Catarina Maria Pinto Mora Pinto de Magalhães (3C14-E01A-33CE)

Curriculum Vitae

Catarina Maria Pinto Mora Pinto de Magalhães

I am a senior researcher of CIIMAR, invited assistant professor at the Faculty of Sciences, University of Porto where I teach biology undergraduate degree and master programs since 2016. I am also member of the coordination committee of Portuguese Polar Program and member of the Polar Expert Group (PEG) from the EU-PolarNet2. I began my scientific studies with my MSc and PhD at University of Porto in collaboration with Marine Science Department of University of Georgia, USA, and my scientific career consolidated with two postdoctoral fellowships (in collaboration with University of South Alabama, USA and University of Waikato, NZ) awarded by Portuguese Science and Technology Foundation (FCT), followed by a FCT Starting Grant (IF/2013-2018) and and a FCT Employment Stimulus (2020.03139.CEECIND; Assistant Research Level). Currently, I lead a research team within my affiliated associated lab (CIIMAR), composed by three post doctoral researchers, 11 graduated students (5PhD and 6MSc) and two 2 PhD candidates. I also coordinate CIIMAR Blue Young Talent programs (BYT, BYTplus, BYTPhD), where students have the opportunity to work at CIIMAR within a scientific environment of excellence. I am working on microbial ecology and biogeochemistry with a main focus on the Nitrogen cycle and the communities responsible for N transformations in different ecosystems including the Polar Regions (Arctic and Antarctica). Contributions from my research were published in several international journals and presented in multiple national and international meetings and invited talks. I have experience in leading or co-leading scientific projects and in participating as a team member or core team member in several national and international projects. I participated and co-leaded international microbiome metagenomic analysis consortia, and I have solid collaborations with international scientists within my specialized area of research (e.g. Univ. of Georgia and Alabama, USA; Univ. of Waikato, NZ; Norwegian Polar Institute, NW) and in complementary scientific research areas such as Bioinformatics (MPI, EMBL, IGC), engineering (FEUP, INESC-TEC) and big data analytics (FCUP-UP, Big Data Institute of DAL University). I have also promoted the dialogue between scientists and society by participating in Citizen Science Initiatives, and in numerous outreach activities on behalf of CIIMAR and PROPOLAR projects.

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Identificação

Identificação pessoal

Nome completo: Catarina Maria Pinto Mora Pinto de Magalhães

Nomes de citação

Magalhães, Catarina

Identificadores de autor

Ciência ID: 3C14-E01A-33CE
Google Scholar ID: https://scholar.google.com/citations?hl=pt-PT&user=_PfoEUgAAAAJ
Researcher Id: https://orcid.org/0000-0001-9576-2398
Scopus Author Id: https://www.scopus.com/authid/detail.uri?authorId=22980541800

Endereços de correio eletrónico

catarina.magalhaes@fc.up.pt (Profissional)
catarinamagalhaes1972@gmail.com (Pessoal)

Telefones

Telefone

223 401 81 (Profissional)

Telemóvel

962480529 (Pessoal)

Moradas

CIIMAR - Novo Edificio do Terminal de Cruzeiros do Porto de Leixões Avenida General Norton de Matos, S/N, 4450-208, Matosinhos, Porto, Portugal (Profissional)
Rua Rodrigues Lobo 50 Hab 1.4, 4150-638, Porto, Porto, Portugal (Pessoal)

Websites

https://www2.ciimar.up.pt/team.php?id=85 (Profissional)
https://scholar.google.com/citations?hl=pt-PT&user=_PfoEUgAAAAJ&view_op=list_works&sortby=pubdate (Profissional)

Domínios de atuação

Ciências Naturais - Outras Ciências Naturais

Idiomas

Idioma	Conversação	Leitura	Escrita	Compreensão	Peer-review
Português (Idioma materno)
Inglês	Utilizador proficiente (C1)	Utilizador proficiente (C1)	Utilizador proficiente (C1)	Utilizador proficiente (C1)	Utilizador proficiente (C1)
Espanhol; Castelhano	Utilizador proficiente (C1)	Utilizador proficiente (C1)	Utilizador elementar (A2)	Utilizador proficiente (C1)	Utilizador elementar (A2)

Formação

	Grau	Classificação
2015/05 - 2015/05 Concluído	Summer school: from sampling to analyzing microbial diversity and function (Outros) Hellenic Centre for Marine Research (HCMR), Grécia
2015 - 2015 Concluído	Microbial Metagenomics Analysis (Outros) European Bioinformatics Institute, Reino Unido
2008 - 2008 Concluído	Course on Molecular Methods to Study Complex Microbial Communities (Outros) Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal
2006/01/05 Concluído	Ciências do Meio Aquático – Biologia e Ecologia (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal "Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro estuary: processes and communities." (TESE/DISSERTAÇÃO)	Aprovado, máxima distinção
2005 - 2005 Concluído	Course on Molecular Evolution (Outros) Centro de Ciências do Mar, Portugal
2000/07 - 2000/07 Concluído	Summer Course on Sediment/Water Interfaces in Freshwater Lakes: Sampling, Handling and Analyzing with Emphasizes on Gases (Outros) Leibniz-Institut für Gewässerökologie und Binnenfischerei, Alemanha
1999/09/08 Concluído	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal "Oxygen and Nutrient Fluxes between Intertidal Sediment-Water Interfaces in the Douro River Estuary, Portugal. University of Porto, Portugal." (TESE/DISSERTAÇÃO)	Aprovado, máxima distinção
1997 - 1997 Concluído	Course on Applications of Flow Cytometry Technics (Curso de Especialização Tecnológica) Universidade do Porto Faculdade de Ciências, Portugal
1995 Concluído	Biologia (Licenciatura) Universidade do Porto Faculdade de Ciências, Portugal	14

Percurso profissional

Docência no Ensino Superior

	Categoria Profissional Instituição de acolhimento	Empregador
2022/08/01 - Atual	Professor Auxiliar (Docente Universitário)	Universidade do Porto Faculdade de Ciências, Portugal
	Universidade do Porto Faculdade de Ciências, Portugal
2016/09 - 2022/08	Professor Auxiliar Convidado (Docente Universitário)	Universidade do Porto Faculdade de Ciências, Portugal
	Universidade do Porto Faculdade de Ciências, Portugal

Cargos e Funções

	Categoria Profissional Instituição de acolhimento	Empregador
2016/01 - Atual	Research Associate	University of Waikato Department of Biological Sciences, Nova Zelândia
	University of Waikato Department of Biological Sciences, Nova Zelândia
2013/06 - 2022/07	Investigador Auxiliar	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2019/04 - 2020	Visiting Researcher	Ocean Frontier Institute, Canadá
	Ocean Frontier Institute, Canadá
2006/01 - 2013/05	Postdoctoral Researcher	Centro Interdisciplinar de Investigação Marinha e Ambiental da Madeira, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

Outros

	Categoria Profissional Instituição de acolhimento	Empregador
2013/11 - Atual	Member of the Coordination Committee of Portuguese Polar Program (PROPOLAR)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014/01 - 2023	Member of the Coordination Committee of the undergraduate and graduate Blue Young Talent programs (CIIMAR)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2019 - 2020	Mobility	Ocean Frontier Institute, Canadá

2014/01 - 2016	Member of the Scientific Council of the Doctoral Program in Environmental Sciences and Technology	Universidade do Porto Faculdade de Ciências, Portugal
	Universidade do Porto Faculdade de Ciências, Portugal
2015/09 - 2015/12	Mobility	University of Waikato Department of Biological Sciences, Nova Zelândia

2014/01 - 2015/12	Coordinator of the Portuguese participation in the Global initiative of Ocean Sampling Day (OSD)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014/01 - 2015/12	Portuguese focal point and coordinator of the International Citizen Science Initiative Ocean sampling Day (MyOSD)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014/09 - 2014/09	Mobility	University of Waikato Department of Biological Sciences, Nova Zelândia

2013/04 - 2013/04	Mobility	University of South Alabama, Department of Marine Sciences, Estados Unidos

2012/04 - 2012/04	Mobility	University of Waikato Department of Biological Sciences, Nova Zelândia

2008/01 - 2008/08	Mobility	University of Waikato Department of Biological Sciences, Nova Zelândia

2006/11 - 2006/11	Mobility	Dauphin Island Sea Lab, Estados Unidos

2004/05 - 2004/05	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos

2003/10 - 2003/11	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos

2002/08 - 2002/08	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos
	University of Georgia, Department of Marine Sciences, Estados Unidos
2001/05 - 2001/05	Mobility	University of Rhode Island Department of Biological Sciences, Estados Unidos

2001/03 - 2001/04	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos

1999/09 - 1999/12	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos

1998/02 - 1998/03	Mobility	University of Georgia, Department of Marine Sciences, Estados Unidos

1998 - 1998	Mobility	Universidade de Lisboa Centro de Oceanografia, Portugal

Projetos

Bolsa

	Designação	Financiadores
2020/10/01 - Atual	ATLANTIDA - Platform for the monitoring of the North Atlantic ocean and tools for the sustainable exploitation of the marine resources NORTE-01- 0145-FEDER-000040 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Comissao de Coordenacao e Desenvolvimento Regional do Norte Em curso
2020/01/01 - Atual	TINYARCTIC - Deciphering the Plankton Microbiome and its Functions in a Changing Arctic na Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2019/09 - Atual	GENIUSAMPLER: An autonomous biosampler to capture in situ aquatic microbiomes POCI-01-0145-FEDER-042850 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Comissao de Coordenacao e Desenvolvimento Regional do Norte Em curso
2019 - Atual	FeedMi - Improvements in disease resistance, stress and environmental sustainability in aquaculture systems through nutritional and modulation tools of microbial communities 39948 FeedMi Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Regional Development Fund Em curso
2019 - Atual	NITROLIMIT - Life at the edge: define the boundaries of the Nitrogen Cycle in the Extreme AntarcticT errestrial Environments. PTDC/CTA-AMB/30997/2017 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2017 - Atual	EMSO PT – European Multidisciplinary Seafloor and Water Column Observatory PINFRA/22157/2016 Investigador Instituto Português do Mar e da Atmosfera, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2024/03/01 - 2028/02/29	CO-CREATING AREA-BASED MANAGEMENT FRAMEWORK TO PROTECT AND RESTORE MARINE ECOSYSTEMS AND BIODIVERSITY ACROSS THE ATLANTIC AND ARCTIC SEA BASINS 101157341 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Em curso
2024/03/01 - 2027/02/28	E-DNA, Microbiomes, Photogrammetry and Hormones - Assessment Techniques In Cetaceans BiodivMon/0006/2022 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2024 - 2027	TwinDEEPS - Deep-sea exploration and observation n/a Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Em curso
2024/01/01 - 2026/12/31	SILICARBONCLIM - Biogenic silica and carbon sequestration in the Antarctic region - biogeochemical balance of nutrients and climate change CNPq/MCTI/FNDCT 082023 Investigador Universidade de São Paulo Centro de Biologia Marinha, Brasil	Em curso
2023/03/12 - 2026/03/11	N-MICROARCTIC - Nitrogen Microbiome in the Changing Arctic 2022.02983.PTDC Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2023 - 2026	NETTAG+ - PREVENTING, AVOIDING AND MITIGATING ENVIRONMENTAL IMPACTS OF FISHING GEAR AND ASSOCIATED MARINE LITTER 101112812 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Em curso
2023 - 2026	MAR2PROTECT - Preventing groundwater contamination related to global and climate change through a holistic approach on managed aquifer recharge GA 101082048 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Em curso
2023 - 2025	MAPS - Measurements and modeling of the atmospheric and oceanic boundary layers at the northern Antarctic Peninsula during the Year of Polar Prediction Special observing periods 2022.09201.PTDC Investigador	Fundação para a Ciência e a Tecnologia Em curso
2023 - 2025	DeepResist - Metal impacts on the resistance and denitrification transcriptome of deep-sea model bacteria 2022.06475.PTDC Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2021/07/01 - 2024/06/30	PERMAMERC - Mercury Biogeochemistry, Fate and Impact in Permafrost Thaw Ecosystems PTDC/CTA-AMB/4744/2020 Investigador Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2021/03/20 - 2024/03/19	CONNECT2OCEANS - Connecting Atlantic and Arctic Oceans to Decipher Climate Change Impact on Plankton Microbiome Functions. PTDC/CTA-AMB/4946/2020 Investigador responsável	Fundação para a Ciência e a Tecnologia Em curso
2021/09/01 - 2023/08/31	MIDFun - Metal impacts on deep-sea microbial communities and function 101032399 Orientador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	EU Framework Programme for Research and Innovation Marie Sklodowska-Curie Actions Em curso
2021 - 2023	OCEAN3R – Reduce pressures, restore and regenerate the NW-Portuguese ocean and waters NORTE-01-0145-FEDER-000064 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Comissao de Coordenacao e Desenvolvimento Regional do Norte Em curso
2021 - 2022	ARTICOMICS: Metagenomics guided discovery of chemical diversity in the Arctic PROPOLAR - 2020 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	PROPOLAR-Programa Polar Português Em curso
2019 - 2021	NetTAG - Tagging fishing gears and enhancing on-board best-practices to promote waste free fisheries EASME/EMFF/2017/1.2.1.12/S2/013 Investigador	Executive Agency for Small and Medium-sized Enterprises
2018 - 2021	SPO3-Development of innovative sustainable protein and omega-3 rich feedstuffs for aquafeeds, from local agro-industrial by-products PTDC/BAA-AGR/30377/2017 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Comissao de Coordenacao e Desenvolvimento Regional do Norte Em curso
2018 - 2021	BIOREM - Bioremediation of hydrocarbon pollutants by autochthonous microorganisms in aquatic environment 02/SAICT/2017/n. 032186 Investigador	Comissao de Coordenacao e Desenvolvimento Regional do Norte
2018 - 2020	ROSM - Sistema robótico de mitigação de derrame de crude NORTE-01-0145-FEDER-024055 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2017 - 2020	MarRISK - Adaptacion Costera Ante el Cambio Climático: conocer los riesgos y aumentar la resiliencia. 0262_MARRISK_1_E Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Regional Development Fund Em curso
2019/08 - 2019/08	Participation in the Expedition to the Arctic Ocean - MOSj-ICE2019 Cruise. Norwegian Polar Institute MOSJ2019 Investigador Norsk Polarinstitutt, Noruega	Norsk Polarinstitutt Concluído
2019 - 2019	NITROPENGUIN - How does the location of penguin colonies in Antarctic coastal environments dictate Nitrogen extent of dispersion in terrestrial environments? na Investigador	Fundação para a Ciência e a Tecnologia Concluído
2018 - 2019	NANOSED - Adsorption of metallic nanoparticles to estuarine sediments: what implication for denitrification? POCI-01-0145-FEDER-030131 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Comissao de Coordenacao e Desenvolvimento Regional do Norte Concluído
2017 - 2019	SpilLess - First-line response to oil spills based on native microorganism cooperation. na Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Maritime and Fisheries Fund Concluído
2016 - 2019	RAS-ORGMAR - Developing water treatment technology for land based closed containment systems(LBCC-RAS) to increase efficiency by reducing the negative effects of organic matter. ERA-NET program Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2018/07 - 2018/07	Participation in the Expedition to the Arctic Ocean - MOSj-ICE2018 Cruise. Norwegian Polar Institute MOSJ2018 Investigador Norsk Polarinstitutt, Noruega	Norsk Polarinstitutt Fundação para a Ciência e a Tecnologia Concluído
2018/05 - 2018/06	Participation in the Expedition to the Pacific Ocean - SOINeTOS Cruise. Schmidt Ocean Institute SOINeTOS Cruise Investigador Schmidt Ocean Institute, Estados Unidos	Schmidt Ocean Institute Concluído
2017 - 2018	NetOS - A Shipboard OceanSpace Center for Networked Multi-Vehicle Ocean Science. NetOS - SOI Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Schmidt Ocean Institute
2017 - 2018	EMOSE 2017 - Inter-comparison of Marine Plankton Metagenomic Methods. EMOSE Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Marine Research Network Concluído
2016 - 2018	MarInfo - Integrated Platform for Marine Data Acquisition and Analysis NORTE-01-0145-FEDER-000031 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Regional Development Fund
2016 - 2018	BLUEandGREEN - Boosting scientific excellence and innovation capacity in biorefineries based on marine resources. na Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Concluído
2016 - 2018	CORAL - Sustainable Ocean Exploitation: Tools and Sensors NORTE-01-0145-FEDER-000036 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Regional Development Fund
2016 - 2018	ECOSERVICES - Assessing the environmental quality, vulnerability and risks for the sustainable management of the NW coast natural resources and ecosystem services in a changing world NORTE-07-0124-FEDER-000038 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Regional Development Fund Concluído
2016 - 2018	NITRONICE - Biogeochemistry of Nitrogen in the Arctic Ocean: Processes and Communities. na Investigador responsável	Fundação para a Ciência e a Tecnologia Concluído
2017/08 - 2017/08	Participation in the Expedition to the Arctic Ocean - MOSj-ICE2017 Cruise. Norwegian Polar Institute MOSJ2017 Investigador Norsk Polarinstitutt, Noruega	Fundação para a Ciência e a Tecnologia Norsk Polarinstitutt Concluído
2017/07 - 2017/07	Participation in the Expedition to the Arctic Ocean - Glaciar Front Cruise. Norwegian Polar Institute. na Investigador Norsk Polarinstitutt, Noruega	Norsk Polarinstitutt Concluído
2013/01/01 - 2017/01/01	Cost Action ES1302 . European Networks on Ecological Functions of Trace Metals in Anaerobic Biotechnologies. ES1302 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Horizon 2020 Concluído
2016 - 2017	BIOAIR - Aerobiology over Antarctica ACE Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Swiss Polar Institute Concluído
2015 - 2017	MarinEye - A prototype for multitrophic oceanic monitoring. PT02-Aviso4-0017 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	EEA Grants
2014 - 2017	Biodiversity in seamounts: the Madeira-Tore and Great Meteor PT02-Aviso2-0001 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	EEA Grants
2014/01/01 - 2016/12/31	BioMar PT - Aprender a conhecer o ambiente marinho de Portugal.Principal Investigator PT02-Aviso6-0003 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	EEA Grants Concluído
2016/07 - 2016/08	Participation in the Expedition to the Arctic Ocean - MOSj-ICE2016 Cruise. Norwegian Polar Institute MOSJ 2016 Investigador Norsk Polarinstitutt, Noruega	Fundação para a Ciência e a Tecnologia Norsk Polarinstitutt Concluído
2015 - 2016	N-ICE2015: Ecosystem dynamics in a high-Arctic pack ice environment. N-ICE Investigador Norsk Polarinstitutt Biblioteket, Noruega	Norsk Polarinstitutt Biblioteket
2013 - 2016	NITROEXTREM -Nitrogen Cycle in Extreme Antarctic Terrestrial Environments: Processes, Communities and environmental constraints na Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2013/01/01 - 2015/12/31	ECORISC - Ecological Risk Assessment of Oils and Hazardous and Noxious Substances in the NWPortuguese Coast. NORTE-07-0124-FEDER-000038 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Centro Interdisciplinar de Investigação Marinha e Ambiental da Madeira Concluído
2011/01/01 - 2015/12/31	ECO-IAS: Ecosystem-level impacts of an invasive alien species. PTDC/AAC-AMB/116685/2010 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2011 - 2015	NITROTOX - Interference of Metals and PAHs in Nitrate Removal Biological Processes: Denitrification vs Anammox PTDC/AAC-AMB/113973/2009 Investigador responsável	Fundação para a Ciência e a Tecnologia
2011 - 2014	AMOX - Relative importance of archaeal and bacterial ammonia oxidizers in estuarine ecosystem function: the role of environmental controls. PTDC/MAR/112723/2009 Investigador responsável	Fundação para a Ciência e a Tecnologia Concluído
2013/01 - 2013/02	Participation in the Antarctic expedition to Dry Valleys - Mission K020. Mission K020 Investigador University of Waikato, Nova Zelândia	Antarctica New Zealand Fundação para a Ciência e a Tecnologia Concluído
2010 - 2013	NITROSUL - Novel interaction between marine biogeochemical nitrogen and sulfur cycles: characterization and ecological implications. PTDC/MAR/098914/2008 Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2010/01 - 2012/12	PHYTOBIO - Phytoremediation and bioremediation of contaminants in salt marshes: plant - microorganisms interactions PTDC/MAR/099140/2008 Investigador Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Coordination Action to Foster Prevention and Best Response to Accidental Marine Pollution (AMPERA) Concluído
2010/01 - 2012/12	CHOLERA – Towards the understanding of Vivrio cholerae dynamics and controls in tropical African wells (Guinea-Bissau) PTDC/AAC-CLI/103539/2008 Investigador Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2010 - 2011	Do Planctomycetes contribute to the global warming: aspects of their involvement in the biogeochemical cycles. n/a Investigador Universidade do Porto Faculdade de Ciências, Portugal	Universidade do Porto Concluído
2008 - 2011	OILDBEACH - Buried fuel in the intertidal beach zone: coupling between beach morphodynamic, natural degradation, forcing mechanisms and biological activity. CTM 2008-02699 E Investigador Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	European Coordination Action to Foster Prevention and Best Response to Accidental Marine Pollution (AMPERA) Concluído
2010/01/01 - 2010/12/31	Microbial Life in Extreme Antarctica Environments. na Investigador responsável	Banco Santander Totta Concluído
2007 - 2010	Role of rocky biofilms/water column interface for the carbon and nitrogen cycles in an eutrophic estuarine environment. PTDC/MAR/66292/2006 Bolseiro de Doutoramento Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	Fundação para a Ciência e a Tecnologia Concluído
1998 - 2001	Effects of cooling water discharge on the water quality of the Crestuma reservoir. Sampling Program and laboratory analysis n/a Bolseiro de Mestrado Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal	Thermoelectric Company

