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Identificação

Identificação pessoal

Nome completo
Daniel Simões Lopes

Identificadores de autor

Ciência ID
951C-935C-2D29
ORCID iD
0000-0003-0917-9396
Formação
Grau Classificação
2013
Concluído
 Engenharia Computacional (Doutoramento)
Universidade de Lisboa Instituto Superior Técnico, Portugal
"Smooth convex surfaces for modeling and simulating multibody systems with compliant contact elements" (TESE/DISSERTAÇÃO)
 Pass with merit
2006
Concluído
 Licenciatura em Engenharia Biomédica (pré-Bolonha) (Licenciatura)
Universidade de Lisboa Instituto Superior Técnico, Portugal
"Geometric Modeling of Human Structures Based on CT Data - a Software Pipeline" (TESE/DISSERTAÇÃO)
 15
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento 		Empregador
2014/09/01 - Atual Investigador (Investigação) Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
2014/09/01 - 2018/08/31 Investigador (Investigação) Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
2013/12/14 - 2014/02/07 Investigador (Investigação) Inria Centre de recherche Lille Nord Europe, França
2008/05/01 - 2013/11/30 Investigador (Investigação) Instituto de Engenharia Mecânica, Portugal
2007/02/01 - 2008/04/30 Investigador (Investigação) Universidade de Lisboa Instituto de Investigação e Inovação em Engenharia Civil para a Sustentabilidade, Portugal

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento 		Empregador
2018/09/01 - Atual Professor Auxiliar (Docente Universitário) Universidade de Lisboa Instituto Superior Técnico Campus Taguspark, Portugal
Projetos

Bolsa

Designação Financiadores
2014/04 - 2018/08 FCT Post-Doctoral Fellowship
SFRH/BPD/97449/2013
Bolseiro de Pós-Doutoramento
Fundação para a Ciência e Tecnologia
2009 - 2012 UT Austin | Portugal Program Doctoral Scholarship
SFRH/BD/47750/2008
 Fundação para a Ciência e Tecnologia

Projeto

Designação Financiadores
2018/10/01 - 2022/09/30 Melhorar Cuidados em Centros de Reabilitação via Ambientes Sensíveis ao Contexto
PTDC/CCI-COM/30274/2017
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Instituto de Engenharia Mecânica, Portugal

Egas Moniz Cooperativa de Ensino Superior CRL, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2018/10/01 - 2020/03/31 Captura Melhorada do Movimento Humano Recorrendo a Dados Cinemáticos Anatomicamente Corrigidos - Aplicações em Exergames e Reabilitação
UTAP-EXPL/CA/0065/2017
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Instituto de Engenharia Mecânica, Portugal

Hospital Professor Doutor Fernando Fonseca EPE, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2016/06/01 - 2019/02/28 Tablets Interactivos para Exploração de Imagens Médicas 3D em Ambiente Colaborativo
PTDC/EEI-SII/6038/2014
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Hospital Professor Doutor Fernando Fonseca EPE, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2015/07/01 - 2016/06/30 Algoritmos para Detecção de Cavidades em MacroMoleculas
UTAP-EXPL/QEQ-COM/0019/2014
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Instituto de Telecomunicações, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2013/09/01 - 2016/05/31 Simulacros Digitais: Modelando a 3a Dimensão
PTDC/EEI-SII/3154/2012
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Universidade de Lisboa Faculdade de Arquitectura, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2009/01/01 - 2012/12/31 DACHOR - Dinâmica Multicorpo e Controlo de Ortóteses Híbridas Activas
MIT-Pt/BS-HHMS/0042/2008
Universidade de Lisboa Instituto Superior Técnico, Portugal

