.. "Development of an Angiosperm Quality Assessment Index (AQuA-Index) for ecological quality evaluation of Portuguese water bodies - A multi-metric approach". Ecological Indicators 25 (2013): 141-148. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867796063&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.09.021
  40. Neto, João M.. "Assessment of estuarine macrobenthic assemblages and ecological quality status at a dredging site in a southern Europe estuary". Ocean and Coastal Management 72 (2013): 80-92. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872674684&partnerID=MN8TOARS.
    10.1016/j.ocecoaman.2011.07.009
  41. Neto, João M.. "Robustness of the Estuarine Fish Assessment Index (EFAI) regarding water body definition criteria". Ecological Indicators 20 (2012): 1-8. http://www.scopus.com/inward/record.url?eid=2-s2.0-84857681798&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.02.001
  42. Neto, João M.. "Ability of benthic indicators to assess ecological quality in estuaries following management". Ecological Indicators 19 (2012): 130-143. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858746658&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.06.014
  43. Neto, João M.. "Current developments on fish-based indices to assess ecological-quality status of estuaries and lagoons". Ecological Indicators 23 (2012): 34-45. http://www.scopus.com/inward/record.url?eid=2-s2.0-84859403734&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.03.006
  44. Neto, João M.. "Coastal waters classification based on physical attributes along the NE Atlantic region. An approach for rocky macroalgae potential distribution". Estuarine, Coastal and Shelf Science 112 (2012): 105-114. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866895895&partnerID=MN8TOARS.
    10.1016/j.ecss.2011.11.041
  45. Neto, João M.. "A biological trait approach to assess the functional composition of subtidal benthic communities in an estuarine ecosystem". Ecological Indicators 20 (2012): 121-133. http://www.scopus.com/inward/record.url?eid=2-s2.0-84857977630&partnerID=MN8TOARS.
    10.1016/j.ecolind.2012.02.004
  46. Neto, João M.. "The importance of habitat-type for defining the reference conditions and the ecological quality status based on benthic invertebrates: The Ria Formosa coastal lagoon (Southern Portugal) case study". Ecological Indicators 19 (2012): 61-72. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858747797&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.08.004
  47. Neto, João M.. "Do nematode and macrofauna assemblages provide similar ecological assessment information?". Ecological Indicators 14 1 (2012): 124-137. http://www.scopus.com/inward/record.url?eid=2-s2.0-80053176063&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.06.027
  48. Neto, João M.. "Marine Macroalgae Assessment Tool (MarMAT) for intertidal rocky shores. Quality assessment under the scope of the European Water Framework Directive". Ecological Indicators 19 (2012): 39-47. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858750250&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.09.006
  49. Neto, João M.. "Defining phytoplankton class boundaries in Portuguese transitional waters: An evaluation of the ecological quality status according to the Water Framework Directive". Ecological Indicators 19 (2012): 5-14. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858745764&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.07.025
  50. Neto, João M.. "Population dynamics of Corbicula fluminea (Müller, 1774) in mesohaline and oligohaline habitats: Invasion success in a Southern Europe estuary". Estuarine, Coastal and Shelf Science 112 (2012): 31-39. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866903908&partnerID=MN8TOARS.
    10.1016/j.ecss.2011.07.014
  51. Neto, João M.. "Ecological reference conditions and quality states of marine macroalgae sensu Water Framework Directive: An example from the intertidal rocky shores of the Portuguese coastal waters". Ecological Indicators 19 (2012): 24-38. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858746220&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.08.022
  52. Neto, João M.. "Ecological quality assessment of transitional waters based on fish assemblages in Portuguese estuaries: The Estuarine Fish Assessment Index (EFAI)". Ecological Indicators 19 (2012): 144-153. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858748846&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.08.005
  53. Neto, João M.. "Feeding diversity index as complementary information in the assessment of ecological quality status". Ecological Indicators 19 (2012): 73-78. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858745500&partnerID=MN8TOARS.
    10.1016/j.ecolind.2011.08.003
  54. Neto, João M.. "Response of single benthic metrics and multi-metric methods to anthropogenic pressure gradients, in five distinct European coastal and transitional ecosystems". Marine Pollution Bulletin 62 3 (2011): 499-513. http://www.scopus.com/inward/record.url?eid=2-s2.0-79952194464&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2010.12.009
  55. Pinto, Rute; Patrício, Joana; Neto, João Magalhães; Salas, Fuensanta; Marques, João Carlos. "Assessing estuarine quality under the ecosystem services scope: Ecological and socioeconomic aspects". Ecological Complexity 7 3 (2010): 389-402. http://dx.doi.org/10.1016/j.ecocom.2010.05.001.
    10.1016/j.ecocom.2010.05.001
  56. Neto, João Magalhães; Teixeira, Heliana; Patrício, Joana; Baeta, Alexandra; Veríssimo, Helena; Pinto, Rute; Marques, João Carlos. "The Response of Estuarine Macrobenthic Communities to Natural- and Human-Induced Changes: Dynamics and Ecological Quality". Estuaries and Coasts 33 6 (2010): 1327-1339. http://dx.doi.org/10.1007/s12237-010-9326-x.
    10.1007/s12237-010-9326-x
  57. Neto, João M.. "The influence of mesh size in environmental quality assessment of estuarine macrobenthic communities". Ecological Indicators 10 6 (2010): 1162-1173. http://www.scopus.com/inward/record.url?eid=2-s2.0-77957873702&partnerID=MN8TOARS.
    10.1016/j.ecolind.2010.03.019
  58. Garel, Erwan; Nunes, Susana; Neto, João Magalhães; Fernandes, Rodrigo; Neves, Ramiro; Marques, João Carlos; Ferreira, Óscar. "The autonomous Simpatico system for real-time continuous water-quality and current velocity monitoring: examples of application in three Portuguese estuaries". Geo-Marine Letters 29 5 (2009): 331-341. http://dx.doi.org/10.1007/s00367-009-0147-5.
    10.1007/s00367-009-0147-5
  59. Alves, Ana Sofia; Adão, Helena; Patrício, Joana; Neto, João Magalhães; Costa, Maria José; Marques, João Carlos. "Spatial distribution of subtidal meiobenthos along estuarine gradients in two southern European estuaries (Portugal)". Journal of the Marine Biological Association of the United Kingdom 89 8 (2009): 1529-1540. http://dx.doi.org/10.1017/s0025315409000691.
    10.1017/s0025315409000691
  60. Neto, João M.. "Spatial distribution of subtidal meiobenthos along estuarine gradients in two southern european estuaries (Portugal)". Journal of the Marine Biological Association of the United Kingdom 89 8 (2009): 1529-1540. http://www.scopus.com/inward/record.url?eid=2-s2.0-77953610117&partnerID=MN8TOARS.
    10.1017/S0025315409000691
  61. Neto, João M.. "Spatial distribution of subtidal Nematoda communities along the salinity gradient in southern European estuaries". Acta Oecologica 35 2 (2009): 287-300. http://www.scopus.com/inward/record.url?eid=2-s2.0-60149096062&partnerID=MN8TOARS.
    10.1016/j.actao.2008.11.007
  62. Neto, João M.. "Review and evaluation of estuarine biotic indices to assess benthic condition". Ecological Indicators 9 1 (2009): 1-25. http://www.scopus.com/inward/record.url?eid=2-s2.0-48149087096&partnerID=MN8TOARS.
    10.1016/j.ecolind.2008.01.005
  63. Neto, João M.. "Quality assessment of benthic macroinvertebrates under the scope of WFD using BAT, the Benthic Assessment Tool". Marine Pollution Bulletin 58 10 (2009): 1477-1486. http://www.scopus.com/inward/record.url?eid=2-s2.0-70349292126&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2009.06.006
  64. Neto, João M.. "The robustness of ecological indicators to detect long-term changes in the macrobenthos of estuarine systems". Marine Environmental Research 68 1 (2009): 25-36. http://www.scopus.com/inward/record.url?eid=2-s2.0-67349256154&partnerID=MN8TOARS.
    10.1016/j.marenvres.2009.04.001
  65. Martinho, F.; Leitão, R.; Neto, J. M.; Cabral, H.; Lagardère, F.; Pardal, M. A.. "Estuarine colonization, population structure and nursery functioning for 0-group sea bass (Dicentrarchus labrax), flounder (Platichthys flesus) and sole (Solea solea) in a mesotidal temperate estuary". Journal of Applied Ichthyology 24 3 (2008): 229-237. http://dx.doi.org/10.1111/j.1439-0426.2007.01049.x.
    10.1111/j.1439-0426.2007.01049.x
  66. Neto, João M.. "A benthic perspective in assessing the ecological status of estuaries: The case of the Mondego estuary (Portugal)". Ecological Indicators 8 4 (2008): 404-416. http://www.scopus.com/inward/record.url?eid=2-s2.0-39749156457&partnerID=MN8TOARS.