Projeto

	Designação	Financiadores
2021/06/01 - 2027/05/31	Research Contract for Assistant Researcher - Estímulo ao Emprego Científico 2020.03139.CEECIND Investigador responsável Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Em curso
2014 - 2018	An emerging view of nitrogen cycle: processes, communities, environmental controls and anthropogenic impacts IF/00862/2012/CP0152/CT002 Investigador responsável	Fundação para a Ciência e a Tecnologia
2012 - 2013	NITROGEN CYCLE IN EXTREME ANTARCTIC TERRESTRIAL ENVIRONMENTS: PROCESSES, COMMUNITIES AND ENVIRONMENTAL CONSTRAINTS SFRH/BPD/76989/2011 Bolseiro de Pós-Doutoramento Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia
2006 - 2012	Nova interacção entre os ciclos biogeoquímicos marinhos do azoto e enxofre: caracterização e implicações ecológicas SFRH/BPD/14929/2004 Investigador Pós-doutorado Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluído
2001 - 2006	Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro estuary: processes and communities SFRH/BD/1397/2000 Bolseiro de Doutoramento Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia

Produções

Publicações

Artigo em conferência	Martins, Alfredo; Almeida, Carlos; Carneiro, António; Silva, Pedro; Marques, Pedro; Lima, Ana Paula; Almeida, José Miguel; Magalhães, Catarina. "eDNA Survey in the Arctic with an Autonomous Underwater Vehicle". 2024. 10.1109/oceans51537.2024.10682273 Martins, Alfredo; Almeida, Carlos; Carneiro, António; Silva, Pedro; Marques, Pedro; Lima, Ana Paula; Almeida, José Miguel; Magalhães, Catarina. "eDNA Survey in the Arctic with an Autonomous Underwater Vehicle". 2024. 10.1109/oceans51537.2024.10682273 Carneiro, António; Silva, Guilherme; Marques, Pedro; Marques, André; Dias, Nuno; Almeida, Carlos; Magalhães, Catarina; Martins, Alfredo. "Biosampler IS-ABS: eDNAuto filtration unit for vehicle integration (v2.0)". 2023. 10.1109/oceanslimerick52467.2023.10244269 Costa, Maria Joao; Pinto, Jose; Dias, Paulo Sousa; Pereira, Joao; Lima, Keila; Ribeiro, Manuel; Sousa, Joao Borges; et al. "Field Report: Exploring Fronts with Multiple Robots". Trabalho apresentado em IEEE OES AUV Conference, 2019. 10.1109/auv.2018.8729780 Dias, A.; Mucha, A. P.; Santos, T.; Pedrosa, D.; Amaral, G.; Ferreira, H.; Oliveira, A.; et al. "ROSM - Robotic Oil Spill Mitigations". Trabalho apresentado em OCEANS 2019, 2019. 10.1109/oceanse.2019.8867213 Geraldes, Pedro; Barbosa, Joel; Martins, Alfredo; Dias, Andre; Magalhaes, Catarina; Ramos, Sandra; Silva, Eduardo. "In situ real-time Zooplankton Detection and Classification". OCEANS 2019, 2019. 10.1109/oceanse.2019.8867552 Martins, Alfredo; Dias, Andre; Silva, Eduardo; Ferreira, Hugo; Dias, Ireneu; Almeida, Jose Miguel; Torgo, Luis; et al. "MarinEye — A tool for marine monitoring". 2016. 10.1109/oceansap.2016.7485624
Artigo em revista	Pascoal, Francisco; Branco, Paula; Torgo, Luís; Costa, Rodrigo; Magalhães, Catarina. "Definition of the microbial rare biosphere through unsupervised machine learning". Communications Biology 8 1 (2025): https://doi.org/10.1038/s42003-025-07912-4. 10.1038/s42003-025-07912-4 Pavloudi, Christina; Santi, Ioulia; Azua, Iñigo; Baña, Zuriñe; Bastianini, Mauro; Belser, Caroline; Bilbao, Jone; et al. "First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples". Biodiversity Data Journal 13 (2025): https://doi.org/10.3897/bdj.13.e143585. 10.3897/bdj.13.e143585 Gambardella, Nicola; Costa, Joana; Martins, Beatriz Malcata; Folhas, Diogo; Ribeiro, Ana Patrícia; Hintelmann, Holger; Canário, João; Magalhães, Catarina. "The role of prokaryotic mercury methylators and demethylators in Canadian Arctic thermokarst lakes". Scientific Reports 15 1 (2025): https://doi.org/10.1038/s41598-025-89438-7. 10.1038/s41598-025-89438-7 Vitorino, Inês Rosado; Gambardella, Nicola; Semedo, Miguel; Magalhães, Catarina; Lage, Olga Maria. "Diversity and Vertical Distribution of Planctomycetota in the Water Column of the Remote North Pacific". Environmental Microbiology Reports 17 1 (2025): https://doi.org/10.1111/1758-2229.70063. 10.1111/1758-2229.70063 Lopes, Eva; Semedo, Miguel; Tomasino, Maria Paola; Mendes, Renato; de Sousa, João Borges; Magalhães, Catarina. "Horizontal distribution of marine microbial communities in the North Pacific Subtropical Front". Frontiers in Microbiology 15 (2024): https://doi.org/10.3389/fmicb.2024.1455196. 10.3389/fmicb.2024.1455196 Almeida, C. Marisa R.; Perdigão, Rafaela; Correia, Bárbara Ribeiro; Van Der Gracht, Henry; Dias, Sofia; Magalhães, Catarina; Carvalho, Maria F.; et al. "Potential of fishing nets for adsorption of inorganic (Cu and Pb) and organic (PAHs) pollutants". Marine Pollution Bulletin 209 (2024): 117291. https://doi.org/10.1016/j.marpolbul.2024.117291. 10.1016/j.marpolbul.2024.117291 Afonso, Luís; Costa, Joana; Correia, Ana Mafalda; Valente, Raul; Lopes, Eva; Tomasino, Maria Paola; Gil, Ágatha; et al. "Environmental DNA as a complementary tool for biodiversity monitoring: A multi-technique and multi-trophic approach to investigate cetacean distribution and feeding ecology". PLOS ONE 19 10 (2024): e0300992. https://doi.org/10.1371/journal.pone.0300992. 10.1371/journal.pone.0300992 Santos, Beatriz; Afonso, Luís; Alves, Filipe; Dinis, Ana; Ferreira, Rita; Correia, Ana M.; Valente, Raul; et al. "Hidden in the blow - a matrix to characterise cetaceans’ respiratory microbiome: short-finned pilot whale as case study". Metabarcoding and Metagenomics 8 (2024): https://doi.org/10.3897/mbmg.8.121060. 10.3897/mbmg.8.121060 Pascoal, Francisco; Duarte, Pedro; Assmy, Philipp; Costa, Rodrigo; Magalhães, Catarina. "Full-length 16S rRNA gene sequencing combined with adequate database selection improves the description of Arctic marine prokaryotic communities". Annals of Microbiology 74 1 (2024): https://doi.org/10.1186/s13213-024-01767-6. 10.1186/s13213-024-01767-6 Baptista, Mafalda S.; Lee, Charles K.; Monteiro, Maria R.; Torgo, Luís; Cary, S. Craig; Magalhães, Catarina. "Soils of two Antarctic Dry Valleys exhibit unique microbial community structures in response to similar environmental disturbances". Environmental Microbiome 19 1 (2024): https://doi.org/10.1186/s40793-024-00587-0. 10.1186/s40793-024-00587-0 Perdigão, Rafaela; Tomasino, Maria Paola; Magalhães, Catarina; Carvalho, Maria F.; Almeida, C. Marisa R.; Mucha, Ana P.. "Microbial response to a port fuel spill: Community dynamics and potential for bioremediation". Marine Pollution Bulletin 203 (2024): 116434. https://doi.org/10.1016/j.marpolbul.2024.116434. 10.1016/j.marpolbul.2024.116434 Perdigão, Rafaela; Tomasino, Maria Paola; Magalhães, Catarina; Carvalho, Maria F.; Almeida, C. Marisa R.; Mucha, Ana P.. "Microbial response to a port fuel spill: Community dynamics and potential for bioremediation". Marine Pollution Bulletin 203 (2024): 116434. https://doi.org/10.1016/j.marpolbul.2024.116434. 10.1016/j.marpolbul.2024.116434 Pascoal, Francisco; Tomasino, Maria Paola; Piredda, Roberta; Quero, Grazia Marina; Torgo, Luís; Poulain, Julie; Galand, Pierre E.; et al. "Inter-comparison of marine microbiome sampling protocols". ISME Communications 3 1 (2023): http://dx.doi.org/10.1038/s43705-023-00278-w. 10.1038/s43705-023-00278-w Carneiro, João; Pascoal, Francisco; Semedo, Miguel; Pratas, Diogo; Tomasino, Maria Paola; Rego, Adriana; Carvalho, Maria de Fátima; Mucha, Ana Paula; Magalhães, Catarina. "Mapping human pathogens in wastewater using a metatranscriptomic approach". Environmental Research 231 (2023): 116040. http://dx.doi.org/10.1016/j.envres.2023.116040. 10.1016/j.envres.2023.116040 Almeida, Diana Bastos; Semedo, Miguel; Magalhães, Catarina; Blanquet, Isidro; Mucha, Ana Paula. "Sole microbiome progression in a hatchery life cycle, from egg to juvenile". Frontiers in Microbiology 14 (2023): http://dx.doi.org/10.3389/fmicb.2023.1188876. 10.3389/fmicb.2023.1188876 Pizarro, Leonor; Magalhães, Catarina; Almeida, C Marisa R; Carvalho, Maria de Fátima; Semedo, Miguel. "Cadmium effects on net N2O production by the deep-sea isolate Shewanella loihica PV-4". FEMS Microbiology Letters 370 (2023): http://dx.doi.org/10.1093/femsle/fnad047. 10.1093/femsle/fnad047 Bastos Almeida, Diana; Semedo, Miguel; Magalhães, Catarina; Blanquet, Isidro; Mucha, Ana Paula. "The network of nitrifying and pathogenic prokaryotic interactions in a recirculating aquaculture system of a sole (Solea senegalensis) hatchery". Frontiers in Marine Science 9 (2022): http://dx.doi.org/10.3389/fmars.2022.1038196. 10.3389/fmars.2022.1038196 Pascoal, Francisco; Areosa, Inês; Torgo, Luís; Branco, Paula; Baptista, Mafalda S.; Lee, Charles K.; Cary, S. Craig; Magalhães, Catarina. "The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert". Frontiers in Microbiology 13 (2022): http://dx.doi.org/10.3389/fmicb.2022.927129. 10.3389/fmicb.2022.927129 Pascoal, Francisco; Areosa, Inês; Torgo, Luís; Branco, Paula; Baptista, Mafalda S.; Lee, Charles K.; Cary, S. Craig; Magalhães, Catarina. "The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert". Frontiers in Microbiology 13 (2022): http://dx.doi.org/10.3389/fmicb.2022.927129. 10.3389/fmicb.2022.927129 Pascoal, Francisco; Costa, Rodrigo; Assmy, Philipp; Duarte, Pedro; Magalhães, Catarina. "Exploration of the Types of Rarity in the Arctic Ocean from the Perspective of Multiple Methodologies". Microbial Ecology 84 1 (2022): 59-72. http://dx.doi.org/10.1007/s00248-021-01821-9. 10.1007/s00248-021-01821-9 Pinto, José; Costa, Maria; Mendes, Renato; Lima, Keila; Dias, Paulo; Pereira, João; Ribeiro, Manuel; et al. "Coordinated Robotic Exploration of Dynamic Open Ocean Phenomena". Field Robotics (2022): Aceite para publicação Rego, Adriana; Fernandez-Guerra, Antonio; Duarte, Pedro; Assmy, Philipp; Leão, Pedro N.; Magalhães, Catarina. "Secondary metabolite biosynthetic diversity in Arctic Ocean metagenomes". Microbial Genomics 7 12 (2021): http://dx.doi.org/10.1099/mgen.0.000731. 10.1099/mgen.0.000731 Tomasino, Maria Paola; Semedo, Miguel; Vieira e Moreira, Pedro; Ferraz, Elza; Rocha, Adelaide; Carvalho, Maria F.; Magalhães, Catarina; Mucha, Ana P.. "SARS-CoV-2 RNA detected in urban wastewater from Porto, Portugal: Method optimization and continuous 25-week monitoring". Science of The Total Environment 792 (2021): 148467. http://dx.doi.org/10.1016/j.scitotenv.2021.148467. 10.1016/j.scitotenv.2021.148467 Almeida, Diana Bastos; Magalhães, Catarina; Sousa, Zélia; Borges, Maria Teresa; Silva, Eliane; Blanquet, Isidro; Mucha, Ana Paula. "Microbial community dynamics in a hatchery recirculating aquaculture system (RAS) of sole (Solea senegalensis)". Aquaculture 539 (2021): 736592. http://dx.doi.org/10.1016/j.aquaculture.2021.736592. 10.1016/j.aquaculture.2021.736592 Bôto, Maria L.; Magalhães, Catarina; Perdigão, Rafaela; Alexandrino, Diogo A. M.; Fernandes, Joana P.; Bernabeu, Ana M.; Ramos, Sandra; et al. "Harnessing the Potential of Native Microbial Communities for Bioremediation of Oil Spills in the Iberian Peninsula NW Coast". Frontiers in Microbiology 12 (2021): http://dx.doi.org/10.3389/fmicb.2021.633659. 10.3389/fmicb.2021.633659 Semedo, Miguel; Lopes, Eva; Baptista, Mafalda S.; Oller-Ruiz, Ainhoa; Gilabert, Javier; Tomasino, Maria Paola; Magalhães, Catarina. "Depth Profile of Nitrifying Archaeal and Bacterial Communities in the Remote Oligotrophic Waters of the North Pacific". Frontiers in Microbiology 12 (2021): http://dx.doi.org/10.3389/fmicb.2021.624071. 10.3389/fmicb.2021.624071 Pascoal, Francisco; Magalhães, Catarina; Costa, Rodrigo. "The Link Between the Ecology of the Prokaryotic Rare Biosphere and Its Biotechnological Potential". Frontiers in Microbiology 11 (2021): http://dx.doi.org/10.3389/fmicb.2020.00231. 10.3389/fmicb.2020.00231 Pascoal, Francisco; Costa, Rodrigo; Magalhães, Catarina. "The microbial rare biosphere: current concepts, methods and ecological principles". FEMS Microbiology Ecology 97 1 (2021): http://dx.doi.org/10.1093/femsec/fiaa227. 10.1093/femsec/fiaa227 Costa, Joana; Sousa, António G. G.; Carneiro, Ana Carolina; Mucha, Ana Paula; Almeida, C. Marisa R.; Magalhães, Catarina; Baptista, Mafalda S.. "Emerging investigator series: prompt response of estuarine denitrifying bacterial communities to copper nanoparticles at relevant environmental concentrations". Environmental Science: Nano (2021): http://dx.doi.org/10.1039/d0en01160f. 10.1039/d0en01160f Maria Paola Tomasino; Miguel Semedo; Pedro Vieira; Elza Ferraz; Adelaide Rocha; Maria de Fátima Carvalho; Magalhães, Catarina; Ana Paula Mucha. "Continuous monitoring of SARS-CoV-2 RNA in urban wastewater from Porto, Portugal: sampling and analysis protocols". bioRxiv (2021): https://doi.org/10.1101/2021.04.06.21254994. Acesso aberto • Publicado Santos, João Pereira; Sousa, António G. G.; Ribeiro, Hugo; Magalhães, Catarina. "The Response of Estuarine Ammonia-Oxidizing Communities to Constant and Fluctuating Salinity Regimes". Frontiers in Microbiology 11 (2020): http://dx.doi.org/10.3389/fmicb.2020.574815. 10.3389/fmicb.2020.574815 Monteiro, Maria; S. Baptista, Mafalda; Séneca, Joana; Torgo, Luís; K. Lee, Charles; Cary, S. Craig; Magalhães, Catarina. "Understanding the Response of Nitrifying Communities to Disturbance in the McMurdo Dry Valleys, Antarctica". Microorganisms 8 3 (2020): 404. http://dx.doi.org/10.3390/microorganisms8030404. 10.3390/microorganisms8030404 Pascoal, Francisco; Magalhães, Catarina; Costa, Rodrigo. "The Link Between the Ecology of the Prokaryotic Rare Biosphere and Its Biotechnological Potential". Frontiers in Microbiology 11 (2020): http://dx.doi.org/10.3389/fmicb.2020.00231. 10.3389/fmicb.2020.00231 Rego, Adriana; Sousa, António G. G.; Santos, João P.; Pascoal, Francisco; Canário, João; Leão, Pedro N.; Magalhães, Catarina. "Diversity of Bacterial Biosynthetic Genes in Maritime Antarctica". Microorganisms 8 2 (2020): 279. http://dx.doi.org/10.3390/microorganisms8020279. 10.3390/microorganisms8020279 Martins, Teresa P.; Ramos, Vitor; Hentschke, Guilherme S.; Castelo-Branco, Raquel; Rego, Adriana; Monteiro, Maria; Brito, Ângela; et al. "The Extremophile Endolithella mcmurdoensis gen. et sp. nov. (Trebouxiophyceae, Chlorellaceae), A New Chlorella -like Endolithic Alga From Antarctica". Journal of Phycology 56 1 (2019): 208-216. http://dx.doi.org/10.1111/jpy.12940. 10.1111/jpy.12940 Ribeiro, Hugo; Martins, Alfredo; Gonçalves, Marco; Guedes, Maurício; Tomasino, Maria Paola; Dias, Nuno; Dias, André; et al. "Development of an autonomous biosampler to capture in situ aquatic microbiomes". PLOS ONE 14 5 (2019): e0216882. http://dx.doi.org/10.1371/journal.pone.0216882. 10.1371/journal.pone.0216882 Rego, Adriana; Raio, Francisco; Martins, Teresa P.; Ribeiro, Hugo; Sousa, António G. G.; Séneca, Joana; Baptista, Mafalda S.; et al. "Actinobacteria and Cyanobacteria Diversity in Terrestrial Antarctic Microenvironments Evaluated by Culture-Dependent and Independent Methods". Frontiers in Microbiology 10 (2019): http://dx.doi.org/10.3389/fmicb.2019.01018. 10.3389/fmicb.2019.01018 de Sousa, António Gaspar G.; Tomasino, Maria Paola; Duarte, Pedro; Fernández-Méndez, Mar; Assmy, Philipp; Ribeiro, Hugo; Surkont, Jaroslaw; et al. "Diversity and Composition of Pelagic Prokaryotic and Protist Communities in a Thin Arctic Sea-Ice Regime". Microbial Ecology 78 2 (2019): 388-408. http://dx.doi.org/10.1007/s00248-018-01314-2. 10.1007/s00248-018-01314-2 Santos, J.P.; Mendes, D.; Monteiro, M.; Ribeiro, H.; Baptista, M.S.; Borges, M.T.; Magalhães, C.. "Salinity impact on ammonia oxidizers activity and amoA expression in estuarine sediments". Estuarine, Coastal and Shelf Science 211 (2018): 177-187. http://dx.doi.org/10.1016/j.ecss.2017.09.001. 10.1016/j.ecss.2017.09.001 Ribeiro, Hugo; da Silva, Joana Gomes; Jesus, João; Magalhães, Catarina; Dias, Joana M.; Danko, Anthony S.. "Biodegradation of biodiesel and toluene under nitrate-reducing conditions and the impact on bacterial community structure". Journal of Soils and Sediments 19 1 (2018): 439-450. http://dx.doi.org/10.1007/s11368-018-2079-z. 10.1007/s11368-018-2079-z Rocha, Inês; Ma, Ying; Carvalho, Maria F.; Magalhães, Catarina; Janoušková, Martina; Vosátka, Miroslav; Freitas, Helena; Oliveira, Rui S.. "Seed coating with inocula of arbuscular mycorrhizal fungi and plant growth promoting rhizobacteria for nutritional enhancement of maize under different fertilisation regimes". Archives of Agronomy and Soil Science 65 1 (2018): 31-43. http://dx.doi.org/10.1080/03650340.2018.1479061. 