???global.info.a_carregar???
Prof. Miguel Coimbra is currently a Full Professor at the Computer Science Department of the Faculty of Sciences of the University of Porto. He is a member of the Executive Board of the Faculty of Sciences of the University of Porto since 2019, current coordinator of the TEC4Health line of INESC TEC, and past Chair of the Portugal Chapter of the IEEE Engineering and Medicine Society (2017-2021). He was one of the founders of IT Porto in 2007, its coordinator during 2015-19 and founder of the Interactive Media Group at this institute. He was the Director of the Master in Medical Informatics of the University of Porto between 2014-16, and was a co-founder in 2013 of IS4H - Interactive Systems for Healthcare, a spin-off company of the University of Porto. Prof. Coimbra leads and participates in various projects involving engineering and medicine, namely cardiology and gastroenterology, with current and past collaborations with hospitals in Portugal, Brazil (Pernambuco, Paraíba, Minas Gerais, São Paulo), Germany and Sweden. The nearly 19 years of experience in biomedical signal processing and interactive systems for healthcare have led to the development and deployment of systems for the collection and analysis of auscultation signals, echocardiography image processing for rheumatic fever screening, monitoring of stress and fatigue of firefighters in action, endoscopy signal analysis for cancer detection, computer assisted decision systems for capsule endoscopy, and quantification of 3d motion patterns for epilepsy, among others. Prof. Coimbra has more than 130 scientific publications, 25 of which in high-impact scientific journals (17 IEEE Transactions) and has attracted and managed more than 3M€ in research funding, over a total of 15 research projects acting as the PI of the project (10 projects) or co-PI of its Institution (5 projects).
Identificação

Identificação pessoal

Nome completo
Miguel Coimbra

Nomes de citação

  • Coimbra, Miguel

Identificadores de autor

Ciência ID
D01C-339E-4A5D
ORCID iD
0000-0001-7501-6523

Endereços de correio eletrónico

  • mcoimbra@fc.up.pt (Profissional)

Moradas

  • Faculdade de Ciências de Universidade do Porto. Rua do Campo Alegre, 4169-007, Porto, Porto, Portugal (Profissional)

Websites

Domínios de atuação

  • Ciências Exatas - Ciências da Computação e da Informação

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Inglês Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1)
Espanhol; Castelhano Utilizador proficiente (C1) Utilizador independente (B1) Utilizador elementar (A1) Utilizador proficiente (C1)
Francês Utilizador elementar (A1) Utilizador independente (B1) Utilizador elementar (A1) Utilizador elementar (A1)
Alemão Utilizador elementar (A1) Utilizador elementar (A1) Utilizador elementar (A1) Utilizador elementar (A1)
Formação
Grau Classificação
2004/09/01 - 2006/08/31
Concluído
Pós-Doutoramento em Engenharia Eletrotécnica (Pós-doutoramento)
Especialização em Visão Computacional
Universidade de Aveiro Instituto de Engenharia Eletrónica e Informática de Aveiro, Portugal
1999/09/01 - 2004/11/01
Concluído
Electronic Engineering (Doctor of Philosophy)
Especialização em Visão Computacional
Queen Mary, University of London, Reino Unido
n/a
1993/09/01 - 1998/07/31
Concluído
Engenharia Electrotécnica e de Computadores (Licenciatura)
Especialização em Telecomunicações
Universidade do Porto Faculdade de Engenharia, Portugal
16
Percurso profissional

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento
Empregador
2023/03/01 - Atual Professor Catedrático (Docente Universitário) Universidade do Porto Faculdade de Ciências, Portugal
Universidade do Porto Faculdade de Ciências, Portugal
2020/11/01 - 2023/02/28 Professor Associado (Docente Universitário) Universidade do Porto Faculdade de Ciências, Portugal
Universidade do Porto Faculdade de Ciências, Portugal
2016/09/01 - 2020/11/01 Professor Auxiliar (Docente Universitário) Universidade do Porto Faculdade de Ciências, Portugal
Universidade do Porto Faculdade de Ciências, Portugal
Projetos

Projeto

Designação Financiadores
2021/03/01 - 2024/03/01 THOR - Computer Assisted Thoracic Assessment using POCUS
DSAIPA/AI/0083/2020
Investigador responsável
Instituto de Engenharia de Sistemas e Computadores Tecnologia e Ciência, Portugal
Em curso
2021/03/01 - 2024/03/01 CAGED - Computer Assisted Gastric Cancer Diagnosis
PTDC/EEI-EEE/5557/2020
Investigador responsável
Instituto de Engenharia de Sistemas e Computadores Tecnologia e Ciência, Portugal
Em curso
2018/07/01 - 2021/06/30 Estetoscópio Digital para Uso Clínico
PTDC/CCI-COM/29200/2017
Instituto de Telecomunicações, Portugal

Universidade do Porto, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2014/04/21 - 2018/07/31 Hyrax: Crowd-Sourcing de Dispositivos Móveis para o Desenvolvimento de Edge-Clouds
CMUP-ERI/FIA/0048/2013
Instituto de Engenharia de Sistemas e Computadores, Portugal

Instituto de Telecomunicações, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2015/01/01 - 2015/12/31 BRIDGE - Análise de informação multimedia para descoberta de cancro em ambientes de gastrenterologia
CMUP-EPB/TIC/0069/2013
Instituto de Telecomunicações, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2013/07/01 - 2015/09/30 HeartSafe - Avaliação da função cardiaca por recurso a auscultação multi-canal para contextos de homecare
PTDC/EEI-PRO/2857/2012
Universidade de Coimbra, Portugal

Universidade de Coimbra Centro de Informatica e Sistemas, Portugal

Instituto de Telecomunicações, Portugal

Centro Hospitalar e Universitário de Coimbra EPE, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2011/02/01 - 2014/04/30 CAGE - Exame Gastrentereológico Assistido por Computador
PTDC/EIA-CCO/109982/2009
Instituto de Telecomunicações, Portugal

