???global.info.a_carregar???
My research field focuses on One-Health, with a concern for the surveillance of antimicrobial resistance to critical antibiotics. Acting in different veterinary sectors such as food-animal production, pet animals, and wild animals and their potential impact on human and animal health, animal welfare, food safety and environment. My main research areas are One-health, Public Health, Veterinary Science, Microbiology, Food Safety and Bioinformatics.
Identification

Personal identification

Full name
MARISA ISABEL RIBEIRO DE ALMEIDA

Citation names

  • Ribeiro-Almeida, M

Author identifiers

Ciência ID
0412-00C5-88B4
ORCID iD
0000-0002-8209-8624

Email addresses

  • mra.microvet@gmail.com (Professional)

Knowledge fields

  • Medical and Health Sciences - Health Sciences - Public and Environmental Health
  • Agrarian Sciences - Veterinary Sciences

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Advanced (C1)
Spanish; Castilian Intermediate (B1) Advanced (C1) Intermediate (B1) Intermediate (B1)
Education
Degree Classification
2019/11/01 - 2024/04/30
Ongoing
 Doctoral Degree in Biomedical Sciences (Doutoramento)
Major in Biomedical Sciences
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2022/07/07 - 2022/07/08
Concluded
 Moving beyond single species outbreaks: the role of mobile genetic elements (Outros)
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2021/10/05 - 2022/02/02
Concluded
 Comunicar ciência - Ciências da vida e da saúde (Outros)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
 18
2020/05/04 - 2020/05/08
Concluded
 Molecular Bioinformatics - Pratical Course (Outros)
Universidade do Porto Faculdade de Medicina, Portugal
 17
2010/09/14 - 2016/04/18
Concluded
 Master in Veterinary Medicine (Mestrado integrado)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
"Clínica e cirurgia de animais exóticos" (THESIS/DISSERTATION)
 16
2006/09/15 - 2009/06/30
Concluded
 Biology (Licenciatura)
Universidade de Aveiro Departamento de Biologia, Portugal
"Análise dos padrões de alimentação de um espécime de Delphinus delphis em recuperação" (THESIS/DISSERTATION)
 16
Affiliation

Science

Category
Host institution 		Employer
2019/11/04 - Current Researcher (Research) REQUIMTE, Portugal
Universidade do Porto Faculdade de Farmácia, Portugal
2019/04/18 - 2019/10/18 Researcher (Research) 3B's Research Group, Portugal
3B's Research Group, Portugal
2018/09/01 - 2019/03/31 Researcher (Research) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2019/01/21 - 2019/02/01 Research Trainee (Research) Instituto Nacional de Saúde Doutor Ricardo Jorge IP, Portugal
Instituto Nacional de Saúde Doutor Ricardo Jorge IP, Portugal

Others

Category
Host institution 		Employer
2017/09/01 - 2019/04/18 Professor of the course Veterinary care assistant Formação SA, Portugal
Formação SA, Portugal
2016/06/01 - 2018/04/01 Clinical Veterinarian Clínica veterinária de Vizela, Portugal
Projects

Grant

Designation Funders
2021/09/01 - 2022/08/31 One Health in practice: studying the persistence of Enterobacteriaceae with zoonotic potential in poultry farms using ITM or OTM feed to prevent their transfer into the human food chain
IJUP2021-SOJA DE PORTUGAL-14
PhD Student Fellow
Concluded
2019/11/04 - 2020/11/01 SafestPoultry: understanding the impact of organic versus inorganic zinc and copper formulas use at farm level in the safety of marketed poultry-meat
IJUP-Empresas-17-SOJA PORTUGAL
PhD Student Fellow
Universidade do Porto Faculdade de Farmácia, Portugal