Instituto de Engenharia Mecânica, Portugal

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
Produções

Publicações

Artigo em conferência
  1. "Exploring and Selecting Supershapes in Virtual Reality with Line, Quad, and Cube Shaped Widgets". 2022.
    10.1109/VR51125.2022.00019
  2. "Empathic AuRea: Exploring the Effects of an Augmented Reality Cue for Emotional Sharing Across Three Face-to-Face Task". 2022.
    10.1109/VR51125.2022.00034
  3. "Exploring Bi-Directional Pinpointing Techniques for Cross-Reality Collaboration". 2021.
    10.1109/vrw52623.2021.00055
  4. Lopes, Daniel Simões. "FEETICHE: FEET Input for ContactlessHand gEsture Interaction". 2019.
    10.1145/3359997.3365704
  5. Lopes, Daniel Simões. "Negative Space: Workspace Awareness in 3D Face-to-Face Remote Collaboration". 2019.
    10.1145/3359997.3365744
  6. Lopes, Daniel Simões. "Interaction Techniques for Immersive CT Colonography: A Professional Assessment". 2018.
    10.1007/978-3-030-00934-2_70
  7. Lopes, Daniel. "VRRRRoom: Virtual Reality for Radiologists in the Reading Room". 2017.
    10.1145/3025453.3025566
Artigo em revista
  1. "Controlling camera movement in VR colonography". Virtual Reality (2022): https://link.springer.com/article/10.1007/s10055-021-00620-4.
    10.1007/s10055-021-00620-4
  2. Daniel da Silva; Cátia Botelho Costa; Nuno André da Silva; Isabel Ventura; Francisca Pais Leite; Daniel Simões Lopes. "Augmenting the training space of an epidural needle insertion simulator with HoloLens". Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization (2021): https://doi.org/10.1080/21681163.2021.2012833.
    10.1080/21681163.2021.2012833
  3. Ivo F. Roupa; Sérgio B. Gonçalves; Miguel Tavares da Silva; Richard R. Neptune; Daniel Simões Lopes. "Motion envelopes: unfolding longitudinal rotation data from walking stick-figures". Computer Methods in Biomechanics and Biomedical Engineering (2021): https://doi.org/10.1080/10255842.2021.2016722.
    10.1080/10255842.2021.2016722
  4. Pedro F. Gouveia; Joana Costa; Pedro Morgado; Ronald Kates; David Pinto; Carlos Mavioso; João Anacleto; et al. "Breast cancer surgery with augmented reality". The Breast (2021): https://doi.org/10.1016/j.breast.2021.01.004.
    10.1016/j.breast.2021.01.004
  5. Lopes, Daniel Simões. "An immersive educational tool for dental implant placement: A study on user acceptance". International Journal of Medical Informatics 146 (2021): 104342-104342. http://www.sciencedirect.com/science/article/pii/S1386505620306705.
    https://doi.org/10.1016/j.ijmedinf.2020.104342
  6. Tomás Alves; Henrique Carvalho; Daniel Simões Lopes. "Winning compensations: Adaptable gaming approach for upper limb rehabilitation sessions based on compensatory movements". Journal of Biomedical Informatics 108 (2020): 103501-103501. https://doi.org/10.1016/j.jbi.2020.103501.
    10.1016/j.jbi.2020.103501
  7. Helena Catarina Margarido Mendes; Cátia Isabel Andrade Botelho Costa; Nuno André da Silva; Francisca Pais Leite; Augusto Esteves; Daniel Simões Lopes. "PIÑATA: Pinpoint Insertion of intravenous Needles via Augmented reality Training Assistance". Computerized Medical Imaging and Graphics (2020): https://doi.org/10.1016/j.compmedimag.2020.101731.
    10.1016/j.compmedimag.2020.101731
  8. Daniel Simões Lopes; Sara M. Pires; Carolina D. Barata; Vasco V. Mascarenhas; Joaquim A. Jorge. "The hip joint as an egg shape: a comprehensive study of femoral and acetabular morphologies". Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization (2020): https://doi.org/10.1080/21681163.2019.1709902.
    10.1080/21681163.2019.1709902
  9. Lopes, Daniel Simões. "Laparoscopy with augmented reality adaptations". Journal of Biomedical Informatics (2020): https://www.sciencedirect.com/science/article/pii/S1532046420300915?via%3Dihub.
    10.1016/j.jbi.2020.103463
  10. Lopes, Daniel Simões. "Anatomy Studio: a Tool for Virtual Dissection Through Augmented 3D Reconstruction". Computers & Graphics (2019):
    10.1016/j.cag.2019.09.006
  11. Lopes, Daniel Simões. "Touchless interaction with medical images based on 3D hand cursors supported by single-foot input: A case study in dentistry". Journal of Biomedical Informatics (2019):
    10.1016/j.jbi.2019.103316
  12. Lopes, Daniel Simões. "Usability studies on building early stage architectural models in virtual reality". Automation in Construction 103 (2019): 104-116. http://www.sciencedirect.com/science/article/pii/S0926580517311378.
    10.1016/j.autcon.2019.03.009
  13. Daniel Simões Lopes; Pedro F. Parreira; Ana R. Mendes; Vasco M. Pires; Soraia F. Paulo; Carlos Sousa; Joaquim A. Jorge. "Explicit design of transfer functions for volume-rendered images by combining histograms, thumbnails, and sketch-based interaction". The Visual Computer (2018): https://doi.org/10.1007/s00371-017-1448-8.
    10.1007/s00371-017-1448-8
  14. Daniel S. Lopes; Rafael K. dos Anjos; Joaquim A. Jorge. "Assessing the usability of tile-based interfaces to visually navigate 3-D parameter domains". International Journal of Human-Computer Studies 118 (2018): 1-13. https://doi.org/10.1016/j.ijhcs.2018.05.005.
    10.1016/j.ijhcs.2018.05.005
  15. Carlo Massaroni; Daniel Simões Lopes; Daniela Lo Presti; Emiliano Schena; Sergio Silvestri. "Contactless Monitoring of Breathing Patterns and Respiratory Rate at the Pit of the Neck: A Single Camera Approach". Journal of Sensors (2018): https://doi.org/10.1155/2018/4567213.
    10.1155/2018/4567213