Universidade do Porto Faculdade de Medicina, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2010/02/01 - 2013/07/31 DigiScope - Estetoscópio Digital para Uso Clínico
PTDC/EIA-CCO/100844/2008
Instituto de Telecomunicações, Portugal

Instituto de Engenharia de Sistemas e Computadores, Portugal

Universidade do Porto Faculdade de Medicina, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2009/07/01 - 2012/12/31 Vital Responder: Monitorização de Stress em Profissionais de Emergência
CMU-PT/CPS/0046/2008
Universidade de Aveiro, Portugal

Instituto de Telecomunicações, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2007/12/15 - 2011/06/14 CapView - Ferramentas de apoio ao diagnóstico de exames de cápsula endoscópica
PTDC/EEA-ELC/72418/2006
Universidade de Aveiro, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2007/10/01 - 2010/12/31 MovEpil3D - quantificação de movimento tridimensional em epilepsia
PTDC/SAU-BEB/72305/2006
Universidade de Aveiro, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2007/09/01 - 2010/08/31 GERES-med: repositórios em GRID para aplicações médicas
GRID/GRI/81819/2006
Universidade de Aveiro, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal

Universidade do Porto Faculdade de Ciências, Portugal

Centro Hospitalar de Vila Nova de Gaia Espinho EPE, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
Produções