    10.1016/j.ecolind.2007.02.008
  67. Neto, João M.. "Response of intertidal macrobenthic communities to long term human induced changes in the Eo estuary (Asturias, Spain): Implications for environmental management". Marine Environmental Research 66 2 (2008): 288-299. http://www.scopus.com/inward/record.url?eid=2-s2.0-48549096884&partnerID=MN8TOARS.
    10.1016/j.marenvres.2008.04.004
  68. Neto, João M.. "Modelling nutrient mass balance in a temperate meso-tidal estuary: Implications for management". Estuarine, Coastal and Shelf Science 76 1 (2008): 175-185. http://www.scopus.com/inward/record.url?eid=2-s2.0-36849021035&partnerID=MN8TOARS.
    10.1016/j.ecss.2007.06.013
  69. Neto, João M.. "Ecological indices tracking distinct impacts along disturbance-recovery gradients in a temperate NE Atlantic Estuary - Guidance on reference values". Estuarine, Coastal and Shelf Science 80 1 (2008): 130-140. http://www.scopus.com/inward/record.url?eid=2-s2.0-52149117144&partnerID=MN8TOARS.
    10.1016/j.ecss.2008.07.017
  70. Neto, João M.. "BIOLOGY, POPULATION DYNAMICS, AND SECONDARY PRODUCTION OF TALITRUS SALTATOR (AMPHIPODA, TALITRIDAE) AT KORBA BEACH (EAST COAST OF TUNISIA)". Crustaceana 80 9 (2007): 1103-1119. http://dx.doi.org/10.1163/156854007782008595.
    10.1163/156854007782008595
  71. Viegas, I.; Martinho, F.; Neto, J.; Pardal, M.. "Population dynamics, distribution and secondary production of the brown shrimp Crangon crangon (L.) in a southern European estuary. Latitudinal variations". Scientia Marina 71 3 (2007): 451-460. http://www.scopus.com/inward/record.url?eid=2-s2.0-45149117763&partnerID=MN8TOARS.
    10.3989/scimar.2007.71n3451
  72. Neto, João M.. "The use of nursery areas by juvenile fish in a temperate estuary, Portugal". Hydrobiologia 587 1 (2007): 281-290. http://www.scopus.com/inward/record.url?eid=2-s2.0-34250726493&partnerID=MN8TOARS.
    10.1007/s10750-007-0689-3
  73. Neto, João M.. "The fish assemblage of the Mondego estuary: Composition, structure and trends over the past two decades". Hydrobiologia 587 1 (2007): 269-279. http://www.scopus.com/inward/record.url?eid=2-s2.0-34250774398&partnerID=MN8TOARS.
    10.1007/s10750-007-0688-4
  74. Neto, João M.. "Significant variations in the productivity of green macroalgae in a mesotidal estuary: Implications to the nutrient loading of the system and the adjacent coastal area". Marine Pollution Bulletin 54 6 (2007): 678-690. http://www.scopus.com/inward/record.url?eid=2-s2.0-34249813119&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2007.01.023
  75. Neto, João M.. "The influence of an extreme drought event in the fish community of a southern Europe temperate estuary". Estuarine, Coastal and Shelf Science 75 4 (2007): 537-546. http://www.scopus.com/inward/record.url?eid=2-s2.0-35548974649&partnerID=MN8TOARS.
    10.1016/j.ecss.2007.05.040
  76. Neto, João M.. "Opportunistic macroalgae metrics for transitional waters. Testing tools to assess ecological quality status in Portugal". Marine Pollution Bulletin 54 12 (2007): 1887-1896. http://www.scopus.com/inward/record.url?eid=2-s2.0-36549016596&partnerID=MN8TOARS.
    10.1016/j.marpolbul.2007.08.003
  77. Ferreira, S. M.; Brandão, A.; Baeta, A.; Neto, J. M.; Lillebø, A. I.; Jensen, K. T.; Pardal, M. A.. "Effects of restoration management on the estuarine isopod Cyathura carinata: mediation by trematodes and habitat change". Marine Biology 151 1 (2006): 109-118. http://dx.doi.org/10.1007/s00227-006-0455-5.
    10.1007/s00227-006-0455-5
  78. Marques, Sónia Cotrim; Azeiteiro, Ulisses Miranda; Marques, João Carlos; Neto, João Miguel; Pardal, Miguel Ângelo. "Zooplankton and ichthyoplankton communities in a temperate estuary: spatial and temporal patterns". Journal of Plankton Research 28 3 (2006): 297-312. http://dx.doi.org/10.1093/plankt/fbi126.
    10.1093/plankt/fbi126
  79. Neto, João M.. "Erratum: Potential nitrification and denitrification on different surfaces in a constructed treatment wetland (Journal of Environmental Quality (2003) 32 (2414-2420))". Journal of Environmental Quality 35 1 (2006): http://www.scopus.com/inward/record.url?eid=2-s2.0-31844446144&partnerID=MN8TOARS.
    10.2134/jeq2005.0003er
  80. Neto, João M.. "Feeding ecology, population structure and distribution of Pomatoschistus microps (Krøyer, 1838) and Pomatoschistus minutus (Pallas, 1770) in a temperate estuary, Portugal". Estuarine, Coastal and Shelf Science 66 1-2 (2006): 231-239. http://www.scopus.com/inward/record.url?eid=2-s2.0-28844459998&partnerID=MN8TOARS.
    10.1016/j.ecss.2005.08.012
  81. Neto, João M.. "User-friendly guide for using benthic ecological indicators in coastal and marine quality assessment". Ocean and Coastal Management 49 5-6 (2006): 308-331. http://www.scopus.com/inward/record.url?eid=2-s2.0-33646828936&partnerID=MN8TOARS.
    10.1016/j.ocecoaman.2006.03.001
  82. Neto, João M.. "The effect of eutrophication abatement on the bivalve Scrobicularia plana". Estuarine, Coastal and Shelf Science 63 1-2 (2005): 261-268. http://www.scopus.com/inward/record.url?eid=2-s2.0-14644433056&partnerID=MN8TOARS.
    10.1016/j.ecss.2004.11.019
  83. Neto, João M.. "Seasonal variation in short-term survival of Zostera noltii transplants in a declining meadow in Portugal". Aquatic Botany 82 2 (2005): 132-142. http://www.scopus.com/inward/record.url?eid=2-s2.0-20444396190&partnerID=MN8TOARS.
    10.1016/j.aquabot.2005.03.006
  84. Neto, João M.. "Management of a shallow temperate estuary to control eutrophication: The effect of hydrodynamics on the system's nutrient loading". Estuarine, Coastal and Shelf Science 65 4 (2005): 697-707. http://www.scopus.com/inward/record.url?eid=2-s2.0-27844510475&partnerID=MN8TOARS.
    10.1016/j.ecss.2005.07.009
  85. Neto, João M.. "Biology, population dynamics and secondary production of the green crab Carcinus maenas (L.) in a temperate estuary". Estuarine, Coastal and Shelf Science 65 1-2 (2005): 43-52. http://www.scopus.com/inward/record.url?eid=2-s2.0-25144481244&partnerID=MN8TOARS.
    10.1016/j.ecss.2005.05.004
  86. Bastviken, S.K.; Eriksson, P.G.; Martins, I.; Neto, J.M.; Leonardson, L.; Tonderski, K.. "Erratum: Potential Nitrification and Denitrification on Different Surfaces in a Constructed Treatment Wetland (Journal of Environmental Quality (2003) 32 (2414-2420))". Journal of Environmental Quality 33 1 (2004): http://www.scopus.com/inward/record.url?eid=2-s2.0-0345742688&partnerID=MN8TOARS.
  87. Neto, João M.. "Evaluation of the applicability of a marine biotic index to characterize the status of estuarine ecosystems: The case of Mondego estuary (Portugal)". Ecological Indicators 4 3 (2004): 215-225. http://www.scopus.com/inward/record.url?eid=2-s2.0-3142635273&partnerID=MN8TOARS.
    10.1016/j.ecolind.2004.04.003
  88. Neto, João M.. "Phosphorous dynamics in a temperate intertidal estuary". Estuarine, Coastal and Shelf Science 61 1 (2004): 101-109. http://www.scopus.com/inward/record.url?eid=2-s2.0-4444241494&partnerID=MN8TOARS.
    10.1016/j.ecss.2004.04.007
  89. Bastviken, Sofia Kallner; Eriksson, Peder G.; Martins, Irene; Neto, João M.; Leonardson, Lars; Tonderski, Karin. "Potential Nitrification and Denitrification on Different Surfaces in a Constructed Treatment Wetland". Journal of Environmental Quality 32 6 (2003): 2414-2420. http://dx.doi.org/10.2134/jeq2003.2414.
    10.2134/jeq2003.2414
  90. Bastviken, S.K.; Eriksson, P.G.; Martins, I.; Neto, J.M.; Leonardson, L.; Tonderski, K.. "Wetlands and Aquatic Processes: Potential Nitrification and Denitrification on Different Surfaces in a Constructed Treatment Wetland". Journal of Environmental Quality 32 6 (2003): 2414-2420. http://www.scopus.com/inward/record.url?eid=2-s2.0-0242498643&partnerID=MN8TOARS.
  91. Neto, João M.. "Salinity as the major factor affecting Scirpus maritimus annual dynamics: Evidence from field data and greenhouse experiment". Aquatic Botany 77 2 (2003): 111-120. http://www.scopus.com/inward/record.url?eid=2-s2.0-0141788051&partnerID=MN8TOARS.
    10.1016/S0304-3770(03)00088-3
  92. Duarte, A.S.; Pinho, J.L.; Pardal, M.A.; Neto, J.M.; Vieira, J.P.; Santos, F.S.. "Effect of residence times on River Mondego estuary eutrophication vulnerability". Water Science and Technology 44 2-3 (2001): 329-336. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034869242&partnerID=MN8TOARS.
Preface / Postscript
  1. Neto, João M.. "Marine Algae Biodiversity, Taxonomy, Environmental Assessment, and Biotechnology Preface". Preface to Marine Algae: Biodiversity, Taxonomy, Environmental Assessment, and Biotechnology, V-V. 2015.
Preprint
  1. Sofia Duarte; Pedro E. Vieira; Barbara R. Leite; Marcos A.L. Teixeira; João M. Neto; Filipe O. Costa. "Comparing DNA metabarcoding with morphology in the assessment of macrozoobenthos in Portuguese transitional waters in the scope of the Water Framework Directive monitoring". 2022. https://doi.org/10.1101/2022.05.10.491303.
    10.1101/2022.05.10.491303