10.1080/03650340.2018.1479061 Ribeiro, Hugo; de Sousa, Trelita; Santos, João P.; Sousa, António G.G.; Teixeira, Catarina; Monteiro, Maria R.; Salgado, Paula; et al. "Potential of dissimilatory nitrate reduction pathways in polycyclic aromatic hydrocarbon degradation". Chemosphere 199 (2018): 54-67. http://dx.doi.org/10.1016/j.chemosphere.2018.01.171. 10.1016/j.chemosphere.2018.01.171 Monteiro, M; Séneca, J; Torgo, L; Cleary, DFR; Gomes, NCM; Santoro, AE; Magalhães, C. "Environmental controls on estuarine nitrifying communities along a salinity gradient". Aquatic Microbial Ecology 80 2 (2017): 167-180. http://dx.doi.org/10.3354/ame01847. 10.3354/ame01847 Portugal, Francisco S.; Dias, Joana M.; Ribeiro, Hugo; Magalhães, Catarina; Mucha, Ana P.; Danko, Anthony S.. "Anaerobic Biodegradation of Ethylic and Methylic Biodiesel and Their Impact on Benzene Degradation". CLEAN - Soil, Air, Water 45 6 (2017): 1600264. http://dx.doi.org/10.1002/clen.201600264. 10.1002/clen.201600264 Ribeiro, Hugo; Mucha, Ana P.; Azevedo, Isabel; Salgado, Paula; Teixeira, Catarina; Almeida, C. Marisa R.; Joye, Samantha B.; Magalhães, Catarina. "Differential effects of crude oil on denitrification and anammox, and the impact on N2O production". Environmental Pollution 216 (2016): 391-399. http://dx.doi.org/10.1016/j.envpol.2016.05.045. 10.1016/j.envpol.2016.05.045 Teixeira, Catarina; Magalhães, Catarina; Joye, Samantha B.; Bordalo, Adriano A.. "Response of anaerobic ammonium oxidation to inorganic nitrogen fluctuations in temperate estuarine sediments". Journal of Geophysical Research: Biogeosciences 121 7 (2016): 1829-1839. http://dx.doi.org/10.1002/2015jg003287. 10.1002/2015jg003287 Costa, Maria Sofia; Rego, Adriana; Ramos, Vitor; Afonso, Tiago B.; Freitas, Sara; Preto, Marco; Lopes, Viviana; et al. "The conifer biomarkers dehydroabietic and abietic acids are widespread in Cyanobacteria". Scientific Reports 6 1 (2016): http://dx.doi.org/10.1038/srep23436. 10.1038/srep23436 Pearce, David A.; Alekhina, Irina A.; Terauds, Aleks; Wilmotte, Annick; Quesada, Antonio; Edwards, Arwyn; Dommergue, Aurelien; et al. "Aerobiology Over Antarctica – A New Initiative for Atmospheric Ecology". Frontiers in Microbiology 7 (2016): http://dx.doi.org/10.3389/fmicb.2016.00016. 10.3389/fmicb.2016.00016 Ribeiro, Hugo; Almeida, C. Marisa R.; Magalhães, Catarina; Bordalo, Adriano A.; Mucha, Ana P.. "Salt marsh sediment characteristics as key regulators on the efficiency of hydrocarbons bioremediation by Juncus maritimus rhizospheric bacterial community". Environmental Science and Pollution Research 22 1 (2015): 450-462. http://dx.doi.org/10.1007/s11356-014-3388-4. 10.1007/s11356-014-3388-4 Kopf, Anna; Bicak, Mesude; Kottmann, Renzo; Schnetzer, Julia; Kostadinov, Ivaylo; Lehmann, Katja; Fernandez-Guerra, Antonio; et al. "The ocean sampling day consortium". GigaScience 4 1 (2015): http://dx.doi.org/10.1186/s13742-015-0066-5. 10.1186/s13742-015-0066-5 Salgado, P.; Visnevschi-Necrasov, T.; Kiene, R.P.; Azevedo, I.; Rocha, A.C.S.; Almeida, C.M.R.; Magalhães, C.. "Determination of 3-mercaptopropionic acid by HPLC: A sensitive method for environmental applications". Journal of Chromatography B 992 (2015): 103-108. http://dx.doi.org/10.1016/j.jchromb.2015.04.008. 10.1016/j.jchromb.2015.04.008 Salgado, Paula; Kiene, Ronald; Wiebe, William; Magalhães, Catarina. "Salinity as a regulator of DMSP degradation in Ruegeria pomeroyi DSS-3". Journal of Microbiology 52 11 (2014): 948-954. http://dx.doi.org/10.1007/s12275-014-4409-1. 10.1007/s12275-014-4409-1 Magalhães, Catarina M.; Machado, Ana; Frank-Fahle, Beatrice; Lee, Charles K.; Cary, S. Craig. "The ecological dichotomy of ammonia-oxidizing archaea and bacteria in the hyper-arid soils of the Antarctic Dry Valleys". Frontiers in Microbiology 5 (2014): http://dx.doi.org/10.3389/fmicb.2014.00515. 10.3389/fmicb.2014.00515 Monteiro, Maria; Séneca, Joana; Magalhães, Catarina. "The history of aerobic ammonia oxidizers: from the first discoveries to today". Journal of Microbiology 52 7 (2014): 537-547. http://dx.doi.org/10.1007/s12275-014-4114-0. 10.1007/s12275-014-4114-0 Almeida, C. Marisa R.; Mucha, Ana P.; da Silva, Marta Nunes; Monteiro, Maria; Salgado, Paula; Necrasov, Tatiana; Magalhães, Catarina. "Salt marsh plants as key mediators on the level of cadmium impact on microbial denitrification". Environmental Science and Pollution Research 21 17 (2014): 10270-10278. http://dx.doi.org/10.1007/s11356-014-2953-1. 10.1007/s11356-014-2953-1 Teixeira, Catarina; Magalhães, Catarina; Joye, Samantha B.; Bordalo, Adriano A.. "The contribution of anaerobic ammonium oxidation to nitrogen loss in two temperate eutrophic estuaries". Estuarine, Coastal and Shelf Science 143 (2014): 41-47. http://dx.doi.org/10.1016/j.ecss.2014.03.023. 10.1016/j.ecss.2014.03.023 Reis, Izabela; Almeida, C. Marisa R.; Magalhães, Catarina M.; Cochofel, Jaqueline; Guedes, Paula; Basto, M. Clara P.; Bordalo, Adriano A.; Mucha, Ana P.. "Bioremediation potential of microorganisms from a sandy beach affected by a major oil spill". Environmental Science and Pollution Research 21 5 (2013): 3634-3645. http://dx.doi.org/10.1007/s11356-013-2365-7. 10.1007/s11356-013-2365-7 Mucha, Ana P.; Teixeira, Catarina; Reis, Izabela; Magalhães, Catarina; Bordalo, Adriano A.; Almeida, C. Marisa R.. "Response of a salt marsh microbial community to metal contamination". Estuarine, Coastal and Shelf Science 130 (2013): 81-88. http://dx.doi.org/10.1016/j.ecss.2013.01.016. 10.1016/j.ecss.2013.01.016 Teixeira, Catarina; Magalhães, Catarina; Joye, Samantha B.; Bordalo, Adriano A.. "The role of salinity in shaping dissolved inorganic nitrogen and N2O dynamics in estuarine sediment–water interface". Marine Pollution Bulletin 66 1-2 (2013): 225-229. http://dx.doi.org/10.1016/j.marpolbul.2012.11.004. 10.1016/j.marpolbul.2012.11.004 Magalhães, C.; Salgado, P.; Kiene, R. P.; Bordalo, A. A.. "Influence of salinity on dimethyl sulfide and methanethiol formation in estuarine sediments and its side effect on nitrous oxide emissions". Biogeochemistry 110 1-3 (2012): 75-86. http://dx.doi.org/10.1007/s10533-011-9690-z. 10.1007/s10533-011-9690-z Magalhães, Catarina; Stevens, Mark I.; Cary, S. Craig; Ball, Becky A.; Storey, Bryan C.; Wall, Diana H.; Türk, Roman; Ruprecht, Ulrike. "At Limits of Life: Multidisciplinary Insights Reveal Environmental Constraints on Biotic Diversity in Continental Antarctica". PLoS ONE 7 9 (2012): e44578. http://dx.doi.org/10.1371/journal.pone.0044578. 10.1371/journal.pone.0044578 Teixeira, C; Magalhães, C; Joye, SB; Bordalo, AA. "Potential rates and environmental controls of anaerobic ammonium oxidation in estuarine sediments". Aquatic Microbial Ecology 66 1 (2012): 23-32. http://dx.doi.org/10.3354/ame01548. 10.3354/ame01548 Machado, Ana; Magalhães, Catarina; Mucha, Ana P.; Almeida, C.Marisa R.; Bordalo, Adriano A.. "Microbial communities within saltmarsh sediments: Composition, abundance and pollution constraints". Estuarine, Coastal and Shelf Science 99 (2012): 145-152. http://dx.doi.org/10.1016/j.ecss.2011.12.028. 10.1016/j.ecss.2011.12.028 Magalhães, C.; Kiene, R. P.; Buchan, A.; Machado, A.; Teixeira, C.; Wiebe, W. J.; Bordalo, A. A.. "A novel inhibitory interaction between dimethylsulfoniopropionate (DMSP) and the denitrification pathway". Biogeochemistry 107 1-3 (2012): 393-408. http://dx.doi.org/10.1007/s10533-010-9560-0. 10.1007/s10533-010-9560-0 Magalhães, C.; Kiene, R. P.; Buchan, A.; Machado, A.; Wiebe, W. J.; Bordalo, A. A.. "Methanethiol accumulation exacerbates release of N2O during denitrification in estuarine sediments and bacterial cultures". Environmental Microbiology Reports 3 3 (2011): 308-314. http://dx.doi.org/10.1111/j.1758-2229.2010.00226.x. 10.1111/j.1758-2229.2010.00226.x Magalhães, Catarina M.; Machado, Ana; Matos, Patrícia; Bordalo, Adriano A.. "Impact of copper on the diversity, abundance and transcription of nitrite and nitrous oxide reductase genes in an urban European estuary". FEMS Microbiology Ecology 77 2 (2011): 274-284. http://dx.doi.org/10.1111/j.1574-6941.2011.01107.x. 10.1111/j.1574-6941.2011.01107.x Mucha, Ana P.; Almeida, C. Marisa R.; Magalhães, Catarina M.; Vasconcelos, M. Teresa S.D.; Bordalo, Adriano A.. "Salt marsh plant–microorganism interaction in the presence of mixed contamination". International Biodeterioration & Biodegradation 65 2 (2011): 326-333. http://dx.doi.org/10.1016/j.ibiod.2010.12.005. 10.1016/j.ibiod.2010.12.005 Teixeira, Catarina; Magalhães, Catarina; Boaventura, Rui A.R.; Bordalo, Adriano A.. "Potential rates and environmental controls of denitrification and nitrous oxide production in a temperate urbanized estuary". Marine Environmental Research 70 5 (2010): 336-342. http://dx.doi.org/10.1016/j.marenvres.2010.07.001. 10.1016/j.marenvres.2010.07.001 Magalhães, CM; Machado, A; Bordalo, AA. "Temporal variability in the abundance of ammonia- oxidizing bacteria vs. archaea in sandy sediments of the Douro River estuary, Portugal". Aquatic Microbial Ecology 56 (2009): 13-23. http://dx.doi.org/10.3354/ame01313. 10.3354/ame01313 Magalhaes, C. "Dissolved organic carbon and nitrogen dynamics in the Douro River estuary, Portugal". Ciencias Marinas 34 3 (2008): 271-282. http://dx.doi.org/10.7773/cm.v34i3.1393. 10.7773/cm.v34i3.1393 Magalhães, C.; Bano, N.; Wiebe, W. J.; Bordalo, A. A.; Hollibaugh, J. T.. "Dynamics of Nitrous Oxide Reductase Genes (nosZ) in Intertidal Rocky Biofilms and Sediments of the Douro River Estuary (Portugal), and their Relation to N-biogeochemistry". Microbial Ecology 55 2 (2008): 259-269. http://dx.doi.org/10.1007/s00248-007-9273-7. 10.1007/s00248-007-9273-7 Magalhães, Catarina; Costa, Joana; Teixeira, Catarina; Bordalo, Adriano A.. "Impact of trace metals on denitrification in estuarine sediments of the Douro River estuary, Portugal". Marine Chemistry 107 3 (2007): 332-341. http://dx.doi.org/10.1016/j.marchem.2007.02.005. 10.1016/j.marchem.2007.02.005 Magalhães, C.; Bano, N.; Wiebe, W.J.; Hollibaugh, J.T.; Bordalo, A.A.. "Composition and activity of beta-Proteobacteria ammonia-oxidizing communities associated with intertidal rocky biofilms and sediments of the Douro River estuary, Portugal". Journal of Applied Microbiology 103 4 (2007): 1239-1250. http://dx.doi.org/10.1111/j.1365-2672.2007.03390.x. 10.1111/j.1365-2672.2007.03390.x Magalhäes, Catarina M.; Wiebe, William J.; Joye, Samantha B.; Bordalo, Adriano A.. "Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro River estuary (Portugal)". Estuaries 28 4 (2005): 592-607. http://dx.doi.org/10.1007/bf02696070. 10.1007/bf02696070 Magalhães, Catarina M.; Joye, Samantha B.; Moreira, Rosa M.; Wiebe, William J.; Bordalo, Adriano A.. "Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal". Water Research 39 9 (2005): 1783-1794. http://dx.doi.org/10.1016/j.watres.2005.03.008. 10.1016/j.watres.2005.03.008 Magalhães, CM; Bordalo, AA; Wiebe, WJ. "Intertidal biofilms on rocky substratum can play a major role in estuarine carbon and nutrient dynamics". Marine Ecology Progress Series 258 (2003): 275-281. http://dx.doi.org/10.3354/meps258275. 10.3354/meps258275 Magalhães, CM; Bordalo, AA; Wiebe, WJ. "Temporal and spatial patterns of intertidal sediment-water nutrient and oxygen fluxes in the Douro River estuary, Portugal". Marine Ecology Progress Series 233 (2002): 55-71. http://dx.doi.org/10.3354/meps233055. 10.3354/meps233055
Capítulo de livro	Rego, Adriana; Maria de Fátima Carvalho; Leão, Pedro N.; Magalhães, Catarina. "Polar Actinobacteria: a source of biosynthetic diversity in New Dimensional Research on Actinomycetes.". Springer Nature Book, 2022. Rego, Adriana; de Fátima Carvalho, Maria; Leão, Pedro; Magalhães, Catarina. "Polar Actinobacteria: A Source of Biosynthetic Diversity". In Natural Products from Actinomycetes, 71-89. Springer Singapore, 2022. 10.1007/978-981-16-6132-7_3 Pinto, José; Costa, Maria; Lima, Keila; Dias, Paulo; Pereira, João; Ribeiro, Manuel; Campos, Renato; et al. "To Boldly Dive Where No One Has Gone Before: Experiments in Coordinated Robotic Ocean Exploration". In Springer Proceedings in Advanced Robotics, 472-487. Springer International Publishing, 2021. 10.1007/978-3-030-71151-1_42 "Magalhães C, Martins A, dos Santos A. New Approaches to Study Jellyfish: from Autonomous Apparatus to Citizen Science. Teodosio MA, Barbosa AMB (Eds.), Chapter 10, 25pp. ISBN: 9781138496453 (print), ISBN: 9781351021821 (eBook).". In Zooplankton Ecology. Boca Raton, Estados Unidos: CRC Press, 2020. Publicado "Ribeiro H, Santos JP, Sousa ASS, Salgado P, Tomasino MP, Baptista MS, Magalhães C. Aerobic ammonia-oxidising prokaryotes: A perception of their niche segregation across estuarine salinity gradients. Global Implications of the Nitrogen Cycle. De Sousa T. (Ed), ISBN (10): 1527555135, ISBN". 100-135. Reino Unido: Cambridge Scholars Publishing, UK, 2020.
Livro	Magalhães, Catarina; Alfredo martins; Antonina dos Santos. New Approaches to Study Jellyfish : From Autonomous Apparatus to Citizen Science. Boca Raton, Estados Unidos: CRC Press - Taylor & Francis Group. 2020. Publicado
Poster em conferência	Pascoal, Francisco; Costa, Rodrigo; Branco, Paula; Torgo, Luis; Assmy, Philipp; Magalhães, Catarina. "Construction of a long-term dataset of prokaryotic diversity from two transects of the MOSJ program". Trabalho apresentado em XV Conferência Portuguesa de Ciências Polares, 2023. Pascoal, Francisco; Branco, Paula; Costa, Rodrigo; Magalhães, Catarina. "Unsupervised learning based definition of the microbial rare biosphere". Trabalho apresentado em BTC - Blue Think Conference, 2023. Maria L. Bôto; Dhwani K. Desai; LaRoche, Julie; Magalhães, Catarina; Ana P. Mucha. "Diversity of the Functional Machinery of Native Microorganisms for Oil Spills Bioremediation". Trabalho apresentado em FEMS2023 \| Congress of European Microbiologists, 2023. Rafaela Perdigão; Ana Sofia Tavares; Maria F. Carvalho; Magalhães, Catarina; Ramos, Sandra; C. Marisa R. Almeida; Ana Paula Mucha. Autor correspondente: Rafaela Perdigão. "Microbial colonization of fishing nets". Trabalho apresentado em Ciência 2023: Ciência e Oceano para além do horizonte, 2023. Maria L. Bôto; Dhwani K. Desai; LaRoche, Julie; Magalhães, Catarina; Ana P. Mucha. "Metagenomic Analysis of Seawater Microbial Communites for Oil Spills Bioremediaton". Trabalho apresentado em Ciência2023: Ciência e Oceano para além do horizonte, 2023. Pascoal, Francisco; Costa, Rodrigo; Torgo, Luis; Duarte, Pedro; Assmy, Philipp; Magalhães, Catarina. "Full-length 16S rRNA gene sequencing combined with GTDB database improved the description of microbial communities from marine polar environments". Trabalho apresentado em BAGECO - Bacterial Genomics and Ecology, 2023. Maria L. Bôto; Dhwani K. Desai; LaRoche, Julie; Magalhães, Catarina; Ana P. Mucha. "Metagenomic Analysis of Native Microbial Communities for Oil Spills Bioremediation". Trabalho apresentado em 3rd International Meeting on New Strategies in Bioremediation/Restoration Processes (BioRemid2023), 2023. Rafaela Perdigão; Maria Paola Tomasino; Magalhães, Catarina; Ramos, Sandra; Maria F. Carvalho; C. Marisa R. Almeida; Ana Paula Mucha. Autor correspondente: Rafaela Perdigão. "Bioremediation of a real oil spill accident ¿ response of the microbial community and potential for bioaugmentation application". Trabalho apresentado em 3rd International Meeting on New Strategies in Bioremediation/Restoration Processes (BioRemid23), 2023. Maria L. Bôto; Rafaela P. Mendes; Diogo A. M. Alexandrino; Fernandes, Joana P.; Maria Paola Tomasino; Ramos, Sandra; Maria F. Carvalho; et al. "Native Hydrocarbon Degrading Microorganisms Collected Along the NW Coast of Portugal". Trabalho apresentado em Final Workshop