Publicações

Artigo em conferência
  1. Sofia Ferraz; Miguel Coimbra; João Pedrosa. "Deep Learning for Segmentation of the Left Ventricle in Echocardiography". 2023.
    10.1109/ENBENG58165.2023.10175322
  2. Nobrega, S; Neto, A; Coimbra, M; Cunha, A. "Gastric cancer detection based on Colorectal Cancer transfer learning". 2023.
    10.1109/enbeng58165.2023.10175323
  3. Nogueira, M; Oliveira, J; Ferreira, CG; Coimbra, MT; Jorge, AM. "Can Multi-channel Heart Sounds Analysis improve Murmur Detection?". 2022.
    10.1109/bhi56158.2022.9926792
  4. Oliveira, J; Nogueira, DM; Ferreira, CA; Jorge, AM; Coimbra, MT. "The robustness of Random Forest and Support Vector Machine Algorithms to a Faulty Heart Sound Segmentation". 2022.
    10.1109/embc48229.2022.9871111
  5. Lopes, I; Silva, A; Coimbra, MT; Ribeiro, MD; Libânio, D; Renna, F. "Supervised and semi-supervised training of deep convolutional neural networks for gastric landmark detection". 2022.
  6. Lima, G; Coimbra, MT; Ribeiro, MD; Libânio, D; Renna, F. "Analysis of classification tradeoff in deep learning for gastric cancer detection". 2022.
  7. Gaudio, A; Coimbra, MT; Campilho, A; Smailagic, A; Schmidt, SE; Renna, F. "Explainable Deep Learning for Non-Invasive Detection of Pulmonary Artery Hypertension from Heart Sounds". 2022.
    10.22489/cinc.2022.295
  8. Reyna, MA; Kiarashi, Y; Elola, A; Oliveira, J; Renna, F; Gu, A; Perez Alday, EA; et al. "Heart Murmur Detection from Phonocardiogram Recordings: The George B. Moody PhysioNet Challenge 2022". 2022.
    10.22489/cinc.2022.109
  9. Oliveira, J; Nogueira, DM; Renna, F; Ferreira, CA; Jorge, AM; Coimbra, MT. "Do we really need a segmentation step in heart sound classification algorithms?". 2021.
    10.1109/embc46164.2021.9630559
  10. Renna, F; Plumbley, MD; Coimbra, MT; Martins, N; Costa, E; Veiga, D; Ferreira, M; et al. "Source Separation of the Second Heart Sound via Alternating Optimization". 2021.
    10.23919/cinc53138.2021.9662814
  11. Faustino, P; Oliveira, J; Coimbra, MT. "Crackle and wheeze detection in lung sound signals using convolutional neural networks". 2021.
    10.1109/embc46164.2021.9630391
  12. Renna, F; Martins, ML; Coimbra, MT. "Joint Training of Hidden Markov Model and Neural Network for Heart Sound Segmentation". 2021.
    10.23919/cinc53138.2021.9662891
  13. Teixeira, PA; Sousa, PA; Coimbra, MT. "Computer Vision Challenges for Chronic Wounds Assessment". 2020.
  14. Reisinho, J; Coimbra, MT; Renna, F. "Deep Convolutional Neural Network Ensembles For Multi-Classification of Skin Lesions From Dermoscopic and Clinical Images". 2020.
    10.1109/embc44109.2020.9176411
  15. Silva, A; Santos, R; Silva, R; Coimbra, M. "Designing a Software for Qualitative and Quantitative Analysis of Oropharyngeal Swallowing by Videofluoroscopy". 2019.
    10.1109/enbeng.2019.8692497
  16. Pires, L; Coimbra, MT. "Rheumatic Fever Characterization Based on indicators extracted from Echocardiograms exams". 2019.
    10.1109/enbeng.2019.8692541
  17. Costa, E; Martins, N; Sultan, MS; Veiga, D; Ferreira, M; Mattos, S; Coimbra, M. "Mitral Valve Leaflets Segmentation in Echocardiography using Convolutional Neural Networks". 2019.
    10.1109/enbeng.2019.8692573
  18. Oliveira, J; Nogueira, DM; Ramos, C; Renna, F; Ferreira, CA; Coimbra, MT. "Using Soft Attention Mechanisms to Classify Heart Sounds". 2019.
    10.1109/embc.2019.8856748
  19. Moreira, T; Almeida, N; Bettencourt, N; Coimbra, M. "Quantification of the difference between Cardiac Magnetic Resonance signals in perfusion studies with and without motion correction algorithms". 2019.
    10.1109/enbeng.2019.8692487
  20. Renna, F; Illanes, A; Oliveira, J; Esmaeili, N; Friebe, M; Coimbra, MT. "Assessment of Sound Features for Needle Perforation Event Detection". 2019.
    10.1109/embc.2019.8857098
  21. Sultan, MS; Martins, N; Costa, E; Veiga, D; Ferreira, MJA; Mattos, S; Coimbra, MT. "Tracking Anterior Mitral Leaflet in Echocardiographic Videos Using Morphological Operators and Active Contours". 2018.
    10.1007/978-3-319-94806-5_9
  22. Freitas, T; Rodrigues, J; Bogas, D; Coimbra, M; Martins, R. "Panoptic, Privacy over Edge-Clouds". 2018.
    10.1109/ficloud.2018.00054
  23. Sultan, MS; Martins, N; Costa, E; Veiga, D; Ferreira, MJ; Silva Mattos, Sd; Coimbra, MT. "A New Method for the Anterior Mitral Leaflet Segmentation in Echocardiography Videos using the Virtual M-mode Space". 2018.
  24. Pires, L; Sultan, MS; Martins, N; Costa, E; Veiga, D; Ferreira, MJ; Silva Mattos, Sd; Coimbra, MT. "Extracting Thickness Profiles of Anterior Mitral Leaflets in Echocardiography Videos". 2018.
    10.1109/embc.2018.8512963
  25. Martins, N; Sultan, MS; Veiga, D; Ferreira, M; Coimbra, MT. "Fully Automatic Finger Extensor Tendon Segmentation in Ultrasound Images of the Metacarpophalangeal Joint". 2018.
    10.1109/embc.2018.8512969
  26. Renna, F; Oliveira, J; Coimbra, MT. "Convolutional Neural Networks for Heart Sound Segmentation". 2018.
    10.23919/eusipco.2018.8553120
  27. Renna, F; Oliveira, J; Coimbra, MT. "A Data-Driven Feature Extraction Method for Enhanced Phonocardiogram Segmentation". 2017.
    10.22489/cinc.2017.183-281
  28. Pinto, C; Pereira, D; Ferreira Coimbra, J; Portugues, J; Gama, V; Coimbra, M. "A Comparative Study of Electronic Stethoscopes for Cardiac Auscultation". 2017.
    10.1109/embc.2017.8037392
  29. Pérez, N; Faria, S; Coimbra, MT. "Understanding the Energy Saving Potential of Smart Scale Selection in the Viola and Jones Facial Detection Algorithm". 2017.
  30. Oliveira, J; Sousa, C; Coimbra, MT. "COUPLED HIDDEN MARKOV MODEL FOR AUTOMATIC ECG AND PCG SEGMENTATION". 2017.
    10.1109/icassp.2017.7952311
  31. Sultan, MS; Martins, N; Costa, E; Veiga, D; Ferreira, MJ; Mattos, S; Coimbra, MT. "Real-time Anterior Mitral Leaflet Tracking using Morphological Operators and Active Contours". 2017.
    10.5220/0006244700390046