  2. Silva, Carla; Lemos, Marco; Gaspar, Rui; Gonçalves, Carlos; Neto, João. "The Effects of the Invasive Seaweed <em>Asparagopsis Armata</em> on Native Rock Pool Communities: Evidences from Experimental Exclusion". 2020. http://dx.doi.org/10.20944/preprints202010.0089.v1.
    10.20944/preprints202010.0089.v1
Report
  1. Fernandes J.; Neto, João M.. Corresponding author: Neto, João M.. 2023. Deliverable C2.3 - Elimination of invasive vegetation species.
  2. Fernandes, João; Prista, Gonçalo Abreu; Mazarrasa, Inés ; Recio, Maria; Teixeira, Zara; Neto, João M.. 2022. Adaptation to climate change through management and restoration of European estuarine ecosystems (Project LIFE18 CCA/ES/001160). Deliverable A.1.3 - GIS module: User guide for mapping estuarine areas under reclaimed or degraded conditions in three Atlantic EU regions. Characterization of the restoration potential to adapt to Climate Change. https://lifeadaptablues.eu/wp-content/uploads/2022/05/Deliverable_A1_MappingProtocol.pdf.
  3. Fernandes J., Prista G., Mazarrasa I., Recio M., Teixeira Z., Neto J.M.. 2022. LIFE ADAPTA BLUES – “Adaptation to climate change through management and restoration of European estuarine ecosystems” (Project LIFE18 CCA/ES/001160). Deliverable A.1.3 - GIS module: User guide for mapping estuarine areas under reclaimed or degraded conditions in three Atlantic EU regions. Characterization of the restoration potential to adapt to Climate Change.
  4. Mazarrasa I., Recio M., Jiménez M., Torres S., Neto J.M.. 2021. LIFE ADAPTA BLUES – “Adaptation to climate change through management and restoration of European estuarine ecosystems” (Project LIFE18 CCA/ES/001160). Deliverable A2.1: Assessment of the co-benefits of Climate Change provided by estuarine ecosystems and application to three European estuarine regions..
  5. Mazarrasa I., Grandjean T., Neto J.M.. 2021. LIFE ADAPTA BLUES – “Adaptation to climate change through management and restoration of European estuarine ecosystems” (Project LIFE18 CCA/ES/001160). Deliverable A.3.2: Capacity of tidal habitats to path with to sea level rise in European estuaries.
  6. Andreu Blanco, Marco FL Lemos, Leonel Pereira, Rui Gaspar, Teresa Mouga, João M Neto, JS Troncoso, Celia Olabarria. 2020. Mapping invasive macroalgae in the western Iberian Peninsula: a methodological guide.
  7. Neto J.M., Afonso C., Afonso I., Boia A., Brito A.C., Caçador I., Chaínho P., Camarão B., Cardoso I., Cardoso I.*, Cerej. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. I – Elementos Gerais.
  8. Brito A.C., Boia A., Camarão B., Cardoso I., Cardoso I.*, Cereja R., Cruz J., Gamito S., Garcia C., Gonçalves J.M.S., He. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. II – Elementos Químicos e Físico-Químicos..
  9. Brito A.C., Boia A., Camarão B., Cardoso I., Cardoso I.*, Cereja R., Cruz J., Gamito S., Garcia C., Gonçalves J.M.S., He. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. III – Fitoplâncton.
  10. Neto J.M., Melo R., Mace R., Martins M., Mendes R.N., Pacheco D., Parreira F., Santos R., Silva J.. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. IV – Macroalgas Oportunistas.
  11. Gaspar R., Pereira L., Silva J., Melo R., Mendes R.N., Tavares A.M., Neto J.M.. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. V – Macroalgas Substrato Rochoso..
  12. Neto J.M., Melo R., Mace R., Martins M., Mendes R.N., Pacheco D., Parreira F., Santos R., Silva J.. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. VI – Prados Marinhos.
  13. Caçador I., Lopes C.L., Cardoso I., Pacheco D., Pinto M.V., Silva J., Neto J.M.. 2020. MESCLA - Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras¿ (Project POSEUR-03-2013-FC-000001). Final Report ¿ Vol. VII ¿ Vegetação de Sapais..
  14. Neto J.M., Gamito S., Silva G., Afonso C., Afonso I., Cardoso I., Costa J.L., Fernandes J., Fernandéz L.D., Mateus M., M. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. VIII – Macroinvertebrados Bentónicos..
  15. Fonseca V., Gonçalves J.M.S., Costa J.L., Cabral H., Domingos I., Escribano P., Henriques S., Monteiro P., Oliveira F.,. 2020. MESCLA – “Melhorar e Complementar os Critérios de Classificação do Estado das Massas de Água de Transição e Costeiras” (Project POSEUR-03-2013-FC-000001). Final Report – Vol. IX – Ictiofauna.
  16. Van Hoey G., Bonne W., Muxica I., Josefson A., Borgersen G., Rygg B., Borja A., Philips G., Miles A.I., Dubois S., Desro. 2019. Coastal waters North East Atlantic Geographic Intercalibration Group. Benthic invertebrate fauna ecological assessment methods.
  17. Neto J.M., Salas Herrero F., Best M., Buchet R., Heiber W., Juanes J.A., Kolbe K., Recio M., Ruiter H., Scanlan C., Duar. 2019. Coastal and Transitional waters North East Atlantic Geographic Intercalibration Group. Saltmarshes ecological assessment methods.
  18. Muxika I., Van Hoey G., Bonne W., Salas Herrero F., Borja A., Philips G., Miles A.l., Dubois S., Desroy N., Buchet R., X. 2019. Transitional waters North East Atlantic Geographic Intercalibration Group. Benthic invertebrate fauna ecological assessment methods.
  19. Neto J.M., Salas-Herrero F., Best M., Buchet R., Heiber W., Juanes J.A., Kolbe K., Recio M., Ruiter H., Scanlan C., Wilk. 2018. Coastal and Transitional waters North East Atlantic Geographic Intercalibration Group. Seagrasses ecological assessment methods.
  20. Neto J.M.. 2014. Estabelecimento de Sistemas de Classificacão, Avaliacão do Estado das Massas de Água Costeira e de Transição, desenvolvimento de metodologias para a identificacão de Pressões significativas e acompanhamento do Exercício de Intercalibracão – Elemento Biológico Macroinvertebrados Bentónicos.
  21. Neto J.M. & Marques J.C.,. 2013. Tipologia dos estuários dos Rios Minho e San Simon. Análise comparativa com a tipologia definida no âmbito da Directiva Quadro da Água para as massas de água de transição de Portugal..
  22. Neto J.M., Barría P., Garcia A.C.,. 2012. Impacto da captura de meixão nas comunidades estuarinas. Acompanhamento das operações de fiscalização e remoção de redes ilegais no Mondego..
  23. Marques, J.C., Garcia, A.C., Veríssimo, H., Neto, J.M,. 2012. Monitorização das comunidades biológicas costeiras, no prós obra do prolongamento do molhe Norte do Porto da Figueira da Foz - Relatório Final.
  24. Marques, J.C., Garcia, A.C., Neto, J., Patrício, J, Marques, L. & Pablo, B. 2011. Monitorização das comunidades biológicas costeiras, no prós obra do prolongamento do molhe Norte do Porto da Figueira da Foz - 1º Relatório de Progressos.
  25. Marques, J.C., Teixeira, H., Neto, J.M & Patricio, J. 2009. Avaliação do Estado Ecológico das Massas de Água Costeiras e de Transição e do Potencial Ecológico das Massas de Água Fortemente Modificadas – Relatório Anual de Progressos.
  26. Marques, J.C., Neto, J.M., Patrício, J., Pinto, R., Teixeira, H., Veríssimo, H. 2007. Monitoring the Mondego estuary. Anthropogenic changes and their impact on ecological quality. Preliminary results from the first assessment of the effects of reopening the communication between the North and South arms on the eutrophication state of the system. Final Report..
  27. Newton, A., S. Cristina, J. Guiomar, P. C. Goela, B. Fragoso, J.C. Marques, J.M. Neto, H. Teixeira, J. Patrício, A. Baet. 2007. Reference Conditions and Intercalibration of Portuguese Coastal Waters. Intercalibration exercise of guidelines for the applications of the European Union Water Framework Directive.
  28. Marques, J.C., Neto, J.M., Patrício, J., Pinto, R., Teixeira, H.L., Veríssimo, H. 2006. Estudo piloto do estuário do Mondego no âmbito da implementação do Programa Objectivos de Qualidade Ambiental Eutrofização (EcoQOs-Eutro-OSPAR). Harmonização dos critérios OSPAR com a Directiva Quadro da Água Europeia..
  29. Marques, J.C., Neto, J.M., Teixeira, H. & Patrício, J.. 2006. Preliminary assessment results regarding the effects of the re-opening of the communication between the two arms of the Mondego estuary: Physico-Chemical and Ecological Parameters. Final Report..
  30. Marques, J. C., H. Teixeira, J. Patrício & J. Neto. 2005. Avaliação do impacto das obras de interrupção da ligação entre os dois braços do estuário do Mondego na qualidade ecológica do sistema. Propostas de solução..
  31. Marques, J.C., Baeta, A., Trancoso, A.R., Marcotegui, A., Rodrigues, E.T., Martinho, F., Salas, F., Patrício, J., Alves,. 2004. Caracterização do estuário do Mondego e estabelecimento de cenários de gestão em termos da qualidade da água e da integridade do ecossistema..
Thesis / Dissertation
  1. "Nutrient enrichment in a temperate macro-tidal system. Scenario analysis and contribution to coastal management". PhD, Universidade de Coimbra, 2004.
  2. "Variação espacial e temporal dos moluscos do subtidal rochoso da Ilha da Berlenga.". Master, Universidade de Coimbra Departamento de Ciências da Vida, 1999.
Working paper
  1. Fragoso B.D.D., J.D. Icely, N. Odour, G. Moore, J.M. Neto, S. Danchenko, A. Newton. 2016. "Monitoring approaches for supporting offshore aquaculture management and EU Directives at Sagres, Portugal". http://scholar.google.com/scholar?oi=bibs&cluster=7574372588150763920&btnI=1&hl=en.
    DOI:10.7287/peerj.preprints.1799v1