REQUIMTE, Portugal

Universidade do Porto Faculdade de Ciências da Nutrição e Alimentação, Portugal
PP-IJUP2018- SOJA DE PORTUGAL
Concluded
2018/09/20 - 2019/02/28 Estudo de prevalência de Campylobacter spp e Helicobacter pullorum em frangos: entre a produção primária e a expedição.
GRANT_NUMBER: PP-IJUP2017- SOJA DE PORTUGAL -32
Researcher
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
 PP-IJUP2017- SOJA DE PORTUGAL -32
Concluded

Other

Designation Funders
2018/10/01 - 2019/09/01 Identification of antimicrobial multiresistance bacteria (E. coli, Salmonella spp. and Campylobacter spp.) in seagulls
Não definido
Researcher
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Universidade do Porto Faculdade de Farmácia, Portugal
Ongoing
2019/02/01 - 2019/08/31 Prevalence and antibiotic resistance of E. coli, Salmonella spp. and Campylobacter spp. in wild boar and deer
Não definido
Researcher
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Universidade do Porto Faculdade de Farmácia, Portugal
Ongoing
Outputs

Publications

Conference abstract
  1. Ribeiro-Almeida, M; Monteiro, E; Ribeiro, S; Rebelo, Andreia; Pereira, B; Baptista, C; Peixe, L; Novais, Carla; Antunes, Patrícia. "Occurrence of colistin resistant and copper tolerant Enterobacteriaceae in 2-year colistin-free chicken farms using feed formula with inorganic or organic copper". Paper presented in 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), 2021.
  2. Ribeiro-Almeida, M; Novais, Ângela; Mourão, Joana; Joana Freitas-Silva; Ribeiro, S; Ugarcina-Perovic, ; da Costa, PM; Peixe, L; Antunes, Patrícia. "MCR-1 in gulls is associated with diverse emerging zoonotic E. coli clonal lineages and plasmids enriched in antibiotic resistance genes, metal operons and virulence factors". Paper presented in World Microbe Forum / the FEMS2021 Congress, 2021.
  3. Ribeiro-Almeida, M; Joana Freitas da Silva; Ribeiro, Sofia; Perovic, SU; Novais, Ângela; Peixe, L; Martins da Costa, Paulo; Antunes, Patrícia. "Emergence of mcr-1 among diverse multidrug-resistant Escherichia coli in gulls from a coastal city uncovers potentially underestimated transmission routes". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases, Paris, 2020.
    Accepted
  4. Santos-Ferreira, Nânci; Costa, Micael; Ribeiro-Almeida, Marisa; Joana Freitas da Silva (6C12-DB6C-65C4); Martins da Costa, Paulo. "Estudo de prevalência de Campylobacter spp e Helicobacter pullorum em frangos: entre a produção primária e a expedição.". Paper presented in IJUP 2019, Porto, 2019.
Conference poster
  1. Mourão, Joana; Ribeiro-Almeida, M; Magalhães, Mafalda; Rebelo, Andreia; Novais, Carla; Peixe, L; Novais, Ângela; Antunes, Patrícia. "Genomic Diversity of Klebsiella pneumoniae in Chicken Production Chain: Antibiotic Resistance and Metal Tolerance Interplay". Paper presented in MICROBIOTEC´23 - Portuguese Congress of Microbiology and Biotechnology, 2023.
  2. Ribeiro-Almeida, M; de Carvalho, André Pinto; Mourão, Joana; da Costa, Paulo Martins; Peixe, L; Antunes, Patrícia. "Long-term persistence of mcr-1 carrying Escherichia coli in intensive rabbit farms after colistin ban". Paper presented in MICROBIOTEC´23 - Portuguese Congress of Microbiology and Biotechnology, 2023.
  3. Ribeiro-Almeida, M; Carvalho, AP; Martins da Costa, Paulo; Luísa Maria Vieira Peixe; Antunes, Patrícia. Corresponding author: Ribeiro-Almeida, M. "Colistin resistant Klebsiella pneumoniae in intensive rabbit farms after colistin ban". Paper presented in FEMS 2023 – Federation of European Microbiological Societies,, 2023.
  4. Magalhaes, M; Ribeiro-Almeida, M; Mourão, Joana; Rebelo, Andreia; Luísa Maria Vieira Peixe; Novais, Ângela; Novais, Carla; Antunes, Patrícia. "From farm-to-fork: occurrence of persistent multidrug-resistant and copper-tolerant Klebsiella pneumoniae clones in poultry farms". Paper presented in 33 rd European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), 2023.