  32. Costa, E; Martins, N; Sultan, MS; Veiga, D; Ferreira, MJ; Mattos, S; Coimbra, M. "A Preliminary Approach for the Segmentation of Mitral Valve Regurgitation Jet in Doppler Ecocardiography Images". 2017.
    10.5220/0006248900470054
  33. Sultan, MS; Martins, N; Costa, E; Veiga, D; Ferreira, MJ; Mattos, S; Coimbra, MT. "Tracking Large Anterior Mitral Leaflet Displacements by Incorporating Optical Flow in an Active Contours Framework". 2017.
    10.1109/embc.2017.8037548
  34. Oliveira, J; Mantadelis, T; Renna, F; Gomes, P; Coimbra, M. "On modifying the temporal modeling of HSMMs for pediatric heart sound segmentation". 2017.
    10.1109/sips.2017.8110004
  35. Sultan, MS; Martins, N; Veiga, D; Ferreira, MJ; Coimbra, MT. "Tracking of the Anterior Mitral Leaflet in Echocardiographic Sequences using Active Contours". 2016.
    10.1109/EMBC.2016.7590889
  36. Oliveira, J; Mantadelis, T; Coimbra, M. "Why should you model time when you use Markov Models for heart sound analysis". 2016.
    10.1109/EMBC.2016.7591470
  37. Pereira, D; Gomes, P; Faria, S; Cruz Correia, R; Coimbra, M; Ferreira, MJ; Cruz Correia, RJ; Coimbra, MT. "Teaching Cardiopulmonary Auscultation in Workshops using a Virtual Patient Simulation Technology - A Pilot Study". 2016.
    10.1109/EMBC.2016.7591365
  38. Gomes, P; Faria, S; Coimbra, M. "The Effect of Data Exchange Protocols on Decision Support Systems for Heart Sounds". 2016.
    10.1109/EMBC.2016.7591944
  39. Soares, E; Oliveira, C; Maia, J; Almeida, R; Coimbra, M; Brandao, P; Prior, R. "Modular Health Kiosk for Health Self-Assessment". 2016.
    10.1109/ISCC.2016.7543754
  40. Martins, N; Sultan, MS; Veiga, D; Ferreira, M; Coimbra, M. "Segmentation of the metacarpus and phalange in musculoskeletal ultrasound images using local active contours". 2016.
    10.1109/EMBC.2016.7591627
  41. Riaz, F; Hassan, A; Pimentel Nunes, P; Libnio e Jorge Lage, DLEJ; Coimbra, MT. "How Well Can The Fusion of Gabor Filters And Local Binary Patterns Help In Identifying Gastric Lesions?". 2016.
    10.1109/EMBC.2016.7590921
  42. Abrantes, D; Gomes, P; Pereira, D; Coimbra, M. "Measuring the intuitive response of users when faced with different interactive paradigms to control a gastroenterology CAD system". 2016.
    10.1109/EMBC.2016.7591998
  43. Castro, A; Gomes, P; Mattos, SS; Coimbra, MT. "Comparison Between Users of a New Methodology for Heart Sound Auscultation". 2016.
    10.1109/EMBC.2016.7591945
  44. Oliveira, J; Cardoso, B; Coimbra, MT. "Exploratory Study of the Cardiac Dynamic Trajectory in the Embedding Space". 2016.
  45. Sultan, MalikSaad; Martins, Nelson; Veiga, Diana; Ferreira, Manuel; Coimbra, MiguelTavares. "Automatic Segmentation of Extensor Tendon of the MCP Joint in Ultrasound Images". 2016.
    10.5220/0005692500710076
  46. Oliveira, JH; Ferreira, V; Coimbra, MT. "Can We Find Deterministic Signatures in ECG and PCG Signals?". 2015.
    10.5220/0005205201840189
  47. Sultan, MS; Martins, N; Ferreira, MJ; Coimbra, MT. "Segmentation of Bones & MCP Joint Region of the Hand from Ultrasound Images". 2015.
    10.1109/embc.2015.7319023
  48. Abrantes, D; Pimentel Nunes, P; Dinis Ribeiro, M; Coimbra, M. "Identifying technology interaction opportunities within a gastroenterology exam room". 2015.
    10.3233/978-1-61499-512-8-652
  49. Mantadelis, T; Oliveira, J; Coimbra, M. "Most probable explanation for MetaProbLog and its application in heart sound segmentation". 2015.
  50. Gomes, P; Frade, S; Castro, A; Cruz Correia, R; Coimbra, M. "A proposal to incorporate digital auscultation and its processing into an existing electronic health record". 2015.
    10.5220/0005222901430150
  51. Castro, A; Moukadem, A; Schmidt, S; Dieterlen, A; Coimbra, MT. "Analysis of the electromechanical activity of the heart from synchronized ECG and PCG signals of subjects under stress". 2015.
    10.5220/0005202400490056
  52. Oliveira, J; Oliveira, C; Cardoso, B; Sultan, MS; Coimbra, MT. "A multi-spot exploration of the topological structures of the reconstructed phase-space for the detection of cardiac murmurs". 2015.
    10.1109/embc.2015.7319319
  53. Sousa, R; Da Rocha Neto, AR; Barreto, GA; Cardoso, JS; Coimbra, MT. "Reject option paradigm for the reduction of support vectors". 2014.
  54. Sousa, R; Moura, DC; Dinis Ribeiro, M; Coimbra, MT. "Local Self Similar Descriptors: Comparison and Application to Gastroenterology Images". 2014.
    10.1109/embc.2014.6944657
  55. Castro, A; Mattos, SS; Coimbra, MT. "Noninvasive Blood Pressure and the Second Heart Sound Analysis". 2014.
    10.1109/embc.2014.6944870
  56. Oliveira, J; Castro, A; Coimbra, M. "Exploring Embedding Matrices and the Entropy Gradient for the Segmentation of Heart Sounds in Real Noisy Environments". 2014.
    10.1109/embc.2014.6944314
  57. Riaz, F; Hassan, A; Javed, MY; Coimbra, MT. "Detecting melanoma in dermoscopy images using scale adaptive local binary patterns". 2014.
    10.1109/embc.2014.6945179
  58. Riaz, F.; Ribeiro, M.-D.; Pimentel-Nunes, P.; Coimbra, M.T.. "Integral scale histogram local binary patterns for classification of narrow-band gastroenterology images". 2013.
    10.1109/embc.2013.6610350
  59. Gomes, P.; Kaiseler, M.; Lopes, B.; Faria, S.; Queiros, C.; Coimbra, M.. "Are standard heart rate variability measures associated with the self-perception of stress of firefighters in action?". 2013.
    10.1109/embc.2013.6610065
  60. Castro, A.; Vinhoza, T.T.V.; Mattos, S.S.; Coimbra, M.T.. "Heart sound segmentation of pediatric auscultations using wavelet analysis". 2013.
    10.1109/EMBC.2013.6610399
  61. Ramos, J.P.; Carvalho, P.; Coimbra, M.. "Towards a time-feature independent phonocardiogram segmentation". 2013.
    10.1109/EMBC.2013.6609951
  62. Sousa, R.; Ribeiro, M.-D.; Pimentel-Nunes, P.; Coimbra, M.T.. "Impact of SVM multiclass decomposition rules for recognition of cancer in gastroenterology images". 2013.