  16. Daniel Simões Lopes; Sara M. Pires; Vasco V. Mascarenhas; Miguel T. Silva; Joaquim A. Jorge. "On a “Columbus’ Egg”: Modeling the shape of asymptomatic, dysplastic and impinged hip joints". Medical Engineering & Physics 59 (2018): 50-55. https://doi.org/10.1016/j.medengphy.2018.07.001.
    10.1016/j.medengphy.2018.07.001
  17. Lopes, Daniel. "Demo Hour". interactions 24 6 (2017): 8-11. http://doi.acm.org/10.1145/3143318.
    10.1145/3143318
  18. Lopes, Daniel Simões. "On the utility of 3D hand cursors to explore medical volume datasets with a touchless interface". Journal of Biomedical Informatics (2017):
    10.1016/j.jbi.2017.07.009
  19. Lopes, Daniel Simões. "Stroke-based splatting: an efficient multi-resolution point cloud visualization technique". The Visual Computer (2017):
    10.1007/s00371-017-1420-7
  20. Lopes, Daniel. "A benchmark study on accuracy-controlled distance calculation between superellipsoid and superovoid contact geometries". Mechanism and Machine Theory 115 (2017): 77-96. http://www.sciencedirect.com/science/article/pii/S0094114X17301799.
    https://doi.org/10.1016/j.mechmachtheory.2017.04.008
  21. Lopes, Daniel Simões. "Geometric detection algorithms for cavities on protein surfaces in molecular graphics: a survey". Computer Graphics Forum (2017):
    10.1111/cgf.13158
  22. Lopes, Daniel Simões. "Expeditious illustration of layer-cake models on and above a tactile surface". Computers & Geosciences (2016): http://www.sciencedirect.com/science/article/pii/S0098300416300334.
    10.1016/j.cageo.2016.02.009
  23. de Ara\'ujo, B. R.; Lopes, Daniel S.; Jepp, Pauline; Jorge, Joaquim A.; Wyvill, Brian. "A Survey on Implicit Surface Polygonization". ACM Computing Surveys 47 4 (2015): 60:1-60:39. http://doi.acm.org/10.1145/2732197.
    10.1145/2732197
  24. Lopes, Daniel. "Shape Analysis of the Femoral Head: A Comparative Study between Spherical, (Super)Ellipsoidal and (Super)Ovoidal Shapes". Journal of Biomechanical Engineering (2015): http://biomechanical.asmedigitalcollection.asme.org/article.aspx?articleid=2446481&resultClick=3.
    10.1115/1.4031650
  25. Lopes, Daniel. "A Superellipsoid-Plane Model for Simulating Foot-Ground Contact during Human Gait". Computer Methods in Biomechanics and Biomedical Engineering (2015):
    10.1080/10255842.2015.1081181
  26. Lopes, Daniel. "Finite element simulations of a hip joint with femoroacetabular impingement". Computer Methods in Biomechanics and Biomedical Engineering (2014): http://europepmc.org/abstract/med/23211051.
    10.1080/10255842.2012.744398
  27. D.S. Lopes; M.T. Silva; J.A. Ambr\'osio. "Tangent vectors to a 3-D surface normal: A geometric tool to find orthogonal vectors based on the Householder transformation". Computer-Aided Design 45 3 (2013): 683-694. http://www.sciencedirect.com/science/article/pii/S0010448512002734.
    http://dx.doi.org/10.1016/j.cad.2012.11.003
  28. Lopes, Daniel. "A finite element model to simulate femoral fractures in calves: testing different polymers for intramedullary interlocking nails.". Veterinary Surgery (2012): http://europepmc.org/abstract/med/22913748.
    10.1111/j.1532-950X.2012.01032.x
  29. Lopes, Daniel. "Finite element studies of the mechanical behaviour of the diaphragm in normal and pathological cases". Computer Methods in Biomechanics and Biomedical Engineering (2011): http://europepmc.org/abstract/med/21082461.
    21082461
  30. Lopes, Daniel Simões. "A mathematical framework for rigid contact detection between quadric and superquadric surfaces". Multibody System Dynamics 24 3 (2010): 255-280. http://link.springer.com/article/10.1007/s11044-010-9220-0.
    10.1007/s11044-010-9220-0
  31. Lopes, Daniel. "Bone remodelling analysis of a bovine femur for a veterinary implant design". Computer Methods in Biomechanics and Biomedical Engineering (2009): http://europepmc.org/abstract/med/19358056.
    10.1080/10255840902865641
Artigo em revista (magazine)
  1. Lopes, Daniel Simões. "Medical interfaces of the future", 2017, https://www.ingentaconnect.com/content/sil/impact/2017/00002017/00000010/art00027;jsessionid=mtf12xvnl4fa.x-ic-live-02.
    10.21820/23987073.2017.10.76
Capítulo de livro
  1. "From Anatomical to Digital Dissection: A Historical Perspective Since Antiquity Towards the Twenty-First Century". 11-39. Springer International Publishing, 2021.
    10.1007/978-3-030-61905-3_2
  2. "A Tool for Collaborative Anatomical Dissection". 41-58. Springer International Publishing, 2021.
    10.1007/978-3-030-61905-3_3
  3. "3D Reconstruction from CT Images Using Free Software Tools". 135-157. Springer International Publishing, 2021.
    10.1007/978-3-030-61905-3_8
Livro
  1. Digital Anatomy. Springer International Publishing. 2021.
    10.1007/978-3-030-61905-3
Poster em conferência
  1. "From A-Pose to AR-Pose: Animating Characters in Mobile AR". 2021.
    10.1145/3450415.3464401
  2. "To Splat Straight with Crooked Points: Rendering Noisy Meshes and Point Clouds using Coherent Tangent Vector Fields". 2021.
    10.2312/EGP.20211028
  3. Lopes, Daniel Simões. "Improving Camera Travel for Immersive Colonography". 2020.
    10.1109/VRW50115.2020.00225
  4. Lopes, Daniel Simões. "Visual Biofeedback for Upper Limb Compensatory Movements: A Preliminary Study Next to Rehabilitation Professionals". 2019.
    10.2312/eurp.20191139
Resumo em conferência
  1. Lopes, Daniel Simões. "Challenges and Approaches to Interactive Visualization in Healthcare Workspaces". 2017.
    10.1080/07853890.2018.1560057
  2. Lopes, Daniel Simões. "Extending medical interfaces towards virtual reality and augmented reality". 2017.
    10.1080/07853890.2018.1560068
Atividades

