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I am an evolutionary biologist fascinated by understanding adaptation and speciation, and in particular, the role played by chromosomal rearrangements (CRs) in these evolutionary processes. Since my PhD (completed in 2007), I have been studying this topic in multiple systems at various institutions (CIBIO, Portugal; Institute of Evolutionary Biology, Spain; and School of Biosciences of U. Sheffield, UK). Particularly, the work I developed within the framework of a Marie Curie fellowship (2016-2018) about the role of inversions in adaptation and speciation in Littorina opened many new avenues of research with significant findings for the field of evolutionary biology. After my return to CIBIO-BIOPOLIS in 2019, I have been working independently as Associate Researcher (CEEC-FCT) in EVOLGEN studying these evolutionary processes across different study systems with emphasis in marine organisms and in particular snail's species of the genus Littorina. The last 5 years have been the most prolific of my career in terms of publication and impact. Until today, I published a total of 68 scientific works, most in the scope of this proposal: 5 book chapters, 2 special issues (as guest editor) and 61 manuscripts in international peer-reviewed journals, including Mol Ecol (6), Trends Genet (3), Trends Ecol Evol (3), Mol Biol Evol (1), Evol Lett (3), Evolution (1), Science Advances (1) and Nature (1); and I have 6 additional manuscripts currently submitted. This resulted in a h-index of 23 and ~3180 citations, with an increasing trend in number of publications and citations. I am first or last author in nearly half of these publications, highlighting my scientific independence. I have been successful in granting my own research funding, including three fellowships (1 PhD and 2 postdocs by FCT), a Marie Curie IF fellowship, as well as a CEEC contract (Auxiliary Researcher) also funded FCT (total of ~600k euros). I was awarded 3 main research grants as PI (2 in Portugal and 1 in Germany; ~500k euros) and 3 as co-PI (in Portugal, Germany and UK; ~300k euros), besides other smaller projects (1 by EEA grants, 4 by ASSEMBLE and 1 by DAAD-FCT), as well as funding for the organization of conferences and courses (>66k euros). Moreover, I am a key partner in six other research projects that are currently ongoing at CIBIO, Spain (U. Vigo) and in France (U. Montpellier and Roscoff- U. Sorbonne). I acquired experience teaching Biology undergraduate students and in a MSc program at the U. of Porto, in an international course in Bioinformatics (U. Leipzig and Free U. Berlin), and in an international PhD program at the U. of Cabo Verde. I am currently Invited Assistant Professor at the Faculty of Sciences of the U. of Porto. I serve as Associate editor in Heredity since 2019 and I have been reviewing manuscripts for many scientific journals (including PNAS, Nat Com, Nat Ecol Evol, Trends Ecol Evol, etc.); and research projects for several research funding agencies including EU-ERC starting grants. I have a vast experience in supervision, currently leading a team composed by 2 postdocs, 2 PhD students and 2 technicians. I presented my work in many relevant conferences, courses and seminars in the field (>50 posters and in >30 communications, several as invited speaker). I organized several international and national conferences, and created and co-organized an internationally successful summer course on programming for evolutionary. I was one of the main organizers of regular weekly seminars at CIBIO and at the U. Sheffield; I organized one of the biannual Littorina meetings and I manage a google groups of "Littorina" researchers, I serve as vice-president of the Portuguese Association for Evolutionary Biology and I participated in different outreach initiatives. Altogether, I reached a career stage where I am prepared to lead a research group, which will help me to attain a tenured research position.
Identificação

Identificação pessoal

Nome completo
Rui Miguel Macieira de Faria

Nomes de citação

  • Faria, Rui

Identificadores de autor

Ciência ID
751B-511D-D47A
ORCID iD
0000-0001-6635-685X
Google Scholar ID
https://scholar.google.com/citations?user=ubDybpQAAAAJ

Endereços de correio eletrónico

  • r.macieiradefaria@sheffield.ac.uk (Profissional)
  • rui.faria@upf.edu (Profissional)
  • ruifaria@cibio.up.pt (Profissional)
  • rui.faria@fc.up.pt (Profissional)

Telefones

Telemóvel
  • 962549264 (Pessoal)

Moradas

  • Campus Agrário de Vairão, Rua Padre Armando Quintas N7, 4485-661, Vairão, Vila do Conde, Portugal (Profissional)
  • Rua do Clube dos Dragoes Valboenses, N79, 3 dto, 4420-617, Valbom, Gondomar, Portugal (Pessoal)

Websites

Domínios de atuação

  • Ciências Naturais - Ciências Biológicas - Biologia da Evolução das Espécies

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Português (Idioma materno)
Inglês Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2)
Espanhol; Castelhano Utilizador independente (B1) Utilizador independente (B2) Utilizador elementar (A1) Utilizador independente (B2) Utilizador elementar (A1)
Francês Utilizador elementar (A1) Utilizador independente (B1) Utilizador elementar (A1) Utilizador elementar (A1) Utilizador elementar (A1)
Formação
Grau Classificação
2007
Concluído
Biology (Doutoramento)
Universidade do Porto Faculdade de Ciências, Portugal
"Study of evolutionary processes and phylogeography in European species of the genus Alosa, based on molecular markers" (TESE/DISSERTAÇÃO)
Approved (only 2 possibilities: approved / failed)
1999
Concluído
Biology (Licenciatura)
Universidade do Porto Faculdade de Ciências, Portugal
"Graduation thesis on Brown trout population genetic using allozymes and microsatellites (Internship thesis report)" (TESE/DISSERTAÇÃO)
17 (max 20) after internship - 1st percentile (of the science-technology branch)
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento
Empregador
2019/05/01 - Atual Investigador (Investigação) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2018/09/01 - Atual Investigador visitante (Investigação) The University of Sheffield, Reino Unido
2018/10/15 - 2023/08 Investigador visitante (Investigação) Centro Interdisciplinar de Investigação Marinha e Ambiental da Madeira, Portugal
2016/09/01 - 2018/08/31 Investigador (Investigação) The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2013/08/01 - 2016/08/31 Pós-doutorado (Investigação) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013/08/01 - 2016/08/31 Pós-doutorado (Investigação) Instituto de Biología Evolutiva, Espanha
2007/08/01 - 2013/07/31 Pós-doutorado (Investigação) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Instituto de Biología Evolutiva, Espanha
(...)
2007/08/01 - 2013/07/31 Pós-doutorado (Investigação) Instituto de Biología Evolutiva, Espanha
2001 - 2007 Estagiário de Investigação (Investigação) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
1999 - 2001 Assistente de Investigação (carreira) (Investigação) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento
Empregador
2024 - 2024 Professor Auxiliar Convidado (Docente Universitário) Universidade do Porto Faculdade de Ciências, Portugal
2005 - 2005 Professor Auxiliar Convidado (Docente Universitário) Universidade do Porto Faculdade de Ciências, Portugal
Projetos

Bolsa

Designação Financiadores
2022/04/01 - Atual The roles of chromosomal inversions in polymorphism, adaptation and speciation
96513
Investigador
Leverhulme Trust
Em curso
2022/01/15 - Atual The role of chromosomal inversions in adaptation and reproductive isolation across the speciation continuum- INVcontinuum
PTDC/BIA-EVL/1614/2021
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Governo da República Portuguesa Ministério da Ciência Tecnologia e Ensino Superior
2023 - 2026 Biotic interactions in a changing world - how marine foundation species determine biodiversity across environmental gradients
2022.02887.PTDC
Investigador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2023 - 2024 Ancient GEnomics of Speciation and hybridisation
2022.07766.PTDC
Co-Investigador Responsável (Co-IR)
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2023 - 2024 Evolution on our heads: disentangling mechanisms of diversification in human lice
2022.03867.PTDC
Investigador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2021 - 2023 EEA grant project "Technical Cooperation for Studying Adaptation to Environmental Change - Adaptchange".
FBR_OC1_68
Investigador responsável
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
EEA Grants
Concluído
2019 - 2022 The contribution of inversion polymorphism to local adaptation and speciation.
2018-03695
Investigador
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido

Göteborgs Universitet, Suécia
Vetenskapsradet
Concluído
2016 - 2021 The evolution of barriers to gene exchange
ERC_2015_AdG_693030 'BARRIERS'
Investigador
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
European Commission
Em curso
2016 - 2021 Speciation: genital divergence and the evolution of reproductive isolation
2015-05001
Investigador
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
Vetenskapsradet
Em curso
2016 - 2020 Causes and consequences of mating preferences evolution in wild populations
CGL2016-75482-P
Investigador
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Gobierno de España Ministerio de Economía y Empresa
Em curso
2016/09 - 2018/10 Chromosomal rearrangements and diversification on environmental gradients (Marie Curie fellowship)
706376
Bolseiro de Investigação
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
Horizon 2020
Concluído
2013 - 2018 Accelerated evolution in chromosomal rearrangements and speciation in lacertid lizards (Co-PI)
iDiv
Outra
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
German Centre for Integrative Biodiversity Research
Concluído
2014 - 2016 Genomic architecture of speciation: the role of chromosomal rearrangements
85685-1
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
VolkswagenStiftung
Concluído
2013 - 2016 THE GENOMIC ARCHITECTURE OF SPECIATION: INSIGHTS FROM SIMULATIONS AND EMPIRICAL DATA ON FLAT PERIWINKLES (postdoc project)
SFRH/BPD/89313/2012
Bolseiro de Pós-Doutoramento
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2010/04/01 - 2014/01/31 Gamete Recognition Proteins: the key for cryptic sexual selection?
Investigador Pós-doutorado
Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2012 - 2014 Genomic distribution of nucleotide and gene expression divergence in mammals: the role of chromosomal rearrangements in speciation
Portugal-Germany (DAAD-FCT) bilateral cooperation
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia

Deutscher Akademischer Austauschdienst
Concluído
2011 - 2014 The paths of parallel evolution and their genetic crossroads
PTDC/BIA-EVF/113805/2009
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2010 - 2014 The Atlantic Aquatic Resource Conservation Project
AARC – http://aarcproject.org/
Investigador
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
European Commission
Concluído
2010/03/01 - 2013/08/31 Mouse sex ratio distortion
PTDC/BIA-BEC/103440/2008
Investigador Pós-doutorado
Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2007 - 2013 The role of chromosomal rearrangements in adaptation and speciation (FCT postdoc project)
SFRH/BPD/26384/2006
Bolseiro de Pós-Doutoramento
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2002 - 2005 Analysis of micro and macroevolutionary processes in European species of the Alosa genus
POCTI/BSE/41527/2001
Bolseiro de Doutoramento
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
1999 - 2001 Phylogenetic and ecological approach for prioritising areas for conservation and management of Portuguese Brown Trout (Salmo trutta L.) populations
PRAXIS XXI/P/BIA/10245/1998
Bolseiro de Técnico de Investigação
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluído

Projeto

Designação Financiadores
2021 - 2027 INVironment - The role of chromosomal rearrangements in adaptation to environmental changes (Research Contract without research funding)
2020.00275.CEECIND
Investigador
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2021/01/01 - 2025/12/31 Research Network in Biodiversity and Evolutionary Biology (InBIO)
LA/P/0048/2020
Investigador
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2020/01/01 - 2023/12/31 Research Network in Biodiversity and Evolutionary Biology
UIDB/50027/2020
Investigador
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2020/01/01 - 2023/12/31 Research Network in Biodiversity and Evolutionary Biology
UIDP/50027/2020
Investigador
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluído

Outro

Designação Financiadores
2021 - 2021 BISBAYLITGAP -Detecting gene flow between French and Spanish populations of Littorina species: filling the Biscay Bay gap. (Assemble Plus)
n. 13460.2
Investigador responsável
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Concluído
2020/02/01 - 2020/05/31 The genetic and evolutionary basis of colour polymorphism in Littorina fabalis - GEBCOL (Assemble Plus)
ECM-018
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
European Marine Biological Resource Centre
Em curso
2014 - 2014 OBTUSALIS - Genetic differentiation and hybridization between flat periwinkles in Swedish shores (Assemble)
grant agreement no. 227799
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
ASSOCIATION OF EUROPEAN MARINE BIOLOGICAL LABORATORIES.
Concluído
2012 - 2012 Study of genetic and ecological mechanisms involved in the formation of Littorina fabalis ecotypes in Sweden (Assemble)
Grant agreement No. 227799
Investigador responsável
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
ASSOCIATION OF EUROPEAN MARINE BIOLOGICAL LABORATORIES.
Concluído
2008 - 2011 Orang-utan genome sequencing consortium
Investigador
Instituto de Biología Evolutiva, Espanha
Concluído
2002 - 2004 Genetic characterization of Alosa populations from the United Kingdom
Bolseiro de Doutoramento
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Concluído
Produções