  63. Riaz, F.; Nunes, P.-P.; Ribeiro, M.-D.; Coimbra, M.T.. "Segmentation of gastroenterology images: A comparison between clustering and fitting models approaches". 2013.
    10.1109/CBMS.2013.6627872
  64. Castro, A.; Amorim, P.; Coimbra, M.T.. "Cardiovascular variability and nociception/anti-nociception balance during anesthesia". 2013.
    10.1109/CBMS.2013.6627796
  65. Ferreira, P; Vinhoza, TTV; Castro, A; Mourato, F; Tavares, T; Mattos, S; Dutra, I; et al. "Knowledge on Heart Condition of Children based on Demographic and Physiological Features". 2013.
    10.1109/cbms.2013.6627808
  66. Sousa, R; Ribeiro, MD; Pimentel Nunes, P; Coimbra, MT. "Impact of SVM Multiclass Decomposition Rules for Recognition of Cancer in Gastroenterology Images". 2013.
    10.1109/cbms.2013.6627827
  67. Gomes, E.F.; Bentley, P.J.; Coimbra, M.; Pereira, E.; Deng, Y.. "Classifying heart sounds: Approaches to the PASCAL challenge". 2013.
  68. Riaz, F.; Ribeiro, M.D.; Pimentel-Nunes, P.; Coimbra, M.T.. "A DFT based rotation and scale invariant Gabor texture descriptor and its application to gastroenterology". 2013.
    10.1109/icip.2013.6738296
  69. Marques, N.; Almeida, R.; Rocha, A.P.; Coimbra, M.. "Exploring the Stationary Wavelet Transform detail coefficients for detection and identification of the S1 and S2 heart sounds". 2013.
  70. Gomes, P.; Lopes, B.; Coimbra, M.. "Vital analysis: Field validation of a framework for annotating biological signals of first responders in action". 2012.
    10.1109/EMBC.2012.6346381
  71. Gomes, P.; Kaiseler, M.; Queiros, C.; Oliveira, M.; Lopes, B.; Coimbra, M.. "Vital Analysis: Annotating sensed physiological signals with the stress levels of first responders in action". 2012.
    10.1109/embc.2012.6347530
  72. Ferreira, P.; Pereira, D.; Mourato, F.; Mattos, S.; Cruz-Correia, R.; Coimbra, M.; Dutra, I.. "Detecting cardiac pathologies from annotated auscultations". 2012.
    10.1109/CBMS.2012.6266358
  73. Ye, C.; Kumar, B.V.K.V.; Coimbra, M.T.. "Combining general multi-class and specific two-class classifiers for improved customized ECG heartbeat classification". 2012.
  74. Hedayioglu, F.L.; Jafari, M.G.; Mattos, S.S.; Plumbley, M.D.; Coimbra, M.T.. "Separating sources from sequentially acquired mixtures of heart signals". 2011.
    10.1109/icassp.2011.5946488
  75. Ye, C.; Pallauf, J.; Kumar, B.V.K.V.; Coimbra, M.T.; Kumar, B.V.. "Customizing the training dataset to an individual for improved heartbeat recognition performance in long-term ECG signals". 2011.
    10.1109/IEMBS.2011.6090901
  76. Riaz, F.; Areia, M.; Silva, F.B.; Dinis-Ribeiro, M.; Nunes, P.P.; Coimbra, M.. "Gabor textons for classification of gastroenterology images". 2011.
    10.1109/isbi.2011.5872368
  77. Ye, C.; Kumar, B.V.K.V.; Coimbra, M.T.. "Human identification based on ECG signals from wearable health monitoring devices". 2011.
    10.1145/2093698.2093723
  78. Jafari, M.G.; Hedayioglu, F.L.; Coimbra, M.T.; Plumbley, M.D.. "Blind source separation of periodic sources from sequentially recorded instantaneous mixtures". 2011.
  79. Ye, C.; Coimbra, M.T.; Vijaya Kumar, B.V.K.. "Arrhythmia detection and classification using morphological and dynamic features of ECG signals". 2010.
    10.1109/IEMBS.2010.5627645
  80. Ye, C.; Coimbra, M.T.; Kumar, B.V.K.V.. "Investigation of human identification using two-lead Electrocardiogram (ECG) signals". 2010.
    10.1109/BTAS.2010.5634478
  81. Coimbra, M.; Riaz, F.; Areia, M.; Baldaque Silva, F.; Dinis-Ribeiro, M.. "Segmentation for classification of gastroenterology images". 2010.
    10.1109/IEMBS.2010.5626622
  82. Coimbra, M; Riaz, F; Areia, M; Baldaque Silva, FB; Dinis Ribeiro, M. "Segmentation for Classification of Gastroenterology Images". 2010.
    10.1109/iembs.2010.5626622
  83. Hedayioglu, FD; Coimbra, MT; Mattos, SD; De Lima, F.H.; Coimbra, M.T.; Da Silva, S.. "A SURVEY OF AUDIO PROCESSING ALGORITHMS FOR DIGITAL STETHOSCOPES". 2009.
  84. Riaz, F.; Dinis-Ribeiro, M.; Coimbra, M.. "Semantic relevance of current image segmentation algorithms". 2009.
    10.1109/WIAMIS.2009.5031458
  85. Sousa, A.; Dinis-Ribeiro, M.; Areia, M.; Coimbra, M.. "Identifying cancer regions in vital-stained magnification endoscopy images using adapted color histograms". 2009.
    10.1109/ICIP.2009.5414082
  86. Lima, S.; Silva Cunha, J.P.; Coimbra, M.; Soares, J.M.. "ECCA - Endoscopic Capsule Capview cAtaloguer". 2009.
    10.1007/978-3-642-03904-1-63
  87. Lima, S.; Cunh~a, J.P.; Coimbra, M.; Soares, J.M.. "A tool for endoscopic capsule dataset preparation for clinical video event detector algorithms". 2009.
  88. Riaz, F; Ribeiro, MD; Coimbra, MT. "QUANTITATIVE COMPARISON OF SEGMENTATION METHODS FOR IN-BODY IMAGES". 2009.
    10.1109/iembs.2009.5332540
  89. Riaz, F.; Ribeiro, M.D.; Coimbra, M.T.. "Quantitative comparison of segmentation methods for in-body images". 2009.
    10.1109/IEMBS.2009.5332540
  90. Sousa, A.; Dinis-Ribeiro, M.; Areia, M.; Correia, M.; Coimbra, M.. "Towards more adequate colour histograms for in-body images". 2008.
    10.1109/iembs.2008.4649630
  91. Sousa, A; Dinis Ribeiro, M; Areia, M; Correia, M; Coimbra, M. "Towards more adequate colour histograms for in-body images". 2008.
    10.1109/iembs.2008.4649630
  92. Coimbra, M.; Kustra, J.; Campos, P.; Silva Cunha, J.P.. "Combining color with spatial and temporal position of the endoscopic capsule for improved topographic classification and segmentation". 2006.
  93. Coimbra, M.; Campos, P.; Silva Cunha, J.P.. "Topographic segmentation and transit time estimation for endoscopic capsule exams". 2006.
    10.1109/ICASSP.2006.1660555
  94. Coimbra, M.; Campos, P.; Cunha, J.P.S.. "Extracting clinical information from endoscopic capsule exams using MPEG-7 visual descriptors". 2005.
    10.1049/ic.2005.0718
  95. Coimbra, M.; Davies, M.. "Segmentation of moving pedestrians within the compressed domain". 2004.
    10.1109/ICASSP.2004.1326617
Artigo em revista