OCEAN3R: Reduce pressures, restore and regenerate the NW-Portuguese ocean and waters, 2023. Beatriz Santos Silva; Alves, Filipe; Ana Dinis; Rita Borges Ferreira; Ana Mafalda correia; Raúl Valente; Ágatha Gil; et al. "Blow microbiota of free-ranging short-finned pilot whales: comparison of two 16S rRNA primers for studies of blow prokaryotic communities". Trabalho apresentado em 34th Conference of the European Cetacean Society, 2023. Rafaela Perdigão; Ana Sofia Tavares; Maria F. Carvalho; Magalhães, Catarina; Ramos, Sandra; Almeida, C. Marisa R; Ana P. Mucha. Autor correspondente: Rafaela Perdigão. "Unveiling the microbial communities associated with plastic fishing nets: an in situ experiment in seawater". Trabalho apresentado em MicroSummit 2022, 2022. Rego, Adriana; Øvreås, Lise; Magalhães, Catarina; Leão, Pedro N.. "CYANOBACTERIA BIOFILMS FROM SVALBARD IN THE ARCTIC - ARTICOMICS PROJECT". Trabalho apresentado em XIV CONFERÊNCIA PORTUGUESA DE CIÊNCIAS POLARES, 2022. Rafaela Perdigão; Ana Sofia Tavares; Maria F. Carvalho; Magalhães, Catarina; Ramos, Sandra; C. Marisa R. Almeida; Ana P. Mucha. Autor correspondente: Rafaela Perdigão. "Microbial communities in fishing nets: can they harbor biotechnological potential?". Trabalho apresentado em Blue Think Conference: Share Science, Spread Knowledge 2022, 2022. Beatriz Santos Silva; Alves, Filipe; Ana Dinis; Rita Ferreira; Correia, Mafalda; Raúl Valente; Ágatha Gil; et al. "Investigation of respiratory prokaryotic communities of free-ranging short-finned pilot whales using non-invasive sampling". Trabalho apresentado em Blue Think Conference 22', 2022. Semedo, Miguel; Lopes, Eva; Baptista, Mafalda S.; Oller-Ruiz, A; Gilabert, Javier; Tomasino, Maria Paola; Magalhães, Catarina. "Unveiling the planktonic nitrifying communities of the remote North Pacific through metabarcoding and metagenomics". Trabalho apresentado em ISME18 - International Symposium on Microbial Ecology, 2022. Maria Tomasino; Beatriz Santos Silva; Alves, Filipe; Ana Dinis; Rita Ferreira; Correia, Mafalda; Raúl Valente; et al. "Dive into the blow microbiome of free-ranging short-finned pilot whales: protocol optimization and preliminary results". Trabalho apresentado em 24th Biennial Conference on the Biology of Marine Mammals, 2022. Rafaela Perdigão; Ana Sofia Tavares; Magalhães, Catarina; M. Fátima Carvalho; Ramos, Sandra; Almeida, Marisa; Ana P. Mucha. Autor correspondente: Rafaela Perdigão. "Uncovering the microbial communities associated with plastic fishing nets". Trabalho apresentado em 2nd FEMS Conference on Microbiology, 2022, 2022. Ana Paula Mucha; Rafaela Perdigão; Maria Paola Tomasino; Bôto, Maria; Fernandes, Joana P.; Diogo A. M. Alexandrino; Ramos, Sandra; et al. Autor correspondente: Ana Paula Mucha. "Project BIOREM: Bioremediation of hydrocarbon pollutants by autochthonous microorganisms in aquatic environment". Trabalho apresentado em Microbiotec 21, 2021. Rafaela Perdigão; Bárbara Correia; Van der Gracht, Henry; Ana Sofia Tavares; Sabrina M. Rodrigues; Magalhães, Catarina; Maria Fátima Carvalho; et al. "Environmental harmfulness of lost fishing gear in the NW Portuguese coast : the NetTag project". Trabalho apresentado em ECSA 58 & EMECS 13 - Estuaries and Coastal Seas in the Anthropocene, 2021. Pascoal, Francisco; Costa, Rodrigo; Magalhães, Catarina. "The prokaryotic rare biosphere is sensible to environmental heterogeinity in the Arctic ocean". Trabalho apresentado em Portuguese Polar Sciences Conference, 2020. Rego, Adriana; Sousa, Antonio G. G.; Leão, Pedro N.; Magalhães, Catarina. "Biosynthetic diversity of Arctic ocean microbiomes". Trabalho apresentado em Blue Think Conference - CIIMAR, Univeristy of Porto, 2020. Bôto, Maria; Rafaela P. Mendes; Diogo A. M. Alexandrino; Fernandes, Joana P.; Cláudia Cova; Maria Paola Tomasino; Ramos, Sandra; et al. "Comparison of culture-dependent and independent approaches for the bioremediation of oil spills (Co-author)". Trabalho apresentado em BTC2020 - Blue Think Conference, 2020. Bôto, Maria; Rafaela P. Mendes; Diogo A. M. Alexandrino; Fernandes, Joana P.; Cláudia Cova; Maria Paola Tomasino; Ramos, Sandra; et al. "Comparison of culture-dependent and independent approaches for the bioremediation of oil spills". 2020. Van der Gracht, Henry; Mendes, Rafaela P.; Magalhães, Catarina; Carvalho, Maria F.; Ana Paula Mucha; Ramos, Sandra; Almeida, C. Marisa R.. "Potential of lost fishing gear for adsorption of Polycyclic Aromatic Hydrocarbons (PAHs)". Trabalho apresentado em 13.º Encontro de Jovens Investigadores da U.Porto, 2020. Tavares, Ana Sofia; Mendes, Rafaela P.; Magalhães, Catarina; Ramos, Sandra; Carvalho, Maria F.; Almeida, C. Marisa R.; Ana Paula Mucha. "Characterization of microbial communities associated with lost fishing nets". Trabalho apresentado em 13.º Encontro de Jovens Investigadores da U.Porto, 2020. Correia, Bárbara R.; Mendes, Rafaela P.; Magalhães, Catarina; Carvalho, Maria F.; Ana Paula Mucha; Ramos, Sandra; Almeida, C. Marisa R.. "Potential of lost fishing gears for adsorption of inorganic compounds: Hotspots characterization". Trabalho apresentado em 13.º Encontro de Jovens Investigadores da U.Porto, 2020. Maria L. Bôto; Magalhães, Catarina; Rafaela Perdigão; Diogo A. M. Alexandrino; Fernandes, Joana P.; Ana M. Bernabeu; Ramos, Sandra; et al. "Georeferenced library of native microbial consortia: a starting point to bioremediate oil spills [co-author]". Trabalho apresentado em 2nd edition of the International Meeting on New Strategies in Bioremediation Processes (BioRemid2019), 2019. Bôto, Maria; Magalhães, Catarina; Mendes, Rafaela P.; Diogo A. M. Alexandrino; Fernandes, Joana P; Bernabeu, Ana; Ramos, Sandra; et al. "Georeferenced library of native microbial consortia: a starting point to bioremediate oil spills". Trabalho apresentado em 2nd edition of the International Meeting on New Strategies in Bioremediation Processes (BioRemid2019), 2019. Pascoal, Francisco; Magalhães, Catarina; Costa, Rodrigo. "Thinking microbial rarity". Trabalho apresentado em Halifax Mini Symposium on marine microbiology, 2019. Bôto, Maria; Magalhães, Catarina; Mendes, Rafaela P.; Diogo A. M. Alexandrino; Fernandes, Joana P; Santos, Filipa; Ramos, Sandra; et al. "Georeferenced library of native microbial consortia: a tool for bioremediation of oil spills". Trabalho apresentado em 31st New European Society for Comparative Physiology and Biochemistry Congress, Porto, Portugal, 2018. Mendes, Rafaela P.; Ramos, Sandra; Diogo A. M. Alexandrino; Bôto, Maria; Ribeiro, Hugo; Magalhães, Catarina; Carvalho, Maria F.; Almeida, C. Marisa R.; Mucha, Ana P.. "An innovative approach to help clean oil spills: native microbial consortia with bioremediation capacity". Trabalho apresentado em ECSA 57: Changing estuaries, coasts and shelf systems - Diverse threats and opportunities, Perth, Australia, 2018. Magalhães, Catarina. "Bartilotti C, Santos A, Marques R, Silva A, Churro C, C Sónia, Ribeiro H, Mucha AP, Carvalho F, Almeida CMR, Azevedo I, Ramos S, Borges T, Leandro S, Dias A, Silva E, Ferreira H, Dias I, Almeida JM, Torgo L, Dias N, Jorge P, Martins A. Presenting the MarinEye project –Development and validation of a prototype for multitrophic oceanic monitoring.". Trabalho apresentado em ASC 2016- ICES Anual Science Meeting, 2016. Magalhães, Catarina. "Ribeiro H, Sousa T, Santos J, Teixeira C, Salgado P, Mucha AP, Almeida CMR, Magalhães C. Naphthalene and fluoranthene degradation under nitrate reduction conditions - key shifts on indigenous estuarine microbial consortium.". Trabalho apresentado em ECSA 56, 2016. Magalhães, Catarina. "Ribeiro H, Almeida CMR, Oliveira T, Salgado P, Mucha AP, Magalhães C. Effects of Copper on microbial denitrification and N2O production in salt marsh sediments.". Trabalho apresentado em ECSA56, 2016. Magalhães, Catarina. "Duarte B, Canning-Clode J, Magalhães C, Torgo T, Todorova NH, Rangelov M, Kandil M, Oulas A, Polymenakou PN, Goodwin KD, Kahlke T, Costa R, Malfatti F, Marques JC, Caçador I. Towards the development of a Marine Health Index: a first approach provided by the Ocean Sampling Day (OSD) campaigns.". Trabalho apresentado em ECSA 56, 2016. Magalhães, Catarina. "Santos J, Magalhães C, Ribeiro H, Padeiro A, Canário J. Shifts on bacterial community diversity in Antarctica Fildes Peninsula soils with different levels of metal concentrations.". Trabalho apresentado em ECSA 56, 2016. Magalhães, Catarina. "Ribeiro H, Magalhães C, Mucha AP, Carvalho MF, Almeida CMR, Azevedo I, et al. Development and validation of an autonomous filtration system for integrated marine monitoring". Trabalho apresentado em ECSA 56, 2016. Magalhães, Catarina. "Monteiro M, Séneca J, Torgo L, Baptista M, Lee C, Cary SC, Magalhães C. Testing how changes in environmental variables promote shifts in Nitrogen pathways and prokaryotic communities in soils from extreme Antarctica Dry Valleys". Trabalho apresentado em 7ª Conferência Portuguesa de Ciências Polares, 2015. Magalhães, Catarina. "Santos J, Magalhaes C , Ribeiro H, Padeiro A , Canario J. Shifts on bacterial community structure in Antarctica Fildes Peninsula soils with different levels of metal concentrations.". Trabalho apresentado em BioMicroWord 2015 Conference, 2015. Magalhães, Catarina. "Clara FR, Monteiro M, Magalhães C, Séneca J, Mucha AP, Hilário A. Diversity of bacterial communities on mammal carcasses in the Setubal canyon (NE Atlantic).". Trabalho apresentado em Deep Sea Biology Symposium, 2015. Martins, Teresa; Ramos, Vitor; Monteiro, M; Brito, Ângela; Tamagnini, Paula; Vasconcelos, Vitor; Leão, Pedro; Magalhães, Catarina. "Morphologic and molecular characterization of an endolithic microalga from McMurdo Dry Valleys (East Antarctica) and some insights into possible microbial and photosynthetic eukaryote interactions". Trabalho apresentado em XX Simpósio de Botânica Criptogâmica; Porto, Portugal, 2015. Magalhães, Catarina. "Martins T, Ramos V, Monteiro M, Brito, Tamagnini P, Vasconcelos, Leão and Magalhães C. Morphologic and molecular characterization of a endolithic microalgae from McMurdo Dry Valleys (East Antarctica) and some insights into possible microbial and photosynthetic eukaryote interactions.". Trabalho apresentado em XX Simpósio de Botânica Criptogâmica, 2015. Magalhães, Catarina. "Rego A, Martins T, Costa MS, Ramos V, Vasconcelos V, Magalhães C, Leão P. Cyanobacteria from the McMurdo Dry Valleys (Victoria Land, East Antarctica): Their Biodiversity and Chemodiversity.". Trabalho apresentado em IJUP, 2015. Magalhães, Catarina. "Rego A, Martins T, Costa MS, Ramos V, Vasconcelos V, Magalhães C, Leão P. Cyanobacteria from the McMurdo Dry Valleys (Victoria Land, East Antarctica) : Their Biodiversity and Chemodiversity". Trabalho apresentado em III AEICBAS Biomedical Congress – March 20th - 22nd, Porto, 2015. Magalhães, Catarina. "Ribeiro H, Séneca J, Monteiro M, Charles L, Cary SC, Magalhães C. Terrestrial microbial abundance and diversity across a transect, focus in water availability in the Antarctic Dry Valleys". Trabalho apresentado em 6ª Conferência Portuguesa de Ciências Polares, 2014. Magalhães, Catarina. "Rego A, Costa MS, Ramos V, Vasconcelos V, Magalhães C, Leão P. Cyanobacteria from the McMurdo Dry Valleys (Victoria Land, East Antarctica) : Their Biodiversity and Chemodiversity"". Trabalho apresentado em 6ª Conferência Polar Portuguesa, 2014. Magalhães, Catarina. "Salgado P, Visnevschi-Necrasov T, Kiene RP, Azevedo I, Rocha ACS, Almeida CMR, Magalhães C. Determination of 3-Mercaptopropionic Acid by HPLC: A Sensitive Method for Environmental Applications.". Trabalho apresentado em 6th DMS(P) Symposium, 2014. Magalhães, Catarina. "Mucha AP, Ferreira C, Ferreira J, Martins G, Magalhães C, Ramos S. Responses of ecosystem services to anthropogenic driven changes in an estuarine ecosystem.". Trabalho apresentado em ECSA54, 2014. Magalhães, Catarina. "Magalhães C, Azevedo I, Almeida CMR, Salgado P, Teixeira C, Joye S, Mucha AP. Antagonic effect of petroleum in estuarine Denitrification and Anammox processes.". Trabalho apresentado em ECSA 54, 2014. Magalhães, Catarina. "Monteiro M, Santoro AE, Gomes N. CM, Magalhães C. 2013. Shifts in sediment prokaryotic community". Trabalho apresentado em 13th SAME, Aquatic Microbial Ecology, 2013. Magalhães, Catarina. "Salgado P, Kiene R, Magalhães C. Salinity as a key regulator of DMSP catabolism pathways in estuarine sediments and in a Ruegeria pomeroyi pure culture.". Trabalho apresentado em 13th SAME, Aquatic Microbial Ecology, 2013. Magalhães, Catarina. "Séneca J, Monteiro M, Ribeiro H, Lee C, Magalhães C, Cary SC. NITROEXTREM: 2013 Antarctic Field Campaign to the Dry Valleys.". Trabalho apresentado em 5ª Conferência Portuguesa de Ciências Polares, 2012. Magalhães, Catarina. "Mucha AP, Teixeira C, Magalhães C, Bordalo AA, Almeida CMR. Response of salt marsh microbial community to metal contamination.". Trabalho apresentado em ECSA, 2012. Magalhães, Catarina. "Magalhães C, Bordalo AA, Machado A, Barbier B, Lee CK, Cary CS. The ecological dichotomy of ammonia oxidizing archaea and bacteria in the hyper-arid soils of the Antarctic Dry Valleys.". Trabalho apresentado em ISME 14. The Power of the Small, 2012. Magalhães, Catarina. "Magalhães C, Kiene RP, Buchan A, Hollibaugh JT, Machado A, Teixeira C, Wiebe WJ, Bordalo AA. DMSP and/or its degradation products interfer with N2O reduction step of denitrification.". Trabalho apresentado em Gordon Research Conference. Marine Microbes: Bridging the Gaps from Genomes to Biomes., 2012.
Pré-impressão	Pavloudi, Christina; Santi, Ioulia; Azua, Iñigo; Baña, Zuriñe; Bastianini, Mauro; Belser, Caroline; Bilbao, Jone; et al. "First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples". 2025. https://doi.org/10.3897/arphapreprints.e146366. 10.3897/arphapreprints.e146366