Orientação

Título / Tema
Papel desempenhado 		Curso (Tipo)
Instituição / Organização
2017 - 2017 Measurement of imperceptible breathing movements from Kinect Skeleton Data
Coorientador
 Engenharia Electrotécnica e de Computadores (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2017 - 2017 CAVE COLON – Cave-like Virtual Reality Environments for CT Colonography
Coorientador
 Engenharia Biomédica (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016 - 2016 Precise Extraction of Anatomical Segment Orientations from the Kinect One Sensor
Coorientador
 Engenharia Biomédica (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2015 - 2015 Efficient Contact Detection for Game Engines and Robotics: A non-polygonal approach with smooth convex objects
Coorientador
 Engenharia Electrotécnica e de Computadores (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Arbitragem científica em conferência

Nome da conferência Local da conferência
2022/11/27 - 2022/11/30 21th International Conference on Mobile and Ubiquitous Multimedia Lisboa, Portugal
2022/06/22 - 2022/06/24 ACM Interactive Media Experiences 2022 Aveiro, Portugal
Distinções

Prémio

2018 Best INESC-ID Junior Researcher Prize 2018
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Outra distinção

2022 World Cancer Day article collection
Elsevier BV, Países Baixos
2018 Editors' Choice - Medical Engineering & Physics
2018 MICCAI Educational Challenge 2018 (finalist)
MICCAI, Estados Unidos
2017 Nominee for the Best INESC-ID Junior Researcher Prize 2017
2016 Nominee for the Best INESC-ID Junior Researcher Prize 2016
2014 OpenSim - 2014 Advanced User Workshop
2013 CIME Grant to participate in the CIME course on IsoGeometric Analysis: a New Paradigm in the Numerical Approximation of PDEs, CIME-EMS Summer School in Applied Mathematics, Cetraro, Italy, June 18 to June 22, 2012, CIME Foundation.
2013 2012 OpenSim Developer's Week Travel Award, Stanford University, California, July 16 to July 20, 2012, NIH National Center for Simulation in Rehabilitation Research.
2013 Fraunhofer Portugal Challenge 2013 (finalist)
2010 Carlos Lima Award (honorable mention)
Sociedade Portuguesa de Ortopedia e Traumatologia, Portugal