  1. Miguel L. Martins; Miguel T. Coimbra; Francesco Renna. "Markov-Based Neural Networks for Heart Sound Segmentation: Using Domain Knowledge in a Principled Way". IEEE Journal of Biomedical and Health Informatics (2023): https://doi.org/10.1109/JBHI.2023.3312597.
    10.1109/JBHI.2023.3312597
  2. Jorge Oliveira; Margarida Carvalho; Diogo Nogueira; Miguel Coimbra. "The selection of an optimal segmentation region in physiological signals". International Transactions in Operational Research (2023): https://doi.org/10.1111/itor.13138.
    10.1111/itor.13138
  3. Alan Carlos de Moura Lima; Lisle Faray de Paiva; Geraldo Bráz; João Dallyson S. de Almeida; Aristófanes Corréa Silva; Miguel Tavares Coimbra; Anselmo Cardoso de Paiva. "A Two-Stage Method for Polyp Detection in Colonoscopy Images Based on Saliency Object Extraction and Transformers". IEEE Access (2023): https://doi.org/10.1109/ACCESS.2023.3297097.
    10.1109/ACCESS.2023.3297097
  4. Francesco Renna; Miguel Martins; Alexandre Neto; António Cunha; Diogo Libânio; Mário Dinis-Ribeiro; Miguel Coimbra. "Artificial Intelligence for Upper Gastrointestinal Endoscopy: A Roadmap from Technology Development to Clinical Practice". Diagnostics 12 5 (2022): 1278-1278. https://doi.org/10.3390/diagnostics12051278.
    10.3390/diagnostics12051278
  5. Elola, A; Aramendi, E; Oliveira, J; Renna, F; Coimbra, MT; Reyna, MA; Sameni, R; Clifford, GD; Rad, AB. "Beyond Heart Murmur Detection: Automatic Murmur Grading from Phonocardiogram". CoRR (2022):
    10.1109/jbhi.2023.3275039
  6. Oliveira J.H.; Renna F.; Costa P.; Nogueira D.; Oliveira C.; Ferreira C.; Jorge A.; et al. "The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification". IEEE Journal of Biomedical and Health Informatics (2021):
    10.1109/jbhi.2021.3137048
  7. Arribas, J; Antonelli, G; Frazzoni, L; Fuccio, L; Ebigbo, A; van der Sommen, F; Ghatwary, N; et al. "Standalone performance of artificial intelligence for upper GI neoplasia: a meta-analysis". GUT (2021):
    10.1136/gutjnl-2020-321922
  8. Martins, M; Gomes, P; Oliveira, C; Coimbra, M; da Silva, HP; Monica Martins; Pedro Gomes; et al. "Design and Evaluation of a Diaphragm for Electrocardiography in Electronic Stethoscopes". IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING 67 2 (2020): 391-398. https://doi.org/10.1109/TBME.2019.2913913.
    10.1109/tbme.2019.2913913
  9. Farhan Riaz; Saad Rehman; Muhammad Ajmal; Rehan Hafiz; Ali Hassan; Naif Radi Aljohani; Raheel Nawaz; et al. "Gaussian Mixture Model Based Probabilistic Modeling of Images for Medical Image Segmentation". IEEE Access 8 (2020): 16846-16856. https://doi.org/10.1109/ACCESS.2020.2967676.
    10.1109/ACCESS.2020.2967676
  10. Pires, IM; Marques, G; Garcia, NM; Florez Revuelta, F; Canavarro Teixeira, M; Zdravevski, E; Spinsante, S; Coimbra, M. "Pattern Recognition Techniques for the Identification of Activities of Daily Living Using a Mobile Device Accelerometer". ELECTRONICS (2020):
    10.3390/electronics9030509
  11. Jorge Oliveira; Francesco Renna; Miguel Coimbra; Oliveira, J; Renna, F; Coimbra, M. "A Subject-Driven Unsupervised Hidden Semi-Markov Model and Gaussian Mixture Model for Heart Sound Segmentation". IEEE Journal of Selected Topics in Signal Processing 13 2 (2019): 323-331. https://doi.org/10.1109/JSTSP.2019.2908723.
    10.1109/JSTSP.2019.2908723
  12. Malik Saad Sultan; Nelson Martins; Eva Costa; Diana Veiga; Manuel Joao Ferreira; Sandra Mattos; Miguel Tavares Coimbra; et al. "Virtual M-Mode for Echocardiography: A New Approach for the Segmentation of the Anterior Mitral Leaflet". IEEE Journal of Biomedical and Health Informatics 23 1 (2019): 305-313. https://doi.org/10.1109/JBHI.2018.2799738.
    10.1109/JBHI.2018.2799738
  13. Renna, F; Oliveira, J; Coimbra, MT; Francesco Renna; Jorge Oliveira; Miguel T. Coimbra; Theofrastos Mantadelis; et al. "Deep Convolutional Neural Networks for Heart Sound Segmentation". IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS 23 2 (2019): 642-649. https://doi.org/10.1109/JBHI.2018.2841197.
    10.1109/jbhi.2019.2894222
  14. Riaz, F; Naeem, S; Nawaz, R; Coimbra, M; Farhan Riaz; Sidra Naeem; Raheel Nawaz; Miguel Coimbra. "Active Contours Based Segmentation and Lesion Periphery Analysis for Characterization of Skin Lesions in Dermoscopy Images". IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS 23 2 (2019): 489-500. https://doi.org/10.1109/JBHI.2018.2832455.
    10.1109/jbhi.2018.2832455
  15. Martins, N; Sultan, S; Veiga, D; Ferreira, M; Teixeira, F; Coimbra, M; Nelson Martins; et al. "A New Active Contours Approach for Finger Extensor Tendon Segmentation in Ultrasound Images Using Prior Knowledge and Phase Symmetry". IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS 22 4 (2018): 1261-1268. https://doi.org/10.1109/JBHI.2017.2723819.
    10.1109/jbhi.2017.2723819
  16. Ana Cristina Oliveira; Sandra Mattos; Miguel Coimbra; Ana Cristina Antunes de Oliveira. "Development and Assessment of an E-learning Course on Pediatric Cardiology Basics". JMIR Medical Education 3 1 (2017): e10-e10. https://doi.org/10.2196/mededu.5434.
    10.2196/mededu.5434
  17. Riaz, F; Hassan, A; Nisar, R; Dinis Ribeiro, M; Coimbra, MT; Farhan Riaz; Ali Hassan; et al. "Content-Adaptive Region-Based Color Texture Descriptors for Medical Images". IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS 21 1 (2017): 162-171. https://www.authenticus.pt/P-00M-E2J.
    10.1109/jbhi.2015.2492464
  18. Ye, C; Kumar, BVKV; Coimbra, MT. "An Automatic Subject-Adaptable Heartbeat Classifier Based on Multiview Learning". IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS (2016):
    10.1109/jbhi.2015.2468224
  19. Pimentel Nunes, P; Libanio, D; Lage, J; Abrantes, D; Coimbra, M; Esposito, G; Hormozdi, D; et al. "A multicenter prospective study of the real-time use of narrow-band imaging in the diagnosis of premalignant gastric conditions and lesions". ENDOSCOPY (2016): https://www.authenticus.pt/P-00K-VYS.
    10.1055/s-0042-108435