Publicações

Artigo em conferência
  1. Santos, NP; Faria, Rui; Carrola, J; Torres-Castro, L; Fontaínhas-Fernandes, A; Cortes, R; ALEXANDRINO, P.. "Avaliação Genética da Eficácia de Repovoamentos com Truta (Salmo trutta)- Resultados Preliminares". Trabalho apresentado em XII Congresso de Zootecnia, 2002.
    Publicado
Artigo em revista
  1. Johannesson, Kerstin; Faria, Rui; Le Moan, Alan; Rafajlovic, Marina; Westram, Anja Marie; Butlin, Roger K.; Stankowski, Sean. "Diverse pathways to speciation revealed by marine snails". Trends in Genetics (2024): http://dx.doi.org/10.1016/j.tig.2024.01.002.
    10.1016/j.tig.2024.01.002
  2. da Fonseca, Rute R.; Campos, Paula F.; Rey-Iglesia, Alba; Barroso, Gustavo V.; Bergeron, Lucie A.; Nande, Manuel; Tuya, Fernando; et al. "Population Genomics Reveals the Underlying Structure of the Small Pelagic European Sardine and Suggests Low Connectivity within Macaronesia". Genes 15 2 (2024): 170. http://dx.doi.org/10.3390/genes15020170.
    10.3390/genes15020170
  3. Berdan, Emma L.; Aubier, Thomas G.; Cozzolino, Salvatore; Faria, Rui; Feder, Jeffrey L.; Giménez, Mabel D.; Joron, Mathieu; Searle, Jeremy B.; Mérot, Claire. "Structural Variants and Speciation: Multiple Processes at Play". Cold Spring Harbor Perspectives in Biology (2023): a041446. http://dx.doi.org/10.1101/cshperspect.a041446.
    10.1101/cshperspect.a041446
  4. Berdan, Emma L.; Barton, Nicholas H.; Butlin, Roger; Charlesworth, Brian; Faria, Rui; Fragata, Inês; Gilbert, Kimberly J.; et al. "How chromosomal inversions reorient the evolutionary process". Journal of Evolutionary Biology 36 12 (2023): 1761-1782. http://dx.doi.org/10.1111/jeb.14242.
    10.1111/jeb.14242
  5. James Reeve; Roger K. Butlin; Eva L. Koch; Sean Stankowski; Rui Faria. "Chromosomal inversion polymorphisms are widespread across the species ranges of rough periwinkles (Littorina saxatilis and L. arcana)". Molecular Ecology (2023): https://doi.org/10.1111/mec.17160.
    10.1111/mec.17160
  6. João Carvalho; Hernán E. Morales; Rui Faria; Roger K. Butlin; Vítor C. Sousa. "Integrating Pool-seq uncertainties into demographic inference". Molecular Ecology Resources (2023): https://doi.org/10.1111/1755-0998.13834.
    10.1111/1755-0998.13834
  7. João Carvalho; Rui Faria; Roger K. Butlin; Vitor C. Sousa. "poolHelper: An R package to help in designing Pool-Seq studies". Methods in Ecology and Evolution (2023): https://doi.org/10.1111/2041-210X.14185.
    10.1111/2041-210X.14185
  8. Lucek, Kay; Giménez, Mabel D.; Joron, Mathieu; Rafajlovic, Marina; Searle, Jeremy B.; Walden, Nora; Westram, Anja Marie; Faria, Rui. "The Impact of Chromosomal Rearrangements in Speciation: From Micro- to Macroevolution". Cold Spring Harbor Perspectives in Biology 15 11 (2023): a041447. http://dx.doi.org/10.1101/cshperspect.a041447.
    10.1101/cshperspect.a041447
  9. Theissinger, Kathrin; Fernandes, Carlos; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; et al. "How genomics can help biodiversity conservation". Trends in Genetics 39 7 (2023): 545-559. http://dx.doi.org/10.1016/j.tig.2023.01.005.
    10.1016/j.tig.2023.01.005
  10. Alan Le Moan; Marina Panova; Aurélien De Jode; Olga Ortega-Martinez; Mårten Duvetorp; Rui Faria; Roger Butlin; Kerstin Johannesson. "An allozyme polymorphism is associated with a large chromosomal inversion in the marine snail Littorina fabalis". Evolutionary Applications (2023): https://doi.org/10.1111/eva.13427.
    10.1111/eva.13427
  11. Stankowski, Sean; Zagrodzka, Zuzanna B; Galindo, Juan; Montaño-Rendón, Mauricio; Faria, Rui; Mikhailova, Natalia; Blakeslee, April M H; et al. "Whole-genome phylogeography of the intertidal snail Littorina saxatilis". Evolutionary Journal of the Linnean Society 2 1 (2023): http://dx.doi.org/10.1093/evolinnean/kzad002.
    10.1093/evolinnean/kzad002
  12. Hearn, Katherine E.; Koch, Eva L.; Stankowski, Sean; Butlin, Roger K.; Faria, Rui; Johannesson, Kerstin; Westram, Anja M.. "Differing associations between sex determination and sex-linked inversions in two ecotypes of Littorina saxatilis". Evolution Letters 6 5 (2022): 358-374. http://dx.doi.org/10.1002/evl3.295.
    10.1002/evl3.295
  13. De Jode, Aurélien; Le Moan, Alan; Johannesson, Kerstin; Faria, Rui; Stankowski, Sean; Westram, Anja Marie; Butlin, Roger K.; Rafajlovic, Marina; Fraïsse, Christelle. "Ten years of demographic modelling of divergence and speciation in the sea". Evolutionary Applications 16 2 (2022): 542-559. http://dx.doi.org/10.1111/eva.13428.
    10.1111/eva.13428
  14. Westram, Anja M.; Faria, Rui; Johannesson, Kerstin; Butlin, Roger; Barton, Nick. "Inversions and parallel evolution". Philosophical Transactions of the Royal Society B: Biological Sciences 377 1856 (2022): http://dx.doi.org/10.1098/rstb.2021.0203.
    10.1098/rstb.2021.0203
  15. Formenti, Giulio; Theissinger, Kathrin; Fernandes, Carlos; Bista, Iliana; Bombarely, Aureliano; Bleidorn, Christoph; Ciofi, Claudio; et al. "The era of reference genomes in conservation genomics (as member of the European Reference Genome Atlas (ERGA) Consortium)". Trends in Ecology & Evolution 37 3 (2022): 197-202. http://dx.doi.org/10.1016/j.tree.2021.11.008.
    10.1016/j.tree.2021.11.008
  16. Sabatino, Stephen J.; Faria, Rui; Alexandrino, Paulo B.. "Genetic structure, diversity, and connectivity in anadromous and freshwater Alosa alosa and A. fallax". Marine Biology 169 1 (2021): http://dx.doi.org/10.1007/s00227-021-03970-4.
    10.1007/s00227-021-03970-4
  17. Marina Rafajlovic; Jordi Rambla; Jeffrey L. Feder; Arcadi Navarro; Rui Faria. "Inversions and genomic differentiation after secondary contact: When drift contributes to maintenance, not loss, of differentiation". Evolution 75 6 (2021): 1288-1303. https://doi.org/10.1111/evo.14223.
    10.1111/evo.14223
  18. Koch, Eva L.; Morales, Hernán E.; Larsson, Jenny; Westram, Anja M.; Faria, Rui; Lemmon, Alan R.; Lemmon, E. Moriarty; Johannesson, Kerstin; Butlin, Roger K.. "Genetic variation for adaptive traits is associated with polymorphic inversions inLittorina saxatilis". Evolution Letters 5 3 (2021): 196-213. http://dx.doi.org/10.1002/evl3.227.
    10.1002/evl3.227
  19. Kolora, Sree Rohit Raj; Gysi, Deisy Morselli; Schaffer, Stefan; Grimm-Seyfarth, Annegret; Szabolcs, Márton; Faria, Rui; Henle, Klaus; et al. "Accelerated Evolution of Tissue-Specific Genes Mediates Divergence Amidst Gene Flow in European Green Lizards". Genome Biology and Evolution 13 8 (2021): http://dx.doi.org/10.1093/gbe/evab109.
    10.1093/gbe/evab109
  20. Westram, Anja M.; Faria, Rui; Johannesson, Kerstin; Butlin, Roger. "Using replicate hybrid zones to understand the genomic basis of adaptive divergence". Molecular Ecology (2021): http://dx.doi.org/10.1111/mec.15861.
    Acesso aberto • Publicado • 10.1111/mec.15861
  21. Faria, Rui; Johannesson, Kerstin; Stankowski, Sean. "Speciation in marine environments: Diving under the surface". Journal of Evolutionary Biology 34 1 (2021): 4-15. http://dx.doi.org/10.1111/jeb.13756.
    Acesso aberto • 10.1111/jeb.13756
  22. Estévez, Daniel; Kozminsky, Eugene; Carvajal-Rodríguez, Antonio; Caballero, Armando; Faria, Rui; Galindo, Juan; Rolán-Alvarez, Emilio. "Mate Choice Contributes to the Maintenance of Shell Color Polymorphism in a Marine Snail via Frequency-Dependent Sexual Selection". Frontiers in Marine Science 7 (2020): http://dx.doi.org/10.3389/fmars.2020.614237.
    10.3389/fmars.2020.614237
  23. Graciela Sotelo; Mårten Duvetorp; Diana Costa; Marina Panova; Kerstin Johannesson; Rui Faria. "Phylogeographic history of flat periwinkles, Littorina fabalis and L. obtusata". BMC Evolutionary Biology (2020): https://doi.org/10.1186/s12862-019-1561-6.
    Acesso aberto • Publicado • 10.1186/s12862-019-1561-6
  24. Galindo, Juan; Carvalho, João; Sotelo, Graciela; Duvetorp, Mårten; Costa, Diana; Kemppainen, Petri; Panova, Marina; et al. "Genetic and morphological divergence between Littorina fabalis ecotypes in Northern Europe". Journal of Evolutionary Biology 34 1 (2020): 97-113. http://dx.doi.org/10.1111/jeb.13705.
    10.1111/jeb.13705
  25. Moutinho, Ana Filipa; Serén, Nina; Paupério, Joana; Silva, Teresa Luísa; Martínez-Freiría, Fernando; Sotelo, Graciela; Faria, Rui; et al. "Evolutionary history of two cryptic species of northern African jerboas". BMC Evolutionary Biology 20 1 (2020): http://dx.doi.org/10.1186/s12862-020-1592-z.
    10.1186/s12862-020-1592-z
  26. Diana Costa; Graciela Sotelo; Antigoni Kaliontzopoulou; João Carvalho; Roger Butlin; Johan Hollander; Rui Faria. "Hybridization patterns between two marine snails, Littorina fabalis and L. obtusata". Ecology and Evolution 10 (2020): 1158-1179. https://doi.org/10.1002/ece3.5943.
    Acesso aberto • Publicado • 10.1002/ece3.5943
  27. Marques JP; Graciela Sotelo; Galindo, Juan; Chaube, Pragya; Costa, Diana; Afonso, Sandra; Panova, Marina; et al. "Transcriptomic resources for evolutionary studies in flat periwinkles and related species.". Scientific Data (2020):
    No prelo
  28. Johannesson, Kerstin; Zagrodzka, Zuzanna; Faria, Rui; Marie Westram, Anja; Butlin, Roger K.. "Is embryo abortion a post-zygotic barrier to gene flow between Littorina ecotypes?". Journal of Evolutionary Biology 33 3 (2019): 342-351. http://dx.doi.org/10.1111/jeb.13570.
    10.1111/jeb.13570
  29. Hernán E. Morales; Rui Faria; Kerstin Johannesson; Tomas Larsson; Marina Panova; Anja M. Westram; Roger K. Butlin. "Genomic architecture of parallel ecological divergence: Beyond a single environmental contrast". Science Advances 5 12 (2019): eaav9963. https://doi.org/10.1126/sciadv.aav9963.
    Publicado • 10.1126/sciadv.aav9963
  30. Faria, Rui; Chaube, Pragya; Morales, Hernán E.; Larsson, Tomas; Lemmon, Alan R.; Lemmon, Emily Moriarty; Rafajlovic, Marina; et al. "Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes". Molecular Ecology 18 (2019): 1375-1393. http://dx.doi.org/10.1111/mec.14972.
    Acesso aberto • Publicado • 10.1111/mec.14972
  31. Kolora, Sree Rohit Raj; Weigert, Anne; Saffari, Amin; Kehr, Stephanie; Costa, Maria Beatriz Walter; Spröer, Cathrin; Indrischek, Henrike; et al. "Divergent evolution in the genomes of closely-related lacertids, Lacerta viridis and L. bilineata and implications for speciation". GigaScience 8 2 (2019): giy160. http://dx.doi.org/10.1093/gigascience/giy160.
    Acesso aberto • Publicado • 10.1093/gigascience/giy160
  32. Faria, Rui; Johannesson, Kerstin; Butlin, Roger K.; Westram, Anja M.. "Evolving Inversions". Trends in Ecology & Evolution 34 (2019): 239-248. http://dx.doi.org/10.1016/j.tree.2018.12.005.
    Acesso aberto • Publicado • 10.1016/j.tree.2018.12.005
  33. García-Souto, Daniel; Alonso-Rubido, Sandra; Costa, Diana; Eirín-López, José; Rolán-Álvarez, Emilio; Faria, Rui; Galindo, Juan; Pasantes, Juan. "Karyotype Characterization of Nine Periwinkle Species (Gastropoda, Littorinidae)". Genes 9 11 (2018): 517. http://dx.doi.org/10.3390/genes9110517.
    Acesso aberto • Publicado • 10.3390/genes9110517
  34. Westram, Anja M.; Rafajlovic, Marina; Chaube, Pragya; Faria, Rui; Larsson, Tomas; Panova, Marina; Ravinet, Mark; et al. "Clines on the seashore: The genomic architecture underlying rapid divergence in the face of gene flow". Evolution Letters 2 4 (2018): 297-309. http://dx.doi.org/10.1002/evl3.74.