Resumo em conferência	Beatriz Malcata Martins, Holger Hintelmann, Martin Pilote, Rute Cesário, Rodrigo Dias, Joana Costa, Catarina Magalhães,. "Assessing mercury methylation and methylmercury demethylation in thermokarst lakes in a sporadic permafrost region, Canadian Subarctic". Trabalho apresentado em Goldschmidt 2023 Conference, Lyon, 2023. Aceite para publicação Afonso, Luís; Costa, Joana; Correia, Ana M.; Tomasino, Maria P.; Valente, Raul; Gil, A.; Oliveira-Rodrigues, Cláudia; et al. Autor correspondente: Afonso, Luís. "Environmental DNA as a cetacean monitoring tool in the Northern Coast of Continental Portugal". Trabalho apresentado em Young Investigation Conference of University of Porto (IJUP), Porto, 2023. Publicado Silva, Beatriz; Alves, Filipe; Dinis, Ana; Ferreira, Rita; Correia, Ana M.; Valente, Raúl; Gil, Ágatha; Castro, Filipe;. "Blow microbiota of free-ranging short-finned pilot whales: comparison of two 16S rRNA primers for studies of blow prokaryotic communities". Trabalho apresentado em European Cetacean Society Conference (2023), GROVE, 2023. Maria L. Bôto; Rafaela P. Mendes; Diogo A. M. Alexandrino; Fernandes, Joana P.; Maria Paola Tomasino; Bernabeu, Ana M.; Ramos, Sandra; et al. "Hydrocarbon Degrading Microorganisms in the NW Coast of the Iberian Peninsula: A Starting Point for Oil Spill Bioremediation". Trabalho apresentado em International Oil Spill Science Conference, Halifax, 2022. Maria L. Bôto; Rafaela P. Mendes; Diogo A. M. Alexandrino; Fernandes, Joana P.; Maria Paola Tomasino; Ramos, Sandra; Carvalho, M. Fátima; et al. "Marine Microorganisms for Bioremediation of Oil Spills: Culture-dependent and Independent Approaches". Trabalho apresentado em FEMS Conference on Microbiology, Belgrade, 2022. "Catarina Magalhães, Joana Costa, Mafalda Baptista, Maria Paola Tomasino, Miguel Semedo, Philipp Assmy, Pedro Duarte.Links between taxonomy and functional traits in Arctic microbial communities across the Svalbard Shelf.". Trabalho apresentado em Ocean Sciences Meeting 2022 - Online, 2022. Publicado "Rafaela Perdigão, Maria Paola Tomasino, Cristina Marisa Almeida, Catarina Magalhães, Sandra Ramos, Maria de Fátima Carvalho, Ana Paula Mucha. Lyophilized bacterial agents for bioremediation of hydrocarbons in seawater: tackling a port oil spill accident.". Trabalho apresentado em Microbiotec 2021, Lisbon, 2021. "Maria L. Bôto, Rafaela Perdigão, Diogo A. M. Alexandrino, Joana P. Fernandes, Maria Paola Tomasino, Sandra Ramos, Maria F. Carvalho, C. Marisa R. Almeida, Julie LaRoche, Catarina Magalhães, Ana P.Mucha. A Georeferenced Library of Native Microorganisms for Bioremediation of Oil Spills". Trabalho apresentado em Microbiotec 2021, Lisbon, 2021. Publicado "Ana P. Mucha, Maria Paola Tomasino, Rafaela Mendes, Maria Luis Bôto, Joana P. Fernandes, Diogo Alexandrino, Sandra Ramos, Maria F. Carvalho, Catarina Magalhães, André Dias, C. Marisa R.Almeida Project BIOREM: Bioremediation of hydrocarbon pollutants by autochthonous microorganisms in aquatic environment.". Trabalho apresentado em Microbiotec 2021 - Congress of Microbiology and Biotechnology, Lisbon, 2021. Publicado "Miguel Semedo, Ana Paula Mucha, Diana Bastos Almeida, Joana P. Fernandes, Catarina Magalhães. The microbiome(s) of Senegalese sole fed with different diets.". Trabalho apresentado em Microbiotec 2021 - Congress of Microbiology and Biotechnology, Lisbon, 2021. Publicado "D. Almeida, Z. Sousa; M.T. Borges, C. Magalhães, E. Silva, I. Blanquet, A. P. Mucha A study of the dynamics of the prokaryotic community in a recirculating aquaculture system (RAS) from a sole solea senegalensis hatchery.". Trabalho apresentado em Aquaculture Europe 2021, Funchal, 2021. "Joana P. Fernandes, Diana Bastos Almeida, Catarina Magalhães, Isidro Blanquet, Ana Paula Mucha. Biofilm modulation of recirculating aquaculture systems to improve water quality and fish welfare". Trabalho apresentado em Aquaculture Europe 2021, Funchal, 2021. Publicado "Rafaela P. Mendes, Bárbara Correia, Henry Van der Gracht, Ana Sofia Tavares, Sabrina Rodrigues, Sofia Dias, Luca Rivoira, Catarina Magalhães, Maria F. Carvalho, Ana P. Mucha, Sandra Ramos, C.Marisa R. Almeida Environmental harmfulness of lost fishing gears in the NW Portuguese coast – theNetTag project". Trabalho apresentado em ECSA 58 - EMECS 13 Estuaries and coastal seas in the Anthropocene, Hull, 2021. "Adriana Rego, Nádia Eusébio, Paul M. D’Agostino, Tobias A. M. Gulder, Catarina Magalhães, PedroN. Leão Biosynthetic diversity of a subaerial cyanobacteria biofilm.". Trabalho apresentado em XII European Conference on MarineNatural Products (ECMNP), Galway, 2021. Publicado "Alexandrino DAM, Mucha AP, Semedo M, Cao W, Azevedo J, Magalhães C, Hia Z, Osório H, CamposA, Almeida CMR, Carvalho MF. De novo elucidation of the bacterial catabolic pathway of the fluorinated pesticide epoxiconazole.". Trabalho apresentado em 1st International Congress of Biotechnology and Bioengineering, Arequipa, 2021. Publicado "D. Almeida, Z. Sousa; M.T. Borges, C. Magalhães, E. Silva, I. Blanquet, A. P. Mucha An insight of the prokaryotic community of a recirculating aquaculture system (RAS) of a solea senegalensis hatchery and its interactions with physical-chemical parameters.". Trabalho apresentado em Animal Health Symposium, Porto, 2021. "Marta Sousa, Maria Paola Tomasino, Catarina Magalhães. A comparative approach between metabarcoding and microscopy analysis to study the Arctic Ocean Eukaryotic Microbiome". Trabalho apresentado em Arctic Science Summit Week, Lisbon, 2021. "Catarina Magalhães, António Sousa, Maria Paola Tomasino, Philipp Assmy, Pedro Duarte. Links between Arctic microbial taxonomy and nitrogen functional traits Across the Svalbard Shelf". Trabalho apresentado em Arctic Science Summit Week, Lisbon, 2021. Aceite para publicação "Francisco Pascoal, Rodrigo Costa and Catarina Magalhães. The types of prokaryotic rarity in the Arctic ocean.". Trabalho apresentado em Arctic Science Summit Week, 2021. "Miguel Semedo, Maria Paola Tomasino, Maria F. Carvalho, Catarina Magalhães, Ana Paula Mucha. Wastewater monitoring of SARS-CoV-2 RNA in Porto, Portugal: temporal variations during the COVID-19 pandemic.". Trabalho apresentado em Microbiotec 2021, 2021. Publicado "Adriana Rego, Catarina Magalhães, Pedro N. Leão. “Bioprospeccion enzimárica de alto flujo en metagenomas". Trabalho apresentado em Bioprospection of marine and lake metagenomes Simposio, Santo Domingo, 2021. Publicado "Baptista MS, Magalhães C Lee C, Cary C Biogeography of microbial communities around a penguin colony shows how biotically-mediated nutrient transfers shape Antarctica terrestrial ecosystems.". Trabalho apresentado em ISME Virtual Microbial Ecology Summit - online., 2020. Publicado "Rego A, Sousa, AGG, Le ~ao PN, Magalhães C. Biosynthetic diversity of Arctic Ocean microbiomes.". Trabalho apresentado em XIIPortuguese Polar Sciences Conference - online., 2020. Publicado "Baptista MS, Magalhães C, Monteiro M, Lee CK, Cary SC. The role of Antarctic near shore penguin colonies in assisting bacterial populations distribution.". Trabalho apresentado em XII Portuguese Conference on Polar Sciences - online, 2020. Publicado "Sousa M, Tomasino M, Magalhaes C. Metabarcoding vs Microscope Approaches to Study Arctic Eukaryotic Microbiome.". Trabalho apresentado em European University Alliance for Global Health, EUGLOH 2020 - Online., 2020. Publicado "Sousa M, Tomasino M, Magalhães C . Biogeographic patterns, diversity and distribution of Arctic’s protists community.". Trabalho apresentado em Blue Think Conference, Porto, 2020. Publicado "Rego A, Sousa AGG, Le ~ao PN, Magalhães C. Biosynthetic diversity of Arctic ocean microbiomes.". Trabalho apresentado em Blue Think Conference - Online., Porto, 2020. Publicado Almeida, C. Marisa R.; Magalhães, Catarina; sandra ramos. "The NetTag consortium. New approaches and technologies to prevent marine litter for fisheries". Trabalho apresentado em 42nd CIESM Congress, Cascais, 2019. Publicado Magalhães, Catarina. "Costa J, Sousa AGG, Carneiro AC, Almeida M, Magalhães C, Baptista MS. Evaluation of the denitrification efficiency of estuarine sediments exposed to Cu nanoparticles". Trabalho apresentado em 24th European Nitrogen CycleMeeting, Lisboa, 2019. Publicado Magalhães, Catarina. "Sousa AGG, Costa J, Carneiro AC, Almeida M, Magalhães C, Baptista MS. Denitrifying microbial communities activity enhanced by Cu nanoparticles exposure in a temperate estuary". Trabalho apresentado em 16th Symposium of Aquatic Microbial Ecology (SAME), Potsdam, 2019. Publicado "Bôto ML, Magalhães C, Mendes R, Alexandrino D, Fernandes J, Ramos S, Carvalho MF, Almeida CMR, Mucha AP. Georeferenced library of native microbial consortia: a tool for bioremediation of oil spills.". Trabalho apresentado em 31st New European Society for Comparative Physiology and Biochemistry (ESCPB), Porto, 2019. Publicado Magalhães, Catarina. "Sousa AGG, Costa J, Carneiro AC, Almeida M, Magalhães C, Baptista MS. Impact of copper nanoparticles on denitrifying microbial communities from estuarine sediments". Trabalho apresentado em 8th Congress of European Microbiologists (FEMS), Glasgo, 2019. Publicado Magalhães, Catarina. "Rego A, Santos J, Sousa A, Fernandez-Guerra A, Leão PN, Magalhães C. Diversity of bacterial biosynthetic genes across Fildes Bay, King George Island.". Trabalho apresentado em 8th Polar & Alpine Microbiology 2019 Conference, Hamilton, 2019. Publicado Magalhães, Catarina. "Baptista M, Magalhães C, Lee CK, Cary SC. Nitrogen Point Source Tracking in Antarctica Terrestrial Environments: A case study of the Cape Adare Penguin Colony.". Trabalho apresentado em 8th Polar & Alpine Microbiology 2019 Conference, Hamilton, 2019. Publicado Magalhães, Catarina. "Magalhães C, Sousa A, Tomasino MP, Portugal B, Baptista M, Santos JP, Leite RB, Assmy P, Torgo T, Duarte P. Biogeography of Arctic microbial nitrogen-cycling traits in the Svalbard shelf.". Trabalho apresentado em 8th Polar & Alpine Microbiology 2019 Conference, Hamilton, 2019. Publicado Magalhães, Catarina. "Magalhães C, Sousa A, Tomasino MP, Portugal B, Baptista M, Santos JP, Leite RB, Assmy P, Torgo T, Duarte P. Biogeography of Arctic microbial nitrogen-cycling traits in the Svalbard shelf.". Trabalho apresentado em 8th Polar & Alpine Microbiology 2019 Conference, Hamilton, 2019. Publicado "Santos JP, Gomes A, Moura E, Afonso A, Magalhães C, Borges MT. Impact of changes in recirculation rate on Moving Bed Biofilm Reactor (MBBR) biofilm physiology and performance in a trout RAS cultivation system.". Trabalho apresentado em 3rd Aquaimprove – Aquaculture Research Workshop, Porto, 2018. Publicado "Costa M, Pinto J, Sousa Dias P, Pereira J, Lima K, Ribeiro M, Borges de Sousa J, Lukaczyk T, Mendes,R, Tomasino MP, Magalhães C and et. al. Field Report: Exploring Fronts with Multiple Robots.". Trabalho apresentado em IEEEOES AUV Conference, Porto, 2018. Publicado "Mendes RF, Ramos S, Alexandrino DAM, Bôto M, Fernandes JP, Santos F, Ribeiro H, Magalhães C,Carvalho MF, Almeida CMR and Mucha AP. An innovative approach to help clean oil spills: native microbial consortia with bioremediation capacity.". Trabalho apresentado em CSA 57: Changing estuaries, coasts and shelf systems- Diverse threats and opportunities., Perth, 2018. Publicado Magalhães, Catarina. "Santos JP, Ribeiro H, Sousa A, Padeiro A, Canário J, Magalhães C. Anthropogenic impact on soil prokaryotic communities of Fildes Peninsula.". Trabalho apresentado em POLAR2018, SCAR/IASC Open Science Conference, Davos, 2018. Publicado Magalhães, Catarina. "Sousa A, Tomasino MP, Duarte P, Fernández-Méndez M, Assmy P, Ribeiro H, Surkont J, Leite R, Leal JP, Torgo L, Magalhães C. 2018. The Arctic microbiome during the winter-spring transition: nitrogen-cycle genes.". Trabalho apresentado em POLAR2018, SCAR/IASC Open Science Conference, Davos, Davos, 2018. Publicado Magalhães, Catarina. "Magalhães C, Sousa A, Tomasino MP, Duarte P, Torgo L, Assmy P. Biogeography of Arctic microbiome along Svalbard Cross Shelf transects”". Trabalho apresentado em POLAR2018, SCAR/IASC Open Science Conference, Davos, 2018. Publicado Magalhães, Catarina. "Baptista M, Magalhães C, Monteiro M, Lee CK, Cary SC. Penguins as drivers of microbial diversity in maritime Antarctic soils.". Trabalho apresentado em POLAR2018, SCAR/IASC Open Science Conference, Davos, 2018. Publicado "Mendes RF, Alexandrino DAM, Bôto M, Fernandes JP, Santos F, Ribeiro H, Magalhães C, Ramos S,Carvalho, MF, Almeida CMR, Mucha AP. Oil spills bioremediation with native hydrocarbon-degrading bacteria: SpilLess project.". Trabalho apresentado em 7th European Bioremediation Conference (EBC-VII) and the 11th International Society for Environmental Biotechnology conference (ISEB 2018), Chania, Crete from June 25to June 28., Chania, Crete, 2018. Publicado Magalhães, Catarina. "Santos JP, Afonso A, Magalhães C, Borges MT. Impact of an increase in Recirculation Rate on the Ecophysiology of a Moving Bed Biofilm Reactor.". Trabalho apresentado em MicroBiotec 2017, Porto, 2017. Publicado Magalhães, Catarina. "Monteiro M, Séneca J, Torgo L, Baptista M, Lee CK, Cary SC, Magalhães C. The response of nitrifying communities to disturbance in the McMurdo Dry Valleys.". Trabalho apresentado em XII Scar Biology Symposium, Leuven, 2017. Publicado Magalhães, Catarina. "Rego A, Costa SRC, Ramos V, Vasconcelos V, Magalhães C, Leão P. Exploring Antarctic Microbiomes as Source of Bioactive Molecules.". Trabalho apresentado em XII Scar Biology Symposium, Leuven, 2017. Publicado Magalhães, Catarina. "Martins T, Ramos V, Castelo Branco R, Monteiro M, Brito A, Tamagnini P, Vasconcelos V, Leão P, Magalhães C. A new genus of endolithic microalga from McMurdo Dry Valleys (East Antarctica)". Trabalho apresentado em XII Scar Biology Symposium, Leuven, 2017. Publicado Magalhães, Catarina. "Magalhães C, Mucha AP, Carvalho F, Ribeiro H, Almeida CNR, Azevedo I, Ramos S, Borges T, Leandro S, Santos A, Silva A, Bartilotti C, Cotrim S, Marques R, Churro C, Dias A, Ferreira H, Dias I, Almeida JM, Torgo L, Oliveira M, Dias N, Jorge P, Martins A, Silva E. Development of an autonomous system for integrated marine monitoring". Trabalho apresentado em 41st CIESM Congress, Kiel, Germany, 12-16 September., Kiel, 2016. Publicado Magalhães, Catarina. "Ribeiro H, Mucha AP, Azevedo I, Salgado P, Teixeira C, Almeida CMR, Joye SB, Magalhães C. Antagonic interference of Crude Oil in Denitrification and Anammox, and its effect on N2O production.". Trabalho apresentado em ECSA56, Berman, 2016. Publicado Magalhães, Catarina. "Séneca J, Magalhães C, Monteiro M, Torgo L, Lee C, Cary C. Distribution of prokaryotic communities and NifH gene diversity in the extreme Darwin Mountains, Antarctica.". Trabalho apresentado em XXXIV SCAR Conference, Kuala Lumpur, 2016. Publicado Magalhães, Catarina. "Monteiro M, Séneca J, Torgo L, Baptista M, Lee C, Cary C, Magalhães C. The impact of environmental changes on nitrifyng communities from the Dry Valleys of Antarctica.". Trabalho apresentado em XXXIV SCAR Conference, Kuala lumpur, 2016. Publicado Magalhães, Catarina. "Santos J, Monteiro M, Mendes D, Ribeiro H, Borges T and Magalhães C. Salinity as a key selector on the activity and diversity of ammonium oxidizers in estuarine systems.". Trabalho apresentado em ECSA56, Bremen, 2016. Publicado Magalhães, Catarina. "Monteiro M, Seneca J, Torgo L, Baptista M, Lee C, Cary C, Magalhães C. Testing how changes in environmental variables promote shifts in nitrogen pathways and prokaryotic communities in soils from extreme Antarctic Dry Valleys". Trabalho apresentado em 60th New Zealand Microbiological Society Conference, Rotorua, 2015. Publicado Magalhães, Catarina. "Santos J, Monteiro M, Mendes D, Ribeiro H, Borges T, Magalhães C. The role of an estuarine salinity gradient on key nitrogen processes". Trabalho apresentado em BioMicroWord 2015 Conference, Barcelona, 2015. Publicado Magalhães, Catarina. "Rego A, Martins T, Costa MS, Ramos V, Vasconcelos V, Magalhães C, Leão P. Endolithic Cyanobacteria from extreme environments: biodiversity and chemodiversity.". Trabalho apresentado em 4º Congresso Ibérico de Cianotoxinas, Lisboa, 2015. Publicado Magalhães, Catarina. "Magalhães C, Machado A., Frank-Fahle B., Lee CK, Cary SC. The ecological dichotomy of ammonia oxidizing archaea and bacteria in the hyper-arid soils of the Antarctic Dry Valleys.". Trabalho apresentado em XXXIII SCAR Meeting, Auckland, 2014. Publicado Magalhães, Catarina. "Monteiro MA, Rábano O, García C, Salgado P, Silva J, Mucha AP, Arenas F, Magalhães C. Effects of macroalgae invasive species and temperature on estuarine sediments microbial communities and nitrogen biogeochemistry". Trabalho apresentado em ECSA 54 Conference, Sesimbra, 2014. Publicado Magalhães, Catarina. "Apresentação N, Rocha I, Cunha J, Monteiro M, Sénica J, Morais P, Sousa R, Magalhães C. Effect of the invasive species Corbicula fluminea on key N- biogeochemical pathways.". Trabalho apresentado em ECSA 54 Conference, Sesimbra, 2014. Publicado Magalhães, Catarina. "Magalhães C, Stevens MI, Cary SC, Ball BA, Storey BC, Wall DH, Turk R, Ruprecht U. At limits of life: multidisciplinary insights reveal environmental constraints on biotic diversity in continental Antarctica.". Trabalho apresentado em XIth SCAR Biology Symposium, Barcelona, 2013. Publicado Magalhães, Catarina. "Bordalo AA, Teixeira C, Machado A, Magalhães C, Wiebe WJ, Chalermwat K. Key inorganic nitrogen processes along a salinity gradient in the tropical Bangpakong River estuary (Eastern Thailand).". Trabalho apresentado em ECSA, Veneza, 2012. Publicado Magalhães, Catarina. "Mucha AP, Teixeira C, Magalhães C, Bordalo AA, Almeida CMR. Response of salt marsh microbial community to metal contamination.". Trabalho apresentado em ECSA, Veneza, 2012. Publicado
Tese / Dissertação	Magalhães, Catarina. "Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro estuary: processes and communities.". Doutoramento, Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, 2006. Magalhães, Catarina. "Oxygen and Nutrient Fluxes between Intertidal Sediment-Water Interfaces in the Douro River Estuary, Portugal.". Mestrado, Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, 1999.