  20. Neves, J.C.; Castro, H.; Tomás, A.; Coimbra, M.; Proença, H.. "Detection and separation of overlapping cells based on contour concavity for Leishmania images". Cytometry Part A 85 6 (2014): 491-500. http://www.scopus.com/inward/record.url?eid=2-s2.0-84901445264&partnerID=MN8TOARS.
    10.1002/cyto.a.22465
  21. Baldaque-Silva, F.; Marques, M.; Lunet, N.; Themudo, G.; Goda, K.; Toth, E.; Soares, J.; et al. "Endoscopic assessment and grading of Barrett's esophagus using magnification endoscopy and narrow band imaging: Impact of structured learning and experience on the accuracy of the Amsterdam classification system". Scandinavian Journal of Gastroenterology 48 2 (2013): 160-167. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872698010&partnerID=MN8TOARS.
    10.3109/00365521.2012.746392
  22. Riaz, F.; Silva, F.B.; Ribeiro, M.D.; Coimbra, M.T.. "Impact of visual features on the segmentation of gastroenterology images using normalized Cuts". IEEE Transactions on Biomedical Engineering 60 5 (2013): 1191-1201. http://www.scopus.com/inward/record.url?eid=2-s2.0-84876751444&partnerID=MN8TOARS.
    10.1109/TBME.2012.2230174
  23. Riaz, F.; Silva, F.B.; Ribeiro, M.D.; Coimbra, M.T.. "Invariant Gabor texture descriptors for classification of gastroenterology images". IEEE Transactions on Biomedical Engineering 59 10 (2012): 2893-2904. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866558005&partnerID=MN8TOARS.
    10.1109/TBME.2012.2212440
  24. Ye, C.; Vijaya Kumar, B.V.K.; Coimbra, M.T.. "Heartbeat classification using morphological and dynamic features of ECG signals". IEEE Transactions on Biomedical Engineering 59 10 (2012): 2930-2941. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866562436&partnerID=MN8TOARS.
    10.1109/TBME.2012.2213253
  25. Pallauf, J.; Gomes, P.; Brás, S.; Cunha, J.P.; Coimbra, M.; Cunha, J.P.S.. "Associating ECG features with firefighter's activities.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011 (2011): 6009-6012. http://www.scopus.com/inward/record.url?eid=2-s2.0-84862291992&partnerID=MN8TOARS.
    10.1109/IEMBS.2011.6091485
  26. Marques, N.; Dias, E.; Cunha, J.P.; Coimbra, M.; Cunha, J.P.S.. "Compressed domain topographic classification for capsule endoscopy.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011 (2011): 6631-6634. http://www.scopus.com/inward/record.url?eid=2-s2.0-84864602729&partnerID=MN8TOARS.
    10.1109/iembs.2011.6091635
  27. Pereira, D.; Hedayioglu, F.; Correia, R.; Silva, T.; Dutra, I.; Almeida, F.; Mattos, S.S.; Coimbra, M.. "DigiScope--unobtrusive collection and annotating of auscultations in real hospital environments.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011 (2011): 1193-1196. http://www.scopus.com/inward/record.url?eid=2-s2.0-84861944926&partnerID=MN8TOARS.
    10.1109/IEMBS.2011.6090280
  28. Ye, C.; Coimbra, M.T.; Vijaya Kumar, B.K.. "Arrhythmia detection and classification using morphological and dynamic features of ECG signals.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 1918-1921. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903863301&partnerID=MN8TOARS.
  29. Coimbra, M.; Riaz, F.; Areia, M.; Baldaque Silva, F.; Dinis-Ribeiro, M.. "Segmentation for classification of gastroenterology images.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 4744-4747. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903857201&partnerID=MN8TOARS.
  30. Riaz, F.; Ribeiro, M.D.; Coimbra, M.T.. "Quantitative comparison of segmentation methods for in-body images.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2009): 5785-5788. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903872292&partnerID=MN8TOARS.
  31. Sousa, A.; Dinis-Ribeiro, M.; Areia, M.; Correia, M.; Coimbra, M.. "Towards more adequate colour histograms for in-body images.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 2193-2196. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903867690&partnerID=MN8TOARS.
  32. Cunha, J.P.S.; Coimbra, M.; Campos, P.; Soares, J.M.. "Automated topographic segmentation and transit time estimation in endoscopic capsule exams". IEEE Transactions on Medical Imaging 27 1 (2008): 19-27. http://www.scopus.com/inward/record.url?eid=2-s2.0-37549002033&partnerID=MN8TOARS.
    10.1109/TMI.2007.901430
  33. Coimbra, M.T.; Cunha, J.P.S.. "MPEG-7 visual descriptors - Contributions for automated feature extraction in capsule endoscopy". IEEE Transactions on Circuits and Systems for Video Technology 16 5 (2006): 628-636. http://www.scopus.com/inward/record.url?eid=2-s2.0-33646399427&partnerID=MN8TOARS.
    10.1109/tcsvt.2006.873158
  34. Miguel Coimbra; M. Davies; Coimbra, M.T.; Davies, M.. "Approximating optical flow within the MPEG-2 compressed domain". IEEE Trans. on Circuits and Systems for Video Tech. 15 1 (2005): 103-107. http://www.it.pt/Publications/PaperJournal/2289.
    10.1109/TCSVT.2004.837016
Capítulo de livro
  1. Rúben Baeza; Carolina Santos; Fábio Nunes; Jennifer Mancio; Ricardo Fontes-Carvalho; Miguel Coimbra; Francesco Renna; João Pedrosa. "A Generalization Study of Automatic Pericardial Segmentation in Computed Tomography Images". 2023.
    10.1007/978-3-031-32029-3_15
Livro
  1. Neves, J.C.; Castro, H.; Proença, H.; Coimbra, M.. Automatic annotation of Leishmania infections in fluorescence microscopy images. 2013.
    10.1007/978-3-642-39094-4_70
  2. Pereira, D.; Gomes, P.; Mota, É.; Costa, E.; Cruz-Correia, R.; Coimbra, M.. Combining a Tablet and an Electronic Stethoscope to Create a New Interaction Paradigm for Teaching Cardiac Auscultation. 2013.
    10.1007/978-3-642-39476-8_43
  3. Coimbra, M.; Silva Cunha, J.P.. Vital responder - Wearable sensing challenges in uncontrolled critical environments. 2012.
    10.1007/978-3-642-32778-0_4
  4. Riaz, F.; Vilarino, F.; Ribeiro, M.D.; Coimbra, M.. Identifying potentially cancerous tissues in chromoendoscopy images. 2011.
    10.1007/978-3-642-21257-4_88