    Acesso aberto • Publicado • 10.1002/evl3.74
  35. Faria, Rui; Triant, Deborah; Perdomo-Sabogal, Alvaro; Overduin, Bert; Bleidorn, Christoph; Santana, Clara Isabel Bermudez; Langenberger, David; et al. "Introducing evolutionary biologists to the analysis of big data: guidelines to organize extended bioinformatics training courses". Evolution: Education and Outreach 11 1 (2018): http://dx.doi.org/10.1186/s12052-018-0080-z.
    Acesso aberto • Publicado • 10.1186/s12052-018-0080-z
  36. Gazda, Malgorzata A; Andrade, Pedro; Afonso, Sandra; Dilyte, Jolita; Archer, John P; Lopes, Ricardo J; Faria, Rui; Carneiro, Miguel. "Signatures of Selection on Standing Genetic Variation Underlie Athletic and Navigational Performance in Racing Pigeons". Molecular Biology and Evolution 35 5 (2018): 1176-1189. http://dx.doi.org/10.1093/molbev/msy030.
    Publicado • 10.1093/molbev/msy030
  37. Ravinet, M.; Faria, R.; Butlin, R. K.; Galindo, J.; Bierne, N.; Rafajlovic, M.; Noor, M. A. F.; Mehlig, B.; Westram, A. M.. "Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow". Journal of Evolutionary Biology 30 8 (2017): 1450-1477. http://dx.doi.org/10.1111/jeb.13047.
    Acesso aberto • Publicado • 10.1111/jeb.13047
  38. Marques, João P.; Sotelo, Graciela; Larsson, Tomas; Johannesson, Kerstin; Panova, Marina; Faria, Rui. "Comparative mitogenomic analysis of three species of periwinkles: Littorina fabalis , L. obtusata and L. saxatilis". Marine Genomics 32 (2017): 41-47. http://dx.doi.org/10.1016/j.margen.2016.10.006.
    Publicado • 10.1016/j.margen.2016.10.006
  39. Pinho, Catarina; Faria, Rui. "Magadi tilapia ecological specialization: filling the early gap in the speciation continuum". Molecular Ecology 25 7 (2016): 1420-1422. http://dx.doi.org/10.1111/mec.13598.
    Acesso aberto • Publicado • 10.1111/mec.13598
  40. Carvalho, João; Sotelo, Graciela; Galindo, Juan; Faria, Rui. "Genetic characterization of flat periwinkles (Littorinidae) from the Iberian Peninsula reveals interspecific hybridization and different degrees of differentiation". Biological Journal of the Linnean Society 118 3 (2016): 503-519. http://dx.doi.org/10.1111/bij.12762.
    Publicado • 10.1111/bij.12762
  41. Kolora, Sree Rohit; Faria, Rui; Weigert, Anne; Schaffer, Stefan; Grimm, Annegret; Henle, Klaus; Sahyoun, Abdullah H.; et al. "The complete mitochondrial genome of Lacerta bilineata and comparison with its closely related congener L. Viridis". Mitochondrial DNA Part A 28 1 (2015): 116-118. http://dx.doi.org/10.3109/19401736.2015.1111349.
    10.3109/19401736.2015.1111349
  42. Sotelo, Graciela; Andree, Karl B.; López, Miguel A.; Alexandrino, Paulo; Gisbert, Enric; Faria, Rui. "The puzzling demographic history and genetic differentiation of the twaite shad (Alosa fallax) in the Ebro River". Conservation Genetics 15 5 (2014): 1037-1052. http://dx.doi.org/10.1007/s10592-014-0597-9.
    Publicado • 10.1007/s10592-014-0597-9
  43. Navarro, Arcadi; Faria, Rui. "Pool and conquer: new tricks for (c)old problems". Molecular Ecology 23 7 (2014): 1653-1655. http://dx.doi.org/10.1111/mec.12685.
    Acesso aberto • Publicado • 10.1111/mec.12685
  44. Faria, Rui; Renaut, Sebastien; Galindo, Juan; Pinho, Catarina; Melo-Ferreira, José; Melo, Martim; Jones, Felicity; et al. "Advances in Ecological Speciation: an integrative approach". Molecular Ecology 23 3 (2014): 513-521. http://dx.doi.org/10.1111/mec.12616.
    Acesso aberto • Publicado • 10.1111/mec.12616
  45. Carvalho, J.; Pereira, C.; Sotelo, G.; Costa, D.; Galindo, J.; Faria, R.. "De novo isolation of 17 microsatellite loci for flat periwinkles (Littorina fabalis and L. obtusata) and their application for species discrimination and hybridization studies". Journal of Molluscan Studies 81 3 (2014): 421-425. http://www.scopus.com/inward/record.url?eid=2-s2.0-84939545119&partnerID=MN8TOARS.
    Publicado • 10.1093/mollus/eyv014
  46. Nowick, Katja; Carneiro, Miguel; Faria, Rui. "A prominent role of KRAB-ZNF transcription factors in mammalian speciation?". Trends in Genetics 29 3 (2013): 130-139. http://dx.doi.org/10.1016/j.tig.2012.11.007.
    10.1016/j.tig.2012.11.007
  47. Elias, Marianne; Faria, Rui; Gompert, Zachariah; Hendry, Andrew. "Factors Influencing Progress toward Ecological Speciation". International Journal of Ecology 2012 (2012): 1-7. http://dx.doi.org/10.1155/2012/235010.
    Acesso aberto • Publicado • 10.1155/2012/235010
  48. Faria, Rui; Weiss, Steven; Alexandrino, Paulo. "Comparative phylogeography and demographic history of European shads (Alosa alosa and A. fallax) inferred from mitochondrial DNA". BMC Evolutionary Biology 12 1 (2012): 194. http://dx.doi.org/10.1186/1471-2148-12-194.
    Acesso aberto • Publicado • 10.1186/1471-2148-12-194
  49. Saura, M.; Faria, R.. "Genetic tools for restoration of fish populations". Journal of Applied Ichthyology 27 s3 (2011): 5-15. http://dx.doi.org/10.1111/j.1439-0426.2011.01834.x.
    Publicado • 10.1111/j.1439-0426.2011.01834.x
  50. Andree, K. B.; Angel Lopéz, M.; Alexandrino, P.; Faria, R.; Gisbert, E.. "A preliminary genetic analysis of a recently rediscovered population of the Twaite shad (Alosa fallax) in the Ebro river, Spain (Western Mediterranean)". Journal of Applied Ichthyology 27 s3 (2011): 21-23. http://dx.doi.org/10.1111/j.1439-0426.2011.01847.x.
    Publicado • 10.1111/j.1439-0426.2011.01847.x
  51. Faria, R.; Pinheiro, A.; Gabaldón, T.; Weiss, S.; Alexandrino, P.. "Molecular tools for species discrimination and detection of hybridization between two closely related Clupeid fishes Alosa alosa and A. fallax". Journal of Applied Ichthyology 27 s3 (2011): 16-20. http://dx.doi.org/10.1111/j.1439-0426.2011.01846.x.
    Publicado • 10.1111/j.1439-0426.2011.01846.x
  52. Locke, Devin P.; Hillier, LaDeana W.; Warren, Wesley C.; Worley, Kim C.; Nazareth, Lynne V.; Muzny, Donna M.; Yang, Shiaw-Pyng; et al. "Comparative and demographic analysis of orang-utan genomes". Nature 469 7331 (2011): 529-533. http://dx.doi.org/10.1038/nature09687.
    Publicado • 10.1038/nature09687
  53. Marigorta, Urko M; Lao, Oscar; Casals, Ferran; Calafell, Francesc; Morcillo-Suárez, Carlos; Faria, Rui; Bosch, Elena; et al. "Recent human evolution has shaped geographical differences in susceptibility to disease". BMC Genomics 12 1 (2011): http://dx.doi.org/10.1186/1471-2164-12-55.
    Acesso aberto • Publicado • 10.1186/1471-2164-12-55
  54. Faria, Rui; Navarro, Arcadi. "Chromosomal speciation revisited: rearranging theory with pieces of evidence". Trends in Ecology & Evolution 25 11 (2010): 660-669. http://dx.doi.org/10.1016/j.tree.2010.07.008.
    Publicado • 10.1016/j.tree.2010.07.008
  55. Alexandrino, P.; Faria, R.; Linhares, D.; Castro, F.; Le Corre, M.; Sabatié, R.; Baglinière, J. L.; Weiss, S.. "Interspecific differentiation and intraspecific substructure in two closely related clupeids with extensive hybridization, Alosa alosa and Alosa fallax". Journal of Fish Biology 69 sb (2006): 242-259. http://dx.doi.org/10.1111/j.1095-8649.2006.01289.x.
    10.1111/j.1095-8649.2006.01289.x
  56. Faria, R.; Weiss, S.; Alexandrino, P.. "A molecular phylogenetic perspective on the evolutionary history of Alosa spp. (Clupeidae)". Molecular Phylogenetics and Evolution 40 1 (2006): 298-304. http://dx.doi.org/10.1016/j.ympev.2006.02.008.
    Publicado • 10.1016/j.ympev.2006.02.008
  57. CORREIA, Alberto Teodorico; FARIA, Rui; ALEXANDRINO, Paulo; ANTUNES, Carlos; ISIDRO, Eduardo Jose; COIMBRA, Joao. "Evidence for genetic differentiation in the European conger eel Conger conger based on mitochondrial DNA analysis". Fisheries Science 72 1 (2006): 20-27. http://dx.doi.org/10.1111/j.1444-2906.2006.01111.x.
    10.1111/j.1444-2906.2006.01111.x
  58. Antunes, A.; Faria, R.; Johnson, W.E.; Guyomard, R.; Alexandrino, P.. "Life on the edge: The long-term persistence and contrasting spatial genetic structure of distinct brown trout life histories at their ecological limits". Journal of Heredity 97 3 (2006): 193-205. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745678018&partnerID=MN8TOARS.
    Publicado • 10.1093/jhered/esj014
  59. Santos, N.P.; Fontaínhas-Fernandes, A.A.; Faria, R.; Torres-Castro, L.F.; Anjos, M.R.; Cortes, R.M.V.; Alexandrino, P.. "Genetic evidence for limited introgression between wild and stocked individuals in Portuguese brown trout, Salmo trutta populations". Folia Zoologica 55 4 (2006): 433-443. http://www.scopus.com/inward/record.url?eid=2-s2.0-33846441639&partnerID=MN8TOARS.
    Publicado
  60. FARIA, R.; WALLNER, B.; WEISS, S.; ALEXANDRINO, P.. "Isolation and characterization of eight dinucleotide microsatellite loci from two closely related clupeid species (Alosa alosa and A. fallax)". Molecular Ecology Notes 4 4 (2004): 586-588. http://dx.doi.org/10.1111/j.1471-8286.2004.00745.x.
    Publicado • 10.1111/j.1471-8286.2004.00745.x
  61. Antunes, Agostinho; Faria, Rui; Weiss, Steven; Alexandrino, Paulo. "Complex evolutionary history in the brown trout: insights on the recognition of conservation units.". Conservation Genetics 2 4 (2001): 337-347. http://dx.doi.org/10.1023/a:1012518112891.
    Publicado • 10.1023/a:1012518112891
Capítulo de livro
  1. Westram, AM; Faria, Rui; Butlin, Roger; Johannesson, J. "Inversions and evolution". In Encyclopedia Life Sciences - eLS. 2020.
    Publicado
  2. Jackson, B.; Butlin, R.; Navarro, A.; Faria, R.. "Chromosomal Rearrangements and Speciation". In Encyclopedia of Evolutionary Biology, editado por Richard Kliman, 149-158. Elsevier, 2016.
    Publicado
  3. Afonso, D; Faria, Rui. "Darwinismo social". In Um livro sobre evolução., editado por Campos, R. CIBIO: Research Center in Biodiversity and Genetic Resources, 2013.
    Publicado
  4. Faria, Rui; Neto, Sandra; Noor, Mohamed AF; Navarro, Arcadi. "Role of Natural Selection in Chromosomal Speciation". In eLS- Encyclopedia Life Sciences. John Wiley & Sons, Ltd, 2011.
    Publicado • 10.1002/9780470015902.a0022850
  5. Faria, Rui; Navarro, A.. "On The Role of Natural Selection in Chromosomal Speciation". In Evolución y Adaptación. 150 años después del Origen de las Especies, editado por Navarro A.; Dopazo, H., 123-132. Espanha: Sociedad Española de Biología Evolutiva, 2009.
    Publicado
Edição de número de revista
  1. Faria, Rui; Stankowski, Sean; Johannesson, Kerstin. "Special issue on Speciation in Marine Environments (Main editor)". Journal of Evolutionary Biology 34 1 (2021): https://onlinelibrary.wiley.com/toc/14209101/2021/34/1.
    Publicado • https://onlinelibrary.wiley.com/toc/14209101/2021/34/1 • Editor
  2. Elias, Marianne; Faria, Rui; Gompert, Zachariah; Hendry, Andrew. "Special issue on Ecological Speciation". International Journal of Ecology (2012): https://www.hindawi.com/journals/ijecol/si/213683/.
    Publicado • Co-editor
Poster em conferência
  1. Faria, Rui. "Author of more than 60 posters presented at multiple conferences between 2001 and 2024 (complete list: https://rmigueldefaria.wixsite.com/farialab-1/communications). Below I list some posters I presented since 2011.". 2024.