  5. Mourão, Joana; Ribeiro-Almeida, M; Magalhaes, M; Rebelo, Andreia; Freitas, Ana R; Novais, Carla; Luísa Maria Vieira Peixe; Novais, Ângela; Antunes, Patrícia. "In depth genomic analysis of Klebsiella pneumoniae from intensive poultry production: an understudied non-clinical setting". Paper presented in 33 rd European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), 2023.
  6. Magalhães, Mafalda; Ribeiro-Almeida, M; Mourão, Joana; Rebelo, Andreia; Lopes, D; Paiva, S; Peixe, L; et al. "From farm-to-fork: occurrence of multidrug-resistant and copper-tolerant Klebsiella pneumoniae successful clones in poultry farms". Paper presented in 33rd ECCMID European Congress of Clinical Microbiology and Infectious Diseases, 2023.
  7. Ribeiro-Almeida, M; Magalhães, M; Mourão, Joana; Paiva, S; Freitas, AR; Novais, Carla; Luísa Maria Vieira Peixe; Antunes, Patrícia. "Raw pet food: new human transmission route for Salmonella 1,4,[5],12:i:- and mcr-1 genes in Europe". Paper presented in 32nd European Congress of Clinical Microbiology & Infectious Diseases, 2022.
  8. Ribeiro-Almeida, M; Pinto de Carvalho, A; Ribeiro, R; da Costa, PM; Peixe, L; Antunes, Patrícia. "Occurrence of Escherichia coli carrying mcr in intensive rabbit farms after colistin ban". Paper presented in One Health EJP Annual Scientific Meeting, 2022.
  9. Rebelo, Andreia; Duarte, Bárbara; Baptista, Carina; Ribeiro-Almeida, M; Monteiro, Eulália; Pereira, Beatriz; Ribeiro, Sofia; et al. "Impact of organic and inorganic copper feed formulations in the selection of copper tolerant and multidrug resistant Enterococcus faecium from poultry farms and meat available to consumers". Paper presented in 31st European Congress of Clinical Microbiology and Infectious Diseases, 2021.
  10. Ribeiro-Almeida, M; Novais, Ângela; Monteiro, E; Ribeiro, S; Rebelo, Andreia; Baptista, C; Peixe, L; Novais, Carla; Antunes, Patrícia. "Diverse colistin resistant and copper tolerant Klebsiella pneumoniae global high-risk clones in poultry farms". Paper presented in World Microbe Forum / the FEMS2021 Congress, 2021.
  11. Ribeiro-Almeida, M; Santos-Ferreira, Nânci; Costa, Micael; Félix, Pedro; Joana Freitas da Silva (6C12-DB6C-65C4); Oleastro, Mónica; Martins da Costa, Paulo. "Sensitivity of qPCR and classical culturable method in Campylobacter detection in poultry samples". Paper presented in Congress of Microbiology and Biotechnology 2019, 2019.
  12. Ribeiro-Almeida, M; Costa, Micael; Santos-Ferreira, Nânci; Freitas-Silva, Joana; Oleastro, Mónica; Martins da Costa, Paulo. "Helicobacter pullorum in poultry - An emerging zoonotic agent". Paper presented in 1º Simpósio INIAV para a segurança alimentar – “Rumo à alimentação do futuro”, 2019.
  13. Almeida, Marisa; Duarte, Ana; Ferreira, Marisa; Vingada, José V.; & Soares, AMVM. "Common dolphin feeding behaviour under rehabilitation". Paper presented in 38th Annual Symposium of European Association for Aquatic Mammals, 2010.
Journal article
  1. Inês C. Rodrigues; Ana Paula Cristal; Marisa Ribeiro-Almeida; Leonor Silveira; Joana C. Prata; Roméo Simões; Paulo Vaz-Pires; Ângela Pista; Paulo Martins da Costa. "Gulls in Porto Coastline as Reservoirs for Salmonella spp.: Findings from 2008 and 2023". Microorganisms (2023): https://doi.org/10.3390/microorganisms12010059.
    10.3390/microorganisms12010059
  2. Joana Mourão; Marisa Ribeiro-Almeida; Carla Novais; Mafalda Magalhães; Andreia Rebelo; Sofia Ribeiro; Luísa Peixe; et al. "From Farm to Fork: Persistence of Clinically Relevant Multidrug-Resistant and Copper-Tolerant Klebsiella pneumoniae Long after Colistin Withdrawal in Poultry Production". Microbiology Spectrum (2023): https://doi.org/10.1128/spectrum.01386-23.