Propriedade Intelectual

Pedido provisório de patente

2023. "Synergistic bioremediation composition".
Protegido
2021. "Device for capturing in situ aquatic microbiomes. EP3887536 A1; CN 113166791.".
Protegido

Outros

Conjunto de dados

Magalhães, Catarina. Exploring Fronts With Multiple Robots – Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018. https://www.ebi.ac.uk/ena/browser/view/PRJEB32783.
Magalhães, Catarina. Oceanographic profiles of 100 CTD casts performed during SOI cruise “Exploring Fronts With Multiple Robots” from the Pacific Ocean in 2018. https://doi.pangaea.de/10.1594/PANGAEA.903405.
Magalhães, Catarina. SSU rRNA amplicon of the Arctic Ocean during Winter-Spring Transition. https://www.ebi.ac.uk/ena/browser/view/PRJEB21950.
Magalhães, Catarina. Arctic microbiome along Svalbard Cross Shelf transects (16S rRNA and 18S rRNA). https://www.ebi.ac.uk/ena/browser/view/PRJEB24517.
Magalhães, Catarina. Arctic microbiome along Svalbard Cross Shelf transects (Metagenomes). https://www.ebi.ac.uk/metagenomics/studies/MGYS00003725.
Magalhães, Catarina. Metagenomes of the Arctic Ocean during Winter-Spring Transition. https://www.ebi.ac.uk/metagenomics/studies/MGYS00001922.
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. PR-JEB87662. https://www.ebi.ac.uk/metagenomics/studies/MGYS00001935.

Outra produção

Diário da expedição à Antártida - PROPOLAR. Trabalho de colaboração entre o CIIMAR, Televisão da Universidade do Porto (TVU) e Propolar.. 2014. Magalhães, Catarina. https://prezi.com/fn5hwggz0wrm/diario-da-expedicao-a-antartida-propolar/?utm_campaign=share&utm_medium=copy-http://tv.up.pt/premiums/23.