Artistic / Performance

Video recording
  1. Neto, João M.. 2022. Introduction to marine ecosystems - Soft bottoms (MOOC; TRASMARES project - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  2. Neto, João M.. 2022. Marine ecosystems characterization - Functional diversity (MOOC; TRASMARES – ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  3. Neto, João M.. 2022. Functions, services and benefits of marine ecosystems - Biophysical quantification of ecosystem services (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  4. Neto, João M.. 2022. Functions, services and benefits of marine ecosystems - Monetary quantification of ecosystem services (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  5. Neto, João M.. 2022. Direct approaches for characterization of ecosystems distribution - Traditional sampling techniques (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  6. Neto, João M.. 2022. Introduction to DPSIR framework - DPSIR conceptual diagram and framework (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  7. Neto, João M.. 2022. Introduction to DPSIR framework - Driving forces and related human activities (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  8. Neto, João M.. 2022. Introduction to DPSIR framework - Pressures (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  9. Neto, João M.. 2022. Introduction to DPSIR framework - State changes on natural systems (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  10. Neto, João M.. 2022. Introduction to DPSIR framework - Impact on Human Welfare (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  11. Neto, João M.. 2022. Introduction to DPSIR framework - Response by Measures (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).
  12. Neto, João M.. 2022. Introduction to DPSIR framework - Evolution of DPSIR framework and requirement for application to marine ecosystems (MOOC; TRASMARES - ERASMUS+, Ref. 2019-1-ES01-KA203-065536).

Other

Other output
  1. Monitorização da Hidrodinâmica e da Qualidade da Água no Estuário do Rio Mondego. A hidrodinâmica dos sistemas estuarinos favorece a retenção de nutrientes, sustentando uma actividade biológica intensa, facto que potencia o desenvolvimento das comunidades ribeirinhas e intensifica o stress ambiental sobre estes ecossistemas aquáticos. No caso do estuário do rio Mondego, além das actividades portuária, balnear, industrial e de exploração de recursos marinhos, a orizicultura surg. 2008. Duarte, António A. L. S.; Vieira, José M. P.; Neto, João M.; Pardal, Miguel A.. http://hdl.handle.net/10316/13432.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/07/13 “Impacto de Santuários e Recifes Artificiais em projetos Eólicos Offshore", integrated in the Eólica Offshore Flutuante na região Centro de Portugal (IBER BLUE WIND - Projeto BOTAFOGO). Campus of University of Coimbra at Figueira da Foz. 13th of July, Figueira da Foz, Portugal.. Eólica Offshore Flutuante na região Centro de Portugal (IBER BLUE WIND - Projeto BOTAFOGO)
Campus of University of Coimbra at Figueira da Foz (Figueira da Foz, Portugal)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2023/11/01 - Current “Decision support system for the identification of potential areas for macroalgae aquaculture (MAqDECIDE)”. Integrated in the Ph.D. programme in “Biosciences- Specialization in Ecology” from the University of Coimbra. Funded by FCT. Supervision by PhD Researcher João M. Neto (University of Coimbra; Dept. of Life Sciences; MARE – Marine and Environmental Sciences Centre / ARNET - Aquatic Research Network), and co-supervised by PhD Researcher Ana Carla Garcia (EcletikPigment, Unipessoal, Lda / IATV - Instituto do Ambiente, Tecnologia e Vida
Supervisor
 PhD
Universidade de Coimbra, Portugal
2022 - Current “Fatty acid profile as an ecological indicator to support and develop socioeconomic interests on semi-enclosed ecosystems.”. University of Algarve (Portugal). (with supervision of Prof. Sofia Gamito, Dr. Ana Marta Gonçalves, and Dr João M. Neto)
Co-supervisor
2022/09/01 - 2026/06/30 The future of estuarine vegetated ecosystems and their use by local communities under CC conditions: a good management guidance attempt for the Mondego estuary
Supervisor
 PhD (PhD)
Universidade de Coimbra, Portugal
2021 - 2025 “Temporal and spatial dynamics of Phytoplankton in Sado Estuary (Portugal)”. Grant reference: MARE – Centro de Ciências do Mar e do Ambiente - UI/4292/2020. Integrated in the PhD program: Ciências do Mar da Faculdade de Ciências da Universidade de Lisboa. Funded by FCT through the program FCT-MARE (UI/4292/2020). Supervision by Dr. Ana C. Brito (FCUL; MARE-ULisboa), co-supervision by Dr. João M. Neto (UC; MARE-UCoimbra) and Dr. Mikel Latasa (CO de Gijon - IEO).
Co-supervisor
 PhD (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2020 - 2022 “Compilação, comparação e harmonização, para as águas de transição fronteiriças dos estuários do Minho e do Guadiana, de metodologias usadas por PT e ES na avaliação dos i) Parâmetros Físico-químicos de suporte aos elementos biológicos, e ii) Elementos de Qualidade Biológica Fitoplâncton, Macroinvertebrados Bentónicos e Peixes”, no âmbito da implementação do projeto ALBUFEIRA – “Programa de evaluación conjunta de las masas de agua de las cuencas hidrográficas hispano-portuguesas, Funded by INTERREG V A España Portugal (0489_
Supervisor
 Pos-doc (Other)
2020 - 2021 “Desenvolvimento de protocolos harmonizados para i) mapeamento SIG de áreas estuarinas degradadas, e ii) classificação e caracterização do potencial de recuperação de áreas estuarinas degradadas”, no âmbito da implementação do projeto LIFE ADAPTA BLUES (Adaptation to climate change through management and restoration of European estuarine ecosystems), Funded by EASME (LIFE18 CCA/ES/001160). (supervisor).
Supervisor
 Pos-doc (Other)
2019 - 2020 “Melhoria da Avaliação do Estado das Massas de Água Costeiras e de Transição”, no âmbito da implementação da Aquisição de Serviços para melhorar e complementar os critérios de classificação do estado das massas de água de transição e costeira. Funded by Agência Portuguesa do Ambiente (POSEUR-03-2013-FC-000001). (supervisor).
Supervisor
 Pos-doc (Other)
2016 - 2018 Economic potential of marine bivalves of the Portuguese coast: biochemical and stock characterization. (University of Coimbra - Portugal; Scientific advisor; co-supervisor; supervision by Prof. João Carlos Marques and Dr. Ana Marta Gonçalves)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2012 - 2017 Ecological quality status assessment of rocky shore macrobenthic communities along a latitudinal gradient: Development of tools for implementing the European Water Framework Directive. (University of Coimbra - Portugal; Supervisor; co-supervision by Prof. João Carlos Marques, Dr. Angel Borja, Dr. Steven Hawkins)
Supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2012 - 2016 Degradation and recovery trajectories of macroalgae populations along water quality changes. (University of Coimbra - Portugal; supervisor; co-supervision by Prof. Leonel Pereira and Dr. Irene Martins)
Supervisor
 Biociências (PhD)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2011 - 2012 Desenvolvimento e aplicação de indicadores ecológicos no âmbito da implementação da Diretiva Quadro da Água Europeia. (University of Coimbra - Portugal; Funded by FCT; Research plan in the scope of FP7 Project WISER; Scientific advisor; co-supervisor; supervision by Prof. João Carlos Marques).
Co-supervisor
IMAR - Institute of Marine Research (CMA), Portugal
2009 - 2012 Mondego Basin and Estuary Management: the role of ecosystem services (e)valuation for human well-being endeavour. (University of Coimbra - Portugal; Scientific advisor; co- supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2012 Response of benthic communities to natural and human-induced changes in a temperate estuary. Implications for recovery and management. (University of Coimbra - Portugal; Scientific advisor; co-supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2010 - 2011 Desenvolvimento e aplicação de uma ferramenta de avaliação do Estado de Qualidade Ecológica das Massas Costeiras e de Transição com base nas plantas de sapal. Contributo para a implementação da DQA em Portugal. (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. Leonel Pereira)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2010 - 2011 The rocky shore macrozoobenthic communities of Buarcos bay. (University of Coimbra - Portugal; co-supervisor)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2010 - 2011 Spatial and temporal variation of Corbicula fluminea (Muller, 1774) in the Mondego estuary. (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Dinâmica da flora macroalgal no estuário do Mondego. Respostas das métricas de avaliação ecológica ao longo do gradiente de salinidade. (University of Coimbra - Portugal; Supervisor; co-supervision by Prof. Leonel Pereira)
Supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Influence of hydrodynamics and sediment grain size in environmental quality of the estuarine polyhaline sector. (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Population dynamics of Corbicula fluminea (Muller, 1774) in the mesohaline and oligohaline areas of the Mondego estuary: spatial intrusion and ecological response. (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Variação temporal da comunidade macrobentónica subtidal do sector polihalino do braço Sul do estuário do Mondego. Contributo para a avaliação do estado ecológico. (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Do macrofauna assemblages reflect Zostera noltii meadows temporal dynamic associated with natural and antropogenic disturbances? (University of Coimbra - Portugal; Co-supervisor; supervision by João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2009 - 2010 Spatial and temporal heterogeneity of macrofauna assemblages in the polyhaline sector of a mesotidal estuary. (University of Coimbra - Portugal; Co-supervisor; supervision by João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2007 - 2010 Benthic Macroinvertebrates as Ecological Indicators for Estuarine and Coastal Ecosystems: Assessment and Intercalibration. (University of Coimbra - Portugal; Scientific advisor; co-supervisor; supervision by Prof. João Carlos Marques and Dr. Fuensanta Salas)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2008 - 2009 The Mondego estuary (Southwestern Europe) Mesohaline and Oligohaline macrozoobenthic communities. A contribution for their Ecological Quality Status Assessment. (University of Coimbra - Portugal; Co- supervisor; supervision by João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2008 - 2009 Avaliação do Estado de Qualidade Ecológica em ecossistemas estuarinos: Qual a influência da malha dos crivos na amostragem de macroinvertebrados bentónicos? (University of Coimbra - Portugal; Co- supervisor; supervision by João Carlos Marques)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2007 - 2008 Using benthic invertebrate data to assess the Ecological Quality Status of Ria Formosa (Portugal). (Erasmus Mundus European Joint Master in Water and Coastal Management; University of Algarve Portugal; Co-supervisor; supervision by Prof. Sofia Gamito)
Co-supervisor
Universidade do Algarve - Campus de Gambelas, Portugal
2007 - 2008 Assessment of Ecological Quality Status of rocky shores in South Portugal and implementation of Water Framework Directive. (Erasmus Mundus European Joint Master in Water and Coastal Management; University of Algarve - Portugal; Co-supervisor; supervision by Prof. Sofia Gamito)
Co-supervisor
Universidade do Algarve - Campus de Gambelas, Portugal
2006 - 2007 As macroalgas como ferramenta de avaliação ecológica da qualidade das águas costeiras (Macroalgae as ecological assessment tool on coastal waters). (University of Coimbra - Portugal; Co-supervisor; supervision by Prof. Leonel Pereira)
Co-supervisor
Universidade de Coimbra Departamento de Ciências da Vida, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2023/12/13 - 2023/12/13 “Adaptation measures for Climate Change effects on coastal zones”, Co-creation workshop, for presentation to local stakeholders and policy entities of the Catalogue of adaptation measures to the effects of Climate Change in the coastline, developed in the scope of LIFE ADAPTA BLUES project. Held in Quartel da Imagem at Figueira da Foz, with support of Figueira da Foz Municipality. Organisation, 13th December, Figueira da Foz, Portugal. (2024/12/13 - 2024/12/13)
2023/09/29 - 2023/09/29 “Hands-on activities”, integrated at the European Researchers Night'23 organised by the University of Coimbra. Teixeira Z, Cunha A, Neto JN, Moreira C, Rocha, AC, Camarao, B, Boia, A, Resende L, Fernandes J. Held in the Meeting Point at Figueira da Foz, with support of Figueira da Foz Municipality, 29th September, Figueira da Foz, Portugal. (2023/09/29 - 2023/09/29)
2023/02/15 - 2023/02/15 Member of organizing team of MAREFOZ 7th birthday scientific event - HUB AZUL DA COSTA ATLÂNTICA: ESTRATÉGIA REGIONAL PARA UMA ECONOMIA AZUL SUSTENTÁVEL. Held in MAREFOZ Laboratory and Campus da Universidade de Coimbra na Figueira da Foz, Portugal, 15 February 2023. (2023/02/15 - 2023/02/15)
Round table
2023/02/15 - 2023/02/15 “Desafios e oportunidades das Alterações Climáticas nas Zonas Costeiras”, integrated in the MAREFOZ 7th birthday. Public scientific part: HUB AZUL DA COSTA ATLÂNTICA - Estratégia regional para uma Economia Azul Sustentável. Organisation and chairman of workshop session, 15th February, Business Incubator of Figueira da Foz, Figueira da Foz, Portugal. (2023/02/15 - 2023/02/15)
2022/07/03 - 2022/07/08 Member of the Scientific Committee of 2nd meeting of the Iberian Ecological Society (SIBECOL) and the XXI conference of the Iberian Association of Limnology (AIL), together with with the 21st National Congress of Ecology (Portuguese Ecological Society – SPECO), held in Aveiro, Portugal, 3 – 8 July 2022. (2022/07/03 - 2022/07/08)
2018/07/05 - 2018/07/06 Organisation of Pre-Conference Day (Special Session) - "Marine Invaders - assessment and impact on aquatic ecosystems", in the International Meeting on Marine Research 2018 (IMMR’18), Peniche (Portugal) 5-6 July 2018. (2018/07/05 - 2018/07/06)
Symposium (Other)
 Instituto Politécnico de Leiria Escola Superior de Turismo e Tecnologia do Mar de Peniche, Portugal
2016 - 2016 Organisation of Special Session - Biomarkers: Tools/endpoints to detect environmental and toxicological stressors, in the 5th International EcoSummit Congress - Ecological Sustainability: Engineering Change. Montpellier (France) from 29 August – 1 September 2016. (2016 - 2016)
Congress (Other)
 Universidade de Coimbra Departamento de Ciências da Vida, Portugal

