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Identification

Personal identification

Full name
FRANCISCO DIOGO DE ALMEIDA CERQUEIRA

Citation names

  • Cerqueira, Francisco

Author identifiers

Ciência ID
A51C-8B2B-20DA
ORCID iD
0000-0003-4812-0880

Telephones

Mobile phone
  • (+351) 911530668 (Personal)

Knowledge fields

  • Natural sciences - Biological Sciences - Biology

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Proficiency (C2) Advanced (C1) Proficiency (C2) Advanced (C1)
Spanish; Castilian Intermediate (B1) Advanced (C1) Intermediate (B1) Upper intermediate (B2) Intermediate (B1)
Education
Degree Classification
2016/10 - 2020/06/08
Concluded
 AgriFood Technology and Biotechnology (Doctor)
Instituto de Diagnóstico Ambiental y Estudios del Agua, Spain
"Influence of agricultural practices on the microbiome and the antibiotic resistance gene complement in soils, plants, and crops" (THESIS/DISSERTATION)
Affiliation

Science

Category
Host institution 		Employer
2020/09/01 - Current Postdoc (Research) Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal
2016/05/15 - 2019/05/16 Researcher (Research) Instituto de Diagnóstico Ambiental y Estudios del Agua, Spain
Projects

Grant

Designation Funders
2015/10 - 2019/09 ANtibioticS and mobile resistance elements in WastEwater Reuse applications: risks and innovative solutions
675530
 European Commission
Concluded
Outputs

Publications

Journal article
  1. Cerqueira, Francisco. "Occurrence and human health risk assessment of antibiotics and their metabolites in vegetables grown in field-scale agricultural systems". Journal of Hazardous Materials 401 (2021): 123424-123424. http://dx.doi.org/10.1016/j.jhazmat.2020.123424.
    10.1016/j.jhazmat.2020.123424
  2. Cerqueira, Francisco. "Effects of prescription antibiotics on soil- and root-associated microbiomes and resistomes in an agricultural context". Journal of Hazardous Materials 400 (2020): 123208-123208. http://dx.doi.org/10.1016/j.jhazmat.2020.123208.
    10.1016/j.jhazmat.2020.123208
  3. Cerqueira, Francisco. "Antibiotic resistance gene distribution in agricultural fields and crops. A soil-to-food analysis". Environmental Research 177 (2019): 108608-108608. http://dx.doi.org/10.1016/j.envres.2019.108608.
    10.1016/j.envres.2019.108608
  4. Cerqueira, Francisco. "Distribution of antibiotic resistance genes in soils and crops. A field study in legume plants (Vicia faba L.) grown under different watering regimes". Environmental Research 170 (2019): 16-25. http://dx.doi.org/10.1016/j.envres.2018.12.007.
    10.1016/j.envres.2018.12.007
  5. Cerqueira, Francisco. "Antibiotic resistance genes distribution in microbiomes from the soil-plant-fruit continuum in commercial Lycopersicon esculentum fields under different agricultural practices". Science of The Total Environment 652 (2019): 660-670. http://dx.doi.org/10.1016/j.scitotenv.2018.10.268.
    10.1016/j.scitotenv.2018.10.268
  6. Célia M. Manaia; Jaqueline Rocha; Nazareno Scaccia; Roberto Marano; Elena Radu; Francesco Biancullo; Francisco Cerqueira; et al. "Antibiotic resistance in wastewater treatment plants: Tackling the black box". Environment International 115 (2018): 312-324. https://doi.org/10.1016/j.envint.2018.03.044.
    10.1016/j.envint.2018.03.044
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2018/11/11 Antibiotic resistance genes distribution and microbiomes along the soil-plant continuum in Vicia Faba fields in Catalonia. XENOWAC II
(Limassol, Cyprus)
2018/11/11 Antibiotic resistance genes distribution in microbiomes from Lycopersicon esculentum fields in Catalonia. (poster) XENOWAC II
(Limassol, Cyprus)
2018 Antibiotic Resistance Genes distribution in microbiomes from the soil-plant continuum in commercial agricultural fields in Catalonia. (poster presentation). Halting Antimicrobial Resistance Dissemination in Aquatic Environments (HEARD2018)
(Ascona, Switzerland)
2017/07/18 Distribution of Antibiotic Resistance Genes and Microbiome analysis in agricultural soil and Edible Plants in Catalonia. 10th Micropol & Ecohazard Conference 2017
(Viena, Austria)