Atividades

Apresentação oral de trabalho

	Título da apresentação	Nome do evento Anfitrião (Local do evento)
2021/12	Approaches, methods and challenges in Microbiome Research - https://fems-microbiology.org/opportunities/fems-microbiology-ecology-webinar-on-approaches-methods-and-challenges-in-microbiome-research/	FEMS Webinar
2020/12	Magalhães C. Um Planeta em Mudança: O Exemplo do Oceano ´Artico - https://www2.ciimar.up.pt/events.php?id=208	Conversas com Ciência Fundação de Serralves
2019/12/07	TEDex - "Feeling a Changing Planet" \| "Sentir um Planeta em Mudança"	TEDex Conference TEDex (Matosinhos, Portugal)
2019/02/05	Biogeography of Arctic microbial nitrogen-cycling traits in the Svalbard shelf	8th Polar & Alpine Microbiology 2019 Conference University of Waikato, Hamilton, New Zealand (Hamilton, Nova Zelândia)
2018/12/10	Understanding Ocean Fronts Together: Cross disciplinary approach to study genetic signatures of plankton diversity across Pacific Subtropical Front.	MARTECH, 8th InternationalWorkshop on Marine Technology Faculdade de Engenharia, Universidade do Porto (Porto, Portugal)
2018/12/10	An autonomous biosampler to capture in situ aquatic microbiomes.	MARTECH, 8th International Workshop on Marine Technology Faculdade de Engenharia, Universidade do Porto (Por, Portugal)
2018/10/26	Biogeography of Arctic microbial communities across the Svalbard shelf.	10th Portuguese Conference on Polar Science Aveiro (Aveiro, Portugal)
2018/05/16	Oceanographic Expedition to the Pacific Ocean	Plenary at CLIP International School CLIP International School (Porto, Portugal)
2018/05	Antarctica the most extreme continent of our planet	Plenary at Elementar School of Vale do Este Elementar School of Vale do Este (Vila Nova de Famalicão, Portugal)
2018/05	Expedition to the dry valleys of Antarctica, where life exists in its limit.	Plenary at Secondary School Secondary School Colégio do Minho (Viana do Castelo, Portugal)
2018	Exploring microbial diversity through ecosystems in the NGS era.	5th Workshoop on NGS platforms users Universidade de Coimbra (Coimbra, Portugal)
2017/11/15	MarinEye: An autonomous system for integrated marine monitoring	MARTECH, 7th InternationalWorkshop on Marine Technology CIIMAR, Universidade do Porto (Porto, Portugal)
2017/07/07	Response of Antarctic desert microbial communities to extreme environmental disturbance	9th Portuguese Polar Conference Universidade da Beira Interior (Guarda, Portugal)
2017/06	An emerging view of nitrogen cycle: from temperate to extremely cold environment	National Science and Technology Summit Fundação para a Ciência e a Tecnologia (Lisboa, Portugal)
2017/05	Antarctica the most extreme continent of our planet.	Plenary at a Secondary School Secondary school of Fafe (Fafe, Portugal)
2017/04	Expedition to the dry valleys of Antarctica, where life exists in its limit.	Scientific Day Ermesinde Secondary school (Ermesinde, Portugal)
2016/12/16	Portuguese participation in the Ocean Sampling Day (OSD) and MyOSD initiatives: global events for capturing ocean microbial diversity.	ISME Advanced Seminars in Microbial Ecology Instituto Superior Técnico (Lisboa, Portugal)
2016/11/17	Development of an autonomous system for integrated marine monitoring.	Workshop - Programa de Gestão integrada das Águas Marinhas e Costeiras do EEA Grants - Investigação e Desenvolvimento Tecnológico Business2Sea (Porto, Portugal)
2016/09/16	Distribution and Environmental Controls on Marine Nitrogen Biogeochemical Functions.	41st CIESM Congress CIESM (Kiel, Alemanha)
2016/09/15	Development of an autonomous system for integrated marine monitoring	41st CIESM Congress CIESM (Kiel)
2016/09/06	Development of an autonomous system for integrated marine monitoring.	XIX Iberian Symposium on Marine Biology Studies CIIMAR (Porto, Portugal)
2016/08/08	Everything is not everywhere: Antarctica Dry Valleys as an extreme counter example	XXXIV SCAR Meeting SCAR (Kuala Lumpur, Malásia)
2016/07	Antarctic Deserts where Life Exists at its Limits	National Science and Technology Summit Fundação para a Ciência e a Tecnologia (Lisboa, Portugal)
2016/04/26	An Emerging View of the Nitrogen Cycle: From Temperate to cold Extreme environments	Excellence and Professionalism Seminar on Environmental Science and Technology Faculdade de Ciências da Universidade do Porto (porto, Portugal)
2015/05	Expedition to the dry valleys of Antarctica, where life exists in its limit.	Scientific Show ”To be great, be whole” Secondary school of Ermesinde (Porto, Portugal)
2014/08/27	The ecological dichotomy of ammonia oxidizing archaea and bacteria in the hyper-arid soils of the Antarctic Dry Valleys.	XXXIII SCAR Meeting SCAR (Auckland, Nova Zelândia)
2014/05/27	Influence of DMSP degradation products on the N2O reduction step of denitrification and the salinity side effect.	6th DMS(P) Symposium CSIC - Barcelona (Barcelona, Espanha)
2014/01	Expedition to the dry valleys of Antarctica, the most inhospitable deserts of our planet.	Exposition "Deserts - life on the edge" CMIA - Centro de Monitorização Ambiental (Vila do Conde, Portugal)
2013/12	Expedition to the dry valleys of Antarctica, where life exists in its limit	Initiative Coffee with a Scientist Ciencia Viva Science Centre (Bragança, Portugal)
2013/07/19	At limits of life: multidisciplinary insights reveal environmental constraints on biotic diversity in continental Antarctica.	XIth SCAR Biology Symposium ICM-CSIC (Barcelona, Espanha)
2013	The importance of wetlands in the biogeochemical processes of Nitrogen removal	Workshop in Phytoremediation and Bioremediation CIIMAR, University of Porto (Porto, Portugal)
2012	An emerging view of nitrogen cycle: processes and communities.	CIIMAR - Oceanus Seminar CIIMAR, University of Porto (Porto, Portugal)
2010/10	A novel inhibitory interaction between dimethylsulfoniopropionate (DMSP) and the denitrifcation pathway	5th International Symposium on Biological and Environmental Chemistry of DMS(P) and Related Compounds (Goa, Índia)
2009	Dynamics of the marine nitrogen cycle: key processes, communities and anthropogenic impacts.	Fundação para a Ciência e a Tecnologia National Science and Technology Summit (Lisboa, Portugal)
2009	Dynamics of the marine nitrogen cycle: key processes, communities and anthropogenic impacts	CIIMAR - Oceanus Seminar CIIMAR, University of Porto (P, Portugal)
2009	DMSP and methionine degradation exacerbates N2O production: from bacterial cultures to estuarine sediments.	ASLO Conference ASLO (Nice, França)
2008/04	Inhibitory effects of DMSP degradation products on denitrication in coastal marine sediments and in a bacterial culture.	Department of Biology Seminars Department of Biology, University of Waikato, NZ (hamilton, Nova Zelândia)
2008	Inhibitory effects of DMSP degradation products on denitrification in coastal marine sediments and in a bacterial culture.	2th International Symposium on Microbial Ecology (ISME12) ISME (Cairns)
2007	Comparison of Ammonia Oxidizing Bacterial Phylotypes and Function Between Intertidal Rocky Biofilms and Sediments of the Douro River Estuary, Portugal.	CIIMAR - Oceanus Seminar CIIMAR, University of Porto (porto, Portugal)
2007	Quantitative analysis of ammonia oxidizing bacteria vs archaea in an intertidal sandy flat: Douro estuary, Portugal	10th Symposium on Aquatic Microbial Ecology Faro University (Faro, Portugal)
2007	A novel inhibitory interaction between marine nitrogen and sulfur cycles. 10th Symposium on Aquatic Microbial Ecology	10th Symposium on Aquatic Microbial Ecology University of Faro (Faro, Portugal)
2006	Denitrifying Community Dynamics and Function in Intertidal Rocky Biofilms and Sediments of the Douro River Estuary (Portugal).	5th Symposium on the Atlantic Iberian margin Aveiro University (Aveiro, Portugal)
2006	Comparison of inorganic nitrogen dynamics in intertidal rocky biofilms and sediments: Douro River Estuary (Portugal)	9th International Estuarine Biogeochemistry Symposium (Warnemünde)
2006	Composition and biogeochemical activity of ammonia oxidizing bacterial communities associated with intertidal rocky biofilms and sediments of the Douro River estuary, Portugal.	XIII Iberian Seminar in Marine Chemistry IPMA (Lisboa, Portugal)
2003	Salinity and inorganic effects on nitrification and denitrification rates in intertidal sediments and rocky biofilms	7th International Specialised Conference on Diffused Pollution and Basin Management University of Dublin (Dublin, Irlanda)
2001	Unrecognized role of rocky biofilms in estuarine carbon and nutrient dynamics	16th Biennial Conference of the Estuarine Research Federation ECSA (Florida, Estados Unidos)
2000	Intertidal environments in Douro estuary: seasonal community metabolism, microphytobentic composition and nutrient fluxes.	31st Annual Symposium of the Estuarine and Coastal Sciences Association ECSA (Bilbao, Espanha)
1999	Intertidal Sediments in the Douro River Estuary, Portugal: High Primary Productivity and Inorganic Nutrient Sequestration.	15th Biennial International Conference of Estuarine Research Federation’ 99. ECSA (New Orleans, Estados Unidos)

Orientação

	Título / Tema Papel desempenhado	Curso (Tipo) Instituição / Organização
2024 - Atual	Metal impacts and bioremediation potential of deep-sea bacteria and microbial communities Coorientador	Contaminação e Toxicologia Ambientais (Doutoramento) Universidade do Porto, Portugal
2024 - Atual	Decipher Climate Change Impacts on the Arctic Ocean Nitrogen Microbiome Orientador	Biodiversidade, Genética e Evolução (Doutoramento) Universidade do Porto, Portugal
2024 - Atual	Atmospheric rivers role an extreme temperatures and precipitation and potential effect on microbial biodiversity on the Antarctic Peninsula Coorientador	Biodiversidade, Genética e Evolução (Doutoramento) Universidade do Porto, Portugal
2023 - Atual	Exploring microplankton interactions and their functional roles in a changing Arctic Ocean Orientador	Ciência, Tecnologia e Gestão do Mar (Doutoramento) Universidade do Porto, Portugal
2021 - Atual	Exploring climate change effects on interannual microbiome diversity and functions in the Arctic Ocean. Orientador	Master in bioinformatics and computational biology (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2021 - Atual	Exploring planktonic microbiome diversity and functions in the coastal ecosystems of the North of Portugal. Orientador	Master in Microbiology (Mestrado) Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
2021 - Atual	Metal impacts on deep-sea bacterial metabolism and ecosystem functioning. Coorientador	Master in Applied Microbiology (Mestrado) Universidade Católica Portuguesa Escola Superior de Biotecnologia, Portugal
2019 - Atual	Distribution and Diversity of bacterial biosynthetic genes across multiple ecosystems Orientador	Ciências Biomédicas (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2018 - Atual	Unravelling Arctic Fjord Microbiome Diversity trough Metabarcoding Approach in Kongsfjorden Sea, Svalbard Orientador	Biodiversidade e Recursos Genéticos (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2017 - Atual	Modelling biofilm microbial community to optimize water quality and fish health in a marine Recirculating Aquaculture System Coorientador	Ciência Animal (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2016 - Atual	Understanding the interaction of marine nitrogen and organic sulfur cycles: from molecular to biogeochemical and ecological levels Orientador	Ciências do Mar e do Ambiente (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2015 - Atual	The role of Nitrification in the Antarctic Dry Valleys: Activity, Community Structure and Environmental Controls Coorientador	University of Waikato, Nova Zelândia
2012 - Atual	Salinity effect on nitrification rates along an estuarine gradient Orientador	Bioengenharia (Iniciação científica) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2021/01/01 - 2025/12/31	Unravelling marine microbial diversity for bioremediation of polluted environments Coorientador de Rafaela Alexandra Perdigão Mendes	Doutoramento em Cie^ncias do Meio Aqua´tico - Biologia e Ecologia (Doutoramento) Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2021/01/01 - 2025/12/31	Deciphering the roles of the prokaryotic rare biosphere in the Arctic Ocean under climate change Orientador de Francisco Pascoal	Programa de Doutoramento em Biologia da Faculdade de Ciências, Universidade do Porto (Doutoramento) Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2022 - 2024	Comparison of Different Approaches for Microbial Community Investigation of Arctic Ocean Samples Coorientador	Molecular Biology (Mestrado) Università degli Studi di Padova Dipartimento di Biologia, Itália
2021 - 2024	Unraveling Arctic Fjord Microbiome Diversity through Metabarcoding Approach in Kongsfjorden, Svalbard Orientador	Biodiversidade, Genética e Conservação (Mestrado) Universidade do Porto, Portugal
2020 - 2024	Harnessing the cooperative potential of the marine microbiome for hydrocarbon degradation Coorientador	Ciências do Mar e do Ambiente (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2021/01 - 2022/12	Exploring the link between ecological functions and biosynthetic pathways in Arctic Ocean microbiomes Orientador	Instituto Politécnico do Porto Escola Superior de Saúde, Portugal
2021 - 2022	Community dynamics and modulation during biofilter activation by Afonso Pinto. Coorientador	Master in Aquatic Biological Resources (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2021 - 2022	Dive into the blow microbiome: exploring microbial diversity of the respiratory tract in free ranging cetaceans. Coorientador	Master in Aquatic Biological Resources (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2021/01/01 - 2021/12/01	Temporal Dynamics of Microplankton Diversity in Kongsfjorden, a reference site of Arctic Warming. Orientador	Università degli Studi di Padova, Itália
2021 - 2021	Dive into the blow microbiome: exploring microbial diversity of the respiratory tract in free-ranging cetaceans Coorientador	Recursos Biológicos Aquáticos (Mestrado) Universidade do Porto, Portugal
2020 - 2021	WEEKLY FLUCTUATIONS OF MICROPLANKTON COMMUNITY STRUCTURE IN A CHANGING ARCTIC OCEAN Orientador	Biologia Molecular (Mestrado) Università degli Studi di Padova Dipartimento di Biologia, Itália
2019 - 2020/12	Biogeography of Arctic Eukaryotic Microbiome: a combining approach of metabarcoding, metagenomics and microscopic cell counts. Orientador	Ciências e Tecnologia do Ambiente (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2019 - 2020	Microplankton Dynamics across the North Pacific Subtropical Front Orientador	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2018 - 2019	Exploring the Gradients of Microbial Communities in the Arctic Ocean Orientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2018 - 2019	Response of the microorganisms involved in the nitrogen cycle to the increase of nanoparticles: a case study of the Douro estuary Coorientador	Recursos Biológicos Aquáticos (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2018 - 2019	Characterization of the microbial community and physical-chemical parameters of a RAS aquaculture system Orientador	Recursos Biológicos Aquáticos (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2018 - 2019	Harnessing the metabolic potential encrypted in marine microbial dark matter Coorientador	Microbiologia (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2017 - 2018	Development of native microbial consortia with a cooperative competence for petroleum compounds degradation Coorientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2017 - 2018	Exploring the Nitrogen Cycle in the Arctic Ocean Orientador	Ciências do Meio Aquático (Iniciação científica) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2016 - 2018	Development of a georeferenced library of native microbial consortia for bioremediation of oil spills Coorientador	Biodiversidade e Recursos Genéticos (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2018	Development of bioremediation technologies based on deep sea organisms Coorientador	Contaminação e Toxicologia Ambientais (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2017	Potential degradation of anthracene in estuarine sediments under nitrate reduction conditions Coorientador	Ciências e Tecnologia do Ambiente (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2017	Exploration of the biological and chemical diversity of Actinobacteria and Cyanobacteria from polar environments Coorientador	Bioengenharia (Iniciação científica) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2015 - 2017	Exploring Polar Microbiomes as Source of Bioactive Molecules Coorientador	Biologia Celular e Molecular (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2015 - 2017	Arctic microbiome and N-functions during the Winter-Spring Transition Orientador	Biologia Celular e Molecular (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2016/01 - 2016/07	Structure and dynamics of the Rare Biosphere in the Arctic Winter-Spring transition Orientador	Biologia Celular e Molecular (Iniciação científica) Universidade Nova de Lisboa, Portugal
2014 - 2016	Domain oriented biclustering validation Coorientador	Ciência de Computadores (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2016	Prokaryotic community structure and function along an estuarine salinity gradient and its role on key nitrogen processes Orientador	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2014 - 2015	A first attempt to how nitrogen is recycled in Transantarctic Mountains by using cultured dependent and independent approaches Orientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2015	Searching for new secondary metabolites in Antarctica Cyanobacteria Coorientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2015	Isolation, culturing and chemical exploration of Antarctica cyanobacteria Coorientador	Bioquímica (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2013 - 2015	Anaerobic Biodegradation of Biodiesel in Nitrate Reducing Conditions and Impacts on the biodegradation of Benzene and Toluene Coorientador	Ciências e Tecnologia do Ambiente (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2014	Diversity and abundance of bacteria vs archaea nitrifiers in the extreme Dry Valleys of Transantarctic Mountains Orientador	Biodiversidade e Recursos Genéticos (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2014	Interactive effect of exotic macroalgae degradation and climate-driven stressors on estuarine microbial communities involved in N biogeochemistry Orientador	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2013/01 - 2013/09	Effect of climate change and invasive species on microbial diversity in estuarine sediments Orientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2013/01 - 2013/09	Impact of climate-driven stressors on estuarine sediments microbial communities and nutrient biogeochemistry Orientador	Biologia (Iniciação científica) Universidade do Porto Faculdade de Ciências, Portugal
2013/01 - 2013/09	Relative bacteria and archaea abundance and distribution along a salinity estuarine gradient Orientador	Bioquímica (Iniciação científica) Universidade de Aveiro, Portugal
2013/01 - 2013/09	Bacteria and Archaea ammonia-oxidizers dynamics along a salinity estuarine gradient. Orientador	Biotecnologia (Iniciação científica) Universidade de Aveiro, Portugal
2011 - 2013	Regulatory control of salinity in changes on AOA and AOB abundance, diversity and activity Orientador	Microbiologia (Mestrado) Universidade de Aveiro, Portugal
2010 - 2012	Influence of salinity on DMSP and methionine degradation and its regulatory effect on the nitrous oxide reduction step of denitrification Orientador	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2006 - 2011	The role of anaerobic ammonium oxidation (Anammox) as a nitrogen sink in temperate estuarine environments Coorientador	Ciências do Mar e do Ambiente (Doutoramento) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2007 - 2009	Influence of salt marsh plants on the structure, abundance and activity of denitrifier communities, by Ana Machado. Master in Marine Sciences from ICBAS, University of Porto, Portugal (2007-2009). Coorientador	Ciências do Mar - Recursos Marinhos (Mestrado) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2007 - 2008	Dynamic of denitrifying communities in a tropical estuarine system: Bangpakong estuary, Thailand Coorientador	Microbiologia (Mestrado) Universidade de Aveiro, Portugal
2006 - 2007	Impact of heavy metals in the diversity of nitrite (nirK and nirS) and nitrous oxide (nosZ) genes and in denitrification pathway: Douro River estuary, Portugal, by Patrícia Matos. Degree in Biology from the University of Aveiro, Portugal (2006-2007). Coorientador	Biologia (Iniciação científica) Universidade de Aveiro, Portugal
2005 - 2006	Impact of heavy metals in estuarine sediments denitrification pathway: Douro River estuary, Portugal Coorientador	Ciências do Meio Aquático (Iniciação científica) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2005 - 2006	Denitrification in the subtidal sediments of Douro Estuary Coorientador	Engenharia do Ambiente (Mestrado) Universidade do Porto Faculdade de Engenharia, Portugal
2001 - 2002	Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal Orientador	Ciências do Meio Aquático (Iniciação científica) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Organização de evento