MARE - Marine and Environmental Sciences Centre, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2023/12/14 “Zostera noltei Hornemann sexual reproduction in Ria de Aveiro: insights for seagrass seed-based restoration”. João José Ferreira de Oliveira e Silva. Master thesis in Applied Marine Biology, Department of Biology, University of Aveiro. 14th December
(Thesis) Main arguer
 João José Ferreira de Oliveira e Silva (Master)
2022/12/19 “Avaliação do potencial das ascídias em sistemas de aquacultura multi-trófica integrada e sua distribuição na Ria de Aveiro”. Luisa da Costa Marques. PhD Program in Biologia e Ecologia das Alterações Globais, Department of Biology, University of Aveiro. Aveiro, Portugal. 19th December.
(Thesis) Main arguer
 Luisa da Costa Marques (PhD)
Universidade de Aveiro, Portugal
2022/12/07 “O efeito da recolonização com Zostera noltei nos fluxos de nutrientes na interface sedimento/água”. Raquel Fradoca Almeida. Master thesis in Applied Biology, Department of Biology, University of Aveiro. 7th December
(Thesis) Main arguer
 Raquel Fradoca Almeida (Master)
2022/12/07 “Análise da dinâmica de Carbono e Azoto na empresa ALGAplus. Um contributo para o plano de Gestão Ambiental da Empresa”. Bia Alexandra Barreto dos Santos. Master thesis in Applied Marine Biology, Department of Biology, University of Aveiro. 7th December.
(Thesis) Main arguer
 Bia Alexandra Barreto dos Santos (Master)
2022/04/04 “Biological invasions, pollution, and climate warming in Artemia: ecological and evolutionary responses”. Antónia Juliana Pais da Costa. Department of Life Sciences, University of Coimbra, Coimbra, Portugal, 04 April.
(Thesis) Arguer
 Antónia Juliana Pais da Costa (PhD)
2021/03/31 “Monitoring Coastal Benthic Colonization of Artificial Substrates with the Support of DNA Metabarcoding Approaches”. Bárbara Daniela da Rocha Leite. School of Sciences, University of Minho, Minho, Portugal, 31st March.
(Thesis) Main arguer
 Bárbara Daniela da Rocha Leite (PhD)
2021 Monitoring Coastal Benthic Colonization of Artificial Substrates with the Support of DNA Metabarcoding Approaches”. School of Sciences, University of Minho, Minho, Portugal, 31st March
(Thesis) Main arguer
 Bárbara Daniela da Rocha Leite (PhD)
Universidade do Minho Escola de Ciências, Portugal
2020 “How lipid rich chick diet affects the foraging ecology of adult Cory's Shearwater in the breeding season.” Master thesis in Ecology, Department of Life Sciences, FCTUC, University of Coimbra (Portugal). 20th September
(Thesis) Main arguer
 Sara Helena Moreira dos Santos (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2019 Commercial fish as bioindicators of pollution along the Portuguese coast”. Master thesis in Ecology, Department of Life Sciences, FCTUC, University of Coimbra (Portugal).
(Thesis) Main arguer
 Joana Filipa Magalhães da Silva (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2019 Levantamento da flora algal de Buarcos (guia ilustrado da flora algar de Buarcos) / Illustrated guide of Macroalgae of the Bay of Buarcos.” Master thesis in Biodiversidade e Biotecnologia Vegetal, Department of Life Sciences, FCTUC, University of Coimbra (Portugal), 6th September.
(Thesis) Main arguer
 Ana Rita Fonseca Sá (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2019 Biological invasion in Rio Grande do Sul, Brazil: Monitoring Ceratium furcoides (Levander) Langhans, its drivers, and ecological interactions in a high-altitude subtropical reservoir.” Master thesis in Ecology, Department of Life Sciences, FCTUC, University of Coimbra (Portugal). 20th September.
(Thesis) Main arguer
 Oscar Alberto Rojas Castillo (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2017/06/01 At-sea use of seabirds in the Atlantic Ocean: the role of environmental change and fisheries in detecting present and future trends . (University of Coimbra - Portugal)
(Thesis) Main arguer
 Lucas Krüger Garcia (PhD)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2016 Variação espacial da distribuição e abundância de poliquetas em tanques de terra utilizados em aquacultura semi-intensiva de peixe. (Department of Biology; University of Aveiro - Portugal)
(Thesis) Main arguer
 Andreia Sofia Lourenço dos Santos (Master)
Universidade de Aveiro Departamento de Biologia, Portugal
2014/11/21 Clasificación de Estuarios a Diferentes Escalas Espaciales Mediante la Integración de Modelos Físicos y Biológicos. (E.T.S. Ingenieros de Caminos, Canales y Puertos, Dpto. de Ciencias y Técnicas del Agua y del Medio Ambiente. Universidad de Cantabria, Santander, Spain).
(Thesis) Arguer
 Cristina Galván Arbeiza (PhD)
Universidad de Cantabria Escuela Técnica Superior de Ingenieros de Caminos Canales y Puertos, Spain
2013 Respostas bioquímicas e populacionais de Daphnia a um herbicida. (Department of Biology, University of Aveiro - Portugal).
(Thesis) Main arguer
 Micael Mendes Neves (Master)
Universidade de Aveiro Departamento de Biologia, Portugal
2013 Gestão dos níveis de água em salinas e a conservação de aves limícolas. (Faculty of Sciences and Technology, University of Coimbra - Portugal).
(Thesis) Main arguer
 Tânia Filipa Martinho Paredes (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2013 Selecção de habitat e conservação de aves nidificantes nas salinas do Samouco. (Faculty of Sciences and Technology, University of Coimbra - Portugal)
(Thesis) Main arguer
 Daniela Margarida Lima Alves Fonseca (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2013 Identificação e caracterização da flora algal e avaliação do estado de praias do concelho de Peniche. (Faculty of Sciences and Technology; University of Coimbra - Portugal).
(Thesis) Main arguer
 Ana Lucinda Coelho Lima (Master)
Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2011 Phytoplankton of the Mondego estuary according to the Water Framework Directive. (Universidade de Aveiro - Portugal)
(Thesis) Main arguer
 Cátia Sofia da Conceição Luís (Master)
Universidade de Aveiro Departamento de Biologia, Portugal
2009/01/15 Analogías biológicas en la arquitectura: del acercamiento biónico hacia los paradigmas de lo biodigital. (Escuela Técnica Superior de Arquitectura (ESARQ), Universitat Internacional de Catalunya (UIC), Barcelona, Spain)
(Thesis) Main arguer
 Mauro Costa Couceiro (PhD)
Universitat Internacional de Catalunya, Spain
2009 Ecologia e avaliação dos recursos bentónicos da zona de transição dulciaquícola-salobra no Rio Mira. (Faculdade de Ciências da Universidade de Lisboa - Portugal).
(Thesis) Main arguer
 João Paulo da Silva Medeiros (Master)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2008/05/26 Desarrollo de Procedimientos Aplicables a la Evaluación del Estado Ecológico de las Masas de Agua Costeras, Sensu Directiva Marco del Agua. (Departamento de Ciencias y Técnicas del Agua y del Medio Ambiente, University of Cantabria, Santander, Spain)
(Thesis) Arguer
 Xabier Guinda Salsamendi (PhD)
Universidad de Cantabria Escuela Técnica Superior de Ingenieros de Caminos Canales y Puertos, Spain
2008 Defining sea grass Ecological Status in Ria Formosa under the European Water Framework Directive. (Erasmus Mundus European Joint Master in Water and Coastal Management; Faculty of Sciences and Technology; University of Algarve)
(Thesis) Main arguer
 Patricia Garcia Marin (Master)
2008 Macroalgae as a Biological Quality Element for the assessment of Ecological Status of coastal waters. (Erasmus Mundus European Joint Master in Water and Coastal Management; Faculty of Sciences and Technology; University of Algarve)
(Thesis) Main arguer
 Girija Suryakant Parvatkar (Master)
Universidade do Algarve - Campus de Gambelas, Portugal