    10.1128/spectrum.01386-23
  3. Rodrigues, Inês C.; Ribeiro-Almeida, M; Ribeiro, Jorge; Silveira, Leonor; Prata, Joana C.; Pista, Angela; Martins da Costa, Paulo. Corresponding author: Martins da Costa, Paulo. "Occurrence of Multidrug-Resistant Bacteria Resulting from the Selective Pressure of Antibiotics: A Comprehensive Analysis of ESBL K. pneumoniae and MRSP Isolated in a Dog with Rhinorrhea". Veterinary Sciences 10 5 (2023): 326. http://dx.doi.org/10.3390/vetsci10050326.
    Published • 10.3390/vetsci10050326
  4. Marisa Ribeiro-Almeida; Joana Mourão; Ângela Novais; Sofia Pereira; Joana Freitas-Silva; Sofia Ribeiro; Paulo Martins da Costa; Luísa Peixe; Patrícia Antunes. "High diversity of pathogenic Escherichia coli clones carrying mcr-1 among gulls underlines the need for strategies at the environment–livestock–human interface". Environmental Microbiology 24 10 (2022): 4702-4713. http://dx.doi.org/10.1111/1462-2920.16111.
    10.1111/1462-2920.16111
Newsletter article
  1. Ribeiro-Almeida, M; Mourão, Joana; Novais, Ângela; Pereira, Sofia; Freitas-Silva, Joana; Ribeiro, Sofia; Martins da Costa, Paulo; Peixe, L; Antunes, Patrícia. "Gull droppings undermine efforts to control spread of colistin-resistance genes", The Microbiologist, 2022, https://www.the-microbiologist.com/news/gull-droppings-undermine-efforts-to-control-spread-of-colistin-resistance-genes/339.article.
Online resource
  1. Mourão, Joana; Ribeiro-Almeida, M; Novais, Carla; Magalhães, Mafalda; Rebelo, Andreia; Ribeiro, Sofia; Peixe, L; Novais, Ângela; Antunes, Patrícia. Occurrence of Klebsiella pneumoniae from poultry-associated environment. Whole genome shotgun sequencing project of 20 Klebsiella pneumoniae genomes deposited at DDBJ/ENA/GenBank. BioProject PRJEB60418. 2023. https://www.ebi.ac.uk/ena/browser/view/PRJEB60418.
  2. Mourão, Joana; Magalhães, Mafalda; Ribeiro-Almeida, M; Andreia Rebelo; Novais, Carla; Peixe, L; Novais, Ângela; Antunes, Patrícia. WGS analysis of Klebsiella pneumoniae from intensive poultry production chain. Whole genome shotgun sequencing project of 48 Klebsiella pneumoniae genomes deposited at DDBJ/ENA/GenBank. BioProject PRJEB62836. 2023. https://www.ebi.ac.uk/ena/browser/view/PRJEB62836.
  3. Ribeiro-Almeida, M; Magalhães, Tatiana Mafalda; Mourão, Joana; Paiva, Sofia; Freitas, Ana R; Novais, Carla; Peixe, L; Antunes, Patrícia. Escherichia coli isolate R26_1_100, whole genome shotgun sequencing project deposited at Enterobase. Uberstrain number: ESC_YA9777AA. 2022. https://enterobase.warwick.ac.uk/.
  4. Ribeiro-Almeida, M; Magalhães, Tatiana Mafalda; Mourão, Joana; Paiva, Sofia; Freitas, Ana R; Novais, Carla; Peixe, L; Antunes, Patrícia. Escherichia coli isolate R52_8, whole genome shotgun sequencing project deposited at Enterobase. Uberstrain number: ESC_YA9779AA. 2022. https://enterobase.warwick.ac.uk/.
Preprint
  1. Joana Mourão; Mafalda Magalhães; Marisa Ribeiro-Almeida; Andreia Rebelo; Carla Novais; Luísa Peixe; Ângela Novais; Patrícia Antunes. "DecodingKlebsiella pneumoniaein Poultry Chain: Unveiling Genetic Landscape, Antibiotic Resistance, and Biocide Tolerance in Non-Clinical Reservoirs". 2024. https://doi.org/10.1101/2024.01.23.576544.
    10.1101/2024.01.23.576544
  2. Ribeiro-Almeida, M; Mourão, Joana; Magalhães, Mafalda; Freitas, Ana R.; Novais, Carla; Peixe, Luísa; Antunes, Patricia. "Raw Meat-Based Diet for Pets: A Neglected Source of Human Exposure to Salmonella and Mcr-Carrying Escherichia Coli in Europe". 2023. http://dx.doi.org/10.2139/ssrn.4532439.
    10.2139/ssrn.4532439
Thesis / Dissertation
  1. Almeida, Marisa. "Clínica e Cirurgia de Animais Exóticos". Master, Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, 2016. https://sigarra.up.pt/ffup/pt/pub_geral.show_file?pi_doc_id=42261.
Activities