	Nome do evento Tipo de evento (Tipo de participação)	Instituição / Organização
2020 - Atual	Arctic Science Summit week 2021. https://assw2021.pt/ (2020) Congresso (Membro da Comissão Organizadora)	Fundação para a Ciência e a Tecnologia, Portugal
2021/11/29 - 2021/11/30	XIII PORTUGUESE CONFERENCE ON POLAR SCIENCES. https://ptpolarconf.wixsite.com/website-1 (2021/11/29 - 2021/11/30) Conferência (Presidente da Comissão Organizadora)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2020/11 - 2020/11	12th Portuguese Polar Conference (2020/11/03 - 2020/11/04) Conferência (Presidente da Comissão Organizadora)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2019/09/11 - 2019/09/13	24th European Nitrogen Cycle Meeting. http://24encm.eventos.chemistry.pt (2019/09/11 - 2019/09/13) Congresso (Membro da Comissão Organizadora)	Universidade Nova de Lisboa, Portugal
2017/09/11 - 2017/09/15	EUROMARINE OPEN SCIENCE EXPLORATION (EMOSE) 2017 EDITION. https://www.euromarinenetwork.eu/EMOSE and https://osf.io/u93qm/ (2017/10 - 2017/10) Oficina (workshop) (Presidente da Comissão Organizadora)	Centro Interdisciplinar de Investigação Marinha e Ambiental da Madeira, Portugal
2017/04/29 - 2017/04/29	Workshop “New Challenges in Ocean Observation” (2017/04/29 - 2017/04/29) Oficina (workshop) (Presidente da Comissão Organizadora)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014/10/30 - 2014/10/31	6th Polar Portuguese Conference ”Do Ártico à Antártida: Desafios e Perspectivas da Ciência e Educação Polares em Portugal”. http://cienciapolar.weebly.com/vii---reuniatildeo-2015---eacutevora.html (2014 - 2014) Congresso (Presidente da Comissão Organizadora)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

Participação em evento

	Descrição da atividade Tipo de evento	Nome do evento Instituição / Organização
2016/11/17 - Atual	CIIMAR Stand \| Stakeholders activities Exposição	Business2aea 2016
2018 - 2018	During the Schmidt Ocean Institute’s oceanographic campaign participated and organized several outreach activities with more than 40 schools with a participation of a total of 3205 participants from all over the world, with a high incidence in the USA and Europe. Outro	Outreach activities onboard Schmidt Ocean Institute Research Vessel
2012 - 2018	CIIMAR Stand outreach activities	Mostra da Universidade do Porto \| http://www.mostra.up.pt/ Universidade do Porto, Portugal
2016/09/05 - 2016/09/09	Session Chair Congresso	XIX Iberian Symposium on MarineBiology Studies Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014 - 2014	CIIMAR Stand \| Stakeholders Activities Exposição	Forum do Mar \| http://www.forumdomar.exponor.pt/
2014 - 2014	CIIMAR Stand \| Stakeholders Activities Exposição	Ocean Business Week 2015 \| http://oceansbusinessweek.fil.pt
2014 - 2014	Exposition “Desertos: a Vida no Limite “ Exposição	CMIA - Centro de Monitorização Ambiental , Portugal
2014 - 2014	Photograph Exposition “In the Limits of science: the portuguese research in the Arctic and Antarctica Exposição	PROPOLAR-Programa Polar Português, Portugal
2012/06/24 - 2012/06/29	Session Chair. https://www.grc.org/marine-microbes-conference/2012/ Congresso	2012 Marine Microbes Conference GRC. Bridging the Gaps from Genomes to Biomes. Gordon Research Conferences, Estados Unidos

Júri de grau académico

	Tema Tipo de participação	Nome do candidato (Tipo de grau) Instituição / Organização
2024/04/15	Microbiota de recifes de coral e potencial de substância húmidas na melhoria da resiliência dos recifes Arguente	Tamara Maria Stuij (Doutoramento) Universidade de Aveiro, Portugal
2024/04	Ecologia e genética de simbiontes microbianos marinhos Arguente	Marina Rafaela dos Santos Ferreira (Doutoramento) Universidade de Aveiro, Portugal
2023/12/21	Exploring the Microbial Diversity of Portuguese Saltern Environments Arguente	Maria Eduarda Marques de Almeida (Doutoramento) Universidade do Porto, Portugal
2022/05/02	Assessing the coding potential of Vibrionaceae spp. and the validity of green methodologies to modulate microbiome assembly in fish larviculture Arguente	Gracinda Maria Martins Sanches Fernandes (Doutoramento) Universidade de Lisboa Instituto Superior Técnico, Portugal
2022/02/10	AZORES OCEANIC MICROBES: UNDERSTANDING THE STRUCTURE AND DYNAMICS OF MICROBIAL COMMUNITIES AT VARIOUS OCEAN SPACE AND TIME SCALES Arguente principal	Clara Loureiro (Doutoramento) Universidade dos Açores, Portugal
2018/07	Metagenomics and functional genomics of bacterial symbionts of Spongia (Porifera,Dictyoceratida) specimens from the Algarvian shore (South Portugal) Arguente principal	Elham Karini (Doutoramento) Universidade do Algarve - Campus de Gambelas, Portugal
2018/04	Oil decontamination by benthic microbial communities Arguente	António Miguel de Oliveira Louvado (Doutoramento) Universidade de Aveiro, Portugal
2018/04	Microbial ecology in Azores deep seafloor hydrothermal environments Arguente principal	Maria Teresa Sousa Barros Cerqueira (Doutoramento) Universidade dos Açores - Campus da Horta, Portugal
2017	Dealing with Hydrocarbons: from Planctomycetes to microbial community Arguente principal	Teresa Filipa Botelho Carvalho (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2014/09	Microbe-mediated recovery of salt marshes contaminated with oil hydrocarbons Arguente	Vanessa Jesus Oliveira (Doutoramento) Universidade de Aveiro, Portugal
2013/09	Epiphytic Planctomycetes from macroalgae: insights of their morphology, physiology and ecology Arguente principal	Joana Bondoso (Doutoramento) Universidade do Porto Faculdade de Ciências, Portugal

Arbitragem científica em conferência

	Nome da conferência	Local da conferência
2023/11/02 - 2023/11/03	XV Portuguese Polar Conference. https://conferenciapolar.wixsite.com/conferenciapolar2019	Instituto Superior Tecnico, Universidade de Lisboa
2022/11/18 - 2022/11/19	XIV Portuguese Polar Conference	Universidade do Algarve, CCMAR
2019/10/24 - 2019/10/25	11th Portuguese Polar Conference. https://conferenciapolar.wixsite.com/conferenciapolar2019	Universidade de Coimbra
2018/10/25 - 2018/10/26	10th Portuguese Polar Conference. http://conferenciapolar.web.ua.pt/	Universidade de Aveiro
2017/11/06 - 2017/11/07	9th Portuguese Polar Conference. http://cienciapolar.segal.ubi.pt/	Universidade da Beira Interior
2016/10/26 - 2016/10/28	8th Portuguese Polar Conference. http://cienciapolar.weebly.com/viii-conferencia-2016---lisboa.html	IGOT, Universidade de Lisboa
2015/10/28 - 2015/10/29	7th Polar Portuguese Conference	Universidade de Évora

Curso / Disciplina lecionado

	Disciplina	Curso (Tipo)	Instituição / Organização
2016 - 2020	Lecturer on the subject of Aquatic Biodiversity	Recursos Biológicos Aquáticos (Mestrado integrado)	Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2019	Lecturer on the subject of Biology of Algae and Fungi	Biologia (Licenciatura)	Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2019	Lecturer on the subject of Introduction to microbiology	Ciências e Tecnologia do Ambiente (Licenciatura)	Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2016	Lecturer and coordinator of the intensive course “Preparation of Biological Samples for Molecular Analysis”	(Curso de Especialização Tecnológica)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2016 - 2016	Coordinator of the intensive course on “Laboratory Analytic Techniques”	(Curso de Especialização Tecnológica)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2010 - 2012	Lecturer on the subject Marine and Estuarine Ecology	Ciências do Meio Aquático (Licenciatura)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2009 - 2009	Lecturer on the subject General Agriculture and Ecology	Ciências do Meio Aquático (Licenciatura)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2008 - 2009	Lecturer on the subject on aquatic microbial ecology	Ciências do Meio Aquático (Licenciatura)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2008 - 2008	Lecturer on the subject marine ecology laboratory	Ciências do Meio Aquático (Licenciatura)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
1998 - 2001	Lecturer on the subject General Ecology, laboratory classes	Medicina (Licenciatura)	Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
1997 - 1997	Lecturer on the subject biological laboratory techniques and general biology	(Ensino secundário)	Escola Secundária António Nobre, Portugal

Entrevista / Programa (rádio / tv)

	Programa	Tema
2019/07 - Atual	News Antena 1	Interview about climate change global implications on behalf of the 2019 United Nations Report on Climate Change
2018 - Atual	90 segundos Ciência \| 90 seconds of Science	Cold Deserts Antarctic Research
2017/06/25 - Atual	Interview in SIC Notícias	MarinEye Project
2016 - Atual	Mentes que Brilham	MarinEye Project
2015 - Atual	SIC Notícias - Daily News	Portuguese Arctic Campaign 2014 - 2015
2022 - 2022	Programa BIOSFERA RTP	Criosfera
2021 - 2021	Interview SIC Notícias	Investigadores portugueses estudam efeitos das alterações climáticas nos Polos

Membro de associação

	Nome da associação	Tipo de participação
2017 - Atual	Inter-comparison of marine plankton metagenomic methods consortium. https://www.euromarinenetwork.eu/EMOSE	Member of scientific consortium analysis
2015 - Atual	Aerobiology Over Antartic consortium. http://journal.frontiersin.org/article/10.3389/fmicb.2016.00016/full	Member of scientific consortium analysis
2014 - Atual	Ocean Sampling day analysis consortium. https://gigascience.biomedcentral.com/articles/10.1186/s13742-015-0066-5	Member of scientific consortium analysis

Tutoria

	Tópico	Nome do aluno
2019 - Atual	Microbial communities characterization and modulation in recirculation aquaculture systems (RAS).	Miguel Semedo. Postdoctoral researcher
2015 - Atual	Developing an workflow to access prokaryotic (Bacteria and Archaea) and unicellular eukaryotic diversity based on NGS technology	Maria Paola Tomasino. Postdoctoral researcher
2015 - Atual	Nitrogen point source tracking and its level of dispersion in terrestrial and near shore Antarctica environments: a case study of Cape Adare penguin colony	Mafalda Baptista. Postdoctoral researcher
2021/09/01 - 2023/08/31	Metal impacts on deep-sea microbial communities and function - Postdoctoral Research - Marie Sklodowska-Curie Widening Fellowship	Miguel Semedo
2022 - 2023	Comparison of Different Approaches for Microbial Community Investigation of Arctic Ocean Samples	Nicola Gambardella
2021 - 2023	Unraveling Arctic Fjord Microbiome Diversity through Metabarcoding Approach in Kongsfjorden, Svalbard	Patrick Egon Carneiro Santos
2018 - 2019	Adsorption of metallic nanoparticles to estuarine sediments and its implication for denitrification	Joana Costa. Postdoctoral researcher
2017 - 2018	Linking the biogeochemistry of aquatic and terrestrial interfaces to understand the functioning of rivers in the face of global change	Maria Isabel Arce Sánchez. Postdoctoral researcher
2016 - 2018	Development of an autonomous biosampler to capture in situ aquatic microbiomes using validate standard methodologies	Hugo Ribeiro. Postdoctoral researcher
2014 - 2015	Potential of an estuarine denitrifying consortium in anaerobic degradation of polycyclic aromatic hydrocarbons	Trelina de Sousa. Postdoctoral researcher

Distinções

Prémio

2019	International Visiting Research Grant Ocean Frontier Institute, Canadá
2014	International Visiting Research Grant for research collaboration activities at University of Waikato, NZ. Scientific Committee on Antarctic Research (AnT-ERA), Reino Unido
2013	Research Starting Grant (IF-FCT) Fundação para a Ciência e a Tecnologia, Portugal
2012	Post Doctoral mixed Fellowship between CIIMAR, University of Porto and University of Waikato, New Zealand Fundação para a Ciência e a Tecnologia, Portugal
2009	Early Career travel award to ASLO meeting Association for the Sciences of Limnology and Oceanography, Estados Unidos
2006	Post Doctoral Mixed Fellowship between CIIMAR, University of Porto and University of South Alabama, USA. Fundação para a Ciência e a Tecnologia, Portugal
2002	Early Career travel award to ECSA meeting Estuarine & Coastal Sciences Association, Reino Unido
2000	PhD mixed Scholarship between University of Porto and University of Georgia, USA Fundação para a Ciência e a Tecnologia, Portugal
2000	Student award for Summer Course attendance Fundação Calouste Gulbenkian, Portugal
1998	Visiting Research Fellowship at University of Georgia, USA. Fundação Luso-Americana, Portugal

Título

2023	Member of the Executive Committee of the Department of Biology, University of Porto
2022	Portuguese delegate of the IASC Marine Working Group (MWG-IASC) Fundação para a Ciência e a Tecnologia, Portugal
2022	Member of the Polar Expert Group (PEG) from the EU-PolarNet2
2014	Member of the coordination committee of Portuguese Polar Program, Portuguese

Outra distinção

2018	Project SPILLESS where C. Magalhães was a core team member was awarded with the Atlantic Project Awards 2018 in the category of promotion of entrepreneurship and innovation Atlantic Action Plan, EU, Bélgica
2018	Project MarinEye lead by C. Magalhães was awarded with one honourable mention in the Sustain-ability category, of the prize ”The Best of Technological Portugal” Exame Informática Magazine, Portugal