Association member

Society Organization name Role
2019 - Current SIBECOL - Sociedade Ibérica de Ecologia Membro. Elemento do grupo de trabalho dos Investigadores Marinhos
2016 - Current PROAQUA - Associação para a Promoção do Conhecimento em Ecologia Aquática Tesoureiro
1996 - Current SPECO - Sociedade Portuguesa de Ecologia Membro
1996 - Current Ordem dos Biólogos Member

Committee member

Activity description
Role 		Institution / Organization
2019 - Current SIBECOL - Iberian Society of Ecology; member; integrated in the SIBECOL coordination of marine research working group
Member
2008 - Current Conselho Estratégico da Reserva Natural da Berlenga (Strategic Council of the Berlenga Nature Reserve) Counselor - integrated into the Academic party of the Council Elements
Member
 Universidade de Coimbra Departamento de Ciências da Vida, Portugal

MARE - Marine and Environmental Sciences Centre, Portugal
2017 - 2018 Member of the Organising and Scientific Committees of the “XIX Conference of the Iberian Association of Limnology (AIL)”. Coimbra (Portugal) 24 – 29 June 2018.
Member
 Universidade de Coimbra Departamento de Ciências da Vida, Portugal

MARE - Marine and Environmental Sciences Centre, Portugal
2013 - 2015 Coordination of the Biological Quality Sub-Element – Seagrasses, for the NEA-GIG working group, in the EU Intercalibration exercise phase II - continuation (2013-2015)
Coordinator
 European Commission Joint Research Centre Ispra Sector, Italy
2013 - 2015 Researcher in Working Groups of Biological Quality Elements Benthic macroinvertebrates
Member
 European Commission Joint Research Centre Ispra Sector, Italy
2009 - 2012 Researcher in Working Groups of Biological Quality Elements Benthic macroinvertebrates (Ángel Borja, AZTI, Spain) and Fish Fauna (Mario Lepage, IRSTEA, France)
Member
 European Commission Joint Research Centre Ispra Sector, Italy

IMAR - Institute of Marine Research (CMA), Portugal
2008 - 2011 Coordination of the Biological Quality Element – Macroalgae and Angiosperms, for the NEA-GIG working group, in the EU Intercalibration exercise phase II (2008-2011)
Coordinator
 European Commission Joint Research Centre Ispra Sector, Italy

IMAR - Institute of Marine Research (CMA), Portugal
2010 - 2010 Member of the Organising Committee of ECSA 47 Symposium - Integrative tools and methods in assessing ecological quality in estuarine and coastal systems worldwide Figueira da Foz, 14 - 19 September (www.uc.pt/imar/ecsa47)
Member
 IMAR - Institute of Marine Research (CMA), Portugal
2005 - 2007 Researcher in working Groups of Biological Quality Elements - Other Aquatic Plants, Macrobenthic Fauna, Fish Fauna, for the NEA-GIG, in the EU Intercalibration exercise phase I (2004-2006)
Member
 European Commission Joint Research Centre Ispra Sector, Italy

IMAR - Institute of Marine Research (CMA), Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2023/05/29 - 2023/06/02 “Curso de Especialização em Restauração Ecológica de Rios e Sistemas Costeiros”, non-awarding degree course promoted by Reitoria-UC, 6 ECTS attributed by University of Coimbra, Portugal. (coordination: Dr. Joao M. Neto, Dr. Maria Joao Feio) (Especialização pós-licenciatura) Universidade de Coimbra, Portugal
2023/02/27 - 2023/02/27 MESCLA - Melhorar e complementar os critérios de classificação das massas de água de transição e costeiras. Palestra integrada na disciplina Qualidade Ecológica das Águas Continentais e Oceânicas, do Mestrado em Ecologia e Gestão Ambiental da FCUL. Orador convidado. 27/02/2023.
2023/02/27 - 2023/02/27 Qualidade Ecológica das Águas Continentais e Oceânicas”, integrated in the Master Course of “Ecologia e Gestão Ambiental” promoted by the Faculdade de Ciências da Universidade de Lisboa, 27th February, presented remotely (coordination; Dr. José Costa, Dr. Isabel Domingues) (Especialização pós-licenciatura) Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2019 - 2022 “MOOC 2 - ACTIVIDADES HUMANAS Y VULNERABILIDAD DE LOS ECOSISTEMAS MARINOS”, integrated in the Massive Open Online Course developed in the project TRASMARES – Specialized training on applied tools for sustainable marine ecosystems (ERASMUS+, Ref. 2019-1-ES01-KA203-065536), available through the online itinerary (https://trasmares.ihcantabria.com/cursos/). Universidade de Coimbra, Portugal