    (multiple)
  2. Pierre Barry; Aurélien De Jode; Alfonso Balmori; Francesca Raffini; James Reeve; Anja Westram; Juan Galindo; et al. "Understanding the role of chromosomal inversions in reproductive isolation across the speciation continuum in Iberian Littorina saxatilis.". Trabalho apresentado em Gordon Conference in Speciation, 2023.
  3. Pierre Barry; Alfonso Balmori; Isabel Monreal; Maria Magalhães; Aurélien De Jode; Francesca Raffini; James Reeve; et al. "The role of chromosomal inversions in reproductive isolation across the speciation continuum in Littorina saxatilis.". Trabalho apresentado em XIX National meeting of the Portuguese Association for Evolutionary Biology, 2023.
  4. Faria, Rui; Aurélien De Jode; Francesca Raffini; James Reeve; Pierre Barry; Alfonso Balmori; Anja Westram; et al. "The evolutionary significance of chromosomal rearrangements in adaptation and speciation". Trabalho apresentado em IV IMPSG - INTERNATIONAL MEETING OF THE PORTUGUESE SOCIETY OF GENETICS, 2023.
  5. Pedro Andrade; José Marques; André Pires; Roger Butlin; Kerstin Johannesson,; Emílio Rolán-Alvarez; Miguel Carneiro; Juan Galindo; Rui Faria. "Is shell colour polymorphism in Littorina marine gastropods associated with chromosomal inversions?". Trabalho apresentado em ESEB 2022, 2022.
  6. Pedro Andrade; José Marques; André Pires; Maria Magalhães; Roger Butlin; Kerstin Johannesson; Emílio Rolán-Alvarez; et al. "Is shell colour polymorphism in Littorina marine gastropods associated with chromosomal inversions?". Trabalho apresentado em TiBE 2022- The Biology of Colour, 2022.
  7. Pedro Andrade; José Marques; André Pires; Maria Magalhães; Roger Butlin; Kerstin Johannesson; Emílio Rolán-Alvarez; et al. "Is shell colour polymorphism in Littorina marine gastropods associated with chromosomal inversions?". Trabalho apresentado em XVIII Encontro Nacional de Biologia Evolutiva, 2022.
  8. Faria, Rui; Anja Westram; Sean Stankowski; Kerstin Johannesson; Roger Butlin. Autor correspondente: Faria, Rui. "Comparing direct measures of reproductive isolation with genetic patterns: Insights from Littorina.". Trabalho apresentado em ESEB satellite symposium, 2021.
  9. Marques, José; Galindo, Juan; Costa, Diana; Afonso, Sandra; Rolán-Álvarez, Emilio; Carneiro, Miguel; Faria, Rui. "Genetic and evolutionary basis of shell coloration in two sister species of marine snails, Littorina fabalis and L. obtusata". Trabalho apresentado em XV National Meeting of Evolutionary Biology, 2019.
  10. Costa, Diana; Sotelo, Graciela; Kaliontzopoulou, Antigoni; Carvalho, João; Butlin, RK; Hollander, Johan; Faria, Rui. "Hybridization between two marine snails, Littorina fabalis and L. obtusata". Trabalho apresentado em XV National Meeting on Evolutionary Biology (ENBE), 2019.
  11. Faria, Rui; Anja M. Westram; Pragya Chaube; Hernan Morales; Francesca Raffini; Sean Stankowski; Katherine Hearn; et al. Autor correspondente: Faria, Rui. "Littorina saxatilis: a model to study the role of chromosomal inversions in adaptation and speciation.". Trabalho apresentado em Pearls of wisdom: synergising leadership and expertise in molluscan genomics., 2019.
  12. Carvalho, João; Morales, Hernán; Faria, Rui; Butlin, RK; Sousa, Vitor. "Genomics of ecotype formation in Littorina saxatilis". Trabalho apresentado em Encontro FCT Ciência, 2018.
  13. Faria, Rui; Costa, Diana; Sotelo, Graciela; Kaliontzopoulou, Antigoni; Reid, David; Bianchi, G.; Westram, Anja; et al. "Hybridization patterns between sister-species of marine periwinkles (Gastropoda)". Trabalho apresentado em The Gordon Research Conference (GRC) on Speciation 2017, 2017.
  14. Costa, Diana; Sotelo, Graciela; Kaliontzopoulou, Antigoni; Butlin, Roger; Hollander, Johan; Faria, Rui. "Hybridization patterns between sister-species of flat periwinkles (Gastropoda) in Iberia". Trabalho apresentado em The 50th Population Genetics Group (POPGROUP50), 2017.
  15. Carvalho, João; Galindo, Juan; Sotelo, Graciela; Costa, Diana; Faria, Rui. "Ecologically driven divergence between multiple populations of the marine snail Littorina fabalis". Trabalho apresentado em Congress of the European Society for Evolutionary Biology (ESEB 2015), 2015.
  16. Carvalho, João; Galindo, Juan; Sotelo, Graciela; Costa, Diana; Faria, Rui. "The paths of parallel evolution in Littorina fabalis and their genetic crossroads". Trabalho apresentado em Gordon Research Conference on Speciation, 2015.
  17. Abrunheiro, Sofia; Sotelo, Graciela; Costa, Diana; Faria, Rui. "Study of ecological adaptation in Littorina fabalis". Trabalho apresentado em Investigação Jovem na da Universidade do Porto (IJUP), 2014.
  18. Sotelo, Graciela; Costa, Diana; Duveport, Marten; Panova, Marina; Johannesson, Kerstin; Faria, Rui. "Phylogeographic history of the flat periwinkles, Littorina fabalis and L. obtusata". Trabalho apresentado em European Society for Evolutionary Biology (ESEB 2013), 2013.
  19. Varela, Susana; Marçal, Raquel; Altenrath, Christine; Carvalho, João; Costa, Diana; Lago, Teresa; Galindo, Juan; Rolán-Álvarez, Emilio; Faria, Rui. "Habitat choice in the flat periwinkle (Littorina fabalis) Iberian ecotypes: an experimental approach". Trabalho apresentado em European Society for Evolutionary Biology (ESEB 2013), 2013.
  20. Galindo, Juan; Carvalho, João; Pereira, Carolina; Kempainnen, Petri; Sotelo, Graciela; Faria, Rui. "Ecologically driven morphological and genetic divergence between sheltered and exposed populations of the marine snail Littorina fabalis". Trabalho apresentado em Congress of the European Society for Evolutionary Biology (ESEB 2013), 2013.
  21. Sotelo, Graciela; Costa, Diana; Carvalho, João; Pereira, Carolina; Abrunheiro, Sofia; Varela, Susana; Kemppainen, Petri; Galindo, Juan; Faria, Rui. "The paths of parallel evolution in the flat periwinkles: preliminary results". Trabalho apresentado em Speciation2013-Frospects, 2013.
  22. Sotelo, Graciela; Costa, Diana; Carvalho, João; Pereira, Carolina; Abrunheiro, Sofia; Varela, Susana; Kemppainen, Petri; Galindo, Juan; Faria, Rui. "The paths of parallel evolution in the flat periwinkles (work in progress)". Trabalho apresentado em Advances in Ecological Speciation (AES), 2013.
  23. Costa, Diana; Sotelo, Graciela; Lago, Teresa; Varela, Susana; Faria, Rui. "Genetic and morphological differentiation between Littorina fabalis ecotypes in Iberian Peninsula: preliminary results". Trabalho apresentado em TIBE2012 ¿ Trends in Biodiversity and Evolution, 2012.
  24. Carvalho, João; Altenrath, Christine; Costa, Diana; Faria, Rui; Varela, Susana. "The role of habitat choice in ecotype formation in the flat periwinkle Littorina fabalis: an experimental approach". Trabalho apresentado em National Congress of Ethology, 2012.
  25. Altenrath, Christine; Costa, Diana; Varela, Susana; Faria, Rui. "The role of habitat choice in ecotype formation in the flat periwinkle Littorina fabalis: preliminary results". Trabalho apresentado em TIBE2011 ¿ Trends in Biodiversity and Evolution, 2011.
Tese / Dissertação
  1. Faria, Rui. "Study of evolutionary processes and phylogeography in European species of the genus Alosa, based on molecular markers". Doutoramento, Universidade do Porto Faculdade de Ciências, 2007.
Tradução
  1. Faria, Rui. Adventures in archaeological sciences (Colouring Book for Kids). 2018.
    Publicado
Website
  1. Faria, Rui. Rui Faria - Evolution. 2018. https://rmigueldefaria.wixsite.com/farialab-1/.
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2022 Solving the mystery of one of the most misidentified marine organism in the world (seminar at MAPAS. CITEXVI, University of Vigo, Spain) Seminar series
MAPAS. CITEXVI, University of Vigo
2022 Whole-genome sequencing across the intertidal gradient reveals strong reproductive isolation between Spanish Littorina saxatilis ecotypes  (SESBE 2022) VIII SPANISH SOCIETY OF EVOLUTIONARY BIOLOGY CONFERENCE
University of Vigo (Espanha)
2021 Presented 18 oral communications (non-invited), including : 2023, XIII ISOLBE, Portugal; 2018. PopGroup51, Bristol, UK; 2017. XII Intern. Symp. on Littorinid Biology and Evolution, Sweden 2012. First Joint Congress Evolution-ESEB, Canada; 2010. Frontiers of Speciation. Evolution of reproductive isolation: models and empirical evidence, Czech Republic; 2007. XII European congress of Ichthyology, Croatia; 2004. European Soc. Evolutionary Biology conference, Poland. Complete list: https://rmigueldefaria.wixsite.com/farialab-1/communications. Multiple
Multiple
2021 Adaptation and Speciation on the beach: solving the mystery of one of the most misidentified marine organisms in the world (seminar in CE3C, University of Lisbon, Portugal) Encontros Scientia
CE3C
2021 Adaptation and Speciation on the beach: solving the mystery of one of the most misidentified marine organisms in the world (seminar at Research Centre for Experimental Marine Biology and Biotechnology, Plentzia Marine Station, University of the Basque country, Spain) seminar series
Research Centre for Experimental Marine Biology and Biotechnology, Plentzia Marine Station, University of the Basque country, Spain (Espanha)
2021 The role of inversions in diversification of Littorina intertidal gastropods (seminar at the University of Bodo, Norway) seminar series
University of Bodo (Noruega)
2019/03 Speciation Genomics (invited - 8 editions from 2012 to 2019) Programming for Evolutionary Biology Course
Freie University Berlin (Berlin, Alemanha)
2015 Finding islands of divergence on raising sea levels (invited) Seminar Series
Museu Nacional de Ciências Naturais (Madrid, Espanha)
2014 Genómica e a Origem das Espécies (invited) II AEICBAS Biomedical Congress. ICBAS, Porto, Portugal
AEICBAS (Porto, Portugal)
2014 Diversification in flat periwinkles: genotypes, phenotypes and processes (invited) 16th Portugaliae Genetica international conference – Evolution @ interacting levels: from molecules to populations.
IPATIMUP (Porto, Portugal)
2012 The genetic mechanisms of parallel evolution in Littorina fabalis and L. obtusata (invited) Seminar series
Universidade de Vigo (Vigo, Espanha)
2012 Mechanisms of speciation: lessons from aquatic organisms (invited) Seminar Series
CIIMAR (Porto, Portugal)
2011 How repeatable is evolution? Lessons from marine snails (L. fabalis and L. obtusata) (invited) Cafe com Sal - seminar series
Seminar at ECIMAT (Marine Sciences Station of Toralla, Univ. Vigo) (Vigo, Espanha)
2011 Chromosomal speciation: theoretical models and empirical evidence (invited) Seminar Series
University of Leipzig (Alemanha)
2011 Chromosomal speciation: theoretical models, empirical evidence and model organisms (invited) 14th Portugaliae Genetica international conference – Model Organisms: humans et al.
IPATIMUP (PORTO, Portugal)
2007 Genetic tools for fish conservation (invited) International Workshop on the Restoration of Fish Populations
LIFE PROJECT SHADS (Dusseldorf, Alemanha)
2007 Comparative phylogeography of Eurasian shads (Alosa spp.) (invited) Seminar series
IRTA (Research and Technology Food and Agriculture) (Tarragona, Espanha)