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2022/01/31 - 2022/02/04 Curso SymbNET: From metagenomics to metabolic interactions
Other
 SymbNET: From metagenomics to metabolic interactions
European Bioinformatics Institute, United Kingdom
2021/09/21 - 2021/09/23 Curso: Introduction to Metagenomic Data Analysis. Edinburgh Genomics, University of Edinburgh
Other
 Introduction to Metagenomic Data Analysis
The University of Edinburgh, United Kingdom
2020/11/25 - 2020/11/27 IGC’s pratical course on laboratory animal sciencia in mouse and zebrafish. Instituto Gulbenkian de Ciência
Workshop
 IGC’s pratical course on laboratory animal sciencia in mouse and zebrafish
Instituto Gulbenkian de Ciência, Portugal
2020/11/14 - 2020/11/16 Congento LAS Theory Course for Functions A, C & D (According to the EC EWG Common Framework for Education and training in laboratory animal science.
Other
Instituto Gulbenkian de Ciência, Portugal
2018/11/15 - 2018/11/18 Hellenic Bioinformatics. "Genome Informatics, Precision Medicine & Clinical Omics in a world of Data Economies", Greece.
Conference
International Society for Computational Biology, United States
2018/04/23 - 2018/04/30 Curso: Microbial Metagenomics: A 360o approach. European Molecular Biology Organization (EMBO)
Other
 Microbial Metagenomics: A 360o approach
European Molecular Biology Laboratory, Germany
2018/03/19 - 2018/03/23 INTRODUCCIÓN AL PYTHON PARA CIENTÍFICOS
Other
 INTRODUCCIÓN AL PYTHON PARA CIENTÍFICOS
Agencia Estatal Consejo Superior de Investigaciones Científicas, Spain
2018/03/12 - 2018/03/15 OPTIMIZANDO EL USO DE R PARA ANÁLISIS DE DATOS EN AGRONOMÍA Y ECOLOGÍA
Other
 OPTIMIZANDO EL USO DE R PARA ANÁLISIS DE DATOS EN AGRONOMÍA Y ECOLOGÍA
Agencia Estatal Consejo Superior de Investigaciones Científicas, Spain
2017/07/05 - 2017/07/07 H2020-MSCA-ITN-2015/675530 ANSWER Training Event-D. Wastewater microbiota and the effects of treatment processes.
Other
 H2020-MSCA-ITN-2015/675530 ANSWER Training Event-D. Wastewater microbiota and the effects of treatment processes.
Universidade Católica Portuguesa Escola Superior de Biotecnologia, Portugal
2017/04/10 - 2017/04/14 Estadística aplicada I. Estadística aplicada I.
Agencia Estatal Consejo Superior de Investigaciones Científicas, Spain
2017/03/05 - 2017/03/05 H2020-MSCA-ITN-2015/675530 ANSWER Training Event-C. Microcontaminants in the aquatic water cycle- wastewater reuse- the Cypriot/Israeli experience, Hebrew University of Jerusalem H2020-MSCA-ITN-2015/675530 ANSWER Training Event-C. Microcontaminants in the aquatic water cycle- wastewater reuse- the Cypriot/Israeli experience
Agricultural Research Organization Volcani Center, Israel
2016/09/12 - 2016/09/16 H2020-MSCA-ITN-2015/675530 ANSWER Training Event-A. Statistics and models for environmental data, Technical Univeristy of Dresden.
Other
 H2020-MSCA-ITN-2015/675530 ANSWER Training Event-A. Statistics and models for environmental data
Technische Universität Dresden, Germany