Universidad de Cantabria, Spain

Università degli Studi di Bologna Scuola di Scienze, Italy

Telefónica de España, Spain
2021/03/08 - 2021/03/08 MESCLA - Melhorar e complementar os critérios de classificação das massas de água de transição e costeiras. Palestra integrada na disciplina Qualidade Ecológica das Águas Continentais e Oceânicas, do Mestrado em Ecologia e Gestão Ambiental da FCUL. Orador convidado. 08/03/2021. mestrado (Mestrado) Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2021 - 2021 Theoretical and practical classes of the discipline “Biologia e Ecologia Marinha” (Presentation of the EU Environmental Directives: Water Framework Directive and Marine Strategy Framework Directive) integrated in the Biology graduation of the Department of Botany, University of Coimbra. (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2021 - 2021 “Qualidade Ecológica das Águas Continentais e Oceânicas”, integrated in the Master Course of “Ecologia e Gestão Ambiental” promoted by the Faculdade de Ciências da Universidade de Lisboa (Mestrado) Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2017 - 2017 Practical classes of the discipline ANIMAL DIVERSITY (Introduction to Diversity Indices. Study and analysis of benthic macroinvertebrate communities from the Buarcos Bay rocky shores: disturbance pressure) integrated in the Biology graduation of the Department of Life Sciences, University of Coimbra. (Invited by Prof. Isabel Luci Conceição and Prof. Rui Godinho) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2017 - 2017 “Summer Course - Tools for Aquatic Ecosystems Research”, promoted by IMAR – Institute of Marine Reseach; MARE-UC; III-UC, from the 10 – 14 July, Figueira da Foz, Portugal. (coordination: Dr. Joao M. Neto, Dr. Ana Marta Gonçalves) Summer Course - Tools for Aquatic Ecosystems Research (Outros) MARE - Marine and Environmental Sciences Centre, Portugal
2017 - 2017 “Methodologies for the assessment of Ecological Status in the scope of Water Framework Directive - Portuguese example”, integrated in the Master Course of “Indicadores Biológicos de Poluição” and promoted by the University of Aveiro, 9th November, Aveiro, Portugal. (coordination: Dr. Salomé Almeida) Indicadores Biológicos de Poluição (Mestrado) Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
2017 - 2017 Ecological Indicators – perspectives and approaches under the WFD", integrated in the 5th BIODECON Seminar – Assessing biodiversity. Faculty of Sciences of the University of Lisbon. 29th November, Lisbon, Portugal. Ecological Indicators – perspectives and approaches under the WFD (Outros) Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2016 - 2016 Practical classes of the discipline ANIMAL DIVERSITY (Introduction to Diversity Indices. Study and analysis of benthic macroinvertebrate communities from the Buarcos Bay rocky shores: disturbance pressure) integrated in the Biology graduation of the Department of Life Sciences, University of Coimbra. (Invited by Prof. Isabel Luci Conceição and Prof. Rui Godinho) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2016 - 2016 “Summer Course - Tools for Aquatic Ecosystems Research”, promoted by IMAR – Institute of Marine Reseach; MARE-UC; III-UC, from the 18 – 22 July, Figueira da Foz, Portugal. (coordination: Dr. Joao M. Neto, Dr. Maria Joao Feio, Dr. Ana Marta Gonçalves) Summer Course - Tools for Aquatic Ecosystems Research (Outros) MARE - Marine and Environmental Sciences Centre, Portugal
2015 - 2015 Practical classes of the discipline ANIMAL DIVERSITY (Introduction to Diversity Indices. Study and analysis of benthic macroinvertebrate communities from the Buarcos Bay rocky shores: disturbance pressure) integrated in the Biology graduation of the Department of Life Sciences, University of Coimbra. (Invited by Prof. Isabel Luci Conceição and Prof. Rui Godinho) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2014 - 2014 Practical classes of the discipline ANIMAL DIVERSITY (Introduction to Diversity Indices. Study and analysis of benthic macroinvertebrate communities from the Buarcos Bay rocky shores: disturbance pressure) integrated in the Biology graduation of the Department of Life Sciences, University of Coimbra. (Invited by Prof. Isabel Luci Conceição and Prof. Rui Godinho) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2014 - 2014 Coordinator and lecturer of theoretical and practical classes of the discipline of BIODIVERSITY AND GLOBAL CHANGES (Biodiversidade e Alterações Globais), integrated in graduation courses of ¿¿Ciências Ambientais¿, offered in the 2nd semester by the School of Sciences, University of Minho. BIODIVERSITY AND GLOBAL CHANGES¿ (Biodiversidade e Alterações Globais) (Licenciatura) Universidade do Minho Departamento de Biologia, Portugal
2014 - 2014 Coordinator and lecturer of theoretical and practical classes of the discipline of BIODIVERSITY AND GLOBAL CHANGES (Biodiversidade e Alterações Globais), integrated in graduation courses of ¿Biologia Aplicada¿, offered in the 2nd semester by the School of Sciences, University of Minho. BIODIVERSITY AND GLOBAL CHANGES¿ (Biodiversidade e Alterações Globais) (Licenciatura) Universidade do Minho Departamento de Biologia, Portugal
2014 - 2014 Coordinator and lecturer of theoretical and practical classes of the discipline of BIODIVERSITY AND GLOBAL CHANGES (Biodiversidade e Alterações Globais), integrated in graduation courses of ¿Biologia ¿ Geologia¿, offered in the 2nd semester by the School of Sciences, University of Minho. BIODIVERSITY AND GLOBAL CHANGES¿ (Biodiversidade e Alterações Globais) (Licenciatura) Universidade do Minho Departamento de Biologia, Portugal
2014 - 2014 “Avaliação da Qualidade da Água: os desafios Europeus", integrated in the activities of the Department of Biology (DBio Seminars), School of Sciences of University of Minho. 30th April, Minho, Portugal. Avaliação da Qualidade da Água: os desafios Europeus (Outros) Universidade do Minho Escola de Ciências, Portugal
2013 - 2013 "Ecologia de Estuários" (II curso avançado). Lecturer in post-graduation intensive course, invited by Prof. Thelma Dias. IMAR - Institute of Marine Research (CMA), Portugal Ecologia e Conservação (Pós-Graduação) Universidade Federal da Paraíba Fundação de Apoio à Pesquisa e à Extensão, Brazil
2013 - 2013 “Dinâmica de nutrientes e seus efeitos sobre populações estuarinas”, integrated in the 1º workshop sobre conectividade e Monitoramento de Ecossistemas Estuarinos, promoted by the pos-graduation program of Ecologia e Conservação from the Universidade Estadual de Paraíba, from the 15 – 16 March, João Pessoa-PB, Brazil. 1º workshop sobre conectividade e Monitoramento de Ecossistemas Estuarinos (Outros) Instituto Federal de Educação Ciência e Tecnologia da Paraíba - Campus João Pessoa, Brazil
2013 - 2013 “Assessing the Ecological Quality Status of estuaries under the European WFD: The case of the Mondego estuary (Portugal)." J.C. Marques, H. Teixeira, J. Patrício, J.M. Neto. In: Implementación de la Directiva Marco de Aguas en el estuario del Río Miño Condiciones de referencia y evaluación de estado ecológico, 11th January, Vigo, Spain. Implementación de la Directiva Marco de Aguas en el estuario del Río Miño Condiciones de referencia y evaluación de estado ecológico (Outros) Universidade de Vigo, Spain
2012 - 2012 “Aquatic primary producers: Environmental monitoring, ecotoxicity testing and toxic blooms”, to be held in Coimbra, from the 18 – 22 June, in cooperation Maria João Feio (IMAR-CMA, University of Coimbra, Portugal), Salomé Almeida, (University of Aveiro, Portugal), Leonel Pereira (University of Coimbra, Portugal), Gertie Arts (Alterra, University of Wageningen, The Netherlands), Ignácio Moreno-Garrido (ICMAN-CSIC, Spain), Matilde Moreira-Santos (IMAR-CMA, University of Coimbra, Portugal - coordinator), Rui Ribeiro (University of Coimbra, Portugal) Aquatic primary producers: Environmental monitoring, ecotoxicity testing and toxic blooms (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2010 - 2010 “Environmental quality assessment and management”. Coimbra (Portugal), from 3rd to 14th May, in cooperation with Professor João Carlos Marques (University of Coimbra, Portugal - coordinator), Professor Soren N. Nielsen (Royal School of Pharmacy, Copenhagen, Denmark), Professor Brian Fath (University of Towson, USA), Ph.D. Joana Patrício (IMAR–CMA, University of Coimbra, Portugal), Ph.D. Heliana Teixeira (IMAR–CMA, University of Coimbra, Portugal), Ph.D. Irene Martins (IMAR–CMA, University of Coimbra, Portugal). (Invited by Prof. João Carlos Marques) (Mestrado)
2010 - 2010 “Avaliação do Estado Ecológico das Massas de Água Costeiras e de Transição e do Potencial Ecológico das Massas de Água Fortemente Modificadas. Sistemas de classificação e resultados provisórios de estado de qualidade ecológica das massas de água Portuguesas" 3rd December, INAG, Lisboa, Portugal. (Outros) Agência Portuguesa do Ambiente, Portugal
2010 - 2010 Practical classes of the discipline “Marine Biology and Ecology”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra. (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2009 - 2009 Theoretical and practical classes of the discipline “Algae and Fungi” (The use of macroalgae in quality assessment: the Marine Macroalgae Assessment Tool – MarMAT), integrated in the Biology graduation of the Department of Botany, University of Coimbra. (Invited by Prof. Leonel Pereira) Algae and Fungi (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2009 - 2009 Practical classes of the discipline “Marine Biology and Ecology”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra. (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2008 - 2008 “Environmental management of ecosystems”. Coimbra (Portugal), from 28th April to 9th May, in cooperation with Professor João Carlos Marques (University of Coimbra, Portugal - coordinator), Professor Sven Erik Jørgensen (Royal School of Pharmacy, Copenhagen, Denmark), Professor Pattern (University of Towson, USA), Professor Brian Fath (University of Towson, USA), Ph.D. Joana Patrício (IMAR – CIC, Portugal). (Invited by Prof. João Carlos Marques) Environmental management of ecosystems (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2008 - 2008 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2007 - 2007 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2006 - 2006 “Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management”. Coimbra (Portugal), from 5th to 16th June, in cooperation with Professor Miguel Ângelo Pardal (University of Coimbra, Portugal - coordinator), Professor Mogens Rene Flindt (University of Southern Denmark, Denmark), Ph.D. Ana Isabel Lillebø (IMAR – CIC, Portugal) and Ph.D. Irene Martins (IMAR – CIC, Portugal). (Invited by Prof. Miguel Pardal) Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems managemen (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2005 - 2005 “Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management”. Coimbra (Portugal), from 23rd May to 3rd June, in cooperation with Professor Miguel Ângelo Pardal (University of Coimbra, Portugal - coordinator), Professor Mogens Rene Flindt (University of Southern Denmark, Denmark), Ph.D. Ana Isabel Lillebø (IMAR – CIC, Portugal) and Ph.D. Irene Martins (IMAR – CIC, Portugal). (Invited by Prof. Miguel Pardal) Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2005 - 2005 Lecturer of practical classes of the discipline “Hydrobiology”, integrated in the Biology graduation of the Instituto Superior de Educação, Praia, Cape Verde. (Invited by Prof. Ana Maria Almada) Biology graduation of the Instituto Superior de Educação, Praia, Cape Verde (Licenciatura) IMAR - Institute of Marine Research (CMA), Portugal
2004 - 2004 “Introduction to ecological modelling concepts.” Integrated in project MEDCORE (ICA3 2002-10003) - From river catchment areas to the sea: a comparative and integrated approach to the ecology of Mediterranean coastal zones for sustainable management. Tunis (Tunisia), from 30th September to 3rd October, in cooperation with Professor Sven Erik Jørgensen (Royal School of Pharmacy, Copenhagen, Denmark) and Professor João Carlos Marques (University of Coimbra, Portugal - coordinator). (Invited by Prof. João Carlos Marques) Introduction to ecological modelling concepts (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2004 - 2004 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2003 - 2003 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2002 - 2002 “Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management”. Coimbra (Portugal), from 10th to 22nd June, in cooperation with Professor Miguel Ângelo Pardal (University of Coimbra, Portugal - coordinator), Professor Mogens Rene Flindt (University of Southern Denmark, Denmark), Ph.D. Ana Isabel Lillebø (IMAR – CIC, Portugal) and Ph.D. Irene Martins (IMAR – CIC, Portugal) (Laboratory and technical support). (Invited by Prof. Miguel Pardal) Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2002 - 2002 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2001 - 2001 “Feedback mechanisms between autotrophic/heterotrophic processes and nutrient dynamics. The use of mass balances in aquatic ecosystems”. Coimbra (Portugal), from 3rd to 15th July, in cooperation with Professor Miguel Ângelo Pardal (University of Coimbra, Portugal - coordinator), Professor Mogens Rene Flindt (University of Southern Denmark, Denmark), Ph.D. Ana Isabel Lillebø (IMAR – CIC, Portugal) and Ph.D. Irene Martins (IMAR – CIC, Portugal) (Laboratory and technical support). (Invited by Prof. Miguel Pardal) Feedback mechanisms between autotrophic/heterotrophic processes and nutrient dynamics. The use of mass balances in aquatic ecosystems (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2001 - 2001 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal
2000 - 2000 “Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management”. Coimbra (Portugal), from 2nd to 14th July, in cooperation with Professor Miguel Ângelo Pardal (University of Coimbra, Portugal - coordinator), Professor Mogens Rene Flindt (University of Southern Denmark, Denmark), Ph.D. Ana Isabel Lillebø (IMAR – CIC, Portugal) and Ph.D. Irene Martins (IMAR – CIC, Portugal) (Laboratory and technical support). (Invited by Prof. Miguel Pardal) Feedback mechanisms and nutrient dynamics. The use of mass balances in aquatic systems management (Mestrado) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2000 - 2000 Invited lecturer of practical classes of the discipline “Hidrobiologia”, integrated in the Biology graduation of the Department of Zoology, University of Coimbra (Portugal), (Invited by Prof. João Carlos Marques) Biologia (Licenciatura) Universidade de Coimbra Departamento de Ciências da Vida, Portugal