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2022 - 2025 Postdoc in the project "The role of chromosomal inversions in adaptation and reproductive isolation across the speciation continuum"
Orientador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2023 - 2024 Technician in the project- Evolution on our heads: disentangling mechanisms of diversification in human lice
Orientador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2022 - 2024 Postdoc on the project - The role of chromosomal inversions in adaptation and reproductive isolation across the speciation continuum
Orientador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2022 - 2024 Technician in the project - The role of chromosomal inversions in adaptation and reproductive isolation across the speciation continuum- INVcontinuum
Orientador
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2019 - 2024 Exploration of inversions in the Rough Perriwinkle (Littorina saxatilis).
Coorientador
Göteborgs Universitet, Suécia
2018 - 2024 Genomics of ecotype formation: interplay between demographic processes and natural selection
Coorientador de Joao Carvalho
Biodiversity, Genetics & Evolution (Doutoramento)
Universidade de Lisboa Faculdade de Ciências, Portugal
2018 - 2024 Genomics of ecotype formation: interplay between demographic processes and natural selection
Coorientador
Universidade de Lisboa Centro de Ecologia Evolução e Alterações Ambientais, Portugal
2022 - 2023 Study of evolutionary processes in intertidal species of the genus Littorina
Orientador
2021/10 - 2022 Shell shape evolution of the marine gastropod Littorina obtusata across an environmental gradient at high latitudes
Orientador
Universidade do Porto Faculdade de Ciências, Portugal
2019 - 2020 Technician fellow on the project "Hybridization between flat periwinkles"
Orientador de Diana Costa
Technician (Outra)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2017 - 2018 Testing for divergent selection on putative chromosomal inversions in Littorina saxatilis
Coorientador de Sam Fenton
Biology (Mestrado)
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2013 - 2018 Accelerated evolution in Chromosomal rearrangements and Speciation in Lacertid lizards
Coorientador de Rohit Kolora
Bioinformatics (Doutoramento)
Universität Leipzig, Alemanha
2014 - 2016 Insights into the extent of hybridization between flat periwinkles in the Iberian Peninsula
Orientador de Diana Costa
Master in Biodiversity, Genetics and Evolution (Mestrado)
Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2016 Supervision of a postdoctoral fellow working on “Genomic architecture of speciation: the role of chromosomal rearrangements” funded by VolkswagenStiftung
Orientador de Graciela Sotelo
Postdoc (Outra)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013 - 2014 Characterization of environmental parameters across the distribution range of Littorina fabalis ecotypes
Orientador de Sofia Abrunheiro
Internship (Biology Degree) (Iniciação científica)
Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2014 Understanding the evolution of the mitochondrial genome: a comparative genomics approach
Coorientador de Andreia Carvalho
Master in Biodiversity, Genetics and Evolution (Mestrado)
Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2014 Study on the diversification of flat periwinkles (Littorina fabalis and L. obtusata): insights from genetics and geometric morphometrics
Orientador de Joao Carvalho
Master in Evolution and Development (Mestrado)
Universidade de Lisboa Faculdade de Ciências, Portugal
2012 - 2014 Technician fellow on the project “The paths of parallel evolution and their genetic crossroads”
Orientador de Graciela Sotelo
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2012 - 2012 Evolutionary ecology of L. fabalis ecotypes in the Iberian Peninsula
Orientador de Ana Marçal
Programa Da Vinci (4 months research project) (Outra)
Universidade de Aveiro, Portugal
2011 - 2012 Technician fellow on the project -The paths of parallel evolution and their genetic crossroads-
Orientador de Teresa Lagos
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2012 A trial of karyotypic microdissection as an enrichment pathway for next-generation sequencing
Coorientador de Tiago Carvalho
Master in Biodiversity, Genetics and Evolution (Mestrado)
Universidade do Porto Faculdade de Ciências, Portugal
2010 - 2011 Study of the phylogeographic context of speciation in Littorina obtusata and L. fabalis based on molecular markers
Orientador de Diana Costa
Internship (Biology Degree) (Iniciação científica)
Universidade do Porto Faculdade de Ciências, Portugal
2009 - 2010 Genomic distribution of gene expression differences between primate species: the importance of chromosomal rearrangements
Orientador de Sandra Neto
Universidade do Porto Faculdade de Ciências, Portugal

Organização de evento

Nome do evento
Tipo de evento (Tipo de participação)
Instituição / Organização
2023 - 2023 XIII ISOLBE: International Symposium on Littorinid Biology and Evolution. Vila do Conde, Portugal (2023 - 2023)
Conferência (Presidente da Comissão Organizadora)
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
2022 - 2023 WORKSHOP on Eco-evolutionary dynamics during environmental change (2022 - 2023)
Oficina (workshop) (Presidente da Comissão Organizadora)
2019 - 2019 Co-organization of the annual conference of the Portuguese Society for Evolutionary Biology (2019 - 2019)
Conferência (Coorganizador)
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2018 - 2018 Marine Evolution conference, Strömstad, Univ. of Gothenburg, Sweden. Organized a symposium on Marine Speciation (2018 - 2018)
Simpósio (Outra)
Göteborgs Universitet, Suécia
2018 - 2018 Organization of the outreach initiative "Speciation at your beach" (we presented the local L. saxatilis ecotypes to people visiting a rocky beach in Thorwnick UK, aiming to stimulate their evolutionary thinking) (2018 - 2018)
Exposição (Presidente da Comissão Organizadora)
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2017 - 2018 Co-organizer of the "Ecology, Evolution & Environment" seminar series. University of Sheffield, UK. (2017 - 2018)
Seminário (Coorganizador)
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2012 - 2017 Co-organization of “Programming for Evolutionary Biology” extended course (five editions) held at the Univ. of Leipzig, Germany (http://evop.bioinf.uni-leipzig.de/?page_id=11) (2012 - 2017)
Oficina (workshop) (Coorganizador)
Universität Leipzig, Alemanha
2012 - 2016 Creator of the Summer School/Course "Programming for Evolutionary Biology" and co-organizer of the 5 first editions (2012-2016) (2012 - 2016)
Oficina (workshop) (Coorganizador)
Universität Leipzig, Alemanha
2015 - 2015 Organization of a Symposium "Charting the genomic landscape of speciation" at the European Society for Evolutionary Biology (ESEB) conference, Lausanne, Switzerland (2015 - 2015)
Simpósio (Coorganizador)
Universite de Lausanne, Suiça
2015 - 2015 Organization of the Conference: “Programming for Evolutionary Biology (PEB 2015)”, CIBIO, Portugal (2015 - 2015)
Conferência (Presidente da Comissão Organizadora)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013 - 2013 Organization of the symposium "Genomic Islands: their role in adaptation and speciation" at ESEB 2013. Lisbon, Portugal (2013 - 2013)
Simpósio (Coorganizador)
Universidade de Lisboa Faculdade de Ciências, Portugal
2013 - 2013 Organization of the international conference: “Advances in Ecological Speciation”. CIBIO, Portugal (2013 - 2013)
Conferência (Presidente da Comissão Organizadora)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2011 - 2013 Organiser of the weekly seminar series in Biodiversity and Evolution. CIBIO, Porto. (2011 - 2013)
Seminário (Coorganizador)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2012 Founder and main organizer of the “Genomics Gang”, weekly meeting discussions in Genomics. CIBIO, Porto. (2010 - 2012)
Encontro (Presidente da Comissão Organizadora)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2011 - 2011 Organizer the "First-like” - Faculty Institutes for Reforming Science Teaching (FIRST) IV Workshop" at CIBIO, Portugal (2011 - 2011)
Oficina (workshop) (Outra)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2011 - 2011 Host organizer “The Bioinformatics Roadshow - Porto” workshop at CIBIO, Portugal (in collaboration with the European Bioinformatics Institute (EMBL-EBI)) (2011 - 2011)
Oficina (workshop) (Outra)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2011 Organizer of the student seminar series (for MSc and PhD students). CIBIO, Porto (2010 - 2011)
Seminário (Coorganizador)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2010 Organization of the international conference "Trends in Biodiversity and Evolution”. CIBIO, Portugal. (2010 - 2010)
Conferência (Presidente da Comissão Organizadora)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2009 - 2009 Participation in the organisation of the Barcelona Biomedical Research Park’s (PRBB) open­ day (Barcelona, Spain) dedicated to Charles Darwin. (2009 - 2009)
Exposição (Membro da Comissão Organizadora)
Parc de Recerca Biomèdica de Barcelona, Espanha
2008 - 2008 Organization of the “Introduction to database querying” workshop. (2008 - 2008)
Oficina (workshop) (Presidente da Comissão Organizadora)
Instituto de Biología Evolutiva, Espanha
2008 - 2008 Participation in the organization of Scientific Cafes (scientific discussions held in Barcelona's Cafe). Organised by PhD students and Post­docs of the “Science Meets Society” from PRBB, Spain. (2008 - 2008)
Mesa-redonda (Membro da Comissão Organizadora)
Centre de Regulació Genòmica, Espanha

Participação em evento

Descrição da atividade
Tipo de evento
Nome do evento
Instituição / Organização
2024 - 2024 Small scientific demonstration (hands on) about scientists in the pre-school (children from 3 to 5 years old) from APPC, Gondomar.
2023 - 2023 Small scientific demonstration (hands on) about ocean acidification for children-teenagers from APPC, Gondomar.
2023 - 2023 Small talk about scientists in the elementary school (children from 6 to 7 years old) at Escola da Arroteia, Valbom, Gondomar.
2022 - 2022 ESEB Progress Meeting on Disentangling neutral versus adaptive evolution in chromosomal inversions (workshop to prepare a target review in JEB)
Encontro
ESEB Progress Meeting on ‘Disentangling neutral versus adaptive evolution in chromosomal inversions’
Göteborgs Universitet, Suécia
2022 - 2022 Participation Showcase/Workshop for children at Parque Biológico de Gaia, Escola de Ciência Viva, Gaia, Portugal (about the biodiversity in rocky shores)
Exposição
2022 - 2022 Showcase for children between 11 and 13 years old in the school “Agrupamento de Escolas Dom Pedro IV”, Mindelo about the ocean biodiversity, evolution and threats), Vila do Conde (Hands on).
Exposição
2019/09 - 2021/03 Translation of the subtitles of a scientific animated video on speciation on the beach
Outro
Outreach
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2021 - 2021 Participation on the Europeans Researchers Night initiative named "Science in the Castle" at Forte de S. João Baptista, Porto, Portugal (introduction to the origin of species using marine snails as models)
Exposição
2021 - 2021 Small scientific demonstration (hands on) about ocean acidification in the pre-school (kids of 5 years old) from APPC, Gondomar.
2019 - 2019 Invited talk at Parque Biologico de Gaia (Escola Ciencia Viva - Conversa com Cientista) where I explained my research to a kids from elementary school
Seminário
Parque Biologico de Gaia (Escola Ciencia Viva)
2018 - 2018 Contribution to the Evolution Letters blog about one of our manuscripts in Littorina saxatilis: "Speciation on the beach: solving the mystery of the most misidentified marine organism in the world"
Outro
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2017 - 2018 Discovery night at the Animal and Plant Sciences Department, University of Sheffield. (activities about adaptation using Littorina saxatilis as model)
Exposição
Discovery night
The University of Sheffield Department of Animal and Plant Sciences, Reino Unido
2016 - 2016 Participation in the initiative "AMBIENTAR­-SE" (invited speaker), where I discussed the movie "The age of stupid" and the impact of climate change (Organized by Vento Norte, Famalicao, Portugal). AMBIENTAR­-SE: The age of stupid
Vento Norte (ONG), Portugal
2013 - 2014 Participation in the initiative Ciencia Viva in Summer under the topic: "evolution in colours", which intended to foster the understanding about the process of natural selection and its contribution to the emergence of new species
Exposição
Ciencia Viva in Summer
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013 - 2013 Invited talk at Serralves (Modern art museum, Porto, Portugal) within the outreach initiative "Cafe com Ciencia" (coffee with science) where I explained my research to a general audience
Outro
Cafe com Ciencia
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2012 - 2013 Participation in the initiative "A book about evolution". Edited by Rita Campos (CIBIO/InBIO) and funded by the European Society for Evolutionary Biology. Educational book in a Q&A format about evolution (http://umlivrosobreevolucao.blogspot.pt/). Role: member of the jury and co­author of one chapter.
Outro
A book about evolution
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2011 - 2011 Invited Lecture at Infante D. Henrique­¿ for high­ school students (Braga, Portugal) on the topic: Scientific method. Scientific method
Infante D. Henrique­ , Portugal

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2024 Member of the thesis evaluation committee of the PhD student Paulo Pereira. University of Porto, Portugal.
Arguente
Paulo Pereira (Doutoramento)
Universidade do Porto Faculdade de Ciências, Portugal
2022 Member of the thesis evaluation committee of the PhD student Nina Séren. University of Porto, Portugal.
Arguente
Nina Séren (Doutoramento)
2022 Member of the thesis evaluation committee (main opponent) of the master student Bernardo Lima. University of Porto, Portugal.
Arguente principal
Bernardo Lima (Mestrado)
2022 Member of the thesis evaluation committee (main opponent) of the master student João Souto. University of Porto, Portugal
Arguente principal
João Souto (Mestrado)
2018 Causes of colour polymorphism in natural populations of Littorina fabalis
Vogal
Daniel Estevez Barcia (member of the monitoring committee) (Doutoramento)
Universidade de Vigo - Campus Lagoas Marcosende, Espanha
2018 Análisis genético de los polimorfismos morfológico y cariológico en poblaciones gallegas de Nucella lapillus (L) (member of the monitoring committee)
Vogal
Jonathan Fernández Rodríguez (Doutoramento)
Universidade de Vigo - Campus Lagoas Marcosende, Espanha
2016 Hybridization signals in Fucus diversification
Arguente principal
Susana Almeida (Mestrado)
Universidade do Porto Faculdade de Ciências, Portugal
2014 Understanding the impact of chromosomal inversions on the evolution of the human genome (main examiner)
Arguente principal
João Alves (Doutoramento)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2014 Consequences of chromosome structure polymorphism in sexual populations (main examiner)
Arguente principal
Maria Silva (Mestrado)
Universidade de Lisboa Faculdade de Ciências, Portugal
2013 Identificación de factores de la anadromía en trucha (Salmo trutta) y su aplicación a la conservación (member of the committee)
Vogal
Marco Rius (Doutoramento)
Universidade de Vigo - Campus Lagoas Marcosende, Espanha
2012 The genetic basis of lifespan in Drosophila americana
Arguente principal
Helder Henrique Ribeiro Rocha (Mestrado)
Universidade de Aveiro, Portugal
2011 Assessing domestication centers using mtDNA
Arguente principal
Rui Oliveira (Mestrado)
Universidade do Porto Faculdade de Ciências, Portugal
2009 Insights into the role of differential gene expression on the ecological adaptation of the snail Littorina saxatilis (member of the committee)
Vogal
Mónica Martínez-Fernández (Doutoramento)
Universidade de Vigo, Espanha

Arbitragem científica em conferência

Nome da conferência Local da conferência
2023 - 2023 XIII ISOLBE conference BIOPOLIS-CIBIO
2023 - 2023 XIX ENBE conference ISA
2022 - 2022 TiBE 2022 - THE BIOLOGY OF COLOUR BIOPOLIS-CIBIO
2019/10 - 2019/10 XV conference of the Portuguese Society for Evolutionary Biology CIIMAR
2015 - 2015 XI conference of the Portuguese Society for Evolutionary Biology Faculdade de Ciencias e Tecnologia da Universidade Nova de Lisboa
2013 - 2013 IX conference of Portuguese Society for Evolutionary Biology Instituto Gulbenkian de Ciencia
2011 - 2011 VII conference of the Portuguese Society of Evolutionary Biology Universidade de Coimbra

Arbitragem científica em revista

Nome da revista (ISSN) Editora
2019/03/01 - 2024 Heredity (Associate Editor) Springer Nature
2019/06 - 2020 Journal of Evolutionary Biology. Guest editor of a special issue on Speciation in Marine Environments
2011 - 2012 International Journal of Ecology. Guest co-editor of a special issue on Ecological Speciation

Curso / Disciplina lecionado

Disciplina Curso (Tipo) Instituição / Organização
2012 - Atual Lecturer on “Phylogenomics" - Course “Programming for Evolutionary Biology”, University of Leipzig, Germany. Course ¿Programming for Evolutionary Biology Universität Leipzig, Alemanha
2024 - 2024 Human Biology - Faculty of Sciences University of Porto (invited Assistant Professor) (Bacharelato) Universidade do Porto Faculdade de Ciências, Portugal
2015 - 2016 Lecturer on the Course on “Phylogeography, Population Genetics and Genomics” for PhD students of the PGCD (Graduate Programme Science for Development) at the University of Cabo Verde, Praia, Cabo Verde (2 editions) Phylogeography, Population Genetics and Genomics (1 week course) (Doctor) Universidade de Cabo Verde, Cabo Verde
2015 - 2015 Lecturer on "Population Genomics without big funding - Course “Programming for Evolutionary Biology”, University of Leipzig, Leipzig, Germany Course ¿Programming for Evolutionary Biology Universität Leipzig, Alemanha
2014 - 2014 Lecturer on Population Genomics - Course Programming for Evolutionary Biology (special edition in Colombia) Course ¿Programming for Evolutionary Biology Universidade Nacional de Colombia, Colômbia
2013 - 2013 Lecturer on High throughput sequencing (developments and applications). Course: Molecular methods in the analysis of biological diversity of the MSc on Biodiversity and Genetic Resources at CIBIO, University of Porto, Portugal Molecular methods in the analysis of biological diversity (1 week course) (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal
2008 - 2008 Lecturer on “Introduction to database querying” - workshop on “Ensemble and Biomart” at Pompeu Fabra University, Barcelona, Spain. Introduction to database querying” workshop (1,5 days duration) Universitat Pompeu Fabra, Espanha
2004 - 2006 Teaching assistant of Molecular methods applied to the analysis of biological diversity in the MSc on Biodiversity and Genetic Resources at CIBIO, University of Porto, Portugal (3 editions) Molecular methods applied to the analysis of biological diversity (Mestrado) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2005 - 2005 Lecturer on Genetics at the Faculty of Sciences of the University of Porto, Portugal (1 semester) Genetics (Licenciatura) Universidade do Porto Faculdade de Ciências, Portugal

Membro de associação

Nome da associação Tipo de participação
2023 - 2024 Portuguese Association for Evolutionary Biology (Vice-President) Vice-President
2019 - 2024 Genetics Society Regular member
2011 - 2024 Portuguese Society for Evolutionary Biology Associate
2004 - 2024 European Society for Evolutionary Biology Associate
2011 - 2012 Portuguese Society for Evolutionary Biology (founder and secretary) Founder and Secretary

Outro júri / avaliação

Descrição da atividade Instituição / Organização
2007 - Atual Ad hoc reviewer for the following journals: Evolution; Heredity; Conservation Genetics; Molecular Ecology; Biological Journal of the Linnean Society; J. of Molluscan Studies; Trends in Ecology & Evolution; Nature Communications; Nature Ecology and Evolution; PNAS; Frontiers in Genetics; Proceedings of the Royal Society B: Biological Sciences; J. of Heredity; Molecular Phylogenetics & Evolution; BMC Evolutionary Biology; J. of Applied Ecology; Marine Biology; Canadian J. Fisheries; J. Fish Biology; Plos Genetics; Journal of Evolutionary Biology,etc
2024 - 2024 Jury member of the prize Maynard Smith from ESEB European Society for Evolutionary Biology, Alemanha
2023 - 2023 Reviewer of a research project for the Polish National Science Centre Polish National Science Centre, Polónia
2022 - 2022 Reviewer of a research project for the Leverhulme Trust, United Kingdom
2022 - 2022 Reviewer of a research project for the ERC Starting Grant, European Commission
2022 - 2022 Reviewer for the Czech Science Foundation Grantová agentura Ceské republiky, República Checa
2021 - 2021 Reviewer of a research project for the Swiss National Science Foundation (Eccellenza programme)
2020 - 2020 Member of the Juri that evaluated the candidates of the PhD BYT program at the Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Portugal. Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2014 - 2015 Reviewer of a research project for the Polish National Science Centre Polish National Science Centre, Polónia
2013 - 2013 Reviewer of a research project for the Czech Science Foundation Grantová agentura Ceské republiky, República Checa