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2021/09/01 - 2022/04/21 One Health insights: colistin-resistant E. coli and Klebsiella spp. in companion animals and calves and prevalence of Campylobacter spp. in companion animals
Co-supervisor
 Veterinary Medicine (Master)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2022/06/25 - 2022/11/26 Microsummit'22 - a pioneering initiative of the Portuguese Society of Microbiology (2022/11/25)
Conference (Member of the Organising Committee)
 Sociedade Portuguesa de Microbiologia, Portugal
2022/04/01 - 2022/09/30 73rd Annual Meeting of EAAP (2022/09/04 - 2022/09/09)
Meeting (Member of the Organising Committee)
 Associação Portuguesa de Engenharia Zootécnica, Portugal
2022/02/27 - 2022/06/28 One MUN - One Health (2022/06/27 - 2022/06/28)
Meeting (Member of the Organising Committee)
 Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2013/10/07 - 2013/12/08 III Jornadas de Medicina Veterinária - Toxicologia (2013/12/07 - 2013/12/08)
Congress
 Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2021/07/27 Assessment of feline exposure to Leishmania infection in Qatar: comparison of serological response to different Leishmania spp. crude soluble antigens
(Thesis) Main arguer
 Joana Margarida Ribeiro Silva (Other)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Universidade do Porto Faculdade de Ciências, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2017/09/28 - 2019/06/01 Trainer of the Veterinary Medicine Assistant course Trainer of the Veterinary Medicine Assistant course (Curso Técnico Superior Profissional) SA Formação, Portugal
2017/09/01 - 2019/04/15 Trainer for the Veterinary Assistant Technical Course (Curso de Especialização Tecnológica)
Distinctions

Award

2021 Travel Grant, 31th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2021 FEMS Congress Attendance grant
Federation Of European Microbiological Societies, United Kingdom
2020 Travel Grant, 30th European Congress of Clinical Microbiology and Infectious Diseases
European Congress of Clinical Microbiology and Infectious Diseases, France