IMAR - Institute of Marine Research (CMA), Portugal

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2019 - 2022 “Coastal Lagoons: Ecology & Restoration (CLEAR)”, Coordinator Dr. Brendan O'Connor from AQUAFACT International Services Ltd. EPA-funded project. Environmental Protection Agency, Dublin, Ireland. Environmental Protection Agency Regional Inspectorate Dublin, Ireland Environmental Protection Agency Regional Inspectorate Dublin
2016 - 2019 "Saltmarsh Function and Human Impacts in Relation to Ecological Status (SAMFHIRES)", Coordinator Phillip Perrin from Botanical, Environmental and Conservation (BEC) Consultants Ltd. EPA-funded project: 2015-W-MS-19. Environmental Protection Agency, Dublin, Ireland.
Specialist
 Environmental Protection Agency Regional Inspectorate Dublin, Ireland Environmental Protection Agency Regional Inspectorate Dublin

Interview (tv / radio show)

Program Topic
2023/06/08 - 2023/06/08 Porto Canal (Manhã Informativa). Porto, Portugal, 8th June 2023 World Oceans Day, Interview in Porto Canal (Manhã Informativa).

Journal scientific committee

Journal title (ISSN) Publisher
2022 - Current SUSTAINABILITY; SI "Water System Pollution: Monitoring and Control"
2022 - Current Frontiers in Marine Science - Marine Ecosystem Ecology Frontiers in Marine Science
2020 - Current WATER - SI: The Ecological Assessment of Rivers and Estuaries. Present and Future (2073-4441) MDPI
2019 - Current Ecological Indicators - SI: MARINE INVADERS – assessment and impacts on aquatic ecosystems (1470_160X) Elsevier
2017 - 2018 Ecological Indicators - SI: Biomarkers: Tools/endpoints to detect environmental and toxicological stressors (1470_160X) Elsevier
2014 - 2015 CRC Press - Marine Algae: Biodiversity, Taxonomy, Environmental Assessment, and Biotechnology (9781466581678) Taylor & Francis Group
2009 - 2009 WIT Press - Ecological Indicators for Coastal and Estuarine Environmental Assessment. A user guide. (978-1-84564-209-9) WIT Press

Other jury / evaluation

Activity description Institution / Organization
2023 - 2023 Board of Project’s Final Report Evaluation. “Coastal Lagoons: Ecology & Restoration (CLEAR)”, Coordinator Dr. Brendan O'Connor from AQUAFACT International Services Ltd. EPA-funded project. Environmental Protection Agency, Dublin, Ireland
2023 - 2023 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Doctoral individual grants’ application 2023 (Natural Sciences / Biological Sciences)
2022 - 2022 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Doctoral individual grants’ application 2022 (Natural Sciences / Biological Sciences). Fundo Regional para a Ciência e Tecnologia, Portugal
2021 - 2021 MARE-Mini Grants, from Marine and Environmental Sciences Centre, Scientifc Project grants’ application 2021, for outreach and dissemination of scientific activities from MARE MARE - Marine and Environmental Sciences Centre, Portugal
2021 - 2021 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Doctoral individual grants’ application 2021 (Natural Sciences / Biological Sciences)
2020 - 2020 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Doctoral individual grants’ application 2020 (Biological Sciences; Social Sciences). Fundo Regional para a Ciência e Tecnologia, Portugal
2020 - 2020 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Doctoral individual grants’ application 2020 (Support to integration of recente Ph.D. graduated). Fundo Regional para a Ciência e Tecnologia, Portugal
2018 - 2018 Fundação para a Ciência e a Tecnologia, Doctoral individual grants’ application (Biological Sciences). Fundação para a Ciência e a Tecnologia, Portugal
2017 - 2017 Fundo Regional para a Ciência e Tecnologia, from Governo Regional dos Açores, Post-Doc individual grants’ application 2016 (Biological Sciences). Fundo Regional para a Ciência e Tecnologia, Portugal
2016/02/01 - 2016/02/01 Sucesso reprodutor e ecologia alimentar de Chilreta (Sternula albifrons) na Ria Formosa, Algarve, Portugal. (Ana Correia; M.Sc. thesis project evaluation; Thesis project on Master in Sciences in Ecology, Faculty of Sciences and Technology, University of Coimbra - Portugal) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2015/07/17 - 2015/07/17 Coastal Zone Integrated Management, from theory to practice. Avencas Beach, Cascais. (PhD Thesis project evaluation; Claudia Caro; University of Coimbra - Portugal). Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2013/09/10 - 2013/09/10 Coastal Zone Integrated Management, from theory to practice. Avencas Beach, Cascais. (PhD Thesis project evaluation; Ana Margarida Ferreira; University of Coimbra - Portugal) Universidade de Coimbra Departamento de Ciências da Vida, Portugal
2013/03/21 - 2013/03/21 Estrutura de comunidades vegetais a partir de atributos funcionais em serra do Semiárido paraibano, Brasil. (Vitor Leite Martins; MSc Thesis evaluation project; Pos-graduation programme in Ecology and Conservation of the Stadual University of Paraíba, Brazil) Universidade Estadual da Paraiba, Brazil
2013/03/21 - 2013/03/21 Composição, similaridade florística e síndrome de dispersão em afloramento rochoso no agreste paraibano. (Elainne Cristina Silva Costa; MSc Thesis evaluation project; Pos-graduation programme in Ecology and Conservation of the Stadual University of Paraíba, Brazil) Universidade Estadual da Paraiba, Brazil
2013/03/21 - 2013/03/21 Diversidade de anuros e especialização individual na dieta em área de Mata Atlântica no Estado da Paraíba. (Brygida Carolyne Freire Alves. MSc Thesis evaluation project; Pos-graduation programme in Ecology and Conservation of the Stadual University of Paraíba, Brazil) Universidade Estadual da Paraiba, Brazil
2013/03/21 - 2013/03/21 Regeneração e acúmulo de biomassa aérea no Semiárido brasileiro. (Mayara Guimarães Beltrão; MSc Thesis evaluation project; Pos- graduation programme in Ecology and Conservation of the Stadual University of Paraíba, Brazil) Universidade Estadual da Paraiba, Brazil
Distinctions

Other distinction

2014 Reviewer for the scientific journals: Acta Oecologica, Aquatic Botany, Deep Shelf Research 2, Desalination, Ecological Indicators; Environmental Science & Policy, Estuaries and Coasts, Estuarine Coastal and Shelf Science, Hydrobiologia, Journal of Applied