Outros

Outra produção
  1. Assisted probe guidance in cardiac ultrasound: A review. 2023. Ferraz, S; Coimbra, M; Pedrosa, J.
    10.3389/fcvm.2023.1056055
  2. Identifying the determinants and understanding their effect on the perception of safety, security, and comfort by pedestrians and cyclists: A systematic review. 2022. Ferreira, MC; Costa, PD; Abrantes, D; Hora, J; Felicio, S; Coimbra, M; Dias, TG.
    10.1016/j.trf.2022.10.004
  3. Segmentation and Optimal Region Selection of Physiological Signals using Deep Neural Networks and Combinatorial Optimization. 2020. Oliveira, J; Carvalho, M; Nogueira, DM; Coimbra, MT.
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2020/03/25 Ministrou 62 palestras numa variedade de eventos e instituições, para plateias tão distintas como alunos, investigadores, indústria e público em geral, ilustrando a sua capacidade de comunicar ciência com rigor científico e pedagógico muito variado. Destacam-se com naturalidade as palestras resultantes de convites internacionais em instituições de grande prestígio tais como o MIT, Carnegie Mellon, e Cambridge. Seguem-se outras palestras internacionais no Reino Unido, França, Brasil e Alemanha.

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2020/03/25 - Atual Orientador de 13 estudantes de Doutoramento (7 já concluídos)
Orientador
2020/03/25 - Atual Orientador de 48 estudantes de Mestrado (48 já concluídos)
Orientador
2020/03/25 - Atual Orientador de 8 investigadores de Pós-Doutoramento (7 já concluídos)
Orientador

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2020/03/25 Participou em 19 Júris Académicos de Doutoramento fora da sua instituição, e 6 dentro desta. Vários candidatos (Doutoramento)
2020/03/25 Participou em 50 Júris Académicos de Mestrado fora da sua instituição, e 3 dentro desta. Vários candidatos (Mestrado)

Arbitragem científica em conferência

Nome da conferência Local da conferência
2020/03/25 - 2020/03/25 Integração em 79 Technical Program Committees de conferências nacionais e internacionais
Distinções

Prémio

2021 Best poster presentation award at the Computing in Cardiology 2021 conference.
2021 Best oral presentation award at RECPAD 2021

Título

2021 Agregação
Universidade do Porto Faculdade de Ciências, Portugal

Outra distinção

2017 Prémio Most Investable Company
2017 Prémio de Inovação Pedagógica
Universidade do Porto, Portugal
2016 Prémio Pfizer de Investigação Clínica 2016
2